Data from Lunardon et al. (2020)

Annotations viewer

Genome

Hevea brasiliensis (Rubber Tree) genome build 0 (hbr-b0)

Version v0 of Hevea brasiliensis cv. Reyan7-33-97 from NCBI

Locus type

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Annotation source

Name contains:

Family contains:

Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
hbr-b0r1-211	Hevea brasiliensis (Rubber Tree) 0	scaffold0012:1212157-1212230	-	3,868	29.12	CACGUCUGCCUGGGUGUCACGC		siRNA22	ShortStack
hbr-b0r1-311	Hevea brasiliensis (Rubber Tree) 0	scaffold0017:3562599-3562854	-	1,785	13.44	AUCGAAUGACUAUUCAUCUAUU		siRNA22	ShortStack
hbr-b0r1-390	Hevea brasiliensis (Rubber Tree) 0	scaffold0025:2203107-2203231	.	536	4.04	UAGUGAUGAAGAUGGCGGAUUA		siRNA22	ShortStack
hbr-b0r1-912	Hevea brasiliensis (Rubber Tree) 0	scaffold0065:716682-716750	+	8,362	62.95	GUUCCCAUGCCACCCAUUUCUA	miR2118	siRNA22	ShortStack
hbr-b0r1-2172	Hevea brasiliensis (Rubber Tree) 0	scaffold0262:200300-200804	-	48,762	367.06	UUUUCCCGAGACCUCCCAUACC	miR482	siRNA22	ShortStack
hbr-b0r1-2206	Hevea brasiliensis (Rubber Tree) 0	scaffold0266:101895-101960	-	641	4.83	UUGUCGCAGGAGCGGUGGCACC	miR3627	siRNA22	ShortStack
hbr-b0r1-2869	Hevea brasiliensis (Rubber Tree) 0	scaffold0400:133482-133810	-	6,025	45.35	GGGGAUAUAGCUCAGUUGGUAG		siRNA22	ShortStack
hbr-b0r1-2998	Hevea brasiliensis (Rubber Tree) 0	scaffold0404:579976-580429	-	2,042	15.37	AUCGAAUGACUAUUCAUCUAUU		siRNA22	ShortStack
hbr-b0r1-3408	Hevea brasiliensis (Rubber Tree) 0	scaffold0494:68254-68370	-	4,755	35.79	CGUGAUAUUGGUACGGCUCAUC	miR171	siRNA22	ShortStack
hbr-b0r1-3851	Hevea brasiliensis (Rubber Tree) 0	scaffold0618:569237-569544	-	4,181	31.47	UUCAUAGUAGACAAAGAAGGAU		siRNA22	ShortStack
hbr-b0r1-3866	Hevea brasiliensis (Rubber Tree) 0	scaffold0621:197431-197760	+	6,169	46.44	GGGGAUAUAGCUCAGUUGGUAG		siRNA22	ShortStack
hbr-b0r1-4493	Hevea brasiliensis (Rubber Tree) 0	scaffold0811:415540-415648	-	270	2.03	GAAGGCUGCAGGGGAAGUGAUU		siRNA22	ShortStack
hbr-b0r1-5119	Hevea brasiliensis (Rubber Tree) 0	scaffold1040:142637-143213	-	21,002	158.09	UCUUACCUACACCGCCCAUGCC	miR482	siRNA22	ShortStack
hbr-b0r1-5253	Hevea brasiliensis (Rubber Tree) 0	scaffold1106:2763-3285	.	302	2.27	CUUGCUCGUCUGUGACAACCU		siRNA22	ShortStack
hbr-b0r1-5363	Hevea brasiliensis (Rubber Tree) 0	scaffold1150:34462-34899	-	15,584	117.31	UCUUCCCUACUCCACCCAUGCC	miR482	siRNA22	ShortStack
hbr-b0r1-5795	Hevea brasiliensis (Rubber Tree) 0	scaffold1566:33785-34251	+	267,245	2,011.70	AGAUGGGUGGCUGGGCAAGAAG	miR482	siRNA22	ShortStack
hbr-b0r1-6403	Hevea brasiliensis (Rubber Tree) 0	scaffold3886:8841-8955	+	4,752	35.77	CGUGAUAUUGGUACGGCUCAUC	miR171	siRNA22	ShortStack