Data from Lunardon et al. (2020)

Annotations viewer

Genome

Cuscuta campestris (Field Dodder) genome build 0.1 (ccm-b0.1)

Version 0.1 assembly of Cuscuta campestris isolate 'doddi' described in Shahid et al. 2018

Locus type

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Annotation source

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Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
ccm-b0.1r1-134328	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig0:12910-13278	.	44	0.54	AGGAAGCUCGAACCUGAACUUGGC		OtherRNA	ShortStack
ccm-b0.1r1-45819	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100027:1345-1549	.	67	0.82	ACGGCCGUUAGAAUGACAUUAAAG		OtherRNA	ShortStack
ccm-b0.1r1-94699	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10005:14470-14607	-	564	6.86	AGUGUGAUGAUAUGUUUUAAGAGGUAUACCUUCUGAGC		OtherRNA	ShortStack
ccm-b0.1r1-94700	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10005:14878-14972	-	374	4.55	AGUGUGAUGAUAUGUUUUAAGUGGUAUACCUUCUGAGC		OtherRNA	ShortStack
ccm-b0.1r1-94701	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10005:17943-17965	+	62	0.75	AUCUAGCUACUUUUGAAGU		OtherRNA	ShortStack
ccm-b0.1r1-75395	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100079:35986-36116	.	44	0.54	AAACCGGAAGGGUUUUGUAGAACC		OtherRNA	ShortStack
ccm-b0.1r1-31001	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10008:5431-5597	+	164	2.00	AAUGUGGACCUUUUACCACUUUUCAUAUAGAC		OtherRNA	ShortStack
ccm-b0.1r1-32475	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100103:6719-8035	.	168	2.04	AGACUAUGAUUGUAGUAGACAAGG		OtherRNA	ShortStack
ccm-b0.1r1-32481	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100103:15557-16048	-	52	0.63	UCAAUCGGACGGCGCUCCAGAGAUCGGAGA		OtherRNA	ShortStack
ccm-b0.1r1-86573	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100151:8006-8450	.	51	0.62	AUCGAUCUAUCUUGGACGGCGUGU		OtherRNA	ShortStack
ccm-b0.1r1-67221	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100162:336-664	.	56	0.68	AUGUUUGGUUCGUAGAAUUCGAAGC		OtherRNA	ShortStack
ccm-b0.1r1-131101	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100232:5246-5762	.	44	0.54	AUGAGAAAGGUAAUGGCGUUGUGC		OtherRNA	ShortStack
ccm-b0.1r1-100801	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100259:3935-4632	.	85	1.03	AUCCAACCGAUUGGACCGCGAACC		OtherRNA	ShortStack
ccm-b0.1r1-122725	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100376:6668-6764	-	48	0.58	GUCGCUUUGGCCGAGUGGUUAAGG		OtherRNA	ShortStack
ccm-b0.1r1-54814	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100407:33411-33574	+	77	0.94	ACAAGAACAUCUGCGGACUGCGGU		OtherRNA	ShortStack
ccm-b0.1r1-54821	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100407:52573-53125	-	61	0.74	UGACCGGACUGACAGCAGCCGCACUGAC		OtherRNA	ShortStack
ccm-b0.1r1-114601	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100428:408-764	+	788	9.59	UAAUAAUAAUAGACUG		OtherRNA	ShortStack
ccm-b0.1r1-28962	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10047:7-347	-	87	1.06	GACGUGUGGCAAUGAAU		OtherRNA	ShortStack
ccm-b0.1r1-28981	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10047:47201-47931	-	106	1.29	ACAGACUGUACGGGCUCUCGCGCC		OtherRNA	ShortStack
ccm-b0.1r1-28982	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10047:49850-50185	-	421	5.12	GCUGGAAUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.1r1-28983	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10047:56316-56610	.	47	0.57	UGAAAUUUCUGAGAAC		OtherRNA	ShortStack
ccm-b0.1r1-59923	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100626:4275-4461	.	42	0.51	ACCGAAUGGUAGAUCGUCUUGGGA		OtherRNA	ShortStack
ccm-b0.1r1-59927	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100626:8150-8305	.	43	0.52	CGGAGUGCCGUAGUGG		OtherRNA	ShortStack
ccm-b0.1r1-59928	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100626:10661-11640	.	74	0.90	AGGAACUGGCCAAUGCGACUCAAGU		OtherRNA	ShortStack
ccm-b0.1r1-59933	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100626:30802-31675	+	191	2.32	UCAUGUCAUUGUGGAGA		OtherRNA	ShortStack
ccm-b0.1r1-59934	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100626:32749-33058	+	58	0.71	GUAUCAUUGUGUAUCGUGGGUUGUACUUU		OtherRNA	ShortStack
ccm-b0.1r1-59935	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100626:33250-34134	+	130	1.58	CGGUCCGUAGAAGAAUG		OtherRNA	ShortStack
ccm-b0.1r1-59939	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100626:40647-41004	+	54	0.66	UGUACUUUGGAUUGUACGAUUCAAUUAAGCCU		OtherRNA	ShortStack
ccm-b0.1r1-59942	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100626:49370-50081	.	174	2.12	AUAGAACUUUAAAUGC		OtherRNA	ShortStack
ccm-b0.1r1-72842	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100653:961-1311	+	47	0.57	GUGUGCCUGGACAAGAAAGCU		OtherRNA	ShortStack
ccm-b0.1r1-70950	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10070:4233-4719	+	84	1.02	ACCCUGAUCUUUUCUUCUUUUUGU		OtherRNA	ShortStack
ccm-b0.1r1-70964	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10070:47782-48210	-	74	0.90	ACCGGGUUAGACGGUAGGCGGUACC		OtherRNA	ShortStack
ccm-b0.1r1-24834	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100719:13684-14378	.	63	0.77	GAACAGAAAUAUUUAUAGGACUUC		OtherRNA	ShortStack
ccm-b0.1r1-125079	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100745:2808-3906	-	273	3.32	AUGUGUCGUACGGAGCUGAGUUCGU		OtherRNA	ShortStack
ccm-b0.1r1-125080	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100745:4021-4375	-	58	0.71	CUACUAUAAGAUGAUCAAUGCC		OtherRNA	ShortStack
ccm-b0.1r1-125081	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100745:5049-6283	-	768	9.34	UCGUAGAAUCCGCAACAUCC		OtherRNA	ShortStack
ccm-b0.1r1-104559	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100858:20189-20544	.	141	1.72	UCCUGUACUAUACUUU		OtherRNA	ShortStack
ccm-b0.1r1-35486	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100892:6000-6660	-	12,666	154.08	AUGAUAUCUUACCACCAAGAUCUCUGAGGCCU		OtherRNA	ShortStack
ccm-b0.1r1-85400	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100934:1-154	+	1,331	16.19	UCUGGGUGUGGAUCAGCGAGA		OtherRNA	ShortStack
ccm-b0.1r1-110935	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100955:14700-15334	.	95	1.16	AACAAUGUUCAGUGACGCUAGACA		OtherRNA	ShortStack
ccm-b0.1r1-49919	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100962:5671-5941	.	59	0.72	AGAUGGCUAUCGGAAGACGACGAU		OtherRNA	ShortStack
ccm-b0.1r1-49922	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100962:7843-8544	-	55	0.67	CAGAGCGGACAGCUCCGAGGGCCC		OtherRNA	ShortStack
ccm-b0.1r1-49933	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig100962:54869-55292	.	49	0.60	CGAACUGUAGAGUUUA		OtherRNA	ShortStack
ccm-b0.1r1-85734	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101069:5843-6650	+	110	1.34	ACCAGAUUCAAUCAGACUGCGGCGAGUGGU		OtherRNA	ShortStack
ccm-b0.1r1-69001	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10107:49355-49931	.	158	1.92	AUCCUUCGAUGUCGGU		OtherRNA	ShortStack
ccm-b0.1r1-69005	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10107:55588-55723	.	78	0.95	AUGUUAGUCAUUGUCAGGUGAACU		OtherRNA	ShortStack
ccm-b0.1r1-89714	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101152:7434-7693	.	68	0.83	UCCGUUGUAGCCUAGC		OtherRNA	ShortStack
ccm-b0.1r1-88809	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101355:16611-17216	-	102	1.24	GCAUGCCUGUCGGGGC		OtherRNA	ShortStack
ccm-b0.1r1-88810	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101355:17526-18027	-	73	0.89	AAAUUUGAGGCUUUGGUUAAUC		OtherRNA	ShortStack
ccm-b0.1r1-105940	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101374:17355-17907	-	204	2.48	CCUCGGUCAGCUCAAGAAGCUGUCGUUCUUGAACGUGU		OtherRNA	ShortStack
ccm-b0.1r1-105941	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101374:20655-21106	-	187	2.28	ACCGCUUCGGCGGACC		OtherRNA	ShortStack
ccm-b0.1r1-90282	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101413:3432-4128	.	52	0.63	AGAGUUUGCACUCUGACAUUAUGG		OtherRNA	ShortStack
ccm-b0.1r1-110927	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101473:2474-2653	+	50	0.61	UAAGUACGUCGACAGCAAUUUCGAAGGCCUGUCUC		OtherRNA	ShortStack
ccm-b0.1r1-114160	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101476:5267-5624	.	45	0.55	AAUUGGGCUACAGGUGUUCUACC		OtherRNA	ShortStack
ccm-b0.1r1-114162	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101476:10176-10921	.	48	0.58	AAUUAGAAUCAGACUAGAAAGACU		OtherRNA	ShortStack
ccm-b0.1r1-129220	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101515:395-734	-	106	1.29	UUGGGAUGGGUCGGCU		OtherRNA	ShortStack
ccm-b0.1r1-136923	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10152:3478-3924	.	46	0.56	AUGGAUAGAGAAAAAGUAUGAUGU		OtherRNA	ShortStack
ccm-b0.1r1-136926	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10152:17158-17667	.	50	0.61	ACCGAUUGACUGAGAUUAU		OtherRNA	ShortStack
ccm-b0.1r1-83871	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101549:16259-16908	-	255	3.10	AGGGAGAAAGCGAGUCGAGAUCG		OtherRNA	ShortStack
ccm-b0.1r1-83881	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101549:56543-57753	.	117	1.42	ACGCUCUUUUUGUAAACCACAGGA		OtherRNA	ShortStack
ccm-b0.1r1-49973	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101556:7942-8099	.	68	0.83	AUUGCCACAAUGUGAACUCCUAUC		OtherRNA	ShortStack
ccm-b0.1r1-120299	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101563:2021-3031	+	264	3.21	AACCUUCUAGCUCGGC		OtherRNA	ShortStack
ccm-b0.1r1-42648	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101674:681-1120	-	72	0.88	UGUGAUGUAGCUCAGA		OtherRNA	ShortStack
ccm-b0.1r1-42656	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101674:26071-26404	+	83	1.01	ACGAGAGUUUGACAGCCGGCGCC		OtherRNA	ShortStack
ccm-b0.1r1-133506	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101764:3124-3301	.	55	0.67	AAUAUUGGACCAAGGCUUGAACAGC		OtherRNA	ShortStack
ccm-b0.1r1-133507	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig101764:6268-6831	.	86	1.05	AAUUCGGUGGAGGUAGGAUCCC		OtherRNA	ShortStack
ccm-b0.1r1-88681	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10179:8312-8369	+	5,916	71.97	UCCGUUGUCGUCCAGCGGUUAGGAUAUCUGGCU		OtherRNA	ShortStack
ccm-b0.1r1-88683	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10179:9539-9745	+	283	3.44	UGUGGGCGUUAGAGCAUC		OtherRNA	ShortStack
ccm-b0.1r1-88689	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10179:24803-25125	.	94	1.14	AGAGGAUCGUCCGCAUUUGGAUC		OtherRNA	ShortStack
ccm-b0.1r1-47655	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1018:1-149	+	568	6.91	UCUGUACGAUUGAGAAACCGGC		OtherRNA	ShortStack
ccm-b0.1r1-47656	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1018:1315-1399	.	294	3.58	ACAGAGAACAGAGAACAGAGAUUCGUUUCACAUA		OtherRNA	ShortStack
ccm-b0.1r1-47657	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1018:1601-1725	.	64	0.78	AUGCCAAGUAGAAAAACUAUC		OtherRNA	ShortStack
ccm-b0.1r1-27542	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10187:8552-9161	+	46	0.56	CCCAUGAAGACGGGCUGGACC		OtherRNA	ShortStack
ccm-b0.1r1-27551	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10187:50140-50305	+	52	0.63	AAUCAAGAAGGCUGUAGCAAUCAGGAAGCAUU		OtherRNA	ShortStack
ccm-b0.1r1-27559	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10187:65855-66177	+	55	0.67	AUUAUAAUUUUCUGAUCAAUC		OtherRNA	ShortStack
ccm-b0.1r1-27566	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10187:83090-83397	+	918	11.17	UCGUGUGGAACAGAAGGGUAAAAGCUCGUUUGAUUU		OtherRNA	ShortStack
ccm-b0.1r1-61624	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10195:29292-30210	-	53	0.65	CUGACACUGAGGAACG		OtherRNA	ShortStack
ccm-b0.1r1-61631	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10195:41041-41353	-	110	1.34	AUCUGUGAACUCUGUCCUUUCAC		OtherRNA	ShortStack
ccm-b0.1r1-61640	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10195:55879-56294	.	117	1.42	UACCACUACUUUUAAC		OtherRNA	ShortStack
ccm-b0.1r1-61643	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10195:64954-65426	.	74	0.90	AUAUGUCGUCUCGUGCUCGUUACG		OtherRNA	ShortStack
ccm-b0.1r1-15964	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1020:32-243	.	77	0.94	CCGGCUUGUUAGCUCCUUACAGC		OtherRNA	ShortStack
ccm-b0.1r1-77798	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102078:56864-57731	-	61	0.74	GGAUAACAUCAUAGGAUC		OtherRNA	ShortStack
ccm-b0.1r1-90747	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102209:17562-17794	-	178	2.17	AUGUGUGAUCUUGUUUGAUUUGUCA		OtherRNA	ShortStack
ccm-b0.1r1-102239	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102226:38578-38833	.	57	0.69	AAUGUGGGACCUUUGAUCAUUAUC		OtherRNA	ShortStack
ccm-b0.1r1-102242	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102226:41590-41978	.	53	0.65	AUGUAGGACUUAAACUUUUUUAUC		OtherRNA	ShortStack
ccm-b0.1r1-122607	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102282:8343-8359	+	74	0.90	CGAGAAUUCAGGUGGA		OtherRNA	ShortStack
ccm-b0.1r1-12102	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102306:3033-3671	.	118	1.44	AGGAAUAAGUGGAAAAGAAUAGGG		OtherRNA	ShortStack
ccm-b0.1r1-12105	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102306:21877-22313	-	53	0.65	ACGGUAGAAGUAGACUAUAAAUAG		OtherRNA	ShortStack
ccm-b0.1r1-133276	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102398:2174-2348	.	48	0.58	AGUUUUGUAGAACUUUUGAGCAUC		OtherRNA	ShortStack
ccm-b0.1r1-133282	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102398:10942-10966	+	303	3.69	CCUCGUGUUGCACCUUG		OtherRNA	ShortStack
ccm-b0.1r1-137814	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102464:1-492	-	7,857	95.58	CCAUUUUUGGUAAGCAGAACU		OtherRNA	ShortStack
ccm-b0.1r1-137815	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102464:762-1424	-	160,824	1,956.34	UUGACUUGUGGGCUCUCCAUU		OtherRNA	ShortStack
ccm-b0.1r1-137816	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102464:1915-2136	-	2,229	27.12	AUGACUCUCGGCAAUGGAG		OtherRNA	ShortStack
ccm-b0.1r1-137817	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102464:2233-2340	-	172	2.09	GAUCAUUGUCGAUACC		OtherRNA	ShortStack
ccm-b0.1r1-137818	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102464:2418-2479	-	50	0.61	UACGUCCCUGCCCUUUGU		OtherRNA	ShortStack
ccm-b0.1r1-10207	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102481:1928-2254	+	55	0.67	AAAAAAGUUAAACUGUGGCAAUCU		OtherRNA	ShortStack
ccm-b0.1r1-108285	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102522:25905-26166	.	49	0.60	CCCCCGAGUCACCCAGGACAUG		OtherRNA	ShortStack
ccm-b0.1r1-61981	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102524:538-1139	+	955	11.62	CCUUGUGAUGAGUAUAUAAAUAGUGAAAAUUCUGAGC		OtherRNA	ShortStack
ccm-b0.1r1-136337	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102552:7085-7986	.	121	1.47	ACAUAGAACACUAUUUUAGAGAAG		OtherRNA	ShortStack
ccm-b0.1r1-43615	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102711:2481-2749	-	43	0.52	GAUGGAGGUUAUCUUCUGAAUGGGAAUAAGAUGUA		OtherRNA	ShortStack
ccm-b0.1r1-48285	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102765:18867-19587	-	421	5.12	UGGGGCGUGGCCAAGG		OtherRNA	ShortStack
ccm-b0.1r1-11028	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102792:2009-2255	.	45	0.55	AUUGUCACCUUUUAAAAAAGUAAG		OtherRNA	ShortStack
ccm-b0.1r1-60727	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102870:23365-23754	.	43	0.52	AAUAUUUUGAUAGUUCACACUGGC		OtherRNA	ShortStack
ccm-b0.1r1-60734	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102870:33590-33729	+	50	0.61	GCUCGGUGGAACCUCCA		OtherRNA	ShortStack
ccm-b0.1r1-16202	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102880:12549-12854	-	524	6.37	AUGGAUUGUCAGUGUAGACGAUU		OtherRNA	ShortStack
ccm-b0.1r1-46504	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102891:4554-4818	.	150	1.83	ACGAACGGAGUGCCGUAACUGCCU		OtherRNA	ShortStack
ccm-b0.1r1-46505	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102891:9523-9727	+	54	0.66	UGGGGCUGUAGUAGGUUCU		OtherRNA	ShortStack
ccm-b0.1r1-77014	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10291:11492-12614	.	114	1.39	CUUCGACUCAAGAAUUGCGUG		OtherRNA	ShortStack
ccm-b0.1r1-87779	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig102984:12-585	-	70	0.85	CCGGGACGUGGAAGCU		OtherRNA	ShortStack
ccm-b0.1r1-100665	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103004:4546-5837	.	58	0.71	CUGCGUGAGGGCACCA		OtherRNA	ShortStack
ccm-b0.1r1-89113	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103045:6694-7271	.	98	1.19	CUUCGGAUCUAGUGGU		OtherRNA	ShortStack
ccm-b0.1r1-51599	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103056:89-461	.	51	0.62	UCCGUGGCUGCUGACGGUGGGAGCCGGCAC		OtherRNA	ShortStack
ccm-b0.1r1-51600	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103056:692-1201	+	1,362	16.57	CGGUACUGACCGGGGUUCGUUUCCCCGGAUGCGCA		OtherRNA	ShortStack
ccm-b0.1r1-35117	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10307:4432-5467	.	88	1.07	CGAUGGAACAAUGUAGA		OtherRNA	ShortStack
ccm-b0.1r1-35130	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10307:54259-54749	.	135	1.64	ACAUGGAAGCUGAUAGAUAACUGG		OtherRNA	ShortStack
ccm-b0.1r1-40695	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10310:5409-5896	.	64	0.78	AGGUAAUCAGGUAGAUGAUGAACC		OtherRNA	ShortStack
ccm-b0.1r1-137700	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103122:19213-20147	.	67	0.82	UUCGGGGCGUGGACCA		OtherRNA	ShortStack
ccm-b0.1r1-33052	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10314:53672-54251	.	53	0.65	AGGAAAGAUUUUUAGGACCGGAGA		OtherRNA	ShortStack
ccm-b0.1r1-49832	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103195:9321-9618	+	128	1.56	GGAAGUGAUGUCAAAAAGUAAAAGGUCUGAGCA		OtherRNA	ShortStack
ccm-b0.1r1-65813	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10320:32360-32708	.	73	0.89	AUUAGAAUUUGACCGUGUGAAUAGC		OtherRNA	ShortStack
ccm-b0.1r1-31935	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103205:436-818	+	1,520	18.49	CGCGAUUCUGAGCCAU		OtherRNA	ShortStack
ccm-b0.1r1-31940	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103205:10880-11075	.	64	0.78	AUGAGAACUUUGAAGA		OtherRNA	ShortStack
ccm-b0.1r1-25253	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103206:12-630	-	107	1.30	UAGUUCAGCCCUGCCAUG		OtherRNA	ShortStack
ccm-b0.1r1-25259	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103206:34647-35065	.	48	0.58	AAAUAUCGGAAUCGAUUCUGUCCU		OtherRNA	ShortStack
ccm-b0.1r1-88256	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103216:48429-48921	.	59	0.72	AAGGACAAAGAAUUAUUCAUAAUU		OtherRNA	ShortStack
ccm-b0.1r1-88257	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103216:52941-53428	+	60	0.73	UGUUUGCGCGUGCUUGUAUGUAAAAU		OtherRNA	ShortStack
ccm-b0.1r1-73595	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10323:2-178	.	72	0.88	CGACUCAGUCGGAGGU		OtherRNA	ShortStack
ccm-b0.1r1-73611	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10323:29662-29861	.	57	0.69	GGCCCGGUGGGCAGUCCGGCCUGC		OtherRNA	ShortStack
ccm-b0.1r1-32855	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103239:6448-6730	.	43	0.52	GGGAUUGCUUGACAUCAGC		OtherRNA	ShortStack
ccm-b0.1r1-58829	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103249:17005-17710	.	179	2.18	CGUCGUCGUCGGCCACCUGAGUGCU		OtherRNA	ShortStack
ccm-b0.1r1-11250	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103251:4000-5045	-	1,920	23.36	CUGGAGAUCGUGAUGACGU		OtherRNA	ShortStack
ccm-b0.1r1-11251	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103251:5855-6301	-	306	3.72	CGUUUGGGGACUACCAAGAGCUCCGCCACGCCGGCAACCUC		OtherRNA	ShortStack
ccm-b0.1r1-11255	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103251:13024-13633	.	48	0.58	AAGCAAACGUUGUCCUGCUCUCGG		OtherRNA	ShortStack
ccm-b0.1r1-128262	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103269:644-1038	.	240	2.92	UGCUGUUGGGGCUGCAGCACC		OtherRNA	ShortStack
ccm-b0.1r1-128264	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103269:3124-3797	.	67	0.82	GCUUGAAAAUCGGACCU		OtherRNA	ShortStack
ccm-b0.1r1-66295	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10329:5856-6346	.	73	0.89	AAACUUGUAGCGUCUUGUAGAAUA		OtherRNA	ShortStack
ccm-b0.1r1-87807	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103294:15-294	-	42	0.51	UUUGAAGACUUUCACGAAUGGUACC		OtherRNA	ShortStack
ccm-b0.1r1-130931	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103331:297-496	.	53	0.65	UGUCUGAAUGGUUAAGAGAUUUGCU		OtherRNA	ShortStack
ccm-b0.1r1-133571	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103344:112-747	.	60	0.73	UGAGGCUCUGGAGUUAUAUAGUC		OtherRNA	ShortStack
ccm-b0.1r1-127339	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103428:18529-19158	.	42	0.51	CGAACCCGGGGAACUG		OtherRNA	ShortStack
ccm-b0.1r1-30226	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103454:1065-1237	.	53	0.65	CACGAAUAAAGAAAGGCU		OtherRNA	ShortStack
ccm-b0.1r1-56783	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10348:16051-16470	.	79	0.96	ACCCGGACAACCAAAGAGGACAGG		OtherRNA	ShortStack
ccm-b0.1r1-132939	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10349:33880-34134	-	110	1.34	UGCGUGAUUUGUUAAGA		OtherRNA	ShortStack
ccm-b0.1r1-36854	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103494:5542-5839	+	4,063	49.42	GUUAAAAUUCCUGAACCGGG		OtherRNA	ShortStack
ccm-b0.1r1-36874	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103494:59467-59843	.	46	0.56	AGCACUGGAAAUACUCGUGAAGCU		OtherRNA	ShortStack
ccm-b0.1r1-128672	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10351:18540-18622	-	6,420	78.10	UCCGUUGUAGUCUAGUUGGUUAGGAUA		OtherRNA	ShortStack
ccm-b0.1r1-128674	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10351:24351-24899	-	1,472	17.91	UCCGUUGUAGUCUAGU		OtherRNA	ShortStack
ccm-b0.1r1-17488	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103614:933-2106	.	61	0.74	AGGACGGCGACCAUGAUUCUGC		OtherRNA	ShortStack
ccm-b0.1r1-42246	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103649:1799-2324	-	7,613	92.61	CGUUGAUUCGCACAAUUGGUCAUCGCGUUUGGUUGA		OtherRNA	ShortStack
ccm-b0.1r1-72825	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103720:1181-1384	.	66	0.80	UUUUGUGUCUGUGUGAACUAUCACC		OtherRNA	ShortStack
ccm-b0.1r1-82755	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10379:10-77	+	148	1.80	UCCUGCUGUCGACGCC		OtherRNA	ShortStack
ccm-b0.1r1-27053	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10383:1213-1323	+	274	3.33	UUGCAGUGAUGAAGAAACAGUUUAGACUAGAGUUUCUGAUCU		OtherRNA	ShortStack
ccm-b0.1r1-27054	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10383:1456-2134	+	940	11.44	AUCUAUGAUCUGAUUGUUGUUACACACACUGAAACCC		OtherRNA	ShortStack
ccm-b0.1r1-51757	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10384:29771-30160	.	104	1.27	AUCGAUCUCAGCAUAAUUGGCACU		OtherRNA	ShortStack
ccm-b0.1r1-51764	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10384:56945-57966	-	247	3.01	GUCGAUCUCGUUGUGAACG		OtherRNA	ShortStack
ccm-b0.1r1-51765	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10384:58358-58931	-	140	1.70	AUGUUGUUGGUGUUAAUGAACA		OtherRNA	ShortStack
ccm-b0.1r1-51766	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10384:59057-59289	-	69	0.84	AAAUUACAAUCUGUGGAAUU		OtherRNA	ShortStack
ccm-b0.1r1-51767	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10384:59860-60148	-	64	0.78	AUAGAGCUCUGUUCCACU		OtherRNA	ShortStack
ccm-b0.1r1-58575	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103870:27-477	.	90	1.10	AGGAGAGAACACCGACGGUCCCGG		OtherRNA	ShortStack
ccm-b0.1r1-58579	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103870:7583-8264	.	78	0.95	UUCAUAUCCACACUUGCACUG		OtherRNA	ShortStack
ccm-b0.1r1-58582	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103870:11119-11584	.	65	0.79	AGGACGAUGUGAAAUAAUACUUGU		OtherRNA	ShortStack
ccm-b0.1r1-58585	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103870:15146-15683	.	107	1.30	UGGCGGUGAGUUUCGAACUCGUGACU		OtherRNA	ShortStack
ccm-b0.1r1-58520	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103908:1-152	-	116,902	1,422.06	UCGGAUAACCGUAGUAAAUCUAGAGCUAAUACG		OtherRNA	ShortStack
ccm-b0.1r1-95625	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103914:2816-3198	+	203	2.47	UUUGGGGUAGGGACCAGU		OtherRNA	ShortStack
ccm-b0.1r1-50510	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103990:3790-4013	-	53	0.65	UAUCAUUGGCCUGGGUGCGUCCGAAUGAAGGA		OtherRNA	ShortStack
ccm-b0.1r1-50516	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103990:15463-15787	-	49	0.60	AUUGGAUCUAAACGUUUU		OtherRNA	ShortStack
ccm-b0.1r1-82820	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig103999:2316-2405	-	70	0.85	ACCGGUAGACUUGAAU		OtherRNA	ShortStack
ccm-b0.1r1-108424	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104001:7476-8666	.	773	9.40	AUCUCUGUUCUCUGUUCUCUC		OtherRNA	ShortStack
ccm-b0.1r1-108428	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104001:29279-29392	.	59	0.72	AGUCUGUAUUGAUCACUUGAGUUA		OtherRNA	ShortStack
ccm-b0.1r1-108429	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104001:29638-29766	.	115	1.40	UUCUGUUUGUGAACGUAGCAUUGCC		OtherRNA	ShortStack
ccm-b0.1r1-137166	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104113:3975-4118	.	57	0.69	CUUGGCCUUCUGACAGGU		OtherRNA	ShortStack
ccm-b0.1r1-52325	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104123:743-3289	.	370	4.50	CUCGGUGGAACCUCCA	miR9995	OtherRNA	ShortStack
ccm-b0.1r1-12157	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104140:2316-2520	.	75	0.91	UUUUAUUUUCCAAUGUAGUACUACU		OtherRNA	ShortStack
ccm-b0.1r1-12164	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104140:23266-23461	-	169	2.06	CUCCCGGCAAACGCACU		OtherRNA	ShortStack
ccm-b0.1r1-42045	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104156:36330-36578	.	62	0.75	AAAGGGACUAUUGAGAAGAUCUAU		OtherRNA	ShortStack
ccm-b0.1r1-124214	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104194:5695-6222	.	58	0.71	AUUUAUUUAUUGAACUGUAUCAUC		OtherRNA	ShortStack
ccm-b0.1r1-95374	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104274:30812-31018	.	42	0.51	CGGAGCUGUGGUACUCCUGGCGCC		OtherRNA	ShortStack
ccm-b0.1r1-95384	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104274:59565-59716	+	138	1.68	AGGACGGUGGUCAUGA		OtherRNA	ShortStack
ccm-b0.1r1-95387	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104274:63911-64619	.	53	0.65	AGUGCUGGAAGGUUAAG		OtherRNA	ShortStack
ccm-b0.1r1-46439	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104297:16659-17004	.	122	1.48	ACUAUGUGAAACUCAUUUGAAAGA		OtherRNA	ShortStack
ccm-b0.1r1-46445	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104297:27886-28627	-	107	1.30	CUAAGUUCCGUGAGCUCAA		OtherRNA	ShortStack
ccm-b0.1r1-46446	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104297:28709-28819	-	57	0.69	AUCUGAACUAAUCCAUU		OtherRNA	ShortStack
ccm-b0.1r1-106602	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104407:1566-2086	.	95	1.16	CCUGUAUAGGCCACCA		OtherRNA	ShortStack
ccm-b0.1r1-83114	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104458:25046-25572	.	42	0.51	ACCACCGGAUGAAUGACAGCACCC		OtherRNA	ShortStack
ccm-b0.1r1-83115	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104458:26116-26563	-	50	0.61	AAAUUAAUUCGUAGAUUAGU		OtherRNA	ShortStack
ccm-b0.1r1-89658	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104460:1398-1782	.	132	1.61	UCGAAAACUGUAGCAACCAAGUC		OtherRNA	ShortStack
ccm-b0.1r1-89660	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104460:6458-7138	+	188	2.29	CCGGUUGGACCCUCCA		OtherRNA	ShortStack
ccm-b0.1r1-89675	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104460:43174-43453	.	60	0.73	AAGAGGCAGUGUGGUUAGAAGGUG		OtherRNA	ShortStack
ccm-b0.1r1-92791	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104464:21148-21249	+	103	1.25	UCGGUCAAUGAUCAGCAGAUU		OtherRNA	ShortStack
ccm-b0.1r1-104459	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104502:976-1365	.	60	0.73	AAGCAAUCCCACAUGUCAAUCUGU		OtherRNA	ShortStack
ccm-b0.1r1-78570	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104597:2875-3184	.	44	0.54	ACCGUCACACUGGCAAUGAACUGC		OtherRNA	ShortStack
ccm-b0.1r1-129423	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104608:13-228	.	77	0.94	UUUCCCGGCAACGGAGCCA		OtherRNA	ShortStack
ccm-b0.1r1-93816	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104647:8094-8899	.	105	1.28	AGUCCAUGAACUCUGUGCUAAUGU		OtherRNA	ShortStack
ccm-b0.1r1-18960	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104648:562-943	-	53	0.65	AUUAAGAACGAUAAGGACGAGG		OtherRNA	ShortStack
ccm-b0.1r1-18961	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104648:1186-1607	-	57	0.69	GAGGGACCGUUAGGGCCGGGGACA		OtherRNA	ShortStack
ccm-b0.1r1-117679	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10468:1747-1909	-	268	3.26	AAUUGGAACGAUACAGA		OtherRNA	ShortStack
ccm-b0.1r1-117685	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10468:16968-17170	-	48	0.58	UUCGAGGACACGAAUCUGUGCGU		OtherRNA	ShortStack
ccm-b0.1r1-117687	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10468:23467-23715	.	165	2.01	ACUUGGUAGUUAAACUC		OtherRNA	ShortStack
ccm-b0.1r1-41683	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104790:9-215	.	133	1.62	ACUCCGGUUUUGUAGUAAGAAUUC		OtherRNA	ShortStack
ccm-b0.1r1-134527	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104810:1440-2602	.	138	1.68	CCGGGCGACGCCACCC		OtherRNA	ShortStack
ccm-b0.1r1-134529	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104810:4877-5259	.	45	0.55	AUCGAGAGCUCCAAGC		OtherRNA	ShortStack
ccm-b0.1r1-22598	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104824:2732-2875	.	53	0.65	AGUGUUGUAGAAGGAGUGCAGAGC		OtherRNA	ShortStack
ccm-b0.1r1-12855	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104828:61-149	-	701	8.53	UGAGGUGAUGAAUGUUAUG		OtherRNA	ShortStack
ccm-b0.1r1-12856	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104828:267-375	-	148	1.80	AUUAGCUCUAACUGAUA		OtherRNA	ShortStack
ccm-b0.1r1-12857	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104828:488-518	-	1,088	13.24	GCUACAAGUAUUCGUACUGACUGAUCA		OtherRNA	ShortStack
ccm-b0.1r1-63367	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104846:19809-20566	+	43	0.52	CGAAAACGUUCGGCCUGCCCC		OtherRNA	ShortStack
ccm-b0.1r1-63369	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104846:33603-33656	-	47	0.57	AUGACUAUCGGCAAUGGAC		OtherRNA	ShortStack
ccm-b0.1r1-90181	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104938:8195-9290	.	78	0.95	UAUUCUGGUGUCCUUUA		OtherRNA	ShortStack
ccm-b0.1r1-27099	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104947:11534-12081	-	42	0.51	AGACAAAAAGAAUGACAUU		OtherRNA	ShortStack
ccm-b0.1r1-27102	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104947:24220-24541	-	210	2.56	CGGCUGGAUCACCUCCG		OtherRNA	ShortStack
ccm-b0.1r1-71606	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10497:4150-4739	.	49	0.60	AAAGUGUUUUGUUGGAAGUAGAAAAU		OtherRNA	ShortStack
ccm-b0.1r1-87990	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104997:39658-40923	.	99	1.20	AAUACAGGCCUAGAUC		OtherRNA	ShortStack
ccm-b0.1r1-87997	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104997:59274-60704	.	83	1.01	AGGGACAAUUGGGGUACACCUUU		OtherRNA	ShortStack
ccm-b0.1r1-88000	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig104997:65989-66720	.	134	1.63	AAGAAGUCUGAAUCAUUAAGUGUU		OtherRNA	ShortStack
ccm-b0.1r1-121726	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105079:53-882	+	50	0.61	AAUUGGCAUUGAUUUCUCAUGGGC		OtherRNA	ShortStack
ccm-b0.1r1-121734	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105079:22090-22352	.	65	0.79	UCUGGUCCGCUGGUAGAACUGCC		OtherRNA	ShortStack
ccm-b0.1r1-63044	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105094:10252-11040	.	140	1.70	UCGAGACCACCGGAUGAACGACGU		OtherRNA	ShortStack
ccm-b0.1r1-63045	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105094:13181-13751	.	74	0.90	ACAAAUUCAGACUGUGG		OtherRNA	ShortStack
ccm-b0.1r1-134894	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105103:4034-4680	+	66	0.80	GCGACCCCGAGUCAGGA		OtherRNA	ShortStack
ccm-b0.1r1-62316	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105127:1315-1527	-	1,855	22.57	CGUGCUUGGGCGAGAGC		OtherRNA	ShortStack
ccm-b0.1r1-33411	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10515:5532-5829	+	55	0.67	AGAACUUAGAAGUCAAA		OtherRNA	ShortStack
ccm-b0.1r1-33425	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10515:33426-33778	.	46	0.56	UAGGACUUUGUAAUGUGGUAAUG		OtherRNA	ShortStack
ccm-b0.1r1-58611	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105243:13012-13134	+	42	0.51	CUAAGGACUGCACUCUUCUUCGAG		OtherRNA	ShortStack
ccm-b0.1r1-86254	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105332:6095-6230	+	42	0.51	UGGAAUGGCGGAGACUGCUG		OtherRNA	ShortStack
ccm-b0.1r1-86290	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105345:20632-21087	.	59	0.72	AUGCCAGCCAUAAUUGUCGACGAC		OtherRNA	ShortStack
ccm-b0.1r1-86302	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105345:57978-58553	.	52	0.63	AGGAGAGUAGAAGUAUCUAACGCU		OtherRNA	ShortStack
ccm-b0.1r1-86305	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105345:66743-67236	.	51	0.62	AAUCUAUUUAGGGACAGAGAGAGU		OtherRNA	ShortStack
ccm-b0.1r1-86306	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105345:70696-71372	.	48	0.58	AAGCUAUGAACUUUAUUCU		OtherRNA	ShortStack
ccm-b0.1r1-130799	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105459:3830-4311	.	42	0.51	UCUGAAAUUCAAGAACUCAAAUUU		OtherRNA	ShortStack
ccm-b0.1r1-94062	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105519:474-1132	+	189	2.30	GGACUGAGAGCUCUUC		OtherRNA	ShortStack
ccm-b0.1r1-94063	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105519:3286-4183	+	192	2.34	AACAUGUGAUGAGUAGAUUAUUGG		OtherRNA	ShortStack
ccm-b0.1r1-90718	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105548:1-221	.	89	1.08	CGUAUCUGCUGCUGUAACUUGGGU		OtherRNA	ShortStack
ccm-b0.1r1-132777	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105562:29139-29819	.	62	0.75	AGCAGUUGGCAGUUGGCUGUUGGC		OtherRNA	ShortStack
ccm-b0.1r1-112074	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105567:12731-13290	+	45	0.55	UUGAUAUGGGAUUGUAUG		OtherRNA	ShortStack
ccm-b0.1r1-40680	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105628:1865-2283	-	64	0.78	AAUGAAUGUAGACACAAUGUAUGU		OtherRNA	ShortStack
ccm-b0.1r1-27487	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105655:3652-4167	.	87	1.06	CAAACAGUCUGAACCAUUAAGUGCG		OtherRNA	ShortStack
ccm-b0.1r1-27488	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105655:10228-10536	.	75	0.91	GAUUAACAGGGACGGU		OtherRNA	ShortStack
ccm-b0.1r1-20610	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105664:819-958	-	116	1.41	AUCCAAUUAGUGGCUGACAUGU		OtherRNA	ShortStack
ccm-b0.1r1-54218	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10570:14770-14833	-	102	1.24	GACCAACUCAGAACUG		OtherRNA	ShortStack
ccm-b0.1r1-54232	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10570:48793-48965	.	56	0.68	UAAUGGUCUCGUGAUUAGACG		OtherRNA	ShortStack
ccm-b0.1r1-27299	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10572:3488-3962	+	44	0.54	UAGCGUGUGCUGUUGGGUUC		OtherRNA	ShortStack
ccm-b0.1r1-82230	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10574:3062-3442	.	60	0.73	AGGAGUAAAGUGAACUUUGGCCC		OtherRNA	ShortStack
ccm-b0.1r1-82237	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10574:24443-24737	+	58	0.71	AAUCAUUGUUGGCUCUU		OtherRNA	ShortStack
ccm-b0.1r1-137908	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105779:14601-14690	.	46	0.56	ACACAACUCUCGAUCCAUCCAAGU		OtherRNA	ShortStack
ccm-b0.1r1-137919	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105779:61265-61636	-	74	0.90	AGUAAGACGUGAUAAGUAGAUUAGU		OtherRNA	ShortStack
ccm-b0.1r1-137923	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105779:78081-78452	.	44	0.54	AGAAGAUCUAUGAGGGACA		OtherRNA	ShortStack
ccm-b0.1r1-137924	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105779:79007-79232	-	61	0.74	GGAAGCGGAUGGAGGCU		OtherRNA	ShortStack
ccm-b0.1r1-137931	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105779:84927-85531	.	68	0.83	ACCUGAUCGUACGGUCACUUAGAC		OtherRNA	ShortStack
ccm-b0.1r1-130266	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105886:9574-10083	+	63	0.77	CGUCGUUCGGAGCGCC		OtherRNA	ShortStack
ccm-b0.1r1-109986	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105919:5405-5917	+	316	3.84	GUGUGAUUGAGAGGUUUGA		OtherRNA	ShortStack
ccm-b0.1r1-109987	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105919:6196-7554	+	565	6.87	CGUACCUGUUGGACGUGU		OtherRNA	ShortStack
ccm-b0.1r1-67718	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105954:224-392	-	522	6.35	UCCGCUGUAGCAUUGGC		OtherRNA	ShortStack
ccm-b0.1r1-67719	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105954:742-927	-	456	5.55	UCCGCUGUAGCACUGGCC		OtherRNA	ShortStack
ccm-b0.1r1-67720	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105954:1552-1617	.	45	0.55	AUUUCAGGACCGAGAGAGUAACUU		OtherRNA	ShortStack
ccm-b0.1r1-67722	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105954:5046-5688	+	270,608	3,291.81	UCCGCUGUAGCACCGGC		OtherRNA	ShortStack
ccm-b0.1r1-67723	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105954:10527-10670	.	60	0.73	AAUCGACAGGAUUAGGAUUAGGGU		OtherRNA	ShortStack
ccm-b0.1r1-136362	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105955:641-1051	.	92	1.12	AACCAAAAAAAUCGAGGAUUGAAC		OtherRNA	ShortStack
ccm-b0.1r1-18916	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105957:98-647	.	43	0.52	UGUGAGAUUUAACUGGGUUGUUA		OtherRNA	ShortStack
ccm-b0.1r1-26812	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig105999:16421-16614	-	44	0.54	UUCUGGUGCUGUUGUUGCUGCUGU		OtherRNA	ShortStack
ccm-b0.1r1-11298	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106009:10526-11969	-	551	6.70	ACUCGGAGCUCGGCUC		OtherRNA	ShortStack
ccm-b0.1r1-28321	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10603:568-1100	+	42	0.51	AUGGAACGGAGGGAGUACUGU		OtherRNA	ShortStack
ccm-b0.1r1-28322	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10603:1551-2354	.	70	0.85	GAUAGUACAUUUCUCUGAAUAGAA		OtherRNA	ShortStack
ccm-b0.1r1-60392	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106050:9017-9172	.	49	0.60	ACGAGACUGUUUUCUAUUGGAUGA		OtherRNA	ShortStack
ccm-b0.1r1-60394	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106050:13322-13937	+	42	0.51	GAUCGAAUGUCCAGAAGCUC		OtherRNA	ShortStack
ccm-b0.1r1-30604	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10610:9161-9408	.	143	1.74	UAGGUAGGACGUGUCA		OtherRNA	ShortStack
ccm-b0.1r1-103724	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10620:159-520	+	42	0.51	CAGAGAGCGAAGAACU		OtherRNA	ShortStack
ccm-b0.1r1-103725	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10620:605-983	+	55	0.67	AUCAUGAAUCGAAGAACAAAUAAAUAGAAUAAAAAAGU		OtherRNA	ShortStack
ccm-b0.1r1-53840	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106238:2729-3590	.	75	0.91	UUGGGUCGGAGAGGGUACGGUG		OtherRNA	ShortStack
ccm-b0.1r1-37648	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10626:6430-6511	+	10,085	122.68	CCCGGUAGGACCUCCA		OtherRNA	ShortStack
ccm-b0.1r1-84785	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10628:8542-9122	-	73	0.89	UGGAUGCUGAUCUUUGGGACCA		OtherRNA	ShortStack
ccm-b0.1r1-84786	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10628:15637-15888	-	88	1.07	ACCGAUCGUUUGACCUGAUUACGGCG		OtherRNA	ShortStack
ccm-b0.1r1-84788	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10628:28037-28255	.	48	0.58	UCCCUAUGUAGAAUUAUACU		OtherRNA	ShortStack
ccm-b0.1r1-84792	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10628:33669-33877	.	119	1.45	AACUGUCUUUGUCCACUUUUGACU		OtherRNA	ShortStack
ccm-b0.1r1-84796	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10628:36961-37100	-	157	1.91	UUGGCUGAAUGACUGAUUGAGUU		OtherRNA	ShortStack
ccm-b0.1r1-43276	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106336:19472-19718	-	143	1.74	AAGUGGACAAAUAUAGCGGGACA		OtherRNA	ShortStack
ccm-b0.1r1-43277	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106336:21473-21761	.	48	0.58	AGUAAGAAGUGAUAUGUAGAUUAUU		OtherRNA	ShortStack
ccm-b0.1r1-43283	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106336:64046-64381	.	43	0.52	UUUAGAACGGAAUGAUUGAUUC		OtherRNA	ShortStack
ccm-b0.1r1-102635	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10644:18392-19209	.	44	0.54	AAUCAAACUGAAUUCUAACUUUCC		OtherRNA	ShortStack
ccm-b0.1r1-26410	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10645:2668-2958	+	59	0.72	GUGUAGUUUCCGAUGUUU		OtherRNA	ShortStack
ccm-b0.1r1-26411	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10645:3196-3347	+	47	0.57	CCAAUUGCUGCUGAGGUCUUUAAAAAGGCUGGGACUUAU		OtherRNA	ShortStack
ccm-b0.1r1-26412	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10645:6578-6773	+	61	0.74	GACUUUGAAAAGGAAGGACU		OtherRNA	ShortStack
ccm-b0.1r1-119076	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106526:1968-2598	.	77	0.94	AAGUUUGUGAAGGCUGAGAGCAUU		OtherRNA	ShortStack
ccm-b0.1r1-62362	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106558:3551-4355	.	46	0.56	CCCUUUGUUCGGCCAGUACAGC		OtherRNA	ShortStack
ccm-b0.1r1-62365	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106558:7652-8796	.	103	1.25	GAGAUUGUACAAAGAGAUA		OtherRNA	ShortStack
ccm-b0.1r1-62368	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106558:18646-19088	.	45	0.55	GGGGAUGUAGGAUCAUUG		OtherRNA	ShortStack
ccm-b0.1r1-25479	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10663:4540-5008	.	60	0.73	UUCCCGUCCUCGUCGAACACG		OtherRNA	ShortStack
ccm-b0.1r1-82380	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106643:33405-33937	.	49	0.60	ACGUUGCCAAGUUAAUACUUUAGU		OtherRNA	ShortStack
ccm-b0.1r1-134774	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106648:2033-2825	+	115	1.40	UGCCGGCACUGUCACAAUGAAG		OtherRNA	ShortStack
ccm-b0.1r1-137340	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106650:24351-24453	-	1,025	12.47	GCGGCGACGUGGGUGA		OtherRNA	ShortStack
ccm-b0.1r1-137343	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106650:40615-40925	.	84	1.02	AUGGGCCGUAGAUGCAUAGAUUGG		OtherRNA	ShortStack
ccm-b0.1r1-137344	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106650:42893-43327	.	62	0.75	AUCUGUGUUGGCUUGGUGUACACU		OtherRNA	ShortStack
ccm-b0.1r1-15589	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10667:33382-33610	+	161	1.96	CCGGUCGUCUCGUCCU		OtherRNA	ShortStack
ccm-b0.1r1-109017	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106755:1616-2097	.	212	2.58	GUGCUUGGGUGUCAUGU		OtherRNA	ShortStack
ccm-b0.1r1-75689	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106798:1295-1515	.	99	1.20	AACUUCGGAGACAAAAGUUUGACU		OtherRNA	ShortStack
ccm-b0.1r1-75691	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106798:3198-3409	-	450	5.47	UUUGUUGUAAGAACUGCUAGGUACC		OtherRNA	ShortStack
ccm-b0.1r1-120537	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106818:1864-2224	-	115	1.40	AGCCUGCAGGCGGUUGCGGAAAGUGUGAAACAGACG		OtherRNA	ShortStack
ccm-b0.1r1-120538	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106818:2311-4013	.	400	4.87	AUUUUCAAACAGACCCUAGAGCCU		OtherRNA	ShortStack
ccm-b0.1r1-120545	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106818:24320-24790	.	69	0.84	AACCAAGAAUGAACGACAACGUGU		OtherRNA	ShortStack
ccm-b0.1r1-70640	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106893:43060-43209	.	48	0.58	ACCGAACUUUUGAAACUUAAAAGA		OtherRNA	ShortStack
ccm-b0.1r1-70642	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106893:46915-47350	-	152	1.85	UCGUGGUGGUUUCUGAAUCUAUCUGUUUGAUUG		OtherRNA	ShortStack
ccm-b0.1r1-70645	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig106893:53121-54708	-	404	4.91	UGGGAUGCAGAUCUUUGUCAAGA		OtherRNA	ShortStack
ccm-b0.1r1-20101	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10699:2907-3108	+	64	0.78	AGUAAGACAAGUAGCCUGAGUGGAAAUUGUGACUUUUU		OtherRNA	ShortStack
ccm-b0.1r1-106447	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107170:63034-63246	.	45	0.55	ACUAUUUGUUUGUGACUCUAACAU		OtherRNA	ShortStack
ccm-b0.1r1-106448	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107170:64601-65096	.	43	0.52	AUUUCUCAGAUACUUUGACAAUGU		OtherRNA	ShortStack
ccm-b0.1r1-125841	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107179:3953-4751	.	72	0.88	GCACGUGGCUGCGAAC		OtherRNA	ShortStack
ccm-b0.1r1-102615	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10719:125183-125745	+	67	0.82	ACCGAACUGAGAAAAAAUAAAGAC		OtherRNA	ShortStack
ccm-b0.1r1-21802	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107206:9924-10029	-	114	1.39	CUCAGCGACGGACCGA		OtherRNA	ShortStack
ccm-b0.1r1-46474	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107213:7490-7978	+	49	0.60	UAUUUACUUUGAGAACGUG		OtherRNA	ShortStack
ccm-b0.1r1-46482	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107213:30697-30922	.	43	0.52	GUUGGUCGACGAUCUGGGGCAUCC		OtherRNA	ShortStack
ccm-b0.1r1-65600	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107248:4373-5065	.	91	1.11	AGACUCGAACCUGUAUAAUACCCA		OtherRNA	ShortStack
ccm-b0.1r1-56595	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107287:5924-6222	.	75	0.91	UUUGCCGGAUCAAGAGU		OtherRNA	ShortStack
ccm-b0.1r1-98667	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107341:3190-3623	.	97	1.18	GCUCCGAUCCGUUCGUAGAAUU		OtherRNA	ShortStack
ccm-b0.1r1-89725	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107369:19081-19332	.	76	0.93	ACCGGCGAACGAGAACGACGAGAG		OtherRNA	ShortStack
ccm-b0.1r1-99360	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107516:10001-10459	.	74	0.90	AGGUACUUGUGGUCUUAUGGAGAU		OtherRNA	ShortStack
ccm-b0.1r1-128712	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107534:3954-4175	-	75	0.91	AUGUGUGAUCUUGUUUGAUUUGUCC		OtherRNA	ShortStack
ccm-b0.1r1-9287	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107581:5630-5713	+	73	0.89	AGAAAGCGUCUGUUCACGUCAGGC		OtherRNA	ShortStack
ccm-b0.1r1-94303	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107586:1679-2112	-	57	0.69	CUUCUGUCUGAUUCCUUUCCUUACAAGGAGCU		OtherRNA	ShortStack
ccm-b0.1r1-87560	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10759:16820-17271	.	134	1.63	UCCAGCUCGGCCCACCU		OtherRNA	ShortStack
ccm-b0.1r1-127515	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10760:6229-6465	+	51	0.62	CCUCGGAUCGUAGCUUGCGCAUG		OtherRNA	ShortStack
ccm-b0.1r1-127516	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10760:8884-9353	+	55	0.67	AAGAGUUGGAUGCUCUGCU		OtherRNA	ShortStack
ccm-b0.1r1-66480	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107621:455-716	.	44	0.54	UUUCGACCAUCUGAAUAGUAAAC		OtherRNA	ShortStack
ccm-b0.1r1-54201	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107692:33081-33634	.	69	0.84	AUAAGUCAUUUCCCAACGUAGGACU		OtherRNA	ShortStack
ccm-b0.1r1-117251	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107764:1-824	-	769	9.36	AUUCCUCGUGUUGCACCCCU		OtherRNA	ShortStack
ccm-b0.1r1-18914	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107786:790-1062	.	72	0.88	AUGACGGAUCAAGAAUUUGAAAAGU		OtherRNA	ShortStack
ccm-b0.1r1-91795	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107800:3364-4097	-	72	0.88	AUCAGUCGAUGUAUGUAUAUAUAU		OtherRNA	ShortStack
ccm-b0.1r1-108029	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107925:5053-5759	.	68	0.83	AAUUUAAUAAGGUGUAGAUCCAUC		OtherRNA	ShortStack
ccm-b0.1r1-101279	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig107926:11903-12462	.	51	0.62	GAAACGAGGGCAUGGAAGGAUCUG		OtherRNA	ShortStack
ccm-b0.1r1-56630	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10793:7074-7321	+	55	0.67	GUCUAAGAGAGGUAUU		OtherRNA	ShortStack
ccm-b0.1r1-19959	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10797:728-1638	.	151	1.84	AUCAGAGUGGCGCAGCGGA		OtherRNA	ShortStack
ccm-b0.1r1-19962	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10797:21091-21418	+	323	3.93	UCAGGCGAUUGUGGGU		OtherRNA	ShortStack
ccm-b0.1r1-34079	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108075:2494-2970	.	178	2.17	AUCUUUGACUGACAGCCAACAUCC		OtherRNA	ShortStack
ccm-b0.1r1-85929	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108244:130-915	.	111	1.35	AAUUUAGAUCUGUGCCAUGGUAGC		OtherRNA	ShortStack
ccm-b0.1r1-120809	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108321:92-228	-	59	0.72	AAAUAUUUUAAAUUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.1r1-120810	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108321:317-388	-	58	0.71	AGGCUGUGAUGAUCUUUUUUGUAA		OtherRNA	ShortStack
ccm-b0.1r1-30941	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108357:4377-4744	.	44	0.54	AUUGGAGAGUAUGAGACAAAUGCU		OtherRNA	ShortStack
ccm-b0.1r1-46137	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108468:13282-13701	+	79	0.96	UAGGACUUUACACUGUGGUAAUGU		OtherRNA	ShortStack
ccm-b0.1r1-112255	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108472:9457-9613	.	61	0.74	AAAGUUGCUUCUGAUCCGAUCUGA		OtherRNA	ShortStack
ccm-b0.1r1-81633	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108484:21516-21938	.	48	0.58	ACGUAGACAACUGAGCCGGCCGGU		OtherRNA	ShortStack
ccm-b0.1r1-81634	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108484:22028-22869	.	248	3.02	AGUAGAAUUCUCGCGCGCCCGUGG		OtherRNA	ShortStack
ccm-b0.1r1-81637	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108484:33714-33923	.	42	0.51	AACGAACGAGUUAGAAUCUAGUU		OtherRNA	ShortStack
ccm-b0.1r1-115044	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108528:181-287	-	465	5.66	GAACCGUCUAGUAGCU		OtherRNA	ShortStack
ccm-b0.1r1-115045	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108528:439-820	-	697	8.48	GUUGACUUGUGGGCUU		OtherRNA	ShortStack
ccm-b0.1r1-115046	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108528:1011-1154	.	133	1.62	GCGACCCCAAGUCAGGCGAGACU		OtherRNA	ShortStack
ccm-b0.1r1-25886	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108578:931-1022	-	7,232	87.97	CGUCGUUCGGACCGCC		OtherRNA	ShortStack
ccm-b0.1r1-25887	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108578:1111-1183	-	2,519	30.64	CGCACAAUUGGUCAUCGCGCU		OtherRNA	ShortStack
ccm-b0.1r1-24267	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108652:597-1051	+	54	0.66	AAGAUGAUGACAGUGACACCGAA		OtherRNA	ShortStack
ccm-b0.1r1-11825	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108697:611-753	+	596	7.25	CUGGAGGUCUGUAGUUCGAUCCUGCAUGGGGGCA		OtherRNA	ShortStack
ccm-b0.1r1-75922	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108740:8876-9304	-	1,361	16.56	UGGCCGUGCUGAGAAUCUCUAACUCCGAGGCU		OtherRNA	ShortStack
ccm-b0.1r1-132153	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108924:1508-2221	+	62	0.75	CUACAUGGUGGAAAGGGUAAGACU		OtherRNA	ShortStack
ccm-b0.1r1-118648	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10893:7956-8468	.	736	8.95	CACAUGUUAAACGUCUGUAAU		OtherRNA	ShortStack
ccm-b0.1r1-118650	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10893:9488-9669	.	43	0.52	UUCCAAAUGGAACAGCGAGCCU		OtherRNA	ShortStack
ccm-b0.1r1-36238	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108961:11275-11700	+	48,026	584.21	UAAAAGGUCAAUGCGGGUUUUUCCCGUU		OtherRNA	ShortStack
ccm-b0.1r1-36245	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig108961:41246-41828	.	55	0.67	UAAGGAUUGACGGAUC		OtherRNA	ShortStack
ccm-b0.1r1-89792	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109:1293-1837	-	88	1.07	UUUUGGACCCAAGGCUU		OtherRNA	ShortStack
ccm-b0.1r1-57902	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109032:7447-7820	.	43	0.52	CAUGGCUUAUUUGGAUGAUGAUA		OtherRNA	ShortStack
ccm-b0.1r1-51428	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109089:13491-13949	.	71	0.86	UCCCCGCACCUCCACCA		OtherRNA	ShortStack
ccm-b0.1r1-127858	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109121:1631-2306	-	43	0.52	CGUGAUGUUGUUGAAU		OtherRNA	ShortStack
ccm-b0.1r1-44024	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109180:1232-1581	.	223	2.71	AACCAGGAAGAAUUGAACUCGGCC		OtherRNA	ShortStack
ccm-b0.1r1-41294	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109209:6804-6986	+	47	0.57	AGCUCCAGACUGUGGCCA		OtherRNA	ShortStack
ccm-b0.1r1-41295	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109209:9302-9750	+	73	0.89	AACCUGUCUUUUUUGAA		OtherRNA	ShortStack
ccm-b0.1r1-38453	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10925:14790-14975	-	219	2.66	GACGGUUUGGCCGAGUGGUCUAAGGC		OtherRNA	ShortStack
ccm-b0.1r1-38467	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10925:48667-48843	+	48	0.58	AUCUAUGGAUCGGCCGACAAAGGC		OtherRNA	ShortStack
ccm-b0.1r1-38468	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10925:50435-50619	+	199	2.42	GUUGAGAUGGCCGAGUUGG		OtherRNA	ShortStack
ccm-b0.1r1-38474	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10925:78779-80278	.	213	2.59	AUGUCAGCUCUAGUAUUGUAGAUC		OtherRNA	ShortStack
ccm-b0.1r1-38476	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10925:82423-82709	.	81	0.99	CGUCCUCCUCGCCGGA		OtherRNA	ShortStack
ccm-b0.1r1-38477	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10925:86902-87706	.	98	1.19	ACCGGAUUCUCCGGCUGCUCUGCACCU		OtherRNA	ShortStack
ccm-b0.1r1-137468	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109265:8285-8535	.	51	0.62	ACAGAAGGGUAAAAGU		OtherRNA	ShortStack
ccm-b0.1r1-137473	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109265:26072-27234	.	111	1.35	AUAUCUGAUAUGUGAGCCAUUGGU		OtherRNA	ShortStack
ccm-b0.1r1-137481	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109265:50992-51661	-	46	0.56	CUGAUGAGACUGUGUGCAAACCC		OtherRNA	ShortStack
ccm-b0.1r1-137484	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109265:54356-54803	-	147	1.79	AGUGUAGUAUCUGUUCUUAUU		OtherRNA	ShortStack
ccm-b0.1r1-137487	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109265:58571-58960	-	295	3.59	CUAUUGCAUCGGCCCGGCGCACCCUA		OtherRNA	ShortStack
ccm-b0.1r1-55355	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109294:3196-3452	.	61	0.74	ACCGAAUCGAAAAAUACUGAACCG		OtherRNA	ShortStack
ccm-b0.1r1-21518	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109380:6117-6194	+	121	1.47	CGAUGCUUGGACUCGCCU		OtherRNA	ShortStack
ccm-b0.1r1-47462	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109390:25-536	+	94	1.14	AAGCUCCCGAAGGACGUCGGAGCAUCUGCUCCGGCUGGUGACAA		OtherRNA	ShortStack
ccm-b0.1r1-113285	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109415:6462-6830	.	43	0.52	CGAUACCGGCGCCAGAACUAGUACC		OtherRNA	ShortStack
ccm-b0.1r1-97872	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109473:3705-4167	.	49	0.60	AAAAAGUAGGAUGUGAC		OtherRNA	ShortStack
ccm-b0.1r1-114520	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109480:812-1067	.	1,939	23.59	AUCGUGCUGAUAACGUGUUGUUAAC		OtherRNA	ShortStack
ccm-b0.1r1-114522	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109480:4439-5518	.	108	1.31	ACUGGUCUGAAUCUGCCGUGGUCC		OtherRNA	ShortStack
ccm-b0.1r1-114532	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109480:44508-45049	.	56	0.68	ACCGUACUUCGUAGUAUCCAACGA		OtherRNA	ShortStack
ccm-b0.1r1-114535	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109480:48942-49135	-	59	0.72	CGGGUCAUGAACUUCUUUU		OtherRNA	ShortStack
ccm-b0.1r1-114536	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109480:53007-53449	+	50	0.61	CAUGUACUGCUUGGAUUGCACUAAUGGCGCC		OtherRNA	ShortStack
ccm-b0.1r1-114537	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109480:53590-54151	+	67	0.82	AGAUUGUUGGAACAUCCA		OtherRNA	ShortStack
ccm-b0.1r1-42231	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10951:1794-2141	+	72	0.88	AUAGUGAACGAGAACC		OtherRNA	ShortStack
ccm-b0.1r1-106397	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109521:18080-19399	.	211	2.57	CUAUAUGACGAAACUACAAUCUCUCUUCUGAUU		OtherRNA	ShortStack
ccm-b0.1r1-106406	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109521:40245-40387	.	108	1.31	UUGGAUUGGUUAGCAGAUUCUUGGC		OtherRNA	ShortStack
ccm-b0.1r1-39547	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109524:151-485	-	194	2.36	UUUAGAAGAUCCCAAC		OtherRNA	ShortStack
ccm-b0.1r1-39549	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109524:1563-1777	-	496	6.03	UUCAUCUUUGUGAAGAUCCCA		OtherRNA	ShortStack
ccm-b0.1r1-39553	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109524:15986-16211	-	42	0.51	UCUGAAGGCACACACCAAUAUUUU		OtherRNA	ShortStack
ccm-b0.1r1-39555	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109524:24311-24779	+	53	0.65	CAAGGAUCUUCUGAAGAAUGAAU		OtherRNA	ShortStack
ccm-b0.1r1-24716	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10967:19099-19700	.	50	0.61	AACGUAGUGCUCAUUCUAAAAUAAC		OtherRNA	ShortStack
ccm-b0.1r1-24719	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10967:22176-23230	-	259	3.15	UUUGAACUCCAAAAUUUAACC		OtherRNA	ShortStack
ccm-b0.1r1-24721	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10967:25418-25569	+	1,220	14.84	GCCUUUAUAGCUCAGUGGUAGAGCUCCAGU		OtherRNA	ShortStack
ccm-b0.1r1-71436	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig109674:9408-9601	.	143	1.74	AGGAUAGAACGGAACGG		OtherRNA	ShortStack
ccm-b0.1r1-99346	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10968:18-512	+	18,750	228.08	AUUUUGAUCGUGCGGU		OtherRNA	ShortStack
ccm-b0.1r1-95926	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10997:2126-2409	-	536	6.52	UACAUCUGGACUCUACACCU		OtherRNA	ShortStack
ccm-b0.1r1-95927	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig10997:3160-3442	-	344	4.19	UCUGGACACUACAACU		OtherRNA	ShortStack
ccm-b0.1r1-123439	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11001:5840-6402	-	44	0.54	UGAACUCCUGAGUCAUGGCAUC		OtherRNA	ShortStack
ccm-b0.1r1-109106	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110010:11667-12198	.	67	0.82	GAAUGGUUCAGCACAUAUAGGUUC		OtherRNA	ShortStack
ccm-b0.1r1-86538	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110114:2151-2325	+	77	0.94	AAAGCUCGAACGACCGU		OtherRNA	ShortStack
ccm-b0.1r1-15087	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110128:16012-16033	-	44	0.54	CUUUGUUGCUUUGAUUAA		OtherRNA	ShortStack
ccm-b0.1r1-70523	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110204:4273-4608	.	42	0.51	AUUCGAAUAUCUGACUUGUAGUGU		OtherRNA	ShortStack
ccm-b0.1r1-107281	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11028:19898-20791	-	105	1.28	ACACUUUUCCGAUGUGAGAUACUC		OtherRNA	ShortStack
ccm-b0.1r1-107282	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11028:21195-21487	.	133	1.62	AGUUUGUGACUCUAGCAUUACUCC		OtherRNA	ShortStack
ccm-b0.1r1-107283	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11028:24922-25186	.	68	0.83	CGUGACCCGAUUCUGGACUAUCAG		OtherRNA	ShortStack
ccm-b0.1r1-107287	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11028:36230-36781	.	48	0.58	UCCGCUGUAUCACAUC		OtherRNA	ShortStack
ccm-b0.1r1-107290	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11028:40802-40924	+	116	1.41	CUUAUGGGGUCGUUUCUGUA		OtherRNA	ShortStack
ccm-b0.1r1-108347	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110282:1385-1838	.	55	0.67	AAAUAACUUGUAGAUCUCUCUAUU		OtherRNA	ShortStack
ccm-b0.1r1-124863	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110289:8265-8890	.	48	0.58	AUUGUAUCUCGAGAAGAUGUGUACC		OtherRNA	ShortStack
ccm-b0.1r1-51343	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110291:941-1916	+	100	1.22	UGGUUGGCUCUGCUUGGAGG		OtherRNA	ShortStack
ccm-b0.1r1-24289	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110299:6-105	-	123	1.50	GGUGUCGUGGUGUAGUUGGUUAUC		OtherRNA	ShortStack
ccm-b0.1r1-106999	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110312:158-351	+	97	1.18	AUAACCGAGGCGCGUCUAUUG		OtherRNA	ShortStack
ccm-b0.1r1-107003	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110312:12567-13507	-	153	1.86	AUACCGAUUGGCUGUCCUCAACAGUA		OtherRNA	ShortStack
ccm-b0.1r1-35939	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110370:18814-18996	.	165	2.01	CAUUCUGUUCAACGAAC		OtherRNA	ShortStack
ccm-b0.1r1-35940	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110370:26718-27091	-	148	1.80	AUAUUUAAAUCUGUUUCUGAGAAC		OtherRNA	ShortStack
ccm-b0.1r1-35943	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110370:29400-30176	.	64	0.78	AAACCCCAAUUUGUAAUCAAGCUG		OtherRNA	ShortStack
ccm-b0.1r1-35944	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110370:32425-33065	.	62	0.75	CAUACCCAAACGAUAAUCGUCUGU		OtherRNA	ShortStack
ccm-b0.1r1-107700	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11043:18488-19106	+	51	0.62	UGACGAACUGGUGGUGCACUAUCUCUGCC		OtherRNA	ShortStack
ccm-b0.1r1-83643	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110433:26-509	+	75	0.91	AGGAUGAGGACGAGGAUGG		OtherRNA	ShortStack
ccm-b0.1r1-83644	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110433:5156-5547	-	54	0.66	UACAGUACCUUAACGAGAUCAAGGAUUCU		OtherRNA	ShortStack
ccm-b0.1r1-16315	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110537:22714-23235	+	62	0.75	CAUUUGGAUGGUGCUCUAAA		OtherRNA	ShortStack
ccm-b0.1r1-16318	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110537:31690-32044	+	457	5.56	ACCGAGGCGCGUCUAUUGCUG		OtherRNA	ShortStack
ccm-b0.1r1-16319	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110537:32178-32636	.	65	0.79	AAUUUGUAUAUUGUAGAUUUGCACU		OtherRNA	ShortStack
ccm-b0.1r1-80901	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110594:13396-14010	.	73	0.89	AUUAUCGUCUGUUUUUGUCUGUGC		OtherRNA	ShortStack
ccm-b0.1r1-69152	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11063:116-729	.	62	0.75	UAAUUCCCUGGAGAGAUCUGCA		OtherRNA	ShortStack
ccm-b0.1r1-69163	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11063:23632-24052	+	348	4.23	UUUGUGGUAAGAACUGCCAGGUACC		OtherRNA	ShortStack
ccm-b0.1r1-38543	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110705:4303-4685	.	49	0.60	AAGAGUGAAUGUCGGUAGGCAUA		OtherRNA	ShortStack
ccm-b0.1r1-127062	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110727:1867-2045	-	296	3.60	UGUUUGAGAUUCUGUU		OtherRNA	ShortStack
ccm-b0.1r1-127063	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110727:2143-2183	-	50	0.61	CGGAAACUGGAGGAAUUGAGCUUUUGUCU		OtherRNA	ShortStack
ccm-b0.1r1-49310	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110728:6581-7226	+	44	0.54	UUCUUCGAGAACAUGGACGCC		OtherRNA	ShortStack
ccm-b0.1r1-17722	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11077:14151-14326	.	88	1.07	AUCACGGACCGAAUCAUUCAAAAC		OtherRNA	ShortStack
ccm-b0.1r1-17724	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11077:21066-22051	-	1,074	13.07	GUCAGGAUGGCCGAGUGGUCUAAGGC		OtherRNA	ShortStack
ccm-b0.1r1-131179	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110791:24424-24443	+	284	3.46	AGAACUGAAGAACGCU		OtherRNA	ShortStack
ccm-b0.1r1-117488	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110814:445-1410	.	465	5.66	AUGCGGCGACGGUGACGGACGC		OtherRNA	ShortStack
ccm-b0.1r1-22208	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110815:529-1008	.	76	0.93	AUGCUAUCACUGCAGUCUGUAGAU		OtherRNA	ShortStack
ccm-b0.1r1-118694	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110967:902-1236	.	56	0.68	GGACAGUCGGGGGCAG		OtherRNA	ShortStack
ccm-b0.1r1-63342	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig110975:3645-3668	+	96	1.17	UUUGGACUUUUCAAACU		OtherRNA	ShortStack
ccm-b0.1r1-48467	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111064:11925-12464	.	63	0.77	CCCCAAUGUAGCACUUAUAGUCAU		OtherRNA	ShortStack
ccm-b0.1r1-109124	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11110:3089-3339	+	13,606	165.51	AUCCUAUUACGUUGGCCUUCGGGAUC		OtherRNA	ShortStack
ccm-b0.1r1-102927	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11111:36390-36939	+	42	0.51	GAAAUGCGGGCACAGAGC		OtherRNA	ShortStack
ccm-b0.1r1-103229	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111111:3155-3274	.	82	1.00	AGCCCAUUUAGAUUCGGUCACACG		OtherRNA	ShortStack
ccm-b0.1r1-23818	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11114:3712-4194	.	46	0.56	AUUCGUCAAUGACUGUUUCGAGGU		OtherRNA	ShortStack
ccm-b0.1r1-23819	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11114:6089-6421	.	67	0.82	ACCGGAUUGUUAGGGGGGUAGAUA		OtherRNA	ShortStack
ccm-b0.1r1-23830	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11114:53729-54040	.	63	0.77	ACGGUCUCCAAUAUUACACUUUGA		OtherRNA	ShortStack
ccm-b0.1r1-60954	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111213:6782-7010	.	49	0.60	AUUCCAUCAGUCCCUGUAAACAUG		OtherRNA	ShortStack
ccm-b0.1r1-34304	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111218:18574-18591	+	50	0.61	CUCUCUCACCCCACCA		OtherRNA	ShortStack
ccm-b0.1r1-101530	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11125:3620-4218	-	259	3.15	AUUUGAAGAUCUUUGUGUCUCUCUGGCAGGGAAC		OtherRNA	ShortStack
ccm-b0.1r1-101531	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11125:4475-4696	-	131	1.59	AGAAAGAUUGAUCUGAAUGU		OtherRNA	ShortStack
ccm-b0.1r1-101532	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11125:4929-5254	-	152	1.85	UGAAGAGGACUGUGAAU		OtherRNA	ShortStack
ccm-b0.1r1-100606	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111279:3061-3371	+	100	1.22	GUUCUUGCCGGUCUCUGGAGAUGGAU		OtherRNA	ShortStack
ccm-b0.1r1-100607	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111279:3539-4218	+	117	1.42	UGCGGAUGGGGACGAAGGG		OtherRNA	ShortStack
ccm-b0.1r1-98972	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111304:3620-3727	+	121	1.47	CCCCUCUCUCUAGCGCCA		OtherRNA	ShortStack
ccm-b0.1r1-57418	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11139:4499-4811	.	56	0.68	ACAUGGACCAACAAUCUGAAUUGU		OtherRNA	ShortStack
ccm-b0.1r1-133098	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111408:549-1057	.	89	1.08	ACGAGAACGGAUUUCACACCCACC		OtherRNA	ShortStack
ccm-b0.1r1-109489	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111469:419-565	-	71	0.86	AAAAAUUACUCUCGUCAA		OtherRNA	ShortStack
ccm-b0.1r1-75890	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111531:6824-7142	-	56	0.68	CCGUUAAUUAAUGGACGUGUGUC		OtherRNA	ShortStack
ccm-b0.1r1-73736	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111547:149-238	+	93	1.13	UCCUGGGCAUCAACACCA		OtherRNA	ShortStack
ccm-b0.1r1-31899	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111609:9929-10021	-	189	2.30	GGUGUCGUCGUGUAGUUGGUUAUC		OtherRNA	ShortStack
ccm-b0.1r1-26528	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111649:1031-2354	.	83	1.01	AGUGACCCUACUCUGCCAUACAGA		OtherRNA	ShortStack
ccm-b0.1r1-86203	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111665:82-391	-	10,560	128.46	UCCGUUGUAGUCUAGUUGGUUAGGAUA		OtherRNA	ShortStack
ccm-b0.1r1-107158	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111751:7-334	.	61	0.74	AGAGUCUGAAUGGUUAGUAAGUUC		OtherRNA	ShortStack
ccm-b0.1r1-128960	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111757:4731-4759	+	59	0.72	UCUUCAGUACGGACUAU		OtherRNA	ShortStack
ccm-b0.1r1-121957	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111904:29858-30001	.	88	1.07	AAUGAUCAGAAAGAGUGUGUGUGC		OtherRNA	ShortStack
ccm-b0.1r1-47387	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111911:240-432	.	47	0.57	AUGUGUGAUCUUGUUUAAUUCGUC		OtherRNA	ShortStack
ccm-b0.1r1-49331	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111918:2608-3329	.	84	1.02	GAACGGACGGAGUACUAAAACUGC		OtherRNA	ShortStack
ccm-b0.1r1-49332	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111918:4303-4540	.	86	1.05	CGGUAGAGAAUGAACAGUGGUACU		OtherRNA	ShortStack
ccm-b0.1r1-49334	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111918:5369-6067	-	107	1.30	ACCGAUCUCCACGCUGACCAGCCU		OtherRNA	ShortStack
ccm-b0.1r1-49336	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111918:8587-9226	-	123	1.50	AUUCGGUCGAUUCGAUAAGAGUAGC		OtherRNA	ShortStack
ccm-b0.1r1-48648	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig111930:145-819	.	90	1.10	GCCGACGACGACUGAUGACAGUGU		OtherRNA	ShortStack
ccm-b0.1r1-90924	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11198:17-708	+	49	0.60	GGUGGUCGAGGCUGAGAAGAA		OtherRNA	ShortStack
ccm-b0.1r1-47058	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112007:2157-2562	.	350	4.26	AAGUUAAGGGAGUAGGAACCAUU		OtherRNA	ShortStack
ccm-b0.1r1-47063	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112007:15954-16110	-	57	0.69	AAUGUCUACUGGUGAGAAUAAUAGU		OtherRNA	ShortStack
ccm-b0.1r1-47068	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112007:31345-32851	-	76	0.93	CCAUGUUCUCGGGCAU		OtherRNA	ShortStack
ccm-b0.1r1-52499	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11201:2773-2916	-	110	1.34	GCGGGGAUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.1r1-52515	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11201:44825-45766	.	373	4.54	AAAUCUGUUGGGCUUUGU		OtherRNA	ShortStack
ccm-b0.1r1-52521	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11201:52778-52934	.	63	0.77	AGUCUCCAAUGCGACACUUUGACA		OtherRNA	ShortStack
ccm-b0.1r1-10143	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112012:30-484	.	136	1.65	UUCCGGCAGAACUACUGAUGUUCU		OtherRNA	ShortStack
ccm-b0.1r1-42445	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112091:3625-3863	.	63	0.77	AUCUGCACUGUUAAAAUUUUAUCU		OtherRNA	ShortStack
ccm-b0.1r1-84987	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112092:20-369	.	85	1.03	CCGACGGUAGCCUUUAGCAUUGGC		OtherRNA	ShortStack
ccm-b0.1r1-21549	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112122:1908-2206	.	42	0.51	AGGGAGACAGUAGCUUCCGUGGCC		OtherRNA	ShortStack
ccm-b0.1r1-120779	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112252:11292-11949	-	200	2.43	ACGGCUCCGUCGUGGCU		OtherRNA	ShortStack
ccm-b0.1r1-58069	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112368:8802-9101	.	70	0.85	UUGCGUGCCUUUGACUCUGAUUGG		OtherRNA	ShortStack
ccm-b0.1r1-110004	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11239:578-879	+	185	2.25	ACGUAUGCUUGGGUGUCAUGC		OtherRNA	ShortStack
ccm-b0.1r1-107173	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112429:6-329	+	223	2.71	UUUCCGGAAAGUGCUCGCACGC		OtherRNA	ShortStack
ccm-b0.1r1-93642	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112452:748-1623	.	88	1.07	AGUGAAUCGGCUAACA		OtherRNA	ShortStack
ccm-b0.1r1-103912	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11248:1204-1313	.	43	0.52	AUUGGCGGAGAUUCGUAUUCUGGA		OtherRNA	ShortStack
ccm-b0.1r1-41171	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112586:5677-6424	+	56	0.68	UUCAAGAGGCGAAGGAAUU		OtherRNA	ShortStack
ccm-b0.1r1-41174	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112586:16485-17048	.	59	0.72	ACCGCUAGUGGCACCGUACUCUGG		OtherRNA	ShortStack
ccm-b0.1r1-128830	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112589:488-1081	.	158	1.92	AACCCGCAGCCGUCGGAUAUCAGA		OtherRNA	ShortStack
ccm-b0.1r1-133490	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112650:4996-5813	.	118	1.44	CGGAUCUGCGGAGCCCUGCCC		OtherRNA	ShortStack
ccm-b0.1r1-63752	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112700:6583-6878	.	180	2.19	AAGAAUGAUAAUGUAAGACUGUAAU		OtherRNA	ShortStack
ccm-b0.1r1-9202	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112760:16605-17149	.	68	0.83	AUGACAAUAAGCUUGAGCUCGUG		OtherRNA	ShortStack
ccm-b0.1r1-9203	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112760:17254-18455	.	227	2.76	AAAACAGUUUACUUCGGUCGGGCC		OtherRNA	ShortStack
ccm-b0.1r1-9204	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112760:18583-18932	.	81	0.99	GUGGACGUGCCGGAGC		OtherRNA	ShortStack
ccm-b0.1r1-25307	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112890:11103-11446	.	49	0.60	AUUGUCAGGUACUUCAAAUUAUUC		OtherRNA	ShortStack
ccm-b0.1r1-102376	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112935:3-478	-	53	0.65	UAUCAGGACUACUUUC		OtherRNA	ShortStack
ccm-b0.1r1-62779	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112953:1080-1225	-	69	0.84	GUUAAAAUUCCUGAAC		OtherRNA	ShortStack
ccm-b0.1r1-62780	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112953:3072-3263	-	90	1.10	ACCCUGUCGCACCACGAGGUGCUG		OtherRNA	ShortStack
ccm-b0.1r1-62781	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112953:3785-3950	-	196	2.38	UCUCGGCAAUGGAUAUU		OtherRNA	ShortStack
ccm-b0.1r1-62782	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112953:4187-4522	-	5,617	68.33	AUAACAGGUCUGUGAUGC		OtherRNA	ShortStack
ccm-b0.1r1-62783	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112953:4605-4745	-	6,135	74.63	CAUAGUAAGGAUUGACAGA		OtherRNA	ShortStack
ccm-b0.1r1-62784	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112953:4823-5041	-	63	0.77	AACGAAAGUUGGGGGCUCGG		OtherRNA	ShortStack
ccm-b0.1r1-52316	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112969:170-590	.	69	0.84	ACGUGUCGGACUUUUUGGGACGGA		OtherRNA	ShortStack
ccm-b0.1r1-20544	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig112972:7-96	.	61	0.74	UCUUUGCUCGUAGAUAAUUCGUCC		OtherRNA	ShortStack
ccm-b0.1r1-61303	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113:43748-44171	.	69	0.84	ACGGAUUCAUUUUUUUGGAAAAUG		OtherRNA	ShortStack
ccm-b0.1r1-55182	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113029:6878-7016	.	73	0.89	GCGCUCUUAGUUCAGU		OtherRNA	ShortStack
ccm-b0.1r1-10289	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11303:1698-2032	-	44	0.54	CAGAUCGGAGAGAAAUGGGCAGC		OtherRNA	ShortStack
ccm-b0.1r1-10300	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11303:36144-36601	.	201	2.45	UUUGCAUAAAUAGACUCCGGC		OtherRNA	ShortStack
ccm-b0.1r1-9736	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113115:70744-71129	.	47	0.57	CACUCUCAUGUAGACAAUCGAUU		OtherRNA	ShortStack
ccm-b0.1r1-17385	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113120:14589-14938	-	119	1.45	CAAUGUGAUUUCUGCG		OtherRNA	ShortStack
ccm-b0.1r1-116735	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113148:9-335	-	50	0.61	GCUGCCGUGAUCGGCG		OtherRNA	ShortStack
ccm-b0.1r1-116736	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113148:921-1179	-	61	0.74	AUGAAGAGUGUAGGAAAAGCUGCUCUUAAGAUGGUUGAGGAAGU		OtherRNA	ShortStack
ccm-b0.1r1-28188	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113170:587-1640	-	305	3.71	AUUAUCGUCUGUGUGAAGUAUGGG		OtherRNA	ShortStack
ccm-b0.1r1-28189	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113170:2880-4289	-	516	6.28	AGGGCACAGAACUUCCUCC		OtherRNA	ShortStack
ccm-b0.1r1-28190	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113170:10564-10829	+	45	0.55	AAGUAUUGUAGGCUUUGUUGUGGC		OtherRNA	ShortStack
ccm-b0.1r1-93462	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113209:5672-6039	+	83	1.01	AAAACAGAACACCAUAGGUACCCA		OtherRNA	ShortStack
ccm-b0.1r1-90162	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113236:11287-11477	+	83	1.01	CGGAUGAAGUAGUACAUAAUAUACU		OtherRNA	ShortStack
ccm-b0.1r1-66428	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11326:36762-37025	.	69	0.84	AUCCAGUUGAACCGUUAGGAUCAG		OtherRNA	ShortStack
ccm-b0.1r1-66431	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11326:50297-50930	.	195	2.37	ACUGACUUUAGCUUUUUUGACUAA		OtherRNA	ShortStack
ccm-b0.1r1-126857	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113335:17019-18341	+	56	0.68	CAUGUUCGGGUCCGACGUGGGCGAG		OtherRNA	ShortStack
ccm-b0.1r1-22528	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113345:16698-17127	-	70	0.85	AUAUGAUCAAGGGAAAGACACCAGAAG		OtherRNA	ShortStack
ccm-b0.1r1-22529	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113345:17835-18227	-	135	1.64	ACAUGAUCGAGGAUGACUGUGCGGACU		OtherRNA	ShortStack
ccm-b0.1r1-79661	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113495:17144-17745	.	102	1.24	UCGUCUGUAGUCCAAU		OtherRNA	ShortStack
ccm-b0.1r1-36077	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113536:1556-1674	-	215	2.62	GGCGAUGAUGAGGGUAUAUAUGUAAAUCUC		OtherRNA	ShortStack
ccm-b0.1r1-14955	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113551:9-830	.	61	0.74	UGGACCCAAGGCUUGCU		OtherRNA	ShortStack
ccm-b0.1r1-90764	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113568:13113-13434	.	61	0.74	AUUGCGGCGACGUGGGC		OtherRNA	ShortStack
ccm-b0.1r1-90767	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113568:18577-19137	.	94	1.14	GGAGAUAUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.1r1-134836	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113577:20813-21025	.	84	1.02	AAGUUGUUGCGUUAGACGGUAGGU		OtherRNA	ShortStack
ccm-b0.1r1-68612	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1137:3-146	.	122	1.48	UAAGAACCGAACCAUAGAAGAU		OtherRNA	ShortStack
ccm-b0.1r1-125492	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11373:24081-24279	.	97	1.18	AGAGAUUGGCGUUAGCGUUUGACC		OtherRNA	ShortStack
ccm-b0.1r1-125514	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11373:102738-102817	-	8,165	99.32	UCCGUUGUAGUCUAGUUGGUCAGGAUA		OtherRNA	ShortStack
ccm-b0.1r1-112926	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113810:9223-9398	.	49	0.60	AUUCGAGUGCGGCUAUCAGAAGUG		OtherRNA	ShortStack
ccm-b0.1r1-112927	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113810:13664-14189	-	69	0.84	AUAAGUGUGAUUGAAAGUGAUGAU		OtherRNA	ShortStack
ccm-b0.1r1-112929	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig113810:18732-19410	-	50	0.61	AUGUCGACGACAAGACU		OtherRNA	ShortStack
ccm-b0.1r1-23110	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114042:81-632	.	86	1.05	GCGGGGAUGGAGCGAC		OtherRNA	ShortStack
ccm-b0.1r1-10552	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114101:1752-2030	-	252	3.07	GUUUCCCUUAGGAUAGCUGA		OtherRNA	ShortStack
ccm-b0.1r1-51738	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114158:352-1246	+	91	1.11	UUAGUUCGCUGGGCGGCUUCUGUU		OtherRNA	ShortStack
ccm-b0.1r1-53027	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114168:58-385	.	45	0.55	AAAAACCGGAUCGGACUGGGAACC		OtherRNA	ShortStack
ccm-b0.1r1-36208	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11426:11134-12731	.	289	3.52	UUCGGGGCGUGGACCA		OtherRNA	ShortStack
ccm-b0.1r1-37964	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114288:941-1479	-	268	3.26	UUGAUCCUUGCUGUAGCAGCGG		OtherRNA	ShortStack
ccm-b0.1r1-24012	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114483:3693-4326	+	105	1.28	AAGAGAGAAGUCUGACGUGCACCG		OtherRNA	ShortStack
ccm-b0.1r1-28433	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114489:1752-1940	.	102	1.24	AUUUAUUCCGAUUAGGCUCAGGUC		OtherRNA	ShortStack
ccm-b0.1r1-61321	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11449:464-703	.	99	1.20	AGUAGUACCUGAAUUUCAAAUCCU		OtherRNA	ShortStack
ccm-b0.1r1-16715	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114502:12297-12383	-	48	0.58	GGGGGUGUAGCUCAUG		OtherRNA	ShortStack
ccm-b0.1r1-61047	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114590:7520-7863	+	73	0.89	UUUAGAGACGACGUGCU		OtherRNA	ShortStack
ccm-b0.1r1-61048	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114590:8204-8352	+	49	0.60	AUCUUAAAUCUCUGAUU		OtherRNA	ShortStack
ccm-b0.1r1-61049	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114590:8445-8612	+	96	1.17	AGGAGUAGAUGUCUAACAUUCUGUUUUGCAG		OtherRNA	ShortStack
ccm-b0.1r1-46522	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114597:9347-9537	+	55	0.67	GGGGCGUGUUCUACCUGAG		OtherRNA	ShortStack
ccm-b0.1r1-63278	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114613:16232-16546	.	67	0.82	CACUUAUGGUCUGUUUGGGAAUAAC		OtherRNA	ShortStack
ccm-b0.1r1-63279	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114613:20911-21168	-	43	0.52	UUAUGGCUGGUGUGCUCG		OtherRNA	ShortStack
ccm-b0.1r1-63281	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114613:22399-22665	.	58	0.71	AAACCCACAUGUUAUAAAGGACCA		OtherRNA	ShortStack
ccm-b0.1r1-53399	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114708:23718-24230	.	55	0.67	AAUAAUUCCACCAAUCGAUCCGGC		OtherRNA	ShortStack
ccm-b0.1r1-84835	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114782:1856-2318	.	99	1.20	AUUGGAAUUGAGGACC		OtherRNA	ShortStack
ccm-b0.1r1-34483	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114832:1233-2129	.	272	3.31	UGGGUUGCUGCCCUGGACA		OtherRNA	ShortStack
ccm-b0.1r1-22641	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114842:1099-1486	-	53	0.65	AUGUGUGAUCUUGUUUGAUUUGUCC		OtherRNA	ShortStack
ccm-b0.1r1-22644	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114842:6160-6365	.	751	9.14	GGGUCCAUAGCUCAGUGGUAGAGCAUUUGACUG		OtherRNA	ShortStack
ccm-b0.1r1-9104	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114862:15689-16000	.	92	1.12	AAAACCGCAGCAACUCUAGAAGUC		OtherRNA	ShortStack
ccm-b0.1r1-48793	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig114904:1058-1532	+	54	0.66	GUGCACGUGUUCGCGUUGACUCAAUGGCUAAAGUUGCUGAUCU		OtherRNA	ShortStack
ccm-b0.1r1-43024	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11495:2987-3336	+	314	3.82	UCUGAUCCCUACGAGAA		OtherRNA	ShortStack
ccm-b0.1r1-43025	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11495:3422-4176	+	235	2.86	GAGAGUGUCUCCAAGUCUGUCCCU		OtherRNA	ShortStack
ccm-b0.1r1-43027	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11495:5171-6161	+	314	3.82	CCCAGUGCUCUGAAUA		OtherRNA	ShortStack
ccm-b0.1r1-43028	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11495:8828-9228	-	48	0.58	AUUGUUUGUGAUGCAUAGAAAAUC		OtherRNA	ShortStack
ccm-b0.1r1-61665	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11497:4481-4625	+	72	0.88	GAUGUGGCUGAUGAUUUCU		OtherRNA	ShortStack
ccm-b0.1r1-61666	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11497:5161-5238	+	73	0.89	CAGACUGUCUAUCUCAU		OtherRNA	ShortStack
ccm-b0.1r1-61667	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11497:8594-8969	+	160	1.95	AGACUGCUGAAGGCCUUAAGGCUCC		OtherRNA	ShortStack
ccm-b0.1r1-61668	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11497:9110-9525	+	133	1.62	ACAAAGACGGCGUGCCACUGGGCA		OtherRNA	ShortStack
ccm-b0.1r1-61669	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11497:9672-10407	+	112	1.36	UAUGGUCAUAUCUGGAUU		OtherRNA	ShortStack
ccm-b0.1r1-61670	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11497:13942-14145	+	59	0.72	AUGUACUGCGAUUUGUGCUCG		OtherRNA	ShortStack
ccm-b0.1r1-15982	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115011:1859-2477	-	52	0.63	AAAUGGAUAGUGAACUGCGUGAAAUGAUUGCUG		OtherRNA	ShortStack
ccm-b0.1r1-114925	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115012:2780-2877	.	55	0.67	AGAUAUUUCCAAACUCUUUACAAU		OtherRNA	ShortStack
ccm-b0.1r1-34772	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115014:634-1141	.	112	1.36	CCCACGGUGGGCGCCA		OtherRNA	ShortStack
ccm-b0.1r1-126438	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115088:9016-9194	+	42	0.51	UAAGUCAGGACCUAAG		OtherRNA	ShortStack
ccm-b0.1r1-18195	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115110:26-995	+	47	0.57	ACAGAUUGAGGGCUCC		OtherRNA	ShortStack
ccm-b0.1r1-106419	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115111:7504-8062	.	93	1.13	AAGGGCCUCUUUGAGAAUAGCGUU		OtherRNA	ShortStack
ccm-b0.1r1-106424	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115111:20553-21010	+	1,800	21.90	UUUUCGUUUUGAUUACGGCCUCGAACAAAUCGCAACAUUC		OtherRNA	ShortStack
ccm-b0.1r1-67556	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115129:1983-2331	-	739	8.99	AGGCUGUGAUGAUACUCUUUCUGUGU		OtherRNA	ShortStack
ccm-b0.1r1-67557	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115129:2422-2779	-	44	0.54	AUUUCUUGCUUUUUCAUGUAGACA		OtherRNA	ShortStack
ccm-b0.1r1-67562	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115129:7123-7223	-	68	0.83	CCCUCUGGAAACACAGAUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.1r1-67563	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115129:8388-8509	-	94	1.14	AGCCAUGAUGAUACCGAUCUACUGAUU		OtherRNA	ShortStack
ccm-b0.1r1-67564	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115129:9115-9402	-	95	1.16	GUCGUAGUUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.1r1-67566	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115129:14657-14694	-	195	2.37	GGAAACACGGAUCUGAGCCCU		OtherRNA	ShortStack
ccm-b0.1r1-115262	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115206:18979-19654	-	46	0.56	UUGGAAAGGACAAGGG		OtherRNA	ShortStack
ccm-b0.1r1-34540	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115217:2954-3152	+	62	0.75	CCGGGACGUGGCGGGA		OtherRNA	ShortStack
ccm-b0.1r1-74146	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115221:14-780	-	47	0.57	ACGAUUUUGAAGGAACUGA		OtherRNA	ShortStack
ccm-b0.1r1-74147	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115221:856-1131	.	89	1.08	AAUACAUCUCAAUUACAAAGGACC		OtherRNA	ShortStack
ccm-b0.1r1-114890	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115234:29687-29779	+	139	1.69	UUGUUGCUUGAUUCCU		OtherRNA	ShortStack
ccm-b0.1r1-114891	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115234:30620-30802	.	47	0.57	AUUUUGAAAAAACUAUCUGACGGU		OtherRNA	ShortStack
ccm-b0.1r1-85653	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115252:1-554	+	61	0.74	AGGUCGGAGAUCCCGAAAGCCCUGGGAGA		OtherRNA	ShortStack
ccm-b0.1r1-46761	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115273:45-143	+	131	1.59	ACAAGAUAAAAUGGAUUAAAGAAGC		OtherRNA	ShortStack
ccm-b0.1r1-68678	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115300:2305-3217	.	82	1.00	GUUGGAGUCGGCGACUUGCUG		OtherRNA	ShortStack
ccm-b0.1r1-68684	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115300:17239-17693	.	108	1.31	CUCUAGUCCGACUUUGA		OtherRNA	ShortStack
ccm-b0.1r1-68692	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115300:31457-31628	.	45	0.55	UCGUCUGGGAUAACAAU		OtherRNA	ShortStack
ccm-b0.1r1-68698	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115300:38861-39360	.	56	0.68	AGUAAAGUAUUUGACCGGUAGACU		OtherRNA	ShortStack
ccm-b0.1r1-68700	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115300:61231-61504	.	71	0.86	AACAUAUUUUUUAACGUGACUGGA		OtherRNA	ShortStack
ccm-b0.1r1-98357	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115492:42761-43052	.	88	1.07	AAUGACUUGUCAUUGUAGGACUUG		OtherRNA	ShortStack
ccm-b0.1r1-69730	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115506:6742-7028	-	76	0.93	CGUGUGCUUCGAGGACUUCAG		OtherRNA	ShortStack
ccm-b0.1r1-103888	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115512:5415-6073	-	51	0.62	CCCCAACAGAAACUCCUGUAGUUAAGGAAUCGGAAC		OtherRNA	ShortStack
ccm-b0.1r1-83405	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115515:1-307	.	55	0.67	AUUGCGCGGGCAGGGAAGCAUCCU		OtherRNA	ShortStack
ccm-b0.1r1-83412	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115515:20213-20357	-	55	0.67	CUGGAAACGACUCAGU		OtherRNA	ShortStack
ccm-b0.1r1-83413	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115515:24887-25287	+	43	0.52	GUUCUCUGUUCUCUCU		OtherRNA	ShortStack
ccm-b0.1r1-21784	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11554:29072-30390	.	155	1.89	AGAGGACUGUGGUCGUGACCAC		OtherRNA	ShortStack
ccm-b0.1r1-46766	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11556:4621-5095	+	248	3.02	UCGGAUUGCUCUUCUGAUUUCAGA		OtherRNA	ShortStack
ccm-b0.1r1-83140	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11559:16055-16301	-	103	1.25	UUGUUGCUCUGAUUCCCA		OtherRNA	ShortStack
ccm-b0.1r1-79168	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115676:5525-6292	.	143	1.74	GGGAUGGGCCGGCCGG		OtherRNA	ShortStack
ccm-b0.1r1-98514	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115755:29-157	-	71	0.86	AUACUUAGAGCACUGGAAAUACCC		OtherRNA	ShortStack
ccm-b0.1r1-58446	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115819:3978-4286	+	54	0.66	CAUUGCUGUGGAACAAGAGUG		OtherRNA	ShortStack
ccm-b0.1r1-98906	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115923:2075-2488	-	108	1.31	CGAGACAGAGCUCAGCAAG		OtherRNA	ShortStack
ccm-b0.1r1-54325	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig115984:1118-1290	-	51	0.62	AAACACGGUGAAGGCUGUAGCAGUUCUUAACA		OtherRNA	ShortStack
ccm-b0.1r1-132968	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116033:6328-6817	-	133	1.62	UUUUACUGGUUCACCCUCAUUUGCCCACAAUU		OtherRNA	ShortStack
ccm-b0.1r1-132970	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116033:7405-8876	.	145	1.76	AUUUUGACCGUCACUUAUUUUGGA		OtherRNA	ShortStack
ccm-b0.1r1-129224	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116109:6-747	+	62	0.75	ACGGAAUCCGCAGACUCGACCACG		OtherRNA	ShortStack
ccm-b0.1r1-49349	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116222:2097-2399	-	72	0.88	AGGGCUUUAUGGGACAGAUGAAGU		OtherRNA	ShortStack
ccm-b0.1r1-49350	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116222:3558-4475	.	83	1.01	AAACUGCAGCAAUUCUAGAAGUCU		OtherRNA	ShortStack
ccm-b0.1r1-112462	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116248:3277-3592	+	99	1.20	ACCGGUAGACUUGAAA		OtherRNA	ShortStack
ccm-b0.1r1-95710	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116277:12890-13383	.	49	0.60	CCGGUCGUCUCGUCCG		OtherRNA	ShortStack
ccm-b0.1r1-70726	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116366:2-352	-	33,057	402.12	GUCGUUGUAGUAUAGUGGUAAGUAUUCCCGCCU		OtherRNA	ShortStack
ccm-b0.1r1-67701	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116433:2389-2527	+	50	0.61	AAACAAGAUCACACAUGACUAUG		OtherRNA	ShortStack
ccm-b0.1r1-67711	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116433:30723-30986	.	106	1.29	AUUCCCAAACAAACCCGAACGCCU		OtherRNA	ShortStack
ccm-b0.1r1-128258	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116511:39-461	.	54	0.66	ACGAAUCGAAGUAGAAAAAUGAGU		OtherRNA	ShortStack
ccm-b0.1r1-65064	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116662:3221-4631	.	444	5.40	CUCUCUCACCCCACCG		OtherRNA	ShortStack
ccm-b0.1r1-79134	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11672:24-127	+	316	3.84	CGAGAGUAGUACUAGGAUGGGUGACCCCCUGGGAAGUCCU		OtherRNA	ShortStack
ccm-b0.1r1-79136	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11672:552-1005	+	841	10.23	GUGUGCGAUCAUACCAGC		OtherRNA	ShortStack
ccm-b0.1r1-79137	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11672:1303-1534	+	10,561	128.47	AUGCACCGGAUCCCAUCAGAACUCCGAAGUUAAGC		OtherRNA	ShortStack
ccm-b0.1r1-79138	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11672:1734-2210	+	250	3.04	AUCAGAACUCCGAAGUA		OtherRNA	ShortStack
ccm-b0.1r1-79139	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11672:2907-3112	-	94	1.14	GCGUGCUUGGGCGAGAGUAGUACUAGA		OtherRNA	ShortStack
ccm-b0.1r1-79140	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11672:4122-4312	+	1,772	21.56	CUUGUGUUGCACUCCU		OtherRNA	ShortStack
ccm-b0.1r1-79141	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11672:7560-7703	+	197	2.40	CGUGCUUGGGCGAGAGUAGUACG		OtherRNA	ShortStack
ccm-b0.1r1-103853	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11673:1-385	-	6,702	81.53	ACCCCCUGGGAAGUCCUCGUGUUGCACCCCU		OtherRNA	ShortStack
ccm-b0.1r1-58672	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116735:5861-6366	.	201	2.45	AAGUAAGUACUGAACCAGUAAGAG		OtherRNA	ShortStack
ccm-b0.1r1-92884	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116740:28827-29116	.	42	0.51	AUUUACCCACCAUUUAUCGAGAGC		OtherRNA	ShortStack
ccm-b0.1r1-24742	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116769:5244-5758	.	46	0.56	AUCUUUUUGUAAUGACUGUAAGAG		OtherRNA	ShortStack
ccm-b0.1r1-108336	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116845:4584-4841	.	51	0.62	GAAAAUGACUCUCGGU		OtherRNA	ShortStack
ccm-b0.1r1-66856	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11685:8788-9050	.	48	0.58	AUUUUUGAAACUGUUUAUCUAAGU		OtherRNA	ShortStack
ccm-b0.1r1-11507	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11686:12112-12430	.	44	0.54	AAAACGACCUAUAACUAGGGACCU		OtherRNA	ShortStack
ccm-b0.1r1-25613	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11688:2110-2330	.	48	0.58	AAAACACUCAGGGACGGACCAAGU		OtherRNA	ShortStack
ccm-b0.1r1-99996	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11697:9983-10225	.	50	0.61	UCCGGUACCCGGACUGGCGGUUCC		OtherRNA	ShortStack
ccm-b0.1r1-30631	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116972:4298-5069	.	57	0.69	UUCCGGUAGAAUUAGAACAUAA		OtherRNA	ShortStack
ccm-b0.1r1-56834	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig116992:2930-3277	.	42	0.51	CGCCGAUCGCCGGCGUUGACCGGU		OtherRNA	ShortStack
ccm-b0.1r1-114265	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11702:235-341	-	53	0.65	UUUUAUUGUUGUUGACUUGUU		OtherRNA	ShortStack
ccm-b0.1r1-87698	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117059:516-1123	.	51	0.62	UAUGCUUGGUGUCAUGC		OtherRNA	ShortStack
ccm-b0.1r1-87699	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117059:1629-1866	.	61	0.74	AAAUCCAGAACUACAAACUCGAGU		OtherRNA	ShortStack
ccm-b0.1r1-38988	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117134:9022-9304	.	49	0.60	AUUUUGCGUCAGUGUAAACCAUU		OtherRNA	ShortStack
ccm-b0.1r1-38998	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117134:24621-24981	+	120	1.46	AUGGACUGGCGUGCAAGUUGGGGU		OtherRNA	ShortStack
ccm-b0.1r1-123422	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117149:5325-5506	.	51	0.62	UUCUGUAUUUCUUAUUGU		OtherRNA	ShortStack
ccm-b0.1r1-96944	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11715:15234-15830	.	62	0.75	ACUAGGACUAAAGGAGUAAAAACU		OtherRNA	ShortStack
ccm-b0.1r1-96945	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11715:15909-16245	-	50	0.61	ACCCCAUAUGUCCCCCACCCCCUU		OtherRNA	ShortStack
ccm-b0.1r1-96947	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11715:21753-22343	.	170	2.07	CGGAUUCGAACUUGAGCGGAGG		OtherRNA	ShortStack
ccm-b0.1r1-42435	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11718:5136-5287	.	68	0.83	AGUGAGAACCGAAAAGAAAACCCU		OtherRNA	ShortStack
ccm-b0.1r1-55358	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117254:10-581	.	50	0.61	AGGUAGUGUUUGGGAACUAAGAUU		OtherRNA	ShortStack
ccm-b0.1r1-42966	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117329:25482-25827	.	63	0.77	AAGACUGCUAUUUUGCAAAAGGGC		OtherRNA	ShortStack
ccm-b0.1r1-42970	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117329:30466-30671	.	44	0.54	AGGACUCAUAAUUCUAUUCUUACU		OtherRNA	ShortStack
ccm-b0.1r1-63093	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117386:1620-1999	.	51	0.62	AUGGCAGUCCUGAACCCAAUGUUGG		OtherRNA	ShortStack
ccm-b0.1r1-63094	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117386:2099-2401	.	54	0.66	UAUGUUUUACUACUACUUUGGUC		OtherRNA	ShortStack
ccm-b0.1r1-9878	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117412:29863-30184	.	42	0.51	AUGUGAUCUGAUUUUUUUGAAAAU		OtherRNA	ShortStack
ccm-b0.1r1-45846	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117423:3537-3807	.	79	0.96	AGAACAAAGUAGGACUAAAACUU		OtherRNA	ShortStack
ccm-b0.1r1-78677	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117569:2505-2981	.	125	1.52	UUCCUGAUCAUUAAAUA		OtherRNA	ShortStack
ccm-b0.1r1-78680	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117569:5964-6392	-	47	0.57	CUGACUCACUCUUGUGUUCUGUAG		OtherRNA	ShortStack
ccm-b0.1r1-78687	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117569:22594-23335	.	56	0.68	AUGGAGAACAAUGUUGAGAGCCUU		OtherRNA	ShortStack
ccm-b0.1r1-78690	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117569:28403-28574	.	46	0.56	GCCGGUCUAACUCAGG		OtherRNA	ShortStack
ccm-b0.1r1-78700	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117569:38666-39162	.	47	0.57	AUGUAUGGUGGAGAAUGCUUGGGG		OtherRNA	ShortStack
ccm-b0.1r1-56704	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117586:5203-5356	-	13,942	169.60	GGGGAUGUAGCUCAGA		OtherRNA	ShortStack
ccm-b0.1r1-134406	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117605:5475-5764	.	54	0.66	AAUUAGACCGUGUGCUGCAUAGAA		OtherRNA	ShortStack
ccm-b0.1r1-95418	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117620:17918-18216	-	61	0.74	CAUAUGUAGGUUAAGAACUAGUA		OtherRNA	ShortStack
ccm-b0.1r1-99120	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117647:12867-13277	.	256	3.11	AAAGAUCUAUGGUGGACAGAGGGA		OtherRNA	ShortStack
ccm-b0.1r1-80167	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117650:2848-3127	-	1,171	14.25	GCCGUGUACAAUAAGCCGAUGCUCUGGAUU		OtherRNA	ShortStack
ccm-b0.1r1-80578	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117750:3-462	+	105	1.28	GGUGUGAUCAAGAGUGUGGAGA		OtherRNA	ShortStack
ccm-b0.1r1-80579	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117750:1832-2273	-	44	0.54	UUGGAUUUGGCGUGGACGCUCC		OtherRNA	ShortStack
ccm-b0.1r1-80580	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117750:4019-4565	-	75	0.91	AAUUCUGAUUCUGACU		OtherRNA	ShortStack
ccm-b0.1r1-80591	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117750:33029-33322	.	55	0.67	AUGUUAACACAAUGUGAUUUCUA		OtherRNA	ShortStack
ccm-b0.1r1-17624	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11782:9454-9655	.	70	0.85	AUUUAUGGUCUGUUUGGGAAUAAC		OtherRNA	ShortStack
ccm-b0.1r1-17625	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11782:11686-11831	+	53	0.65	AGAAGUUUGCACUGUGGUAAUGUA		OtherRNA	ShortStack
ccm-b0.1r1-136206	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117825:471-2064	-	301	3.66	AUCGGAAGCCAGAGAUCUCGC		OtherRNA	ShortStack
ccm-b0.1r1-100511	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11783:7232-7543	.	64	0.78	AUUGUAGCCGCUCAUG		OtherRNA	ShortStack
ccm-b0.1r1-113375	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117875:19498-20066	.	59	0.72	AGAGUGAUGUGUAAGUUGGUGUGC		OtherRNA	ShortStack
ccm-b0.1r1-113376	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117875:22170-22694	.	57	0.69	ACGUGUACUUGAAGGACUACUUAU		OtherRNA	ShortStack
ccm-b0.1r1-83265	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117892:55626-55885	.	47	0.57	UACGAUAUCGUAUCUAACUGGUGCU		OtherRNA	ShortStack
ccm-b0.1r1-130019	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117927:884-1648	.	154	1.87	AAUCCAAUAGUAGAUCCC		OtherRNA	ShortStack
ccm-b0.1r1-9844	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117964:10236-10620	.	49	0.60	AUUUAAGUGUUAUGUAGAGAAAUG		OtherRNA	ShortStack
ccm-b0.1r1-36997	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig117992:4606-5957	.	201	2.45	UUGAAAAUCGGACGUCC		OtherRNA	ShortStack
ccm-b0.1r1-94629	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11807:486-944	-	42	0.51	ACCGGGACGUGGCGGC		OtherRNA	ShortStack
ccm-b0.1r1-94630	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11807:1262-2157	.	175	2.13	AAUGACUAGUGAGAAGAACAAUGU		OtherRNA	ShortStack
ccm-b0.1r1-94642	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11807:22417-22620	.	147	1.79	AAUGACUGGGAGGGAACAUUCUACC		OtherRNA	ShortStack
ccm-b0.1r1-23981	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11817:4029-4459	+	56	0.68	UCUCGGUUGAACCUCCA		OtherRNA	ShortStack
ccm-b0.1r1-23982	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11817:16088-16641	.	44	0.54	AUGAGAUCAUAUCAGGCAAACGGA		OtherRNA	ShortStack
ccm-b0.1r1-23988	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11817:31241-31501	.	61	0.74	CACCCCGAUCGUCAAUUUCAGA		OtherRNA	ShortStack
ccm-b0.1r1-110971	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118384:360-1120	-	860	10.46	UUUGCCCUGUACUCAAAUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.1r1-49068	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11841:2792-3397	-	55	0.67	AUGGUCUCUGGGCUCUUUCAGCU		OtherRNA	ShortStack
ccm-b0.1r1-51890	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118458:249-791	-	2,038	24.79	UGUUCAGUAACUUGAGCCUGUAACCC		OtherRNA	ShortStack
ccm-b0.1r1-51892	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118458:9269-9925	.	107	1.30	CCUGUCGAAGACGCUCUGUACU		OtherRNA	ShortStack
ccm-b0.1r1-51896	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118458:24884-25055	.	42	0.51	AAAGACUAUCGACGGACAGCGUU		OtherRNA	ShortStack
ccm-b0.1r1-51897	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118458:26822-28191	-	2,568	31.24	UGAAAGCUCUGACACGAUCGAU		OtherRNA	ShortStack
ccm-b0.1r1-71599	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118513:7293-8236	+	54	0.66	CGCGGCGGCGUGGGUGG		OtherRNA	ShortStack
ccm-b0.1r1-117179	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118540:21-366	.	42	0.51	ACGGUCGCUGCCAGGUUUCGAUC		OtherRNA	ShortStack
ccm-b0.1r1-111226	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118595:1-943	-	679	8.26	ACUAUGAAAUCUGAUG		OtherRNA	ShortStack
ccm-b0.1r1-86013	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118596:7-324	-	106	1.29	AAUAUCGUGUUGAGAACU		OtherRNA	ShortStack
ccm-b0.1r1-74571	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118731:13-728	-	127	1.55	AAUCGGCCCUCCCCAGAAGGAC		OtherRNA	ShortStack
ccm-b0.1r1-106555	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118816:4778-6814	.	335	4.08	CUUCCGAUGUGGGAUACACUCUA		OtherRNA	ShortStack
ccm-b0.1r1-9972	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118850:705-844	+	60	0.73	AUUGAAUUACCCCUGUA		OtherRNA	ShortStack
ccm-b0.1r1-125640	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11886:5238-5811	.	180	2.19	AUUUAUUCAAACGGAGUAGGCUACU		OtherRNA	ShortStack
ccm-b0.1r1-88578	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118919:4793-4958	+	62	0.75	AUAUUGGUGACAAAGGAUAGAACA		OtherRNA	ShortStack
ccm-b0.1r1-38384	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig118987:2675-3815	+	529	6.44	GGGAAUUCGGCCGGAGCUGUU		OtherRNA	ShortStack
ccm-b0.1r1-122258	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11913:14605-15115	+	89	1.08	UGGUUCAAGAAAUUUGGGAGG		OtherRNA	ShortStack
ccm-b0.1r1-122259	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11913:16044-16310	+	78	0.95	UGUUUGUGCAGAAUGGAAC		OtherRNA	ShortStack
ccm-b0.1r1-122260	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11913:20829-20999	+	132	1.61	GAGAAGCUGUUUGAACCCC		OtherRNA	ShortStack
ccm-b0.1r1-122261	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11913:21107-21307	+	78	0.95	AGAGAAUGAGUAUGGGCCAGUGGAAUGGGAAAUUGGUGAGC		OtherRNA	ShortStack
ccm-b0.1r1-122262	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11913:22292-22589	.	216	2.63	AUUAAGACUGUCAAAGAACCAACU		OtherRNA	ShortStack
ccm-b0.1r1-122263	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11913:22991-23184	+	166	2.02	AUUGGCAGUCGUACACUGAAGAGGU		OtherRNA	ShortStack
ccm-b0.1r1-122264	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11913:23319-23870	+	245	2.98	UCGGGCGAAUCAAAGAAUCUCAAUACCCUUGG		OtherRNA	ShortStack
ccm-b0.1r1-122265	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11913:23976-24624	+	333	4.05	AGACGAACUGCGGACAACCUUCACAAACAUGGU		OtherRNA	ShortStack
ccm-b0.1r1-125746	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119141:16566-17090	-	47	0.57	UAGUGUGGCUGUGAACUUU		OtherRNA	ShortStack
ccm-b0.1r1-50715	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119154:3143-3445	.	48	0.58	AAAGAUGAAAAGGACC		OtherRNA	ShortStack
ccm-b0.1r1-72593	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11917:14530-14811	.	125	1.52	AAUAUGACUAUGUAACUUUUCGGU		OtherRNA	ShortStack
ccm-b0.1r1-72604	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11917:68657-68824	-	45	0.55	CCCGCCGGGACCACCA		OtherRNA	ShortStack
ccm-b0.1r1-30711	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119180:1461-1644	-	144	1.75	GGGUCCAUAGCUCAGUGGUAGAGCAUUUGACUG		OtherRNA	ShortStack
ccm-b0.1r1-30712	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119180:1914-2644	-	246	2.99	UGGUAGAGCAUUUGACU		OtherRNA	ShortStack
ccm-b0.1r1-111258	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119209:1131-1880	.	101	1.23	GUUUCAGGGGUGUACACUUGGUGU		OtherRNA	ShortStack
ccm-b0.1r1-120890	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119216:4116-4148	-	69	0.84	CCUUCGGGAUCGCCGCUGCC		OtherRNA	ShortStack
ccm-b0.1r1-86228	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119255:3707-4253	.	53	0.65	AAGAUGUGAUUGAUAGAUUAUUAGU		OtherRNA	ShortStack
ccm-b0.1r1-85377	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119279:932-1188	-	44	0.54	AAGGACCAAUGAUGCAGAACUCAU		OtherRNA	ShortStack
ccm-b0.1r1-137514	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11929:4039-4500	.	47	0.57	UUUCCCGAUCUAGUGCUGAAGC		OtherRNA	ShortStack
ccm-b0.1r1-39505	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119294:2884-3153	.	49	0.60	AGCGGUCCCGGGUCAUCCCAUGAC		OtherRNA	ShortStack
ccm-b0.1r1-104951	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119306:5784-6034	.	79	0.96	AGGGGCAUGCAAAGUCUGUGUACA		OtherRNA	ShortStack
ccm-b0.1r1-13664	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119315:41855-42440	.	63	0.77	GAAGAUCGUCCGCGACG		OtherRNA	ShortStack
ccm-b0.1r1-13981	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119328:3449-4901	.	323	3.93	ACCGGUAGACUGGAAC		OtherRNA	ShortStack
ccm-b0.1r1-13983	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119328:5754-6292	.	53	0.65	AGCUUUUGACAUGUUUGACUCACU		OtherRNA	ShortStack
ccm-b0.1r1-13999	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119328:35001-35238	+	83	1.01	AUAAUGAUGAAAUAGCUAAUACUGAGC		OtherRNA	ShortStack
ccm-b0.1r1-130173	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119344:14362-15345	+	47	0.57	UCCCCAGGGCUGUGCUC		OtherRNA	ShortStack
ccm-b0.1r1-13706	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119380:2303-2338	-	286	3.48	GGGGAUGUGGCUCAAA		OtherRNA	ShortStack
ccm-b0.1r1-61614	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig11940:5674-6858	-	74	0.90	UGAGAAAGGGGAGCCC		OtherRNA	ShortStack
ccm-b0.1r1-27598	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119541:6010-6923	.	339	4.12	UCCGACUUUGUGAAAUA		OtherRNA	ShortStack
ccm-b0.1r1-112197	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119646:35090-35458	.	60	0.73	CCCGAACCGAUAAAACCUGAAUC		OtherRNA	ShortStack
ccm-b0.1r1-133024	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119688:4286-4368	+	241	2.93	GUCGUUGUAGUAUAGUGGUAAGUAUUCCCGCCU		OtherRNA	ShortStack
ccm-b0.1r1-133029	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119688:21990-22762	-	60	0.73	GACUCGGCGGCUGAGCUCGUUGCUGC		OtherRNA	ShortStack
ccm-b0.1r1-61648	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119701:2128-2273	.	47	0.57	ACCGGAGCUCUGGGGAAG		OtherRNA	ShortStack
ccm-b0.1r1-96060	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119780:760-1488	.	58	0.71	CCACAAAGAUCGAUCCCGACUU		OtherRNA	ShortStack
ccm-b0.1r1-102863	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119832:597-1221	+	110	1.34	UCUGAAGGUCACGUGC		OtherRNA	ShortStack
ccm-b0.1r1-102864	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119832:1375-2054	+	85	1.03	GCUUGAGAUUGCGACGAACCGUGAUA		OtherRNA	ShortStack
ccm-b0.1r1-54342	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119949:26382-26460	+	127,322	1,548.81	GGGGAUGUAGCUCAGA		OtherRNA	ShortStack
ccm-b0.1r1-54345	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119949:37127-37792	+	133	1.62	AGAAGAUCAAGAAGUUGAGAACCAAGG		OtherRNA	ShortStack
ccm-b0.1r1-54351	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119949:51468-52247	.	57	0.69	AUGGCGUGACACCGGUAACAUGGC		OtherRNA	ShortStack
ccm-b0.1r1-54353	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig119949:56043-56330	.	79	0.96	ACGCCAGGAUAGAACG		OtherRNA	ShortStack
ccm-b0.1r1-33067	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120061:6642-7025	.	48	0.58	AUGAUGAGAUGUGUAGAAUAGAUU		OtherRNA	ShortStack
ccm-b0.1r1-13592	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120076:33-940	.	50	0.61	AUUUGAAUUGAAUAAUCGUGAAAA		OtherRNA	ShortStack
ccm-b0.1r1-100051	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120122:3168-3243	+	59	0.72	UGUGAUCUUUGUGUUUGUGACUCU		OtherRNA	ShortStack
ccm-b0.1r1-135702	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120144:3427-3745	.	77	0.94	AGUAAGAUCGGCUAGCUUCUAUAGC		OtherRNA	ShortStack
ccm-b0.1r1-135703	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120144:4680-5329	.	90	1.10	CUCGGUGGGACCUCCU		OtherRNA	ShortStack
ccm-b0.1r1-135707	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120144:18025-18075	-	82	1.00	UAAUAUUGUAGCCGCUCA		OtherRNA	ShortStack
ccm-b0.1r1-135710	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120144:28851-29481	+	29,760	362.02	UACUGUGAAGAUAGAUCGACUAUCUGAGGCU		OtherRNA	ShortStack
ccm-b0.1r1-135711	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120144:29598-29951	+	15,057	183.16	UACUGUGAUGUCCGAUCGACUAUCUGAGGCUU		OtherRNA	ShortStack
ccm-b0.1r1-135717	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120144:48545-48897	.	129	1.57	GCACGUGUCGUUGGCG		OtherRNA	ShortStack
ccm-b0.1r1-135037	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12016:1753-1932	+	5,264	64.03	AAAUCAUGUGGGCUCU		OtherRNA	ShortStack
ccm-b0.1r1-126840	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120160:2791-2971	-	49	0.60	CUUUCUGAUAUCUUUUUACUGUAG		OtherRNA	ShortStack
ccm-b0.1r1-108304	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12019:19644-19887	-	87	1.06	UGACGAUACUGUAGGA		OtherRNA	ShortStack
ccm-b0.1r1-108307	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12019:27496-27820	.	68	0.83	UUUGUAGUAAGAACUACCGGGUACC		OtherRNA	ShortStack
ccm-b0.1r1-74471	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120206:2948-3536	-	52	0.63	AUACUGUAUGUCCACAUUCAUUUG		OtherRNA	ShortStack
ccm-b0.1r1-74472	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120206:3855-4260	.	63	0.77	GCGGGAGUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.1r1-73579	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12026:11236-11566	+	2,098	25.52	UUAUCACAUCUAUCUGAGCUA		OtherRNA	ShortStack
ccm-b0.1r1-96064	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120345:158-1114	.	137	1.67	ACAGGUUCGAAACUCAACGCCACC		OtherRNA	ShortStack
ccm-b0.1r1-96065	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120345:4830-5512	.	59	0.72	AACCUCUUCCGAUUGUUCCAACUC		OtherRNA	ShortStack
ccm-b0.1r1-118407	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12037:16661-19180	.	240	2.92	CGUCUGCCUGGGUGCC		OtherRNA	ShortStack
ccm-b0.1r1-118413	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12037:29592-30042	.	64	0.78	AAGUGUAGUAUCUGUUCUUAUCAGUUC		OtherRNA	ShortStack
ccm-b0.1r1-41111	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120451:150-423	.	129	1.57	AUAAAUCUGGUUGAAUUCUUCAUC		OtherRNA	ShortStack
ccm-b0.1r1-120168	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120603:5000-5246	-	3,444	41.90	UUGGGCUUGCACUACUUCCUUGGCCCGGCACACCCC		OtherRNA	ShortStack
ccm-b0.1r1-99929	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120661:37859-38327	-	94	1.14	AUAUUCACUCAUAAGGUCUGGCCU		OtherRNA	ShortStack
ccm-b0.1r1-113714	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120671:1108-1212	+	119	1.45	CGAUGGUAGGAUAGUA		OtherRNA	ShortStack
ccm-b0.1r1-89086	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1207:1-153	.	43	0.52	GAACUAGUAAGAACUUCUCGGU		OtherRNA	ShortStack
ccm-b0.1r1-97610	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120716:1155-1326	.	45	0.55	AAAAGAGCCAAUAUCUUCACUGGG		OtherRNA	ShortStack
ccm-b0.1r1-109779	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120725:3788-4240	.	184	2.24	GAUUUGGAUGAGAUUGAAUUCUCC		OtherRNA	ShortStack
ccm-b0.1r1-13548	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12074:3911-4455	.	42	0.51	CGAGUCUUUGAACGCG		OtherRNA	ShortStack
ccm-b0.1r1-40464	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12088:1691-2072	.	95	1.16	CUCCUUAAACUUUAUGAGU		OtherRNA	ShortStack
ccm-b0.1r1-113400	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120890:859-993	.	42	0.51	CAGUAGAAAACCGAGGGUACCCCG		OtherRNA	ShortStack
ccm-b0.1r1-133341	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig120980:14951-15226	-	64	0.78	UUGGGAUUGUAAGUAGGCACC		OtherRNA	ShortStack
ccm-b0.1r1-57592	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121008:53422-53818	+	1,397	16.99	UGGAUGUCUGAGGCUU		OtherRNA	ShortStack
ccm-b0.1r1-57593	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121008:53899-54252	+	368	4.48	GGCAGUGAUGAUUGAAGUAUUAUACCAUCAAACUUUGAAAGCA		OtherRNA	ShortStack
ccm-b0.1r1-98457	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121032:1915-2422	.	50	0.61	AACCGGAAUCAGGAUUUUCUUACG		OtherRNA	ShortStack
ccm-b0.1r1-13973	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12104:999-1763	.	129	1.57	AGCACACAGAACAUAGACGUACUG		OtherRNA	ShortStack
ccm-b0.1r1-64500	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12109:55486-55828	-	47	0.57	CUACUAAGCAAUGUUAUGUUUGUUGUUCUCUGU		OtherRNA	ShortStack
ccm-b0.1r1-64501	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12109:55913-56426	-	204	2.48	ACGGGACUGAAAAUGGUGUU		OtherRNA	ShortStack
ccm-b0.1r1-64502	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12109:59524-59766	-	113	1.38	UGCCGAGAAUCGGACCUACAAACUCGGGCUGAAC		OtherRNA	ShortStack
ccm-b0.1r1-130541	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121167:882-1058	-	42	0.51	ACUGGAAAAAACUGGAAGGAACC		OtherRNA	ShortStack
ccm-b0.1r1-130547	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121167:6438-6770	.	109	1.33	AUUGUACUCUGAUCUGGUCUGAUC		OtherRNA	ShortStack
ccm-b0.1r1-49494	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121181:486-1427	.	195	2.37	UUGAGAGCUCUUUCAAGA		OtherRNA	ShortStack
ccm-b0.1r1-25346	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121187:23-1019	+	74	0.90	GAAAGUGAAUCUGAGGUU		OtherRNA	ShortStack
ccm-b0.1r1-25349	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121187:13777-14175	.	92	1.12	AUGAAGCUCUAACCUCAAACGAGU		OtherRNA	ShortStack
ccm-b0.1r1-25357	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121187:32427-32924	.	45	0.55	GGCCGACACUGACACC		OtherRNA	ShortStack
ccm-b0.1r1-25358	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121187:33852-34330	.	61	0.74	ACCAGACCCAGAACCCCAGAAGCC		OtherRNA	ShortStack
ccm-b0.1r1-25360	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121187:35659-36389	.	48	0.58	UUGGUCUUUAGAUAAUCCGUUUGU		OtherRNA	ShortStack
ccm-b0.1r1-48591	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12119:291-812	+	48	0.58	UGUUACUUUGGAGAAA		OtherRNA	ShortStack
ccm-b0.1r1-48604	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12119:44317-44512	+	2,472	30.07	UCGGACCAGGCUUCAUCCUUU		OtherRNA	ShortStack
ccm-b0.1r1-39811	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121274:12252-13028	.	97	1.18	GACGUGGCUGAAGGGAACGAC		OtherRNA	ShortStack
ccm-b0.1r1-97767	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121295:8083-8361	.	42	0.51	UGCCGUGAUCGUGGUCG		OtherRNA	ShortStack
ccm-b0.1r1-97772	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121295:14220-14524	.	50	0.61	AAUCAAGAGCAUGUAUGUGGGACA		OtherRNA	ShortStack
ccm-b0.1r1-108365	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12132:418-885	+	45	0.55	AGUGAUUAAGAUCUAU		OtherRNA	ShortStack
ccm-b0.1r1-107351	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121338:3315-3331	+	197	2.40	GCGUCUGCAGUCCAAC		OtherRNA	ShortStack
ccm-b0.1r1-99285	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12150:12326-12343	-	63	0.77	CUUAUGGACCCGAACU		OtherRNA	ShortStack
ccm-b0.1r1-132663	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121529:2696-3130	-	56	0.68	AAAAUGGAAUUGGAGUAAACUGUG		OtherRNA	ShortStack
ccm-b0.1r1-87176	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1216:1-642	.	4,597	55.92	UCUAGCGACUAAAUGAGUUGAACU		OtherRNA	ShortStack
ccm-b0.1r1-87177	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1216:723-905	.	46	0.56	GAAAUGAAGCGGAACUUUCCU		OtherRNA	ShortStack
ccm-b0.1r1-26512	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12165:24657-24909	+	42	0.51	AUUUUGUUAGGGGCGAUGCUACGU		OtherRNA	ShortStack
ccm-b0.1r1-68210	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12166:16043-16614	.	51	0.62	AGUGCGCCGAUCGUGUAGUAGUCU		OtherRNA	ShortStack
ccm-b0.1r1-68213	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12166:21600-21862	+	44	0.54	AGACUCCGGGACUUUA		OtherRNA	ShortStack
ccm-b0.1r1-66190	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121680:2987-3639	+	43	0.52	UCAAUGGGGAACUCCACU		OtherRNA	ShortStack
ccm-b0.1r1-60896	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121771:36-259	.	172	2.09	AGUUCAACUGGUCGAACUGGUGGU		OtherRNA	ShortStack
ccm-b0.1r1-60897	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121771:786-1010	.	43	0.52	AAUGACUAGUGAAAAGAAUAAUGU		OtherRNA	ShortStack
ccm-b0.1r1-10078	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12179:10679-10773	-	118	1.44	GACAGUUUGGCCGAGUGG		OtherRNA	ShortStack
ccm-b0.1r1-10081	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12179:20417-20592	-	149	1.81	GACAGUUUGGCCGAGUG		OtherRNA	ShortStack
ccm-b0.1r1-95912	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12188:686-951	.	42	0.51	GCCAAAUCUUUGACCGGACAAUCU		OtherRNA	ShortStack
ccm-b0.1r1-84256	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121894:39124-39680	-	122	1.48	GACACGGUUCGUAGAAGAAUG		OtherRNA	ShortStack
ccm-b0.1r1-84257	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121894:40271-40702	-	149	1.81	UUUGGAUUGUACGACUCUAUU		OtherRNA	ShortStack
ccm-b0.1r1-84258	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121894:41540-41959	-	143	1.74	UUUCAGUCGAACUGUU		OtherRNA	ShortStack
ccm-b0.1r1-84263	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121894:55160-55489	-	50	0.61	UAACUAAUCAAACCGGGCUUUGAUU		OtherRNA	ShortStack
ccm-b0.1r1-50099	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12192:14110-14650	+	358	4.36	AUGGCUCAGAUUGAAC		OtherRNA	ShortStack
ccm-b0.1r1-50100	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12192:20886-21019	.	42	0.51	AAUCCGCACUGUUAAAAUUUUAUC		OtherRNA	ShortStack
ccm-b0.1r1-50101	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12192:22113-24109	+	1,115	13.56	CAAUAUAAGCGUCGUG		OtherRNA	ShortStack
ccm-b0.1r1-50102	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12192:28297-28739	+	79	0.96	ACCUAAUCUGAUUAAUUCUGAUCU		OtherRNA	ShortStack
ccm-b0.1r1-50104	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12192:36055-36473	.	47	0.57	GGGGCGAGACGUGAAA		OtherRNA	ShortStack
ccm-b0.1r1-50109	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12192:73208-73567	.	62	0.75	AGGAAAUGAUGAGCAUAUUUCUGAUCCU		OtherRNA	ShortStack
ccm-b0.1r1-50119	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12192:117290-117915	.	50	0.61	CCCCACGGGCGGCGCCA		OtherRNA	ShortStack
ccm-b0.1r1-50120	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12192:119028-119727	.	61	0.74	UUGUUGCUUUGAUUGA		OtherRNA	ShortStack
ccm-b0.1r1-50121	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12192:120320-120544	-	91	1.11	AAGAUCUGAUUAAUAACUGAAUAAC		OtherRNA	ShortStack
ccm-b0.1r1-101741	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121926:9404-10189	.	107	1.30	AGGGAUAAGAUUGAGAAAUUGGAU		OtherRNA	ShortStack
ccm-b0.1r1-124668	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121929:3649-3892	.	87	1.06	CAUCGGACAAAGGGGACUCUUGACUACCUUCAUA		OtherRNA	ShortStack
ccm-b0.1r1-29274	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig121984:4497-4625	.	70	0.85	AAUCAGUUCUGGACAAAAGAGAGU		OtherRNA	ShortStack
ccm-b0.1r1-106733	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122027:1-165	.	89	1.08	UUAUUCGAACGACUAAAGAUAUGCU		OtherRNA	ShortStack
ccm-b0.1r1-106736	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122027:7962-8440	+	47	0.57	CCAAAUAUGGUGCCAAGAACUU		OtherRNA	ShortStack
ccm-b0.1r1-106737	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122027:8522-9161	+	91	1.11	GCUAAUGUCGACAACGAAAC		OtherRNA	ShortStack
ccm-b0.1r1-106738	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122027:11684-12023	-	78	0.95	CCGGACCGACCCUAAAAUAUAUAG		OtherRNA	ShortStack
ccm-b0.1r1-23451	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122088:1710-1812	-	171	2.08	CAUCAGAACUCCGAAGUA		OtherRNA	ShortStack
ccm-b0.1r1-24300	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122111:8888-9268	+	329	4.00	UGCGGGAGGAUCAUUA		OtherRNA	ShortStack
ccm-b0.1r1-80487	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122113:1851-2025	.	68	0.83	AUCUCGUAAGUAAGACGAACGUCU		OtherRNA	ShortStack
ccm-b0.1r1-59376	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122151:18-438	-	847	10.30	CUGGGAAGUCCUCGUGUUGCACCCCU		OtherRNA	ShortStack
ccm-b0.1r1-71362	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122162:16431-16679	.	51	0.62	CUCAACAAGAGCACCA		OtherRNA	ShortStack
ccm-b0.1r1-75698	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122192:10772-10941	-	117	1.42	AAAGGAGUUUGGGUCAUG		OtherRNA	ShortStack
ccm-b0.1r1-75699	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122192:11020-11205	-	3,458	42.07	CAUAGAAUAUGAGCACA		OtherRNA	ShortStack
ccm-b0.1r1-75701	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122192:13414-13953	.	61	0.74	AAUAAUGACUCUCGACAA		OtherRNA	ShortStack
ccm-b0.1r1-32075	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122195:1060-1666	.	498	6.06	ACAGAGAUUCGUUGAACAUAG		OtherRNA	ShortStack
ccm-b0.1r1-58181	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122240:4138-4156	+	44	0.54	CUUUGUUGUUUUGAUUCCU		OtherRNA	ShortStack
ccm-b0.1r1-134715	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12227:7706-8686	-	8,781	106.82	UUUGUUCUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.1r1-134716	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12227:8860-9288	-	2,767	33.66	CCAUCUGCUGAGAAUUCAUCUCAAAUCUGACG		OtherRNA	ShortStack
ccm-b0.1r1-134727	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12227:35569-36100	.	77	0.94	CCGGUUGGACCCUCCG		OtherRNA	ShortStack
ccm-b0.1r1-134739	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12227:63782-64069	+	154	1.87	AUGUAAACUUUAGGACUGUACUAGC		OtherRNA	ShortStack
ccm-b0.1r1-103065	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122277:9761-10374	-	484	5.89	UGAUUUCGGUGAGGAACAGGAA		OtherRNA	ShortStack
ccm-b0.1r1-103066	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122277:10472-11364	-	1,924	23.41	CCGGCGGAUCUGUGACGGCCU		OtherRNA	ShortStack
ccm-b0.1r1-67197	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122282:13141-13384	-	43	0.52	UUGAUCUCUGUGACUAGAAUAACU		OtherRNA	ShortStack
ccm-b0.1r1-67206	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122282:52033-52889	.	92	1.12	AUGACUUGAGAGGUGA		OtherRNA	ShortStack
ccm-b0.1r1-75117	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122288:265-757	.	172	2.09	AUCCCACAUCUGACACCA		OtherRNA	ShortStack
ccm-b0.1r1-76858	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122312:9531-9580	-	555	6.75	GCUGGAGUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.1r1-98871	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122342:29-570	+	63	0.77	CUCAACAGAUCGGCGGU		OtherRNA	ShortStack
ccm-b0.1r1-45005	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122363:2585-3240	.	122	1.48	AGAAAUAGCUAGAACU		OtherRNA	ShortStack
ccm-b0.1r1-101072	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122377:2295-2455	.	57	0.69	GUUCGUGUCAGCUGUUGUGAAUGGC		OtherRNA	ShortStack
ccm-b0.1r1-100457	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122423:1432-1530	+	47	0.57	UCCUGAGGUCGAGAGU		OtherRNA	ShortStack
ccm-b0.1r1-116905	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122506:33360-34111	.	272	3.31	AUAAACGAAGAUCCAUAGAACAGC		OtherRNA	ShortStack
ccm-b0.1r1-25090	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122557:1340-1793	.	63	0.77	AUGUGGGCAUGUGGUCUAAUUACU		OtherRNA	ShortStack
ccm-b0.1r1-25091	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122557:2018-2523	+	63	0.77	CAAGCCGCCGCCCUUC		OtherRNA	ShortStack
ccm-b0.1r1-25092	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122557:2793-3633	+	117	1.42	ACUUUGUUGGGCAUCUGGCCAGGC		OtherRNA	ShortStack
ccm-b0.1r1-25093	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122557:3915-4165	.	43	0.52	ACCGUGUCUUGGACUCUAAACGCC		OtherRNA	ShortStack
ccm-b0.1r1-72735	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12265:49873-50133	.	53	0.65	ACGGUGCAAUGUAAAAUCUCAUAC		OtherRNA	ShortStack
ccm-b0.1r1-72742	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12265:75131-75340	.	42	0.51	AUUCUGAUCUGAUUAAAUCUAUUC		OtherRNA	ShortStack
ccm-b0.1r1-68986	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122657:335-648	.	51	0.62	AAGUGAUGCUGGACAUC		OtherRNA	ShortStack
ccm-b0.1r1-72304	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122672:13786-15182	+	305	3.71	UUUGUGUUGUGAUAGC		OtherRNA	ShortStack
ccm-b0.1r1-23464	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12279:30662-31469	.	77	0.94	ACAUGUGCCGAUGUUUAUUCUGU		OtherRNA	ShortStack
ccm-b0.1r1-23465	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12279:31549-32296	.	46	0.56	ACAUUCGGACGACAGAUAAGCGUC		OtherRNA	ShortStack
ccm-b0.1r1-134824	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1228:7034-8253	+	5,297	64.44	GGCUAGGUAACAUAAUGGAAAUGUAUCGGACU		OtherRNA	ShortStack
ccm-b0.1r1-61707	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12282:21560-22231	.	56	0.68	CGAAGCACGGAAUUAACAC		OtherRNA	ShortStack
ccm-b0.1r1-31241	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122831:2382-3051	.	86	1.05	GGCUGUCGGUGGACUG		OtherRNA	ShortStack
ccm-b0.1r1-77981	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122932:490-925	.	60	0.73	AAGGAUCCUCGGAGUAUAUUUUGA		OtherRNA	ShortStack
ccm-b0.1r1-98589	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122974:9994-10066	-	456	5.55	CCCGGUAGGACCUCCG		OtherRNA	ShortStack
ccm-b0.1r1-44595	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig122993:31456-31661	+	47	0.57	GCCAUGGAAGAAAAGCAGAUA		OtherRNA	ShortStack
ccm-b0.1r1-134112	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123030:3430-3578	+	42	0.51	CCCAACACGAAUCGGACUUGCUGGCCU		OtherRNA	ShortStack
ccm-b0.1r1-89922	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123043:2-722	+	51	0.62	UAGACACAGAUUUCGACGGAUGUAUGAAGCUG		OtherRNA	ShortStack
ccm-b0.1r1-27004	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123162:3587-3720	-	111	1.35	UCUUCUAAUUGUCGUAGUUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.1r1-27005	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123162:5546-6109	-	372	4.53	AUUCCCUCUGGAAACACAGAUCUGAGCCUC		OtherRNA	ShortStack
ccm-b0.1r1-38592	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123188:3-448	.	164	2.00	UCUUUCUCGGAUCUGUCGGAUCUG		OtherRNA	ShortStack
ccm-b0.1r1-116627	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123286:9591-10054	-	116	1.41	AUGAGAAUCUGCCGUCGC		OtherRNA	ShortStack
ccm-b0.1r1-20422	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123337:41783-41837	.	42	0.51	AUUAUCCUGACGGUCUAUCGAUCU		OtherRNA	ShortStack
ccm-b0.1r1-9835	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123550:5617-5779	+	136	1.65	CCGGAGGACAAUGCUAAGGCGA		OtherRNA	ShortStack
ccm-b0.1r1-123512	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123641:3812-4478	-	61	0.74	AUGCGUGUUGACUGUGGCACCUGAUCUCGUC		OtherRNA	ShortStack
ccm-b0.1r1-98432	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123662:10653-10841	-	234	2.85	UAUUUAAAUGACUGAUUGAGCUAGC		OtherRNA	ShortStack
ccm-b0.1r1-98434	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123662:14543-15019	-	42	0.51	UGUACGUGCAAUGAACUCUGUUGUUUGUU		OtherRNA	ShortStack
ccm-b0.1r1-91028	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123673:5-572	-	314	3.82	UGAGAUGAACCGGGACCGCGGGGUU		OtherRNA	ShortStack
ccm-b0.1r1-44187	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123716:8885-10397	-	718	8.73	CUGGAGCUCGGACGCA		OtherRNA	ShortStack
ccm-b0.1r1-44197	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123716:35692-35860	-	59	0.72	CCUAUUUGAGGAGCCA		OtherRNA	ShortStack
ccm-b0.1r1-87262	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123726:4383-4971	.	72	0.88	AGGUGUUGUCUGUGGAUGUCUGUA		OtherRNA	ShortStack
ccm-b0.1r1-137055	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123851:22786-23118	.	43	0.52	UGCAACUUCUGAAUAGG		OtherRNA	ShortStack
ccm-b0.1r1-23233	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123969:302-1533	-	160	1.95	GCUGACGUGUACUUGAAGAACUACU		OtherRNA	ShortStack
ccm-b0.1r1-79283	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig123971:896-1045	+	11,469	139.52	AAAGCUCGUAGUUGGACUUUGAGAUGGGUUUGCCGGUCCGCCU		OtherRNA	ShortStack
ccm-b0.1r1-95974	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124027:35809-36300	+	55	0.67	UCCAGCGGCUGGAAGAGU		OtherRNA	ShortStack
ccm-b0.1r1-39190	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124111:1670-1962	-	47	0.57	AAACUUGAGACUGUGUUGUACUCA		OtherRNA	ShortStack
ccm-b0.1r1-51378	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12422:2935-4505	-	320	3.89	GCGUCUGUAGUCCGAC		OtherRNA	ShortStack
ccm-b0.1r1-51380	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12422:9629-9819	.	99	1.20	UUGUGUAGAGCGGUCCU		OtherRNA	ShortStack
ccm-b0.1r1-51387	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12422:22360-23211	.	505	6.14	AUCUCUGUUCUCUGUUCUCUCU		OtherRNA	ShortStack
ccm-b0.1r1-56826	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124243:1716-2341	.	44	0.54	AAUGGAUAAAACGUAGAAGAUAGU		OtherRNA	ShortStack
ccm-b0.1r1-105416	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124327:32214-32364	.	72	0.88	AAUCGAUUGUUAAUCUCUAAUAAU		OtherRNA	ShortStack
ccm-b0.1r1-12023	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124355:3178-3355	.	69	0.84	UUUCCAAUGUAGGACUUUUGGUU		OtherRNA	ShortStack
ccm-b0.1r1-131210	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124361:1798-2093	.	105	1.28	CACCCGUUCCGGGCUUAGUGUACGUACAUGGU		OtherRNA	ShortStack
ccm-b0.1r1-12789	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124374:6857-7104	.	52	0.63	ACGUAGACCUGACAAUC		OtherRNA	ShortStack
ccm-b0.1r1-102572	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124405:4168-4901	.	199	2.42	ACCAGGAUUAUCAGCUCUGAAUCU		OtherRNA	ShortStack
ccm-b0.1r1-63544	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124435:371-1054	.	60	0.73	GAACAAUACUGGGCUCA		OtherRNA	ShortStack
ccm-b0.1r1-111825	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124450:8207-8390	-	53	0.65	CGUGAUCAUCGGCGGUGGCGUUGCU		OtherRNA	ShortStack
ccm-b0.1r1-43058	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124572:417-807	.	45	0.55	ACUGUCUGGCGAUUUGGAAUUUUC		OtherRNA	ShortStack
ccm-b0.1r1-74453	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12464:7637-7980	+	139	1.69	GGAUGUCGGACGAGGAGCAUC		OtherRNA	ShortStack
ccm-b0.1r1-74454	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12464:9414-9626	+	83	1.01	UAAAAUAACCAUCAUCCAUGCAG		OtherRNA	ShortStack
ccm-b0.1r1-74455	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12464:10076-10567	+	82	1.00	AUGGAUUUGCCGAUGGGA		OtherRNA	ShortStack
ccm-b0.1r1-108163	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124675:999-1566	.	49	0.60	AGAGGUCACGGGUCGAAACUCAGU		OtherRNA	ShortStack
ccm-b0.1r1-108164	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124675:9693-10286	.	118	1.44	AUAAGACACUUGUGCUGAACUACA		OtherRNA	ShortStack
ccm-b0.1r1-123148	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1247:129-410	.	441	5.37	CGGUCUAGCUCUUGAAUUCGACU		OtherRNA	ShortStack
ccm-b0.1r1-90473	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124746:32904-33432	.	127	1.55	UCCCACAUCUGACACCA		OtherRNA	ShortStack
ccm-b0.1r1-90474	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124746:46264-46487	-	1,211	14.73	UGAAGGCAGCCAGAUGAGCAU		OtherRNA	ShortStack
ccm-b0.1r1-90475	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124746:46595-46784	-	46	0.56	ACACGGAGUUGAUGGAACUAAAAU		OtherRNA	ShortStack
ccm-b0.1r1-84965	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1248:1-142	-	14,290	173.83	UGUGCUCCUGGUCUUAAUUGGUCGGGUCAUG		OtherRNA	ShortStack
ccm-b0.1r1-84966	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1248:495-641	.	819	9.96	CGCUAGAGAAUUCGUUGAACUA		OtherRNA	ShortStack
ccm-b0.1r1-40948	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig124865:10426-10910	+	92	1.12	GUUGUGAAUGGCUGUUUAGUUUAGU		OtherRNA	ShortStack
ccm-b0.1r1-35746	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125014:12190-12414	.	44	0.54	ACGGAAAAUAAAGCGAUAUGAGGC		OtherRNA	ShortStack
ccm-b0.1r1-85009	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125162:12340-12640	-	69	0.84	GUGUCUGUGUAUAUCUGUGUUAGC		OtherRNA	ShortStack
ccm-b0.1r1-43261	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125198:526-1120	.	85	1.03	GGGAUGGCGAGAUCUGAGCUCUUC		OtherRNA	ShortStack
ccm-b0.1r1-52340	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125199:2454-3156	.	44	0.54	AUCCUGUGACCUCUUGAUUAACGA		OtherRNA	ShortStack
ccm-b0.1r1-52341	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125199:3791-4304	.	189	2.30	UCUUUGUAGGACCUCUGGCGCUACC		OtherRNA	ShortStack
ccm-b0.1r1-49507	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125200:121-289	.	61	0.74	AACCGUUCAUCUAAGCACUUUGAC		OtherRNA	ShortStack
ccm-b0.1r1-116008	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125255:3884-3939	-	247	3.01	AUCAUCGAUUGACUGAGUGAAAGGCUGGUCUUU		OtherRNA	ShortStack
ccm-b0.1r1-61389	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12538:31-203	-	59	0.72	AUUUGGCUGUUGGAAAUUCCUGCC		OtherRNA	ShortStack
ccm-b0.1r1-111939	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125410:1470-2078	-	72	0.88	UAGACAACGUAGAUCU		OtherRNA	ShortStack
ccm-b0.1r1-121131	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125481:790-1641	+	68	0.83	AUAUCUAGGUAGAACU		OtherRNA	ShortStack
ccm-b0.1r1-76505	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12551:1399-1548	+	52	0.63	CACACGGAAUCGAGAGU		OtherRNA	ShortStack
ccm-b0.1r1-34599	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125510:20900-21595	.	52	0.63	GGCAGGACGUGUCGGC		OtherRNA	ShortStack
ccm-b0.1r1-34600	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125510:26174-26498	.	43	0.52	AUGAGUAUAAUGACAAUGUGAUGU		OtherRNA	ShortStack
ccm-b0.1r1-34603	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125510:34929-35887	.	177	2.15	GCGGCCGUCGUCCCUCU		OtherRNA	ShortStack
ccm-b0.1r1-114703	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125526:33616-33853	.	73	0.89	AAAUGGUAGAACUCUCACAUUGCC		OtherRNA	ShortStack
ccm-b0.1r1-33527	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125528:4559-5032	+	73	0.89	AAGCAGGCAAGAGAAAAGCCUGCUGGAC		OtherRNA	ShortStack
ccm-b0.1r1-91788	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125544:8148-8373	.	779	9.48	UGAAUUGUCUCUGAAGCUGAC		OtherRNA	ShortStack
ccm-b0.1r1-42448	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125576:4503-4663	+	847	10.30	CAUGCCUGUCGGGACC		OtherRNA	ShortStack
ccm-b0.1r1-126429	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125641:8480-8787	+	53	0.65	GUAGUUUGACUGGGGC		OtherRNA	ShortStack
ccm-b0.1r1-126430	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125641:9842-10437	+	75	0.91	UAUAGAUGUGUAGUUU		OtherRNA	ShortStack
ccm-b0.1r1-126432	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125641:16194-16544	.	77	0.94	AAUUUACACGGACACAAGUAUUGG		OtherRNA	ShortStack
ccm-b0.1r1-28619	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125681:1844-1960	-	6,757	82.20	AAAAAUGACUCUCGGU		OtherRNA	ShortStack
ccm-b0.1r1-95840	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125715:216-739	.	65	0.79	UUAGAGAGGGUAGGACUCAUC		OtherRNA	ShortStack
ccm-b0.1r1-104187	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125723:4904-5033	.	44	0.54	AGUCUUUAUCACAAAACUGAGGGU		OtherRNA	ShortStack
ccm-b0.1r1-82174	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125746:6856-7517	-	48	0.58	AGAUAUUAUUGAGAUUAUGAAU		OtherRNA	ShortStack
ccm-b0.1r1-82175	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125746:7609-8519	-	179	2.18	AAGAGAUAGAUCUGGCUGGGAGG		OtherRNA	ShortStack
ccm-b0.1r1-10699	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125824:3001-3701	.	82	1.00	ACACCAUAUUGAUCACUUGAACUA		OtherRNA	ShortStack
ccm-b0.1r1-98524	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig125866:1027-1172	-	65	0.79	GAUGUCAGGGACAUAAGUUUGCAUUAUUAUUGGGUGAGCCUC		OtherRNA	ShortStack
ccm-b0.1r1-121715	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126041:58090-58388	.	54	0.66	AUUUUGUUGGAAUUGGUA		OtherRNA	ShortStack
ccm-b0.1r1-108315	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126149:3386-4004	-	27,063	329.21	UACUGUGAAGACAGAUCGACUAUCUGAGGCU		OtherRNA	ShortStack
ccm-b0.1r1-58629	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126159:21728-22772	.	225	2.74	UGGUAUGUAGCUCAGA		OtherRNA	ShortStack
ccm-b0.1r1-58632	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126159:29981-30268	.	89	1.08	AGCGGCAUCCUCUAGAACCACCAC		OtherRNA	ShortStack
ccm-b0.1r1-15018	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126182:505-691	-	19,713	239.80	CUCGUGUUGCACCCCC		OtherRNA	ShortStack
ccm-b0.1r1-126749	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126190:26542-26761	.	46	0.56	AAAGGAUAAAAUUUGUUAGACUAU		OtherRNA	ShortStack
ccm-b0.1r1-37743	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1262:2135-2428	-	150,414	1,829.71	UUGUUGCUUUGAUUCCC		OtherRNA	ShortStack
ccm-b0.1r1-30931	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126258:10389-10849	.	93	1.13	AGGGGUGCUGACUGGACUUUGACC		OtherRNA	ShortStack
ccm-b0.1r1-30933	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126258:13779-14278	.	44	0.54	ACGCCCGGAGACCUGGACGCCCUG		OtherRNA	ShortStack
ccm-b0.1r1-89989	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12629:7891-8360	+	52	0.63	UCUCGGUGGAGCCUCCG		OtherRNA	ShortStack
ccm-b0.1r1-48234	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126331:1-384	+	148	1.80	GUGAAGGCGGCGGACAUGGU		OtherRNA	ShortStack
ccm-b0.1r1-16256	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126334:78-531	.	106	1.29	UGACGGAAUUGGAAUUGAAAAUC		OtherRNA	ShortStack
ccm-b0.1r1-38632	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126337:8697-9131	+	116	1.41	UGUGCUGAUGUGACUGAGCGUGUUCU		OtherRNA	ShortStack
ccm-b0.1r1-31023	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12648:12016-12500	.	70	0.85	CCUGCAUGGGCCACCA		OtherRNA	ShortStack
ccm-b0.1r1-31024	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12648:13590-14401	+	2,580	31.38	UGGAUGUCUGAGGCUC		OtherRNA	ShortStack
ccm-b0.1r1-31028	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12648:23544-23821	.	42	0.51	AAUGGGCCUGUUUGAGAUUAGCGU		OtherRNA	ShortStack
ccm-b0.1r1-31041	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12648:66240-66372	+	66	0.80	UAGCGAGUGUCGAAGUA		OtherRNA	ShortStack
ccm-b0.1r1-134374	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126569:4011-4174	.	71	0.86	AAUGUAGGACCUUUGGUCAUUAUA		OtherRNA	ShortStack
ccm-b0.1r1-72225	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126587:3-322	-	53	0.65	UCCGAAUCCUCUUUCUCCGAAUCU		OtherRNA	ShortStack
ccm-b0.1r1-104160	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12663:2233-2800	.	46	0.56	AACGGGACAAGACGUGGAACAACC		OtherRNA	ShortStack
ccm-b0.1r1-104162	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12663:4864-5696	.	57	0.69	AUGGUCUGCAGCUCUUGGGGUUGU		OtherRNA	ShortStack
ccm-b0.1r1-137280	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126735:7177-7544	+	3,203	38.96	UUGUGAUUCUGAGCCAU		OtherRNA	ShortStack
ccm-b0.1r1-118326	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126749:8648-8844	-	46	0.56	UGAAAGACUGUUAUCUGGUUUCAUUACU		OtherRNA	ShortStack
ccm-b0.1r1-121677	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126825:7-399	-	3,180	38.68	UGCGGAAGGAUCAUUG		OtherRNA	ShortStack
ccm-b0.1r1-121678	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126825:872-1247	+	109	1.33	UCUUAGUUGGUGGAGG		OtherRNA	ShortStack
ccm-b0.1r1-107245	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126880:8401-8877	-	43	0.52	UCAAGAAGACGAAAGAUGAGA		OtherRNA	ShortStack
ccm-b0.1r1-119266	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126938:4982-5689	-	143	1.74	AACAGGACAGACAACAGCUCAU		OtherRNA	ShortStack
ccm-b0.1r1-119267	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126938:7173-7667	-	89	1.08	UGCACCAAGUCGGACU		OtherRNA	ShortStack
ccm-b0.1r1-92166	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig126956:6607-6831	-	55	0.67	AUGGGAAUAGUGAACUAGAACUUU		OtherRNA	ShortStack
ccm-b0.1r1-133664	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127:55049-55100	-	198	2.41	UAAGAUGUGAUAUGUAGAUUAUC		OtherRNA	ShortStack
ccm-b0.1r1-58224	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127044:1206-1703	.	49	0.60	AAGAGACUUGACUUUGAUG		OtherRNA	ShortStack
ccm-b0.1r1-134629	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127063:6428-6513	.	47	0.57	ACUGUAUUCCAGUAUCAACGGAUC		OtherRNA	ShortStack
ccm-b0.1r1-134634	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127063:23517-23717	.	120	1.46	GAGUGUGAGAUUCUGAUCUGGUAG		OtherRNA	ShortStack
ccm-b0.1r1-113551	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127133:827-1067	+	45	0.55	UUUGGAUUGAAGGGAA		OtherRNA	ShortStack
ccm-b0.1r1-126110	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127153:9166-10189	.	53	0.65	CGAAAGUGAAUCGGCU		OtherRNA	ShortStack
ccm-b0.1r1-126115	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127153:29432-29814	+	94	1.14	GAGAGCGUAUAUGGAUGUUAAAGAAACUGUGACA		OtherRNA	ShortStack
ccm-b0.1r1-48336	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127201:16342-17684	+	88	1.07	ACCCUUAACCCAAUGUAGA		OtherRNA	ShortStack
ccm-b0.1r1-11124	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12727:29386-29785	.	64	0.78	AAAAAAGAUUUUGUGGGACGGUGGU		OtherRNA	ShortStack
ccm-b0.1r1-110214	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12731:20140-20358	+	64	0.78	CUCGUGAGGCUUGACU		OtherRNA	ShortStack
ccm-b0.1r1-23732	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127366:2025-2988	-	95	1.16	AUUAGAGGAUGAGAACUAUCAAUU		OtherRNA	ShortStack
ccm-b0.1r1-23733	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127366:6320-6474	-	57	0.69	AAAGAGGAUCCAUCUUUGAAACCU		OtherRNA	ShortStack
ccm-b0.1r1-60635	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1274:1-235	+	34,056	414.27	GAUGUCGGCUCUUCCU		OtherRNA	ShortStack
ccm-b0.1r1-60636	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig1274:4155-4292	-	99	1.20	CCUGCGGAAAAAUAGCUU		OtherRNA	ShortStack
ccm-b0.1r1-14307	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127449:2-801	+	122	1.48	UAAGAUCAAAAGAAUUCCAUU		OtherRNA	ShortStack
ccm-b0.1r1-55551	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127460:1-517	.	78	0.95	AAUUACGUGUCGGGACUGCGAUGU		OtherRNA	ShortStack
ccm-b0.1r1-55552	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127460:1338-1790	.	43	0.52	UGACUUUUGGAACUGUUCAUCUAACU		OtherRNA	ShortStack
ccm-b0.1r1-134748	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12758:2862-3198	-	1,812	22.04	CCUUGUGGUCGUGGGU		OtherRNA	ShortStack
ccm-b0.1r1-136039	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12766:8590-8670	+	381	4.64	UCCGCUGUAGCGUAGGCU		OtherRNA	ShortStack
ccm-b0.1r1-136040	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12766:8844-9181	+	709	8.63	UCCGCUGUAGCGCAGGC		OtherRNA	ShortStack
ccm-b0.1r1-136042	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12766:11207-13136	.	142	1.73	AACGCGCCAACACUUUGUAACAGU		OtherRNA	ShortStack
ccm-b0.1r1-123084	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12768:14279-14487	.	61	0.74	CAACCAACUCGGAACC		OtherRNA	ShortStack
ccm-b0.1r1-21360	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12774:8938-9226	.	67	0.82	CGGAAUGAGUUGAACG		OtherRNA	ShortStack
ccm-b0.1r1-21362	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12774:11931-12441	.	54	0.66	ACAUCUGAACCAUUAAGAGGCUA		OtherRNA	ShortStack
ccm-b0.1r1-94867	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12782:1467-1509	+	44	0.54	UGAAAAUCCGGAGGACU		OtherRNA	ShortStack
ccm-b0.1r1-94871	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12782:10326-10497	.	87	1.06	CGUGAAGUUGGAAUAGUGCUCUGA		OtherRNA	ShortStack
ccm-b0.1r1-94872	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig12782:18763-19160	.	61	0.74	CUUUCCUUUCGGCGGCAAGCC		OtherRNA	ShortStack
ccm-b0.1r1-105756	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127844:9-635	.	65	0.79	GGUGAUCCGGCUGUGGAAGUGU		OtherRNA	ShortStack
ccm-b0.1r1-122193	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127893:3256-3387	+	310	3.77	UGACUCUAGUCUGACA		OtherRNA	ShortStack
ccm-b0.1r1-36431	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127914:290-532	.	50	0.61	GCGGACCGGGAACCGGUGAACCGG		OtherRNA	ShortStack
ccm-b0.1r1-55580	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig127940:42888-43775	.	74	0.90	AUCCUAACUUCAGGAGACUGUCCU		OtherRNA	ShortStack
ccm-b0.1r1-57848	Cuscuta campestris (Field Dodder) 0.1	Cp_v0.1_Contig128111:42937-43480	.	47	0.57	AGUCAAAGUAGAAUGAAAUCGGUC		OtherRNA	ShortStack