Data from Lunardon et al. (2020)

Annotations viewer

Genome

Cuscuta campestris (Field Dodder) genome build 0.32 (ccm-b0.32)

Version 0.32 assembly of the Cuscuta campestris genome from Vogel et al. 2018

Locus type

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Annotation source

Name contains:

Family contains:

Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
ccm-b0.32r1-82004	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:809822-809969	-	3,125	38.01	UCGGACCAGGCUUCAUUCCCC	miR166	MIRNA	ShortStack
ccm-MIR12469b_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:146587-146740	-	59,201	720.15	CAGCUCGAAUCGUAGUAACCGA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-21492	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:906127-906374	-	5,318	64.69	GAGUGACGAGAAAGUGGCGUA		MIRNA	ShortStack
ccm-MIR12466_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:906235-906418	-	5,308	64.57	GAGUGACGAGAAAGUGGCGUA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-21639	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1297525-1297707	+	317	3.86	UUGAGCCGUGCCAAUAUCACG	miR171	MIRNA	ShortStack
ccm-MIR12481_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:33510-33624	-	8,284	100.77	AUAUGUAGCAAUUUUGAAGAAU		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-83269	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:66669-66831	+	106	1.29	GAUAAAGGAGACUAGGAAGUU		MIRNA	ShortStack
ccm-b0.32r1-83421	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:566254-566405	-	412	5.01	GCCUGUUUCCCCUAAUGACGCC		MIRNA	ShortStack
ccm-MIR12496_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:879140-879247	+	8,575	104.31	GCUCAGGGGCCGAGAUGCAUG		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-83510	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:879140-879313	+	8,576	104.32	GCUCAGGGGCCGAGAUGCAUG		MIRNA	ShortStack
ccm-MIR12476b_m2	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1580665-1580857	+	481	5.85	UAGUUUCACCCACCGUCUCUC		MIRNA	Shahid_et_al_2018
ccm-MIR12476a_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1580719-1580872	+	485	5.90	UAGUUUCACCCACCGUCUCUC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-84123	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:801250-801547	+	176,496	2,146.99	UGUACCAUGAUUUGUAGACGAG		MIRNA	ShortStack
ccm-MIR12497a_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:801256-801507	+	176,493	2,146.95	UGUACCAUGAUUUGUAGACGAG		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-23068	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold12:2624646-2624901	-	2,012	24.48	CCCGCUUUGCAUCAACUGAAU	miR168	MIRNA	ShortStack
ccm-MIR12486_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold130:959321-959425	+	10,758	130.87	CCCGCACCUGAACUUCCAAAGA		MIRNA	Shahid_et_al_2018
ccm-MIR12480_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold136:450369-450528	-	5,071	61.69	UGUCCUCUCCUCCGUAUAGGUA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-94130	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold138:937502-937599	-	451	5.49	GCGUAUGUGGAGCCAAGCAUG	miR160	MIRNA	ShortStack
ccm-MIR12497a_m2	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold13b:579762-580012	+	441	5.37	UGUACCAUGAUUUGCACACGAG		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-23835	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold13b:579791-580041	+	442	5.38	UGUACCAUGAUUUGCACACGAG		MIRNA	ShortStack
ccm-b0.32r1-24548	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold13b:2867307-2867476	-	18,365	223.40	UGAGACUGAAGAAGAUUGCCCCC		MIRNA	ShortStack
ccm-b0.32r1-24849	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold13b:3654869-3654968	+	475	5.78	UGAAGCUGCCAGCAUGAUCUU	miR167	MIRNA	ShortStack
ccm-MIR12468_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold142:389126-389254	+	1,150	13.99	GAGAUUGCUGAAAAAGAAGAA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-96192	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold145:1200381-1200552	+	54	0.66	UUGAUGCUCUAAUUGAUUGUG		MIRNA	ShortStack
ccm-MIR12485_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold148:459148-459258	+	1,098	13.36	CUGUGUAGGUAAUUUAACCCUC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-97398	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold149:796343-796553	+	82	1.00	ACUGGAAGUAUUCAGGGUCUA		MIRNA	ShortStack
ccm-b0.32r1-25266	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold14b:258734-259003	-	200	2.43	UGUUGAUAUGAGAAUGUGAGAUG		MIRNA	ShortStack
ccm-MIR12470_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold14b:884798-884899	-	3,579	43.54	GUAAAGGACAAUACAAGUGCU		MIRNA	Shahid_et_al_2018
ccm-MIR12480_m2	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold14b:1787349-1787510	-	7,834	95.30	UCUGUGCGGAGGAGAGGACGGC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-97453	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold150:78209-78388	-	103	1.25	CCACUCGGCGGCCACUGACGA		MIRNA	ShortStack
ccm-MIR12471_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold155:552668-552777	-	3,828	46.57	ACAGGAGAGAAUGAAAAUGGA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-98880	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold155:552676-552790	-	3,828	46.57	ACAGGAGAGAAUGAAAAUGGA		MIRNA	ShortStack
ccm-MIR12472_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold157:653244-653536	-	2,502	30.44	UUGGCAAGUAAUUUUGAGGAU		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-27127	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold16:196145-196287	-	37,629	457.74	UCGGACCAGGCUUCAUUCCCC	miR166	MIRNA	ShortStack
ccm-b0.32r1-100415	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold161a:621242-621432	-	1,960	23.84	AGCUGCCCCAAGAAUUUCAUA		MIRNA	ShortStack
ccm-b0.32r1-101423	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold165:421833-422001	+	2,608	31.73	UACUCAGGCGCGGCGUAGCCAUU		MIRNA	ShortStack
ccm-MIR12495_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold165:421858-422015	+	2,607	31.71	UACUCAGGCGCGGCGUAGCCAUU		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-101426	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold165:425726-425975	+	4,582	55.74	UACUCAGGCGCGGCGUAGCCAUU		MIRNA	ShortStack
ccm-MIR12495_m2	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold165:425827-425984	+	4,578	55.69	UACUCAGGCGCGGCGUAGCCAUU		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-102661	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold170:605066-605209	+	146	1.78	CAACUAGGAGCUCUGCUGCAUUU		MIRNA	ShortStack
ccm-b0.32r1-102673	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold170:634907-635168	-	312	3.80	CCUGCCCUGAAUCAAUUGAAU		MIRNA	ShortStack
ccm-b0.32r1-104218	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold177:706875-707039	+	336	4.09	GAAAACAUAUUGUUGCUCGAC		MIRNA	ShortStack
ccm-MIR12487_m3	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold177:706926-707049	+	335	4.08	GAAAACAUAUUGUUGCUCGAC		MIRNA	Shahid_et_al_2018
ccm-MIR12494b_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold177:940452-940565	+	6,528	79.41	UCCAUAUGUAUUGAGCUGUCUC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-104759	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold180:75274-75368	+	86	1.05	GAUGGGACUGGUGUAUAUAAAC		MIRNA	ShortStack
ccm-b0.32r1-106516	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold188a:452551-452742	+	161	1.96	AAGCUCAGGAGGGAUAGCGCC	miR390	MIRNA	ShortStack
ccm-b0.32r1-106964	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold190a:485257-485352	+	271	3.30	AGGACAGCAUUUGAGAGGAUU		MIRNA	ShortStack
ccm-b0.32r1-107209	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold191:250330-250481	+	54,345	661.08	AGGAAACAUAUUGUGGCUCGGC		MIRNA	ShortStack
ccm-MIR12487_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold191:250352-250481	+	54,344	661.07	AGGAAACAUAUUGUGGCUCGGC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-107303	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold191:522925-523076	+	3,767	45.82	UGACUGAGAAGUUGAGUGCUA		MIRNA	ShortStack
ccm-MIR12473_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold191:522963-523063	+	3,766	45.81	UGACUGAGAAGUUGAGUGCUA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-108191	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold196a:558327-558452	-	5,206	63.33	UAGAGCGGAAAGGAUCGUCCAC		MIRNA	ShortStack
ccm-MIR12488_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold196a:558342-558442	-	5,206	63.33	UAGAGCGGAAAGGAUCGUCCAC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-112504	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold220:1022453-1022572	+	98	1.19	UUCCUGUGUACUGUAUUUCUUC		MIRNA	ShortStack
ccm-b0.32r1-114884	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold236:257574-257764	-	7,820	95.13	CCGGACCAGGCUUCAUUCCUC	miR166	MIRNA	ShortStack
ccm-b0.32r1-34699	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold24:696869-697144	+	668	8.13	AAGCUCAGGAGGGAUAGCGCC	miR390	MIRNA	ShortStack
ccm-b0.32r1-35120	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold24:1949750-1949962	-	1,753	21.32	UCUCUGUGUACUGUAUUUCUU		MIRNA	ShortStack
ccm-MIR12478_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold24:1949858-1949969	-	1,750	21.29	UCUCUGUGUACUGUAUUUCUU		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-115448	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold240:165680-165920	-	6,040	73.47	GUGAAACUUGGGGGUCUCGUG		MIRNA	ShortStack
ccm-MIR12489_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold240:165749-165920	-	6,037	73.44	GUGAAACUUGGGGGUCUCGUG		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-115607	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold241:126758-126962	+	381	4.64	AAAUAGUAGCAGUUCUGAAUU		MIRNA	ShortStack
ccm-b0.32r1-116883	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold249:629590-629717	-	62	0.75	UAGAAUAACACCAACUUUGACAGC		MIRNA	ShortStack
ccm-b0.32r1-35727	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold25:1445785-1445998	-	186	2.26	GCAGAAUGUAAUGCUUUAGAU		MIRNA	ShortStack
ccm-b0.32r1-117811	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold259:55893-56008	-	1,611	19.60	UCUGUCCUCUUCGCCGUUCAUC		MIRNA	ShortStack
ccm-b0.32r1-117827	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold259:168212-168328	+	1,617	19.67	UCUGUCCUCUUCGCCGUUCAUC		MIRNA	ShortStack
ccm-MIR12479_m3	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold26:2523660-2523809	-	2,603	31.66	GGAGAUUGUACAAAGAGAUACU		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-36897	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold26:2523683-2523888	-	2,604	31.68	GGAGAUUGUACAAAGAGAUACU		MIRNA	ShortStack
ccm-b0.32r1-118803	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold266:150960-151096	+	99	1.20	GCGUAUGAGGAGCCAAGCAUA	miR160	MIRNA	ShortStack
ccm-b0.32r1-38777	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold29:1201807-1202027	+	18,494	224.97	UCCAAAGGGAUCGCAUUGCUC	miR393	MIRNA	ShortStack
ccm-b0.32r1-38967	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold29:1788729-1789008	-	465	5.66	GUGAACAUCAUCCACUACACG		MIRNA	ShortStack
ccm-b0.32r1-12533	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold3:2379113-2379394	+	183	2.23	UUCAGGGUCCAAUGGAGCACC		MIRNA	ShortStack
ccm-b0.32r1-40171	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold30:2932879-2933086	-	330	4.01	GGUAUGUCGUCUGGCUCGAUU		MIRNA	ShortStack
ccm-b0.32r1-122753	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold308:309745-309877	+	95,671	1,163.79	CAGCUUGAAAUGUAGUAUCCU		MIRNA	ShortStack
ccm-MIR12469a_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold308:309755-309877	+	95,671	1,163.79	CAGCUUGAAAUGUAGUAUCCU		MIRNA	Shahid_et_al_2018
ccm-MIR12464_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold31:129884-130023	+	4,468	54.35	GAUGUUGAGAUUGAAGUGGUG		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-40519	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold31:129884-130086	+	4,469	54.36	GAUGUUGAGAUUGAAGUGGUG		MIRNA	ShortStack
ccm-b0.32r1-40522	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold31:136245-136382	+	4,631	56.33	UGAUGGAAUGAAGAUGCCGAGU		MIRNA	ShortStack
ccm-b0.32r1-40662	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold31:629539-629638	+	4,927	59.94	GCUCACUCUCUAUCUGUCAUC	miR156	MIRNA	ShortStack
ccm-b0.32r1-40666	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold31:645791-645957	+	1,101	13.39	UGACAGAAGAGAGUGAGCAC	miR156	MIRNA	ShortStack
ccm-MIR12467_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold318:82082-82189	+	604	7.35	CAGGAGCUAUGUAUGCAGGGA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-123448	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold318:82082-82220	+	605	7.36	CAGGAGCUAUGUAUGCAGGGA		MIRNA	ShortStack
ccm-b0.32r1-42832	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold33:808910-809104	+	2,936	35.72	AGAAGUGGAAAUCCUUGAGU		MIRNA	ShortStack
ccm-MIR12476b_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold35:1409447-1409643	-	2,124	25.84	GAGAGGUGGUUGGCGAUUCCCC		MIRNA	Shahid_et_al_2018
ccm-MIR12492_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold35:2406878-2407152	+	17,373	211.33	CGUCAUUGGAAUGGGAUUGGAU		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-45156	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold35:3719429-3719705	+	154	1.87	CUACUUCUUCCAUAAUCACUC		MIRNA	ShortStack
ccm-b0.32r1-45658	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold36:925955-926094	+	1,271	15.46	UGAAGCUGCCAGCAUGAUCUU	miR167	MIRNA	ShortStack
ccm-b0.32r1-45813	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold36:1393551-1393660	-	7,149	86.96	UAAGUCGUUCAUGUGCUUCGC		MIRNA	ShortStack
ccm-b0.32r1-126870	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold384:29618-29909	+	227	2.76	UGUUGAUAUGAGAAUGUGAGAUG		MIRNA	ShortStack
ccm-b0.32r1-13195	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold4:448359-448654	+	24,160	293.89	CUGACAGAAGAUAGAGAGCAC	miR156	MIRNA	ShortStack
ccm-b0.32r1-48402	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold40:502351-502439	+	751	9.14	UGUAAAAGCAUUCUGGAUCUA		MIRNA	ShortStack
ccm-MIR12465a_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold41:1115006-1115234	-	2,562	31.17	UUCUUACUAAUAUUAGGGACU		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-128556	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold425:242879-243039	-	11,826	143.86	AAGUGGUGGAAAAGCUCGAGU		MIRNA	ShortStack
ccm-b0.32r1-50472	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold43:406344-406482	+	15,579	189.51	UCGGACCAGGCUUCAUUCCUC	miR166	MIRNA	ShortStack
ccm-b0.32r1-50502	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold43:501159-501379	+	8,803	107.08	UGUCCCGGUGAACAGUUUUCUU		MIRNA	ShortStack
ccm-MIR12479_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold43:501229-501379	+	8,802	107.07	UGUCCCGGUGAACAGUUUUCUU		MIRNA	Shahid_et_al_2018
ccm-MIR164_m2	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold44:569489-569705	-	1,794	21.82	CAUGUGCCCUCUUUCUCCAAC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-52431	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold44:3797182-3797309	-	40,787	496.15	UCGGACCAGGCUUCAUUCCUC	miR166	MIRNA	ShortStack
ccm-b0.32r1-129886	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold473:162846-163003	+	21,960	267.13	UCGGACCAGGCUUCAUUCCCC	miR166	MIRNA	ShortStack
ccm-MIR164_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold48:1350557-1350831	+	16,835	204.79	CAUGUGCCCUGUUUCUCCACC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-14416	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold5:130418-130567	-	2,326	28.30	UGAGGAAUUAUGGAAAGAAGGG		MIRNA	ShortStack
ccm-b0.32r1-130470	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold502:67572-67795	-	233	2.83	UGAAUUGUCUCUGAAGCUGAC		MIRNA	ShortStack
ccm-b0.32r1-59865	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold57:48113-48331	-	783	9.53	CGCCACUUCUUCGUCACUCCC		MIRNA	ShortStack
ccm-MIR12466_m2	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold57:48129-48313	-	783	9.53	CGCCACUUCUUCGUCACUCCC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-60006	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold57:419456-419730	+	48	0.58	AGAUAUUAGUGCGGUUCAAUG	miR171	MIRNA	ShortStack
ccm-b0.32r1-61427	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold59:1824796-1825091	-	245	2.98	CACCGAUAGUGAAUGGUGGCUU		MIRNA	ShortStack
ccm-MIR12490_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold59:1855114-1855263	-	146,150	1,777.84	CACGAAUAAAGAAAGGCGACUU		MIRNA	Shahid_et_al_2018
ccm-MIR12490_m2	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold59:1863187-1863341	-	180	2.19	ACGAAUAAAGAAAGGUGACUC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-16317	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold6:2531900-2532110	+	2,234	27.18	UCUUCUUCCCAUAUUUGCUCUA		MIRNA	ShortStack
ccm-MIR12491_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold6:2531900-2532001	+	2,209	26.87	UCUUCUUCCCAUAUUUGCUCUA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-62277	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold60:1169246-1169358	+	174	2.12	GGAUGAGAAACCUAGGAAGAC		MIRNA	ShortStack
ccm-b0.32r1-64332	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold64:1174404-1174554	-	53	0.65	UGCAUUUACACCUGCACCUAC	miR530	MIRNA	ShortStack
ccm-b0.32r1-134328	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold6469:778-906	+	108	1.31	GGAGUGCAUUAGGGCUGGGCC		MIRNA	ShortStack
ccm-b0.32r1-131916	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold678:7048-7141	-	810	9.85	UUACCUUUUAAUUUGAACCUU		MIRNA	ShortStack
ccm-b0.32r1-131923	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold678:22930-23043	+	755	9.18	UUACCUUUUAAUUUGAACCUU		MIRNA	ShortStack
ccm-MIR12463b_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold7:1040594-1040711	-	27,581	335.51	UUUGCAUAAAUUCGUAGACUAG		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-17036	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold7:1040604-1040751	-	27,583	335.53	UUUGCAUAAAUUCGUAGACUAG		MIRNA	ShortStack
ccm-MIR12463a_m2	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold7:1057146-1057309	-	34	0.41	UUUGCAUAUAUUCAUAUACCA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-17045	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold7:1063181-1063336	-	325	3.95	CAGGAAGAAAGAAAAUGUAGA		MIRNA	ShortStack
ccm-b0.32r1-17113	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold7:1280020-1280148	+	6,590	80.16	UGAUGGAAUGAAGAUGCGGAGUA		MIRNA	ShortStack
ccm-b0.32r1-17253	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold7:1749507-1749620	+	551	6.70	GCUCACUCUCUAUCUGUCAUC	miR156	MIRNA	ShortStack
ccm-b0.32r1-67349	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold72:118623-118768	-	3,029	36.85	UCGGACCAGGCUUCAUUCCCC	miR166	MIRNA	ShortStack
ccm-b0.32r1-70542	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold79:831033-831179	+	1,664	20.24	UCCAAAGGGAUCACAUUGCUCC	miR393	MIRNA	ShortStack
ccm-b0.32r1-72581	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold83:642752-642894	-	221	2.69	UUGAAUGAGUGCUUGAAAGCC		MIRNA	ShortStack
ccm-b0.32r1-74145	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold86:8017-8208	-	75	0.91	AGGGGCUGGUUCCUGUGAGAAUGC		MIRNA	ShortStack
ccm-b0.32r1-75408	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold89c:46892-47145	+	460	5.60	ACAUCGAUGAGAUGAUUCGGC		MIRNA	ShortStack
ccm-MIR12463a_m3	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold9:103147-103310	+	398	4.84	UCUGCAUGUAUUCGUACACCA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-19049	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold9:103185-103307	+	398	4.84	UCUGCAUGUAUUCGUACACCA		MIRNA	ShortStack
ccm-b0.32r1-75890	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold90:436998-437248	+	66	0.80	CCUAAGAAUGAUUUUAUACUC		MIRNA	ShortStack
ccm-MIR12475_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold90:995588-995711	+	1,657	20.16	UUGCUAGAAUAUGAAGAGGUU		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-76058	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold90:995588-995711	+	1,657	20.16	UUGCUAGAAUAUGAAGAGGUU		MIRNA	ShortStack
ccm-MIR12477_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold92b:991770-991920	+	7,405	90.08	CCCGGACACUUUGCAAGGAAA		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-76923	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold92b:991778-992043	+	7,408	90.12	CCCGGACACUUUGCAAGGAAA		MIRNA	ShortStack
ccm-b0.32r1-77568	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold93b:1273972-1274195	-	42	0.51	CAAUUUCACCCUGUCCCCACC		MIRNA	ShortStack
ccm-MIR12482_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold94:850291-850428	+	1,979	24.07	UUAGGACAAACAUUUGAGAGAC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-79993	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold99:341487-341691	-	58	0.71	AGAAAUGUUAGACCAUCUACC		MIRNA	ShortStack
ccm-MIR12465b_m1	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold99:713626-713889	-	11,053	134.45	UCUUGGUGAUGUUUGGGACGAC		MIRNA	Shahid_et_al_2018
ccm-b0.32r1-80119	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold99:713675-713948	-	11,054	134.47	UCUUGGUGAUGUUUGGGACGAC		MIRNA	ShortStack