Data from Lunardon et al. (2020)
Data from Lunardon et al. (2020)Version 0.1 assembly of Cuscuta campestris isolate 'doddi' described in Shahid et al. 2018
Click links below to show sub-sets of annotations
| ShortStack | Shahid_et_al_2018 | |
| MIRNA | 86 | 37 |
| nearMIRNA | 51 | 0 |
| siRNA20 | 13 | 0 |
| siRNA21 | 690 | 1 |
| siRNA22 | 7,174 | 1 |
| siRNA23 | 725 | 0 |
| siRNA24 | 109,005 | 0 |
| OtherRNA | 11,608 | 4 |
| NotExpressed | 0 | 0 |
| accession | aligned reads | unaligned reads | source db | is refset? Alignments that are reference sets (value of 1) are mergers of other component libraries used to compile master small RNA annotations for a species. | tissue | ecotype / cultivar | genotype | replicate id Alignments that are biological replicates have the same replicate ids | refset id If set, the alignment is part of the indicated reference set | description |
|---|---|---|---|---|---|---|---|---|---|---|
| ccm-b0.1r1 | 73,707,711 | 8,498,692 | x | 1 | mixed | doddi | wild-type | ref | 1 | Reference set - merge of 8 libraries |