het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Theobroma cacao (Cacao) genome build 1.1 (tcc-b1.1)

Version v1.1 of Theobroma cacao cv. Matina 1-6 from Cacao Genome Database

Locus type


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Annotation source

Name contains:

Family contains:

NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
tcc-MIR399f-m1Theobroma cacao (Cacao) 1.1scaffold_1:9349938-935004800.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR399g-m1Theobroma cacao (Cacao) 1.1scaffold_1:9353757-935386800.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR399h-m1Theobroma cacao (Cacao) 1.1scaffold_1:9356233-935634900.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR172a-m1Theobroma cacao (Cacao) 1.1scaffold_10r:1900831-190098400.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR171a-m1Theobroma cacao (Cacao) 1.1scaffold_3:7376825-737694300.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR169b-m1Theobroma cacao (Cacao) 1.1scaffold_4:16636798-1663699000.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR156e-m1Theobroma cacao (Cacao) 1.1scaffold_4:21987408-2198753000.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR169c-m1Theobroma cacao (Cacao) 1.1scaffold_5:36120234-3612037500.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR171b-m1Theobroma cacao (Cacao) 1.1scaffold_6:2319746-231986700.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR169e-m1Theobroma cacao (Cacao) 1.1scaffold_6:2725865-272601100.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR399b-m1Theobroma cacao (Cacao) 1.1scaffold_6:23703942-2370407600.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR397-m1Theobroma cacao (Cacao) 1.1scaffold_6:25407930-2540805200.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR156a-m1Theobroma cacao (Cacao) 1.1scaffold_7:621194-62131700.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR156g-m1Theobroma cacao (Cacao) 1.1scaffold_9:851020-85113900.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR156b-m1Theobroma cacao (Cacao) 1.1scaffold_9:2892913-289304100.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR156d-m1Theobroma cacao (Cacao) 1.1scaffold_9:4456679-445680300.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR169m-m1Theobroma cacao (Cacao) 1.1scaffold_9:18860726-1886085000.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR169f-m1Theobroma cacao (Cacao) 1.1scaffold_9:35685897-3568603700.00NotExpressedmiRBase21-BestBlastHit
tcc-MIR169h-m1Theobroma cacao (Cacao) 1.1scaffold_9:35699180-3569931400.00NotExpressedmiRBase21-BestBlastHit