het siRNAsData from Lunardon et al. (2020)miRNA

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Genome

Cicer arietinum (Chickpea) genome build 2.0 (car-b2.0)

Version 2.0 of Cicer arietinum cv. ICC4958 from The Cool Season Food Legume Crop Database

Locus type


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Annotation source

Name contains:

Family contains:

NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
car-b2.0r1-470Cicer arietinum (Chickpea) 2.0Ca_LG_1:4690430-4690513-11,94566.09AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAShortStack
MIRNA279Cicer arietinum (Chickpea) 2.0Ca_LG_1:5205928-5206176-8,29545.90UGCAUUUGCACCUGCACUUUAmiR530MIRNAParween_et_al_2015
MIRNA281Cicer arietinum (Chickpea) 2.0Ca_LG_1:5205928-5206176-8,29545.90UGCAUUUGCACCUGCACUUUAmiR530MIRNAParween_et_al_2015
MIRNA500Cicer arietinum (Chickpea) 2.0Ca_LG_1:5206015-5206263-8,29545.90UGCAUUUGCACCUGCACUUUAmiR530MIRNAParween_et_al_2015
car-b2.0r1-545Cicer arietinum (Chickpea) 2.0Ca_LG_1:5206039-5206155-8,29445.89UGCAUUUGCACCUGCACUUUAmiR530MIRNAShortStack
car-b2.0r1-556Cicer arietinum (Chickpea) 2.0Ca_LG_1:5294153-5294267+2,80115.50AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAShortStack
MIRNA38Cicer arietinum (Chickpea) 2.0Ca_LG_1:5294155-5294263+2,80115.50AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAParween_et_al_2015
MIRNA113Cicer arietinum (Chickpea) 2.0Ca_LG_1:7740619-7740700-1,92510.65UUGAGCCGUGCCAAUAUCACGmiR171MIRNAParween_et_al_2015
car-b2.0r1-839Cicer arietinum (Chickpea) 2.0Ca_LG_1:7740620-7740701-1,92510.65UUGAGCCGUGCCAAUAUCACGmiR171MIRNAShortStack
car-b2.0r1-1704Cicer arietinum (Chickpea) 2.0Ca_LG_1:16198543-16198663+2001.11UGAUUUUGUUAAACUCACUGUMIRNAShortStack
MIRNA201Cicer arietinum (Chickpea) 2.0Ca_LG_1:24859642-24859890+1,3247.33UGAGCCAGGAUGACUUGCCGGmiR169MIRNAParween_et_al_2015
MIRNA204Cicer arietinum (Chickpea) 2.0Ca_LG_1:24859642-24859890+1,3247.33UGAGCCAGGAUGACUUGCCGGmiR169MIRNAParween_et_al_2015
MIRNA205Cicer arietinum (Chickpea) 2.0Ca_LG_1:24859642-24859890+1,3247.33UGAGCCAGGAUGACUUGCCGGmiR169MIRNAParween_et_al_2015
car-b2.0r1-2350Cicer arietinum (Chickpea) 2.0Ca_LG_1:25241124-25241190+2,96816.42UAGCGAGUAUCUGUGCCUCUGAMIRNAShortStack
car-b2.0r1-2683Cicer arietinum (Chickpea) 2.0Ca_LG_1:28865712-28865799-1,7219.52UUUUUGUAGUGUAUAUCCCAAAMIRNAShortStack
car-b2.0r1-3281Cicer arietinum (Chickpea) 2.0Ca_LG_1:33688248-33688335-2,22112.29UUGAGCCGUGCCAAUAUCACAmiR171MIRNAShortStack
car-b2.0r1-3759Cicer arietinum (Chickpea) 2.0Ca_LG_1:37628068-37628186+12,95671.69UCAUUGAGUGCAGCGUUGAUGmiR397MIRNAShortStack
car-b2.0r1-3936Cicer arietinum (Chickpea) 2.0Ca_LG_1:39268826-39269082-158,441876.66UCGGACCAGGCUUCAUUCCCGmiR166MIRNAShortStack
car-b2.0r1-4487Cicer arietinum (Chickpea) 2.0Ca_LG_2:4742800-4742914+15,03783.20UGUGUUCUCAGGUCGCCCCUGmiR398MIRNAShortStack
MIRNA215Cicer arietinum (Chickpea) 2.0Ca_LG_2:4742824-4742898+15,03083.16UGUGUUCUCAGGUCGCCCCUGmiR398MIRNAParween_et_al_2015
car-b2.0r1-4609Cicer arietinum (Chickpea) 2.0Ca_LG_2:6247369-6247632+1,8039.98UCCAAAGGGAUCGCAUUGAUCCmiR393MIRNAShortStack
car-b2.0r1-4859Cicer arietinum (Chickpea) 2.0Ca_LG_2:8522412-8522485-1951.08UGAAGUGUUUGGGGGAACUCUmiR395MIRNAShortStack
car-b2.0r1-5008Cicer arietinum (Chickpea) 2.0Ca_LG_2:9928117-9928303+7,32840.55UUGGACUGAAGGGAGCUCCCmiR319MIRNAShortStack
MIRNA77Cicer arietinum (Chickpea) 2.0Ca_LG_2:9928126-9928303+7,32740.54UUGGACUGAAGGGAGCUCCCmiR319MIRNAParween_et_al_2015
car-b2.0r1-5042Cicer arietinum (Chickpea) 2.0Ca_LG_2:10254141-10254268+2,19312.13CGAAUCCUGAUGAUGCUGCAGmiR172MIRNAShortStack
car-b2.0r1-5190Cicer arietinum (Chickpea) 2.0Ca_LG_2:11642218-11642305+2,05911.39AAGCUCAGGAGGGAUAGCGCCmiR390MIRNAShortStack
MIRNA186Cicer arietinum (Chickpea) 2.0Ca_LG_3:3477842-3477981+24,491135.51UGGAGAAGCAGGGCACGUGCAmiR164MIRNAParween_et_al_2015
car-b2.0r1-9148Cicer arietinum (Chickpea) 2.0Ca_LG_3:24228524-24228675+1,95310.81AGAUAUAUAUGAUUGUCUUAAGMIRNAShortStack
MIRNA393Cicer arietinum (Chickpea) 2.0Ca_LG_3:28816989-28817237-970.54AACCCUCAAAGGCUUCCAUGGmiR5206MIRNAParween_et_al_2015
car-b2.0r1-9623Cicer arietinum (Chickpea) 2.0Ca_LG_3:28822546-28822753+5913.27UCCCUCAAAGGCUUCCAGUAUmiR862MIRNAShortStack
car-b2.0r1-9655Cicer arietinum (Chickpea) 2.0Ca_LG_3:29004637-29004753+1,7439.64UUACCAAUUCCGCCCAUUCCUAmiR482MIRNAShortStack
MIRNA231Cicer arietinum (Chickpea) 2.0Ca_LG_3:29004663-29004753+1,7369.61UUACCAAUUCCGCCCAUUCCUAmiR482MIRNAParween_et_al_2015
car-b2.0r1-9657Cicer arietinum (Chickpea) 2.0Ca_LG_3:29019785-29019935+56,684313.63UUGACAGAAGAUAGAGAGCACmiR156MIRNAShortStack
car-b2.0r1-10031Cicer arietinum (Chickpea) 2.0Ca_LG_3:32125570-32125731-1,1436.32UGAUAACAUUGUCGAUAACGGMIRNAShortStack
MIRNA344Cicer arietinum (Chickpea) 2.0Ca_LG_3:35584706-35584954+3,06916.98UGAAGCUGCCAGCAUGAUCUAmiR167MIRNAParween_et_al_2015
MIRNA89Cicer arietinum (Chickpea) 2.0Ca_LG_3:35584706-35584954+3,06916.98UGAAGCUGCCAGCAUGAUCUAmiR167MIRNAParween_et_al_2015
MIRNA91Cicer arietinum (Chickpea) 2.0Ca_LG_3:35584733-35584857+3,06816.98UGAAGCUGCCAGCAUGAUCUAmiR167MIRNAParween_et_al_2015
car-b2.0r1-10828Cicer arietinum (Chickpea) 2.0Ca_LG_3:39163148-39163243-28,052155.21UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAShortStack
MIRNA477Cicer arietinum (Chickpea) 2.0Ca_LG_3:41557770-41557887+1240.69UAUAACAGUCCCCACCGCUGCMIRNAParween_et_al_2015
MIRNA304Cicer arietinum (Chickpea) 2.0Ca_LG_3:41560991-41561070+64,222355.34UUAAUCAGGGAAAUCACAGUUGMIRNAParween_et_al_2015
car-b2.0r1-11395Cicer arietinum (Chickpea) 2.0Ca_LG_4:2514678-2514871+98,494544.97AUGCACUGCCUCUUCCCUGGCmiR408MIRNAShortStack
MIRNA242Cicer arietinum (Chickpea) 2.0Ca_LG_4:4864201-4864449-268,9781,488.26GUUGACAGAAGAGAGUGAGCACmiR156MIRNAParween_et_al_2015
car-b2.0r1-11623Cicer arietinum (Chickpea) 2.0Ca_LG_4:4864333-4864442-268,9701,488.21GUUGACAGAAGAGAGUGAGCACmiR156MIRNAShortStack
MIRNA243Cicer arietinum (Chickpea) 2.0Ca_LG_4:4864342-4864425-268,9691,488.21GUUGACAGAAGAGAGUGAGCACmiR156MIRNAParween_et_al_2015
MIRNA21Cicer arietinum (Chickpea) 2.0Ca_LG_4:4864342-4864425-268,9691,488.21GUUGACAGAAGAGAGUGAGCACmiR156MIRNAParween_et_al_2015
car-b2.0r1-11765Cicer arietinum (Chickpea) 2.0Ca_LG_4:6023343-6023455+11,05761.18UUGGCAUUCUGUCCACCUCCmiR394MIRNAShortStack
car-b2.0r1-11823Cicer arietinum (Chickpea) 2.0Ca_LG_4:6702050-6702264-20,611114.04UGAAGCUGCCAGCAUGAUCUGAmiR167MIRNAShortStack
MIRNA93Cicer arietinum (Chickpea) 2.0Ca_LG_4:6702128-6702194-20,454113.17UGAAGCUGCCAGCAUGAUCUGAmiR167MIRNAParween_et_al_2015
car-b2.0r1-11854Cicer arietinum (Chickpea) 2.0Ca_LG_4:6877225-6877320+9,70953.72AGAAUCUUGAUGAUGCUGCAGmiR172MIRNAShortStack
car-b2.0r1-11923Cicer arietinum (Chickpea) 2.0Ca_LG_4:7501933-7502128-61,637341.04UCGGACCAGGCUUCAUUCCCCmiR166MIRNAShortStack
MIRNA291Cicer arietinum (Chickpea) 2.0Ca_LG_4:17702906-17703154+2,87115.89CAGCCAAGGAUGACUUGCCGGmiR169MIRNAParween_et_al_2015
car-b2.0r1-13074Cicer arietinum (Chickpea) 2.0Ca_LG_4:17703007-17703214+2,87815.92CAGCCAAGGAUGACUUGCCGGmiR169MIRNAShortStack
MIRNA128Cicer arietinum (Chickpea) 2.0Ca_LG_4:17703038-17703286+2,88015.94CAGCCAAGGAUGACUUGCCGGmiR169MIRNAParween_et_al_2015
car-b2.0r1-13187Cicer arietinum (Chickpea) 2.0Ca_LG_4:19044127-19044392-158,856878.95UGACAGAAGAGAGUGAGCACmiR156MIRNAShortStack
MIRNA271Cicer arietinum (Chickpea) 2.0Ca_LG_4:19044174-19044259-158,820878.75UGACAGAAGAGAGUGAGCACmiR156MIRNAParween_et_al_2015
MIRNA249Cicer arietinum (Chickpea) 2.0Ca_LG_4:19567282-19567530+75,868419.78AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAParween_et_al_2015
car-b2.0r1-13249Cicer arietinum (Chickpea) 2.0Ca_LG_4:19567370-19567588+75,895419.93AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAShortStack
MIRNA39Cicer arietinum (Chickpea) 2.0Ca_LG_4:19567394-19567510+75,862419.75AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAParween_et_al_2015
car-b2.0r1-13315Cicer arietinum (Chickpea) 2.0Ca_LG_4:20042485-20042591-31,532174.47UUGACAGAAGAGAAUGAGCACmiR156MIRNAShortStack
car-b2.0r1-13665Cicer arietinum (Chickpea) 2.0Ca_LG_4:23110655-23110768+23,333129.10UGGAGAAGCAGGGCACGUGCAmiR164MIRNAShortStack
MIRNA389Cicer arietinum (Chickpea) 2.0Ca_LG_4:29512673-29512921+4622.56UGCCAAAGGAGAGUUGCCCUGmiR399MIRNAParween_et_al_2015
MIRNA145Cicer arietinum (Chickpea) 2.0Ca_LG_4:29512802-29513050+4622.56UGCCAAAGGAGAGUUGCCCUGmiR399MIRNAParween_et_al_2015
MIRNA152Cicer arietinum (Chickpea) 2.0Ca_LG_4:29512802-29513050+4622.56UGCCAAAGGAGAGUUGCCCUGmiR399MIRNAParween_et_al_2015
car-b2.0r1-14383Cicer arietinum (Chickpea) 2.0Ca_LG_4:29512822-29512901+4622.56UGCCAAAGGAGAGUUGCCCUGmiR399MIRNAShortStack
car-b2.0r1-14709Cicer arietinum (Chickpea) 2.0Ca_LG_4:31903064-31903234-37,165205.63UUACCGAUUCCACCCAUUCCUAmiR2118MIRNAShortStack
MIRNA232Cicer arietinum (Chickpea) 2.0Ca_LG_4:31903083-31903176-37,121205.39UUACCGAUUCCACCCAUUCCUAmiR2118MIRNAParween_et_al_2015
car-b2.0r1-14757Cicer arietinum (Chickpea) 2.0Ca_LG_4:32509669-32509919-30,861170.75UUGGACUGAAGGGGCCUCUUmiR319MIRNAShortStack
MIRNA79Cicer arietinum (Chickpea) 2.0Ca_LG_4:32509734-32509898-30,810170.47UUGGACUGAAGGGGCCUCUUmiR319MIRNAParween_et_al_2015
MIRNA308Cicer arietinum (Chickpea) 2.0Ca_LG_4:39019123-39019371-10,08355.79UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAParween_et_al_2015
MIRNA309Cicer arietinum (Chickpea) 2.0Ca_LG_4:39019123-39019371-10,08355.79UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAParween_et_al_2015
MIRNA139Cicer arietinum (Chickpea) 2.0Ca_LG_4:39019123-39019371-10,08355.79UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAParween_et_al_2015
MIRNA140Cicer arietinum (Chickpea) 2.0Ca_LG_4:39019247-39019495-10,08355.79UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAParween_et_al_2015
MIRNA142Cicer arietinum (Chickpea) 2.0Ca_LG_4:39019247-39019495-10,08355.79UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAParween_et_al_2015
car-b2.0r1-15336Cicer arietinum (Chickpea) 2.0Ca_LG_4:39019266-39019351-10,08355.79UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAShortStack
MIRNA144Cicer arietinum (Chickpea) 2.0Ca_LG_4:39019267-39019349-10,08355.79UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAParween_et_al_2015
MIRNA310Cicer arietinum (Chickpea) 2.0Ca_LG_4:39019267-39019349-10,08355.79UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAParween_et_al_2015
car-b2.0r1-17100Cicer arietinum (Chickpea) 2.0Ca_LG_5:7744782-7744866+1,4948.27AAGCUCAGGAGGGAUAGCGCCmiR390MIRNAShortStack
MIRNA224Cicer arietinum (Chickpea) 2.0Ca_LG_5:7744788-7744859+1,4948.27AAGCUCAGGAGGGAUAGCGCCmiR390MIRNAParween_et_al_2015
MIRNA447Cicer arietinum (Chickpea) 2.0Ca_LG_5:19023458-19023706+1,6248.99UCGAUAAACCUCUGCAUCCAGmiR162MIRNAParween_et_al_2015
MIRNA339Cicer arietinum (Chickpea) 2.0Ca_LG_5:19023458-19023706+1,6248.99UCGAUAAACCUCUGCAUCCAGmiR162MIRNAParween_et_al_2015
car-b2.0r1-17957Cicer arietinum (Chickpea) 2.0Ca_LG_5:19023478-19023576+1,6238.98UCGAUAAACCUCUGCAUCCAGmiR162MIRNAShortStack
MIRNA503Cicer arietinum (Chickpea) 2.0Ca_LG_5:27383016-27383264-2,69314.90UGGCGGAACUUUGUCCCGGGACMIRNAParween_et_al_2015
car-b2.0r1-18626Cicer arietinum (Chickpea) 2.0Ca_LG_5:27383128-27383245-2,69214.90UGGCGGAACUUUGUCCCGGGACMIRNAShortStack
car-b2.0r1-19403Cicer arietinum (Chickpea) 2.0Ca_LG_5:33862283-33862340+4612.55UCUAAAUCUUAAUCCAAUGGCMIRNAShortStack
MIRNA75Cicer arietinum (Chickpea) 2.0Ca_LG_5:34546056-34546231-19,867109.92UGGACUGAAGGGGAGCUCCUUCmiR319MIRNAParween_et_al_2015
car-b2.0r1-19469Cicer arietinum (Chickpea) 2.0Ca_LG_5:34546057-34546232-19,867109.92UGGACUGAAGGGGAGCUCCUUCmiR319MIRNAShortStack
MIRNA76Cicer arietinum (Chickpea) 2.0Ca_LG_5:35057211-35057386-19,790109.50UGGACUGAAGGGGAGCUCCUUCmiR319MIRNAParween_et_al_2015
car-b2.0r1-19531Cicer arietinum (Chickpea) 2.0Ca_LG_5:35057212-35057387-19,790109.50UGGACUGAAGGGGAGCUCCUUCmiR319MIRNAShortStack
MIRNA311Cicer arietinum (Chickpea) 2.0Ca_LG_5:36125994-36126242+1,6208.96UCGGACCAGGCUUCAUUCCUCmiR166MIRNAParween_et_al_2015
car-b2.0r1-19680Cicer arietinum (Chickpea) 2.0Ca_LG_5:36126134-36126240+1,6208.96UCGGACCAGGCUUCAUUCCUCmiR166MIRNAShortStack
MIRNA167Cicer arietinum (Chickpea) 2.0Ca_LG_5:36126139-36126221+1,6208.96UCGGACCAGGCUUCAUUCCUCmiR166MIRNAParween_et_al_2015
MIRNA189Cicer arietinum (Chickpea) 2.0Ca_LG_5:37160987-37161235-75,496417.72GGAAUGUUGUCUGGCUCGAGGmiR166MIRNAParween_et_al_2015
MIRNA192Cicer arietinum (Chickpea) 2.0Ca_LG_5:37160987-37161235-75,496417.72GGAAUGUUGUCUGGCUCGAGGmiR166MIRNAParween_et_al_2015
MIRNA190Cicer arietinum (Chickpea) 2.0Ca_LG_5:37161078-37161326-103,365571.92GGAAUGUUGUCUGGCUCGAGGmiR166MIRNAParween_et_al_2015
MIRNA164Cicer arietinum (Chickpea) 2.0Ca_LG_5:37161114-37161362-105,432583.36GGAAUGUUGUCUGGCUCGAGGmiR166MIRNAParween_et_al_2015
MIRNA196Cicer arietinum (Chickpea) 2.0Ca_LG_5:37161114-37161362-105,432583.36GGAAUGUUGUCUGGCUCGAGGmiR166MIRNAParween_et_al_2015
car-b2.0r1-19818Cicer arietinum (Chickpea) 2.0Ca_LG_5:37161127-37161391-105,435583.37GGAAUGUUGUCUGGCUCGAGGmiR166MIRNAShortStack
MIRNA162Cicer arietinum (Chickpea) 2.0Ca_LG_5:37161147-37161395-105,434583.37GGAAUGUUGUCUGGCUCGAGGmiR166MIRNAParween_et_al_2015
MIRNA191Cicer arietinum (Chickpea) 2.0Ca_LG_5:37161147-37161395-105,434583.37GGAAUGUUGUCUGGCUCGAGGmiR166MIRNAParween_et_al_2015
car-b2.0r1-20082Cicer arietinum (Chickpea) 2.0Ca_LG_5:39335547-39335659-6,87338.03UUGGCAUUCUGUCCACCUCCmiR394MIRNAShortStack
MIRNA321Cicer arietinum (Chickpea) 2.0Ca_LG_5:39335567-39335637-6,86838.00UUGGCAUUCUGUCCACCUCCmiR394MIRNAParween_et_al_2015
MIRNA250Cicer arietinum (Chickpea) 2.0Ca_LG_6:1293510-1293758-9,84454.47AGAAUCUUGAUGAUGCUGCAGmiR172MIRNAParween_et_al_2015
MIRNA24Cicer arietinum (Chickpea) 2.0Ca_LG_6:1293510-1293758-9,84454.47AGAAUCUUGAUGAUGCUGCAGmiR172MIRNAParween_et_al_2015
MIRNA30Cicer arietinum (Chickpea) 2.0Ca_LG_6:1293510-1293758-9,84454.47AGAAUCUUGAUGAUGCUGCAGmiR172MIRNAParween_et_al_2015
car-b2.0r1-21052Cicer arietinum (Chickpea) 2.0Ca_LG_6:1293642-1293741-9,84354.46AGAAUCUUGAUGAUGCUGCAGmiR172MIRNAShortStack
MIRNA37Cicer arietinum (Chickpea) 2.0Ca_LG_6:1293644-1293736-9,84354.46AGAAUCUUGAUGAUGCUGCAGmiR172MIRNAParween_et_al_2015
MIRNA285Cicer arietinum (Chickpea) 2.0Ca_LG_6:3552731-3552979-51,568285.33UUGACAGAAGAUAGAGAGCACmiR156MIRNAParween_et_al_2015
MIRNA288Cicer arietinum (Chickpea) 2.0Ca_LG_6:3552731-3552979-51,568285.33UUGACAGAAGAUAGAGAGCACmiR156MIRNAParween_et_al_2015
MIRNA426Cicer arietinum (Chickpea) 2.0Ca_LG_6:3552858-3553106-51,559285.28UUGACAGAAGAUAGAGAGCACmiR156MIRNAParween_et_al_2015
MIRNA1Cicer arietinum (Chickpea) 2.0Ca_LG_6:3552858-3553106-51,559285.28UUGACAGAAGAUAGAGAGCACmiR156MIRNAParween_et_al_2015
MIRNA194Cicer arietinum (Chickpea) 2.0Ca_LG_6:4833253-4833501+537,1702,972.17GUUCGGACCAGGCUUCAUUCCCCmiR166MIRNAParween_et_al_2015
MIRNA165Cicer arietinum (Chickpea) 2.0Ca_LG_6:4833410-4833658+207,3151,147.08UCGGACCAGGCUUCAUUCCCCmiR166MIRNAParween_et_al_2015
MIRNA247Cicer arietinum (Chickpea) 2.0Ca_LG_6:7673733-7673981-1300.72UAGCCAAGGAUGGCUUGCCUAGmiR169MIRNAParween_et_al_2015
MIRNA248Cicer arietinum (Chickpea) 2.0Ca_LG_6:7673733-7673981-1300.72UAGCCAAGGAUGGCUUGCCUAGmiR169MIRNAParween_et_al_2015
car-b2.0r1-21821Cicer arietinum (Chickpea) 2.0Ca_LG_6:7673850-7673960-1300.72UAGCCAAGGAUGGCUUGCCUAGmiR169MIRNAShortStack
MIRNA149Cicer arietinum (Chickpea) 2.0Ca_LG_6:11069384-11069632+1490.82UGCCAAAGGAGAUUUGCCCAGmiR399MIRNAParween_et_al_2015
car-b2.0r1-22196Cicer arietinum (Chickpea) 2.0Ca_LG_6:11069524-11069610+1490.82UGCCAAAGGAGAUUUGCCCAGmiR399MIRNAShortStack
MIRNA462Cicer arietinum (Chickpea) 2.0Ca_LG_6:13671605-13671853+3952.19UUUCCAUUUUAGCUUUAGCUUMIRNAParween_et_al_2015
car-b2.0r1-22508Cicer arietinum (Chickpea) 2.0Ca_LG_6:13671624-13671719+3952.19UUUCCAUUUUAGCUUUAGCUUMIRNAShortStack
car-b2.0r1-23513Cicer arietinum (Chickpea) 2.0Ca_LG_6:22465923-22466045+8,89949.24UCGCUGUUGCGUUGGCGAUUAMIRNAShortStack
car-b2.0r1-23516Cicer arietinum (Chickpea) 2.0Ca_LG_6:22478703-22478816+8,90849.29UCGCUGUUGCGUUGGCGAUUAMIRNAShortStack
MIRNA296Cicer arietinum (Chickpea) 2.0Ca_LG_6:24609986-24610234+1811.00GGGCAUAUCUUCUUUGGCAGGmiR399MIRNAParween_et_al_2015
MIRNA348Cicer arietinum (Chickpea) 2.0Ca_LG_6:39119045-39119293+8,94349.48UUGAGCCGCGUCAAUAUCUCGmiR171MIRNAParween_et_al_2015
MIRNA351Cicer arietinum (Chickpea) 2.0Ca_LG_6:39119045-39119293+8,94349.48UUGAGCCGCGUCAAUAUCUCGmiR171MIRNAParween_et_al_2015
car-b2.0r1-24887Cicer arietinum (Chickpea) 2.0Ca_LG_6:39119139-39119328+8,95649.55UUGAGCCGCGUCAAUAUCUCGmiR171MIRNAShortStack
MIRNA350Cicer arietinum (Chickpea) 2.0Ca_LG_6:39119167-39119415+8,95349.54UUGAGCCGCGUCAAUAUCUCGmiR171MIRNAParween_et_al_2015
MIRNA29Cicer arietinum (Chickpea) 2.0Ca_LG_6:46160798-46161046-5,39429.85GUAGCAUCAUCAAGAUUCACmiR172MIRNAParween_et_al_2015
car-b2.0r1-25420Cicer arietinum (Chickpea) 2.0Ca_LG_6:46160917-46161032-5,39429.85GUAGCAUCAUCAAGAUUCACmiR172MIRNAShortStack
car-b2.0r1-25493Cicer arietinum (Chickpea) 2.0Ca_LG_6:46792544-46792654-2151.19UGGUAUGUGAUUUGUAAAUGGMIRNAShortStack
MIRNA240Cicer arietinum (Chickpea) 2.0Ca_LG_6:54293453-54293701-3632.01UUGAUGUUGGCUUGGUUCAAUMIRNAParween_et_al_2015
MIRNA379Cicer arietinum (Chickpea) 2.0Ca_LG_6:54293453-54293701-3632.01UUGAUGUUGGCUUGGUUCAAUMIRNAParween_et_al_2015
MIRNA464Cicer arietinum (Chickpea) 2.0Ca_LG_6:54293459-54293707-3632.01UUGAUGUUGGCUUGGUUCAAUMIRNAParween_et_al_2015
MIRNA235Cicer arietinum (Chickpea) 2.0Ca_LG_6:54293581-54293829-3642.01UUGAUGUUGGCUUGGUUCAAUMIRNAParween_et_al_2015
MIRNA378Cicer arietinum (Chickpea) 2.0Ca_LG_6:54293581-54293829-3642.01UUGAUGUUGGCUUGGUUCAAUMIRNAParween_et_al_2015
car-b2.0r1-26462Cicer arietinum (Chickpea) 2.0Ca_LG_7:1249824-1250061-3,99622.11UUCAUUUUUAAAAUAGGCAUUGmiR1514MIRNAShortStack
MIRNA333Cicer arietinum (Chickpea) 2.0Ca_LG_7:1249906-1249970-3,91021.63UUCAUUUUUAAAAUAGGCAUUGmiR1514MIRNAParween_et_al_2015
MIRNA277Cicer arietinum (Chickpea) 2.0Ca_LG_7:6526725-6526973+2181.21UGGAGAAGCAGGGCACAUGCUmiR164MIRNAParween_et_al_2015
MIRNA278Cicer arietinum (Chickpea) 2.0Ca_LG_7:6526748-6526811+2131.18UGGAGAAGCAGGGCACAUGCUmiR164MIRNAParween_et_al_2015
car-b2.0r1-27584Cicer arietinum (Chickpea) 2.0Ca_LG_7:15415792-15415943+98,474544.86UGAAGCUGCCAGCAUGAUCUUAmiR167MIRNAShortStack
MIRNA81Cicer arietinum (Chickpea) 2.0Ca_LG_7:15415835-15415948+98,467544.82UGAAGCUGCCAGCAUGAUCUUAmiR167MIRNAParween_et_al_2015
MIRNA82Cicer arietinum (Chickpea) 2.0Ca_LG_7:15415835-15415948+98,467544.82UGAAGCUGCCAGCAUGAUCUUAmiR167MIRNAParween_et_al_2015
MIRNA84Cicer arietinum (Chickpea) 2.0Ca_LG_7:15415835-15415948+98,467544.82UGAAGCUGCCAGCAUGAUCUUAmiR167MIRNAParween_et_al_2015
MIRNA377Cicer arietinum (Chickpea) 2.0Ca_LG_7:15415835-15415948+98,467544.82UGAAGCUGCCAGCAUGAUCUUAmiR167MIRNAParween_et_al_2015
MIRNA94Cicer arietinum (Chickpea) 2.0Ca_LG_7:15415858-15415927+98,458544.77UGAAGCUGCCAGCAUGAUCUUAmiR167MIRNAParween_et_al_2015
car-b2.0r1-28161Cicer arietinum (Chickpea) 2.0Ca_LG_7:23545476-23545608+44,809247.93AACCAGGCUCUGAUACCAUGAmiR1511MIRNAShortStack
car-b2.0r1-28603Cicer arietinum (Chickpea) 2.0Ca_LG_7:27708745-27708848+11,14161.64UGAUUGAGCCGUGCCAAUAUCmiR171MIRNAShortStack
car-b2.0r1-28677Cicer arietinum (Chickpea) 2.0Ca_LG_7:28235184-28235354+840,2014,648.84UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAShortStack
car-b2.0r1-30009Cicer arietinum (Chickpea) 2.0Ca_LG_7:38963912-38964025+1,1756.50CAGCCAAGGAUGACUUGCCGGmiR169MIRNAShortStack
MIRNA125Cicer arietinum (Chickpea) 2.0Ca_LG_7:38963916-38964165+1,1776.51CAGCCAAGGAUGACUUGCCGGmiR169MIRNAParween_et_al_2015
MIRNA293Cicer arietinum (Chickpea) 2.0Ca_LG_7:38963940-38964024+1,1726.49CAGCCAAGGAUGACUUGCCGGmiR169MIRNAParween_et_al_2015
car-b2.0r1-30011Cicer arietinum (Chickpea) 2.0Ca_LG_7:38971930-38972042+1,6028.86UGAGCCAGGGAUGACUUGCCGmiR169MIRNAShortStack
MIRNA99Cicer arietinum (Chickpea) 2.0Ca_LG_7:41261878-41262126-2,38513.20UUGAGCCGCGCCAAUAUCACUmiR171MIRNAParween_et_al_2015
MIRNA101Cicer arietinum (Chickpea) 2.0Ca_LG_7:41261878-41262126-2,38513.20UUGAGCCGCGCCAAUAUCACUmiR171MIRNAParween_et_al_2015
MIRNA381Cicer arietinum (Chickpea) 2.0Ca_LG_7:41261878-41262126-2,38513.20UUGAGCCGCGCCAAUAUCACUmiR171MIRNAParween_et_al_2015
MIRNA238Cicer arietinum (Chickpea) 2.0Ca_LG_7:41262000-41262248-2,38413.19UUGAGCCGCGCCAAUAUCACUmiR171MIRNAParween_et_al_2015
car-b2.0r1-30239Cicer arietinum (Chickpea) 2.0Ca_LG_7:41262002-41262147-2,38313.19UUGAGCCGCGCCAAUAUCACUmiR171MIRNAShortStack
MIRNA109Cicer arietinum (Chickpea) 2.0Ca_LG_7:41262021-41262107-2,36313.07UUGAGCCGCGCCAAUAUCACUmiR171MIRNAParween_et_al_2015
car-b2.0r1-30301Cicer arietinum (Chickpea) 2.0Ca_LG_7:41808202-41808353+73,902408.90UGACAGAAGAGAGUGAGCACmiR156MIRNAShortStack
MIRNA244Cicer arietinum (Chickpea) 2.0Ca_LG_7:41808249-41808332+73,882408.79UGACAGAAGAGAGUGAGCACmiR156MIRNAParween_et_al_2015
MIRNA22Cicer arietinum (Chickpea) 2.0Ca_LG_7:41808249-41808332+73,882408.79UGACAGAAGAGAGUGAGCACmiR156MIRNAParween_et_al_2015
MIRNA346Cicer arietinum (Chickpea) 2.0Ca_LG_7:43963697-43963945+9,86054.56UUGAGCCGUGCCAAUAUCACGmiR171MIRNAParween_et_al_2015
car-b2.0r1-30532Cicer arietinum (Chickpea) 2.0Ca_LG_7:43963797-43963989+9,86454.58UUGAGCCGUGCCAAUAUCACGmiR171MIRNAShortStack
MIRNA112Cicer arietinum (Chickpea) 2.0Ca_LG_7:43963838-43963925+9,84554.47UUGAGCCGUGCCAAUAUCACGmiR171MIRNAParween_et_al_2015
MIRNA175Cicer arietinum (Chickpea) 2.0Ca_LG_7:44399934-44400182+64,285355.69UUCCACAGCUUUCUUGAACUGmiR396MIRNAParween_et_al_2015
MIRNA259Cicer arietinum (Chickpea) 2.0Ca_LG_7:44399934-44400182+64,285355.69UUCCACAGCUUUCUUGAACUGmiR396MIRNAParween_et_al_2015
MIRNA386Cicer arietinum (Chickpea) 2.0Ca_LG_7:44399934-44400182+64,285355.69UUCCACAGCUUUCUUGAACUGmiR396MIRNAParween_et_al_2015
car-b2.0r1-30583Cicer arietinum (Chickpea) 2.0Ca_LG_7:44399945-44400077+64,281355.67UUCCACAGCUUUCUUGAACUGmiR396MIRNAShortStack
MIRNA173Cicer arietinum (Chickpea) 2.0Ca_LG_7:44408836-44409084-87,041481.60UUCCACAGCUUUCUUGAACUUmiR396MIRNAParween_et_al_2015
MIRNA264Cicer arietinum (Chickpea) 2.0Ca_LG_7:44408836-44409084-87,041481.60UUCCACAGCUUUCUUGAACUUmiR396MIRNAParween_et_al_2015
MIRNA387Cicer arietinum (Chickpea) 2.0Ca_LG_7:44408836-44409084-87,041481.60UUCCACAGCUUUCUUGAACUUmiR396MIRNAParween_et_al_2015
car-b2.0r1-30584Cicer arietinum (Chickpea) 2.0Ca_LG_7:44408918-44409190-87,063481.72UUCCACAGCUUUCUUGAACUUmiR396MIRNAShortStack
MIRNA168Cicer arietinum (Chickpea) 2.0Ca_LG_7:44408943-44409191-87,061481.71UUCCACAGCUUUCUUGAACUUmiR396MIRNAParween_et_al_2015
MIRNA268Cicer arietinum (Chickpea) 2.0Ca_LG_7:44408943-44409191-87,061481.71UUCCACAGCUUUCUUGAACUUmiR396MIRNAParween_et_al_2015
MIRNA388Cicer arietinum (Chickpea) 2.0Ca_LG_7:44408943-44409191-87,061481.71UUCCACAGCUUUCUUGAACUUmiR396MIRNAParween_et_al_2015
MIRNA176Cicer arietinum (Chickpea) 2.0Ca_LG_7:44408971-44409061-87,032481.55UUCCACAGCUUUCUUGAACUUmiR396MIRNAParween_et_al_2015
MIRNA100Cicer arietinum (Chickpea) 2.0Ca_LG_7:44451892-44452140-2,33012.89UUGAGCCGCGCCAAUAUCACUmiR171MIRNAParween_et_al_2015
MIRNA102Cicer arietinum (Chickpea) 2.0Ca_LG_7:44451892-44452140-2,33012.89UUGAGCCGCGCCAAUAUCACUmiR171MIRNAParween_et_al_2015
MIRNA382Cicer arietinum (Chickpea) 2.0Ca_LG_7:44451892-44452140-2,33012.89UUGAGCCGCGCCAAUAUCACUmiR171MIRNAParween_et_al_2015
car-b2.0r1-30590Cicer arietinum (Chickpea) 2.0Ca_LG_7:44452009-44452156-2,32712.88UUGAGCCGCGCCAAUAUCACUmiR171MIRNAShortStack
MIRNA239Cicer arietinum (Chickpea) 2.0Ca_LG_7:44452014-44452262-2,32812.88UUGAGCCGCGCCAAUAUCACUmiR171MIRNAParween_et_al_2015
MIRNA110Cicer arietinum (Chickpea) 2.0Ca_LG_7:44452035-44452121-2,31112.79UUGAGCCGCGCCAAUAUCACUmiR171MIRNAParween_et_al_2015
car-b2.0r1-32280Cicer arietinum (Chickpea) 2.0Ca_LG_8:15018325-15018441+77,406428.29UCGCUUGGUGCAGGUCGGGAAmiR168MIRNAShortStack
car-b2.0r1-32508Cicer arietinum (Chickpea) 2.0Ca_LG_8:16558614-16558783+1,91610.60UUUGUGAGUAGACCAAACCAAAMIRNAShortStack
car-b2.0r1-33750Cicer arietinum (Chickpea) 2.0contig64320:290-384-1,4908.24UUCAGAGACUUUGAACAUACAMIRNAShortStack
car-b2.0r1-34250Cicer arietinum (Chickpea) 2.0scaffold01310:32384-32502-7,82543.30UUGUGUUCUCAGGUCACCCCUmiR398MIRNAShortStack
MIRNA214Cicer arietinum (Chickpea) 2.0scaffold01310:32388-32495-7,82543.30UUGUGUUCUCAGGUCACCCCUmiR398MIRNAParween_et_al_2015
MIRNA542Cicer arietinum (Chickpea) 2.0scaffold01564:7703-7951+8044.45UGGGUGAAAUUCAUGUAGUUCMIRNAParween_et_al_2015
car-b2.0r1-34388Cicer arietinum (Chickpea) 2.0scaffold01564:7722-7804+8024.44UGGGUGAAAUUCAUGUAGUUCMIRNAShortStack
MIRNA237Cicer arietinum (Chickpea) 2.0scaffold01927:44218-44466+1,86110.30UUGAGCCGUGCCAAUAUCACGmiR171MIRNAParween_et_al_2015
MIRNA105Cicer arietinum (Chickpea) 2.0scaffold01927:44218-44466+1,86110.30UUGAGCCGUGCCAAUAUCACGmiR171MIRNAParween_et_al_2015
car-b2.0r1-34596Cicer arietinum (Chickpea) 2.0scaffold01927:44361-44455+1,85610.27UUGAGCCGUGCCAAUAUCACGmiR171MIRNAShortStack
MIRNA111Cicer arietinum (Chickpea) 2.0scaffold01927:44364-44447+1,85610.27UUGAGCCGUGCCAAUAUCACGmiR171MIRNAParween_et_al_2015
MIRNA482Cicer arietinum (Chickpea) 2.0scaffold02747:19264-19512-930.52AUUGGAGUGAAGGGAGCUCCAmiR159MIRNAParween_et_al_2015
car-b2.0r1-35413Cicer arietinum (Chickpea) 2.0scaffold03085:27725-27897+1,1166.18GAGCCAAGGAUGACUUGCCGGmiR169MIRNAShortStack
MIRNA315Cicer arietinum (Chickpea) 2.0scaffold03098:9764-9874-4502.49GUCCUCAAGAUGCAGAUUACCMIRNAParween_et_al_2015
MIRNA384Cicer arietinum (Chickpea) 2.0scaffold03098:9764-9874-4502.49GUCCUCAAGAUGCAGAUUACCMIRNAParween_et_al_2015
car-b2.0r1-35421Cicer arietinum (Chickpea) 2.0scaffold03098:9786-9869-4502.49GUCCUCAAGAUGCAGAUUACCMIRNAShortStack
car-b2.0r1-35619Cicer arietinum (Chickpea) 2.0scaffold03343:24105-24232-3131.73UUAAAAUCUACAUGGGUCCCMIRNAShortStack
MIRNA63Cicer arietinum (Chickpea) 2.0scaffold03355:22128-22376-177,303981.02UUGGACUGAAGGGAGCUCCCmiR319MIRNAParween_et_al_2015
MIRNA392Cicer arietinum (Chickpea) 2.0scaffold03355:22128-22376-177,303981.02UUGGACUGAAGGGAGCUCCCmiR319MIRNAParween_et_al_2015
car-b2.0r1-35633Cicer arietinum (Chickpea) 2.0scaffold03355:22177-22357-177,303981.02UUGGACUGAAGGGAGCUCCCmiR319MIRNAShortStack
car-b2.0r1-35800Cicer arietinum (Chickpea) 2.0scaffold03551:20381-20523+21,173117.15AAGCUCGGGAGGGAUAGCGCCmiR390MIRNAShortStack
MIRNA225Cicer arietinum (Chickpea) 2.0scaffold03551:20394-20484+21,085116.66AAGCUCGGGAGGGAUAGCGCCmiR390MIRNAParween_et_al_2015
car-b2.0r1-35876Cicer arietinum (Chickpea) 2.0scaffold03681:15266-15361-2311.28UGCCAAAGGAGAGCUGCCCUGmiR399MIRNAShortStack
MIRNA483Cicer arietinum (Chickpea) 2.0scaffold03681:17111-17254+1640.91UGCCAAAGGAGAGUUGUCCUGmiR399MIRNAParween_et_al_2015
MIRNA316Cicer arietinum (Chickpea) 2.0scaffold04261:13869-13976-2,56614.20GUCCUCGGAAUGCAGAUUAUCMIRNAParween_et_al_2015
MIRNA354Cicer arietinum (Chickpea) 2.0scaffold04261:13869-13976-2,56614.20GUCCUCGGAAUGCAGAUUAUCMIRNAParween_et_al_2015
MIRNA355Cicer arietinum (Chickpea) 2.0scaffold04261:13869-13976-2,56614.20GUCCUCGGAAUGCAGAUUAUCMIRNAParween_et_al_2015
MIRNA92Cicer arietinum (Chickpea) 2.0scaffold04485:8657-8724-6,62136.63UGAAGCUGCCAGCAUGAUCUCAmiR167MIRNAParween_et_al_2015
MIRNA358Cicer arietinum (Chickpea) 2.0scaffold05782:3134-3382-5783.20GGGCAUGUCUCUUUUGGCAGGmiR399MIRNAParween_et_al_2015
car-b2.0r1-37301Cicer arietinum (Chickpea) 2.0scaffold05782:3155-3268-5713.16GGGCAUGUCUCUUUUGGCAGGmiR399MIRNAShortStack
MIRNA359Cicer arietinum (Chickpea) 2.0scaffold05782:3155-3263-5713.16GGGCAUGUCUCUUUUGGCAGGmiR399MIRNAParween_et_al_2015
car-b2.0r1-37556Cicer arietinum (Chickpea) 2.0scaffold06350:9302-9399+2,20412.20UUGAGCCGUGCCAAUAUCACAmiR171MIRNAShortStack
MIRNA535Cicer arietinum (Chickpea) 2.0scaffold08365:3703-3951-3,37218.66UUUUUGUAGUGUAUAUCCCAAAMIRNAParween_et_al_2015
car-b2.0r1-38214Cicer arietinum (Chickpea) 2.0scaffold08365:3727-3812-3,24717.97UUUUUGUAGUGUAUAUCCCAAAMIRNAShortStack
car-b2.0r1-38942Cicer arietinum (Chickpea) 2.0scaffold11334:2350-2477-1,2266.78UUGAGCCGCGUCAAUAUCUUGmiR171MIRNAShortStack
car-b2.0r1-39766Cicer arietinum (Chickpea) 2.0scaffold17769:3302-3473+2,28612.65CGAAUCCUGAUGAUGCUGCAGmiR172MIRNAShortStack
MIRNA40Cicer arietinum (Chickpea) 2.0scaffold17769:3345-3435+2,26812.55CGAAUCCUGAUGAUGCUGCAGmiR172MIRNAParween_et_al_2015
car-b2.0r1-39904Cicer arietinum (Chickpea) 2.0scaffold19407:6549-6644+2241.24UGCCAAAGGAGAGCUGCCCUGmiR399MIRNAShortStack
car-b2.0r1-39967Cicer arietinum (Chickpea) 2.0scaffold19899:1151-1322+839,0034,642.21UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAShortStack
MIRNA41Cicer arietinum (Chickpea) 2.0scaffold19984:3068-3317-841,4104,655.53UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAParween_et_al_2015
MIRNA42Cicer arietinum (Chickpea) 2.0scaffold19984:3068-3317-841,4104,655.53UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAParween_et_al_2015
MIRNA55Cicer arietinum (Chickpea) 2.0scaffold19984:3068-3317-841,4104,655.53UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAParween_et_al_2015
car-b2.0r1-39977Cicer arietinum (Chickpea) 2.0scaffold19984:3084-3253-841,4104,655.53UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAShortStack
MIRNA59Cicer arietinum (Chickpea) 2.0scaffold19984:3084-3251-841,4104,655.53UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAParween_et_al_2015
MIRNA60Cicer arietinum (Chickpea) 2.0scaffold19984:3084-3251-841,4104,655.53UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAParween_et_al_2015
car-b2.0r1-40159Cicer arietinum (Chickpea) 2.0scaffold22485:2614-2701+2,21012.23UUGAGCCGUGCCAAUAUCACAmiR171MIRNAShortStack
MIRNA284Cicer arietinum (Chickpea) 2.0scaffold23744:1039-1274+10,49058.04UUGACAGAAGAUAGAGAGCACmiR156MIRNAParween_et_al_2015