het siRNAsData from Lunardon et al. (2020)miRNA

Genome and annotations summary

Musa acuminata (Banana) genome build 2 (mac-b2)

Version v2 of Musa acuminata cv. DH-Pahang from The Banana Genome Hub

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Download genome assembly FASTA file

BLAST search


Small RNA Loci

Click links below to show sub-sets of annotations

ShortStack
MIRNA68
nearMIRNA70
siRNA2070
siRNA211,040
siRNA2296
siRNA23191
siRNA2426,211
OtherRNA3,079
NotExpressed0


Small RNA-seq data

Reference Set

accessionaligned readsunaligned readssource dbis refset? Alignments that are reference sets (value of 1) are mergers of other component libraries used to compile master small RNA annotations for a species.tissueecotype / cultivargenotypereplicate id Alignments that are biological replicates have the same replicate idsrefset id If set, the alignment is part of the indicated reference setdescription
banana_all_reference_set57,341,42231,691,312none1mixedmixedwtrefset11merge of 10 libraries - reference set 1

Invidiual alignments (10)