| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| clt-b1r1-850 | Citrullus lanatus (Watermelon) 1 | Chr0:18569617-18569789 | + | 535 | 3.07 | UAGCGAUUAAGAUGUACAAAG | | MIRNA | ShortStack |
| clt-b1r1-1778 | Citrullus lanatus (Watermelon) 1 | Chr1:1344293-1344494 | + | 141,801 | 812.62 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| clt-b1r1-1995 | Citrullus lanatus (Watermelon) 1 | Chr1:1904191-1904371 | + | 715,109 | 4,098.10 | UUGGACUGAAGGGAGCUCCCU | miR319 | MIRNA | ShortStack |
| clt-b1r1-3716 | Citrullus lanatus (Watermelon) 1 | Chr1:6044712-6044909 | + | 212,041 | 1,215.15 | GGGCAUCGGCGACUUGGAAAC | | MIRNA | ShortStack |
| clt-b1r1-5337 | Citrullus lanatus (Watermelon) 1 | Chr1:10059899-10060040 | - | 116,007 | 664.81 | CAGCCAAGGAUGACUUGCCGG | miR169 | MIRNA | ShortStack |
| clt-b1r1-7668 | Citrullus lanatus (Watermelon) 1 | Chr1:25650870-25651088 | + | 186,512 | 1,068.85 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | ShortStack |
| clt-b1r1-9562 | Citrullus lanatus (Watermelon) 1 | Chr1:32238343-32238409 | + | 351 | 2.01 | UGCCAAAAGAGACUUGCCCUG | | MIRNA | ShortStack |
| clt-b1r1-17918 | Citrullus lanatus (Watermelon) 1 | Chr10:27354896-27354987 | - | 13,340 | 76.45 | UAAUCUGCAUCCUGAGGUUUA | miR2111 | MIRNA | ShortStack |
| clt-b1r1-18168 | Citrullus lanatus (Watermelon) 1 | Chr10:28130980-28131092 | + | 10,663 | 61.11 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | ShortStack |
| clt-b1r1-18795 | Citrullus lanatus (Watermelon) 1 | Chr11:2353088-2353349 | + | 21,553 | 123.51 | UGACAGGAGAUAGAGAGCAC | miR156 | MIRNA | ShortStack |
| clt-b1r1-20192 | Citrullus lanatus (Watermelon) 1 | Chr11:13469209-13469368 | + | 67,761 | 388.32 | AAGCCAAGGAUGAAUUGCCGG | miR169 | MIRNA | ShortStack |
| clt-b1r1-20954 | Citrullus lanatus (Watermelon) 1 | Chr11:15672134-15672247 | + | 17,122 | 98.12 | AUGCACUGCCUCUUCCCUGGC | miR408 | MIRNA | ShortStack |
| clt-b1r1-23964 | Citrullus lanatus (Watermelon) 1 | Chr11:23751548-23751707 | - | 222,245 | 1,273.63 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | ShortStack |
| clt-b1r1-23985 | Citrullus lanatus (Watermelon) 1 | Chr11:23788484-23788680 | - | 3,145 | 18.02 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | ShortStack |
| clt-b1r1-31241 | Citrullus lanatus (Watermelon) 1 | Chr2:24300888-24301124 | - | 717 | 4.11 | UAGCCAAAAAUGACUUGCCUGC | miR169 | MIRNA | ShortStack |
| clt-b1r1-31242 | Citrullus lanatus (Watermelon) 1 | Chr2:24301244-24301371 | - | 1,134 | 6.50 | UGAGCUAAAGAUGACUUGCCU | miR169 | MIRNA | ShortStack |
| clt-b1r1-33482 | Citrullus lanatus (Watermelon) 1 | Chr2:29787689-29787847 | - | 466 | 2.67 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | ShortStack |
| clt-b1r1-34225 | Citrullus lanatus (Watermelon) 1 | Chr2:31618323-31618462 | - | 10,392 | 59.55 | GUAGCAUUAUCAAGAUUCACA | miR172 | MIRNA | ShortStack |
| clt-b1r1-34255 | Citrullus lanatus (Watermelon) 1 | Chr2:31685332-31685468 | + | 6,573 | 37.67 | UGCAUUUGCACCUACACCUUC | miR530 | MIRNA | ShortStack |
| clt-b1r1-34729 | Citrullus lanatus (Watermelon) 1 | Chr2:33044831-33044950 | - | 378 | 2.17 | UGACAUGGCACCAUGUGGAAG | | MIRNA | ShortStack |
| clt-b1r1-34853 | Citrullus lanatus (Watermelon) 1 | Chr2:33421980-33422121 | + | 4,136 | 23.70 | UGGUCCUGUUGGCUUGAUUAGA | | MIRNA | ShortStack |
| clt-b1r1-35237 | Citrullus lanatus (Watermelon) 1 | Chr3:368983-369251 | - | 3,482 | 19.95 | CGCUAUCUAUCCUGAGUUUCA | miR390 | MIRNA | ShortStack |
| clt-b1r1-37396 | Citrullus lanatus (Watermelon) 1 | Chr3:5361586-5361666 | + | 444 | 2.54 | UCAUUGAGUGCAGCGUUGAUG | miR397 | MIRNA | ShortStack |
| clt-b1r1-40267 | Citrullus lanatus (Watermelon) 1 | Chr3:21159854-21159994 | + | 1,262 | 7.23 | CUGAAACUCUUCCAUUAUGUU | | MIRNA | ShortStack |
| clt-b1r1-42504 | Citrullus lanatus (Watermelon) 1 | Chr3:28186409-28186486 | - | 1,276 | 7.31 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | ShortStack |
| clt-b1r1-45188 | Citrullus lanatus (Watermelon) 1 | Chr4:18286234-18286429 | - | 29,173 | 167.18 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | ShortStack |
| clt-b1r1-46887 | Citrullus lanatus (Watermelon) 1 | Chr4:22369682-22369892 | - | 2,327,145 | 13,336.24 | UUUGGAUUGAAGGGAGCUCUA | miR159 | MIRNA | ShortStack |
| clt-b1r1-47627 | Citrullus lanatus (Watermelon) 1 | Chr5:592649-592836 | - | 36,748 | 210.59 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| clt-b1r1-48706 | Citrullus lanatus (Watermelon) 1 | Chr5:4155874-4156158 | + | 105,552 | 604.89 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| clt-b1r1-48801 | Citrullus lanatus (Watermelon) 1 | Chr5:4429356-4429457 | - | 49,302 | 282.54 | UGAAGCUGCCAGCAUGAUCUU | miR167 | MIRNA | ShortStack |
| clt-b1r1-49967 | Citrullus lanatus (Watermelon) 1 | Chr5:7623648-7623750 | - | 176 | 1.01 | UGUUGGUUUGGAAUGACUUUC | | MIRNA | ShortStack |
| clt-b1r1-50280 | Citrullus lanatus (Watermelon) 1 | Chr5:8304320-8304528 | - | 70,482 | 403.91 | UCCAAAGGGAUCGCAUUGAUCC | miR393 | MIRNA | ShortStack |
| clt-b1r1-50535 | Citrullus lanatus (Watermelon) 1 | Chr5:8942641-8942741 | - | 206 | 1.18 | UUGAAAUCAACUCUCAUCUUC | | MIRNA | ShortStack |
| clt-b1r1-52739 | Citrullus lanatus (Watermelon) 1 | Chr5:22997303-22997512 | + | 81,542 | 467.30 | UAUUGGCCCGGUUCACUCAGA | miR171 | MIRNA | ShortStack |
| clt-b1r1-53169 | Citrullus lanatus (Watermelon) 1 | Chr5:24385370-24385480 | - | 125,931 | 721.68 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| clt-b1r1-53840 | Citrullus lanatus (Watermelon) 1 | Chr5:26118470-26118557 | + | 396 | 2.27 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| clt-b1r1-54765 | Citrullus lanatus (Watermelon) 1 | Chr5:28604942-28605028 | - | 12,076 | 69.20 | UGCCUGGCUCCCUGUAUGCCA | miR160 | MIRNA | ShortStack |
| clt-b1r1-55834 | Citrullus lanatus (Watermelon) 1 | Chr5:31573117-31573216 | - | 457 | 2.62 | UGAAGUGUUUGGGGGAACUCU | miR395 | MIRNA | ShortStack |
| clt-b1r1-56321 | Citrullus lanatus (Watermelon) 1 | Chr5:33031748-33031961 | - | 935 | 5.36 | UCAUGUCUAUCGCGAUCUUCA | | MIRNA | ShortStack |
| clt-b1r1-59337 | Citrullus lanatus (Watermelon) 1 | Chr6:7099723-7099821 | + | 11,901 | 68.20 | UCAAGCUGCCAGCAUGAUCUAA | miR167 | MIRNA | ShortStack |
| clt-b1r1-60873 | Citrullus lanatus (Watermelon) 1 | Chr6:15915476-15915631 | - | 7,222 | 41.39 | UUUGUUGUUGGUCAUCUCACC | | MIRNA | ShortStack |
| clt-b1r1-61494 | Citrullus lanatus (Watermelon) 1 | Chr6:20242376-20242471 | + | 1,061 | 6.08 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | ShortStack |
| clt-b1r1-61514 | Citrullus lanatus (Watermelon) 1 | Chr6:20299997-20300170 | - | 408,780 | 2,342.61 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | ShortStack |
| clt-b1r1-61951 | Citrullus lanatus (Watermelon) 1 | Chr6:21358198-21358406 | + | 23,597 | 135.23 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| clt-b1r1-62552 | Citrullus lanatus (Watermelon) 1 | Chr6:22794173-22794267 | + | 1,941 | 11.12 | UGAGCCAAGGAUGACUUGCCU | miR169 | MIRNA | ShortStack |
| clt-b1r1-62916 | Citrullus lanatus (Watermelon) 1 | Chr6:23743624-23743801 | + | 228,242 | 1,307.99 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | ShortStack |
| clt-b1r1-63137 | Citrullus lanatus (Watermelon) 1 | Chr6:24289055-24289183 | + | 12,872 | 73.77 | UCGAUAAACCUCUGCAUCCAG | miR162 | MIRNA | ShortStack |
| clt-b1r1-63847 | Citrullus lanatus (Watermelon) 1 | Chr6:26686617-26686708 | + | 1,720 | 9.86 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | ShortStack |
| clt-b1r1-64914 | Citrullus lanatus (Watermelon) 1 | Chr7:2293247-2293508 | + | 1,142,161 | 6,545.42 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| clt-b1r1-65001 | Citrullus lanatus (Watermelon) 1 | Chr7:2479790-2479873 | - | 57,620 | 330.21 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | ShortStack |
| clt-b1r1-65403 | Citrullus lanatus (Watermelon) 1 | Chr7:3545442-3545568 | - | 1,125 | 6.45 | UGGGAAUCUUGAUGAUGCUGC | miR172 | MIRNA | ShortStack |
| clt-b1r1-65659 | Citrullus lanatus (Watermelon) 1 | Chr7:4116875-4117045 | + | 66,518 | 381.20 | UCCAAAGGGAUCGCAUUGAUCC | miR393 | MIRNA | ShortStack |
| clt-b1r1-70852 | Citrullus lanatus (Watermelon) 1 | Chr7:29707039-29707143 | - | 24,754 | 141.86 | CUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | ShortStack |
| clt-b1r1-71412 | Citrullus lanatus (Watermelon) 1 | Chr7:31136238-31136319 | - | 1,935 | 11.09 | UUCUCUCCCUCAAGGGCUUCGC | | MIRNA | ShortStack |
| clt-b1r1-71942 | Citrullus lanatus (Watermelon) 1 | Chr8:1935618-1935706 | - | 2,659 | 15.24 | UUCUCUCCCUCAAGGGCUUCUGG | miR477 | MIRNA | ShortStack |
| clt-b1r1-74169 | Citrullus lanatus (Watermelon) 1 | Chr8:16744105-16744193 | + | 9,118 | 52.25 | UGCCUGGCUCCCUGUAUGCCA | miR160 | MIRNA | ShortStack |
| clt-b1r1-74280 | Citrullus lanatus (Watermelon) 1 | Chr8:16995569-16995715 | - | 58,286 | 334.02 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | ShortStack |
| clt-b1r1-76393 | Citrullus lanatus (Watermelon) 1 | Chr8:22931707-22931796 | + | 41,755 | 239.29 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| clt-b1r1-76468 | Citrullus lanatus (Watermelon) 1 | Chr8:23175594-23175817 | - | 15,471 | 88.66 | AGCUCUGUUUGGAUCCUCUUUG | | MIRNA | ShortStack |
| clt-b1r1-76484 | Citrullus lanatus (Watermelon) 1 | Chr8:23212071-23212323 | + | 47,933 | 274.69 | UAUUGGUCCGGUUCACUCAGA | miR171 | MIRNA | ShortStack |
| clt-b1r1-78826 | Citrullus lanatus (Watermelon) 1 | Chr9:4409098-4409224 | - | 1,191 | 6.83 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | ShortStack |
| clt-b1r1-79410 | Citrullus lanatus (Watermelon) 1 | Chr9:6108790-6108890 | - | 265,518 | 1,521.61 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | ShortStack |
| clt-b1r1-81261 | Citrullus lanatus (Watermelon) 1 | Chr9:11102631-11102739 | - | 471 | 2.70 | UCAGUUUGGAUUGACUUUUUA | | MIRNA | ShortStack |
| clt-b1r1-84285 | Citrullus lanatus (Watermelon) 1 | Chr9:30725394-30725456 | - | 827 | 4.74 | UGCAGUAGAAAUGACAUCGUCU | | MIRNA | ShortStack |
| clt-b1r1-85168 | Citrullus lanatus (Watermelon) 1 | Chr9:32742248-32742367 | - | 277 | 1.59 | GUUCCCUUCCAAGCACUUCAGA | miR395 | MIRNA | ShortStack |
Data from Lunardon et al. (2020)