het siRNAsData from Lunardon et al. (2020)miRNA

Genome and annotations summary

Cicer arietinum (Chickpea) genome build 2.0 (car-b2.0)

Version 2.0 of Cicer arietinum cv. ICC4958 from The Cool Season Food Legume Crop Database

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Download genome assembly FASTA file

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Small RNA Loci

Click links below to show sub-sets of annotations

Parween_et_al_2015Srivastava_et_al_2015ShortStack
MIRNA139089
nearMIRNA34079
siRNA20405
siRNA21923608
siRNA22120385
siRNA239036
siRNA24108034,881
OtherRNA8904,318
NotExpressed6800


Small RNA-seq data

Reference Set

accessionaligned readsunaligned readssource dbis refset? Alignments that are reference sets (value of 1) are mergers of other component libraries used to compile master small RNA annotations for a species.tissueecotype / cultivargenotypereplicate id Alignments that are biological replicates have the same replicate idsrefset id If set, the alignment is part of the indicated reference setdescription
chickpea_all_reference_set113,926,79466,806,790none1mixedmixedwtrefset11merge of 10 libraries - reference set 1

Invidiual alignments (10)