Data from Lunardon et al. (2020)

Annotations viewer

Genome

Hevea brasiliensis (Rubber Tree) genome build 0 (hbr-b0)

Version v0 of Hevea brasiliensis cv. Reyan7-33-97 from NCBI

Locus type

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Annotation source

Name contains:

Family contains:

Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
hbr-b0r1-342	Hevea brasiliensis (Rubber Tree) 0	scaffold0018:622002-622176	+	1,851	13.93	UUGGACUGAAGGGAGCUCCC	miR319	siRNA20	ShortStack
hbr-b0r1-792	Hevea brasiliensis (Rubber Tree) 0	scaffold0056:2268634-2268805	+	13,804	103.91	UGCACUGCCUCUUCCCUGGC	miR408	siRNA20	ShortStack
hbr-b0r1-1182	Hevea brasiliensis (Rubber Tree) 0	scaffold0100:347317-347351	-	346	2.61	AUAGAUGAGAACAUGAAUUU		siRNA20	ShortStack
hbr-b0r1-1971	Hevea brasiliensis (Rubber Tree) 0	scaffold0214:972363-972459	+	2,953	22.23	UGCACUGCCUCUUCCCUGGC	miR408	siRNA20	ShortStack
hbr-b0r1-3352	Hevea brasiliensis (Rubber Tree) 0	scaffold0481:258185-258519	-	2,987	22.49	ACUCAAAUCCAUUGUCGAAC		siRNA20	ShortStack
hbr-b0r1-3353	Hevea brasiliensis (Rubber Tree) 0	scaffold0481:259075-259103	-	2,275	17.13	ACUCAAAUCCAUUGUCGAAC		siRNA20	ShortStack
hbr-MIR6170-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold0665:424036-424092	-	16	0.12	UUUUCUUUCUGUUUCUUGGA	miR6170	siRNA20	miRBase21-BestBlastHit
hbr-b0r1-4985	Hevea brasiliensis (Rubber Tree) 0	scaffold0977:313415-313435	+	895	6.74	UUGAACAUGAACUUAAAAUU		siRNA20	ShortStack
hbr-b0r1-5477	Hevea brasiliensis (Rubber Tree) 0	scaffold1229:72036-72060	-	56,658	426.50	UUGGACUGAAGGGAGCUCCC	miR319	siRNA20	ShortStack
hbr-b0r1-6024	Hevea brasiliensis (Rubber Tree) 0	scaffold1903:46418-46539	-	6,479	48.77	UGACAGAAGAGAGUGAGCAC	miR156	siRNA20	ShortStack