het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Olea europaea (Olive Tree) genome build 6 (oeu-b6)

Version v6 of Olea europaea cv. Farga from The de novo Genome Assembly and Annotation Team

Locus type


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Annotation source

Name contains:

Family contains:

NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
oeu-b6r1-90Olea europaea (Olive Tree) 6Oe6_s00003:429517-429594+14,620158.99GUCUGGGUGGUGUAGUUGGUsiRNA20ShortStack
oeu-b6r1-724Olea europaea (Olive Tree) 6Oe6_s00013:25973-26068+2732.97GAAGACAAGGAGGACCGGUUsiRNA20ShortStack
oeu-b6r1-5553Olea europaea (Olive Tree) 6Oe6_s00209:38461-39100-3,32536.16AGGGAUAUAACUCAGCGGUAsiRNA20ShortStack
oeu-b6r1-8870Olea europaea (Olive Tree) 6Oe6_s01923:1080598-1080730+1,51016.42AGAAGAGAGGAUGAGAGACAsiRNA20ShortStack
oeu-b6r1-10169Olea europaea (Olive Tree) 6Oe6_s01957:441111-441234-129,2521,405.58GGCGGAUGUAGCCAAGUGGAsiRNA20ShortStack
oeu-b6r1-10681Olea europaea (Olive Tree) 6Oe6_s01970:185393-185702-4274.64CUGAGAUAUGGAAUUGGACAsiRNA20ShortStack
oeu-b6r1-17453Olea europaea (Olive Tree) 6Oe6_s03630:760-862-2682.91UUGCCACUGGGAGAUAUGCAsiRNA20ShortStack
oeu-b6r1-20052Olea europaea (Olive Tree) 6Oe6_s03914:292232-292258+8869.64GUCUGGGUGGUGUAGUUGGUsiRNA20ShortStack
oeu-b6r1-20453Olea europaea (Olive Tree) 6Oe6_s03930:570920-570953-5726.22UGGGGCGUGGCCAAGUGGUAsiRNA20ShortStack
oeu-b6r1-21492Olea europaea (Olive Tree) 6Oe6_s03985:226719-226741+1241.35AAACCGGCUGUUAGAGUGCAAsiRNA20ShortStack
oeu-b6r1-22639Olea europaea (Olive Tree) 6Oe6_s04052:87765-87883+3353.64AGGGAUGGAAGGGCAGAGGsiRNA20ShortStack
oeu-b6r1-23641Olea europaea (Olive Tree) 6Oe6_s04139:237054-237341-1,14112.41AGGAGUAUAAAGGCUGUUCAsiRNA20ShortStack
oeu-b6r1-28762Olea europaea (Olive Tree) 6Oe6_s05832:642802-642846-4544.94UGACAGAAGAGAGAGAGCACmiR156siRNA20ShortStack
oeu-b6r1-35181Olea europaea (Olive Tree) 6Oe6_s07693:582801-582848-1,08811.83AGGGAUAUAACUCAGCGGUAsiRNA20ShortStack
oeu-b6r1-35779Olea europaea (Olive Tree) 6Oe6_s07709:1084-1141-3093.36GUGUAGCAGGGUUGAAGAUAsiRNA20ShortStack
oeu-b6r1-40169Olea europaea (Olive Tree) 6Oe6_s07888:174244-174329-12,823139.45UGACAGAAGAGAGUGAGCACmiR156siRNA20ShortStack
oeu-b6r1-41316Olea europaea (Olive Tree) 6Oe6_s07974:136197-136216-4074.43UGACAGAAGAGAGCGAGCACmiR156siRNA20ShortStack
oeu-b6r1-43060Olea europaea (Olive Tree) 6Oe6_s08209:95350-95413-1,45415.81GGGGAUGUAGCUCAGAUGGUsiRNA20ShortStack
oeu-b6r1-43414Olea europaea (Olive Tree) 6Oe6_s08310:37300-37406-2602.83GAAGACAAGGAGGACCGGUAsiRNA20ShortStack
oeu-b6r1-50688Olea europaea (Olive Tree) 6Oe6_s09936:149616-149679+6176.71UGACAGAAGAGAGAGAGCACmiR156siRNA20ShortStack
oeu-b6r1-51741Olea europaea (Olive Tree) 6Oe6_s10070:81376-81567.3163.44UGAGAGGGGUGUAAUGCAUUsiRNA20ShortStack
oeu-b6r1-51820Olea europaea (Olive Tree) 6Oe6_s10086:115091-115167-4,48848.81GACCGCAUAGCGCAGUGGAUsiRNA20ShortStack
oeu-b6r1-52033Olea europaea (Olive Tree) 6Oe6_s10156:92669-92751+7,06776.85UGACAGAAGAGAGUGAGCAUmiR156siRNA20ShortStack