| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| gba-b1.0r1-146 | Gossypium barbadense (Pima Cotton) 1.0 | At01:77181290-77181317 | - | 129 | 0.28 | GGCUUCCUCGAUCGUCCACGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-433 | Gossypium barbadense (Pima Cotton) 1.0 | At03:2457291-2457327 | + | 453 | 0.99 | UUAACCCUAGGCUCGUAAAAUAAU | | siRNA22 | ShortStack |
| gba-MIRC22c-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At03:20974126-20974280 | . | 2 | 0.00 | AAGGAAUUCAUAGAAGGCGACU | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-554 | Gossypium barbadense (Pima Cotton) 1.0 | At03:89212459-89212488 | + | 401 | 0.88 | UUCUGUGGGAGUGGGCACGUUACU | | siRNA22 | ShortStack |
| gba-MIR169l-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At03:93404015-93404185 | + | 1 | 0.00 | AGUCCCUGUAUUGUAGCCAAGG | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-640 | Gossypium barbadense (Pima Cotton) 1.0 | At04:483896-484325 | + | 6,025 | 13.23 | CAGACAUGGACGGAGACAUUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-641 | Gossypium barbadense (Pima Cotton) 1.0 | At04:484516-484763 | + | 3,851 | 8.45 | UUUACGUGGAUUUGGGCAGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-642 | Gossypium barbadense (Pima Cotton) 1.0 | At04:485147-485244 | + | 578 | 1.27 | CUUGAUUAAGGUUGUUAGAGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-644 | Gossypium barbadense (Pima Cotton) 1.0 | At04:486108-486300 | + | 654 | 1.44 | UUCAUGCCGGAGGUCAAACAAC | | siRNA22 | ShortStack |
| gba-b1.0r1-646 | Gossypium barbadense (Pima Cotton) 1.0 | At04:487246-487527 | + | 1,061 | 2.33 | UCUGUGGAAGAACUAUACUUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-658 | Gossypium barbadense (Pima Cotton) 1.0 | At04:1040926-1041286 | - | 816 | 1.79 | UAGAGGUAAUGUUAGACGGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-721 | Gossypium barbadense (Pima Cotton) 1.0 | At04:35421669-35421709 | . | 356 | 0.78 | UCUGUCAGAGGCAGACCACUG | | siRNA22 | ShortStack |
| gba-b1.0r1-787 | Gossypium barbadense (Pima Cotton) 1.0 | At04:63128177-63128201 | + | 1,638 | 3.60 | UAAGAUCAGUACGAAGCCUCGG | | siRNA22 | ShortStack |
| gba-MIR156o-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At05:3323495-3323597 | . | 80 | 0.18 | GCUCACUUCUCUUUUUGUCAGUU | miR156 | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-973 | Gossypium barbadense (Pima Cotton) 1.0 | At05:20000545-20000607 | - | 67,362 | 147.88 | UCGGGAAAGUAGACUUGGUGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-974 | Gossypium barbadense (Pima Cotton) 1.0 | At05:20001150-20001190 | - | 2,849 | 6.25 | AAGUUCGAAGAAUCUGCUGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-979 | Gossypium barbadense (Pima Cotton) 1.0 | At05:20006831-20007191 | - | 6,041 | 13.26 | UCUUUCUGAUUCUCUGAUAGACU | | siRNA22 | ShortStack |
| gba-b1.0r1-982 | Gossypium barbadense (Pima Cotton) 1.0 | At05:20009311-20009343 | - | 469 | 1.03 | CUCGGUGUUGACCUUUUAGUACU | | siRNA22 | ShortStack |
| gba-b1.0r1-984 | Gossypium barbadense (Pima Cotton) 1.0 | At05:20009973-20010087 | - | 505 | 1.11 | CUAGGAAGUCCAAAUCGUAUGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-985 | Gossypium barbadense (Pima Cotton) 1.0 | At05:20010342-20010567 | - | 1,914 | 4.20 | GCCAUAGGUUCUUAGUCGACUU | | siRNA22 | ShortStack |
| gba-b1.0r1-986 | Gossypium barbadense (Pima Cotton) 1.0 | At05:20010705-20010879 | . | 1,285 | 2.82 | UCUGGAAAAGCUCUAAAAACCU | | siRNA22 | ShortStack |
| gba-MIRC146u-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At05:73892249-73892369 | - | 1 | 0.00 | AUACCGGCGAUCUACACCUUCA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-1175 | Gossypium barbadense (Pima Cotton) 1.0 | At05:88943316-88943568 | - | 2,380 | 5.23 | UCUGAAUAGAACGAUGAUGAUG | | siRNA22 | ShortStack |
| gba-b1.0r1-1176 | Gossypium barbadense (Pima Cotton) 1.0 | At05:88943913-88944022 | - | 374 | 0.82 | UGUAUUACGGAUAGCAGUGCCA | | siRNA22 | ShortStack |
| gba-b1.0r1-1177 | Gossypium barbadense (Pima Cotton) 1.0 | At05:88944416-88944481 | - | 346 | 0.76 | UCUAAUGCAGAUGAUGACAAAC | | siRNA22 | ShortStack |
| gba-b1.0r1-1178 | Gossypium barbadense (Pima Cotton) 1.0 | At05:88945179-88945484 | . | 4,014 | 8.81 | CAUGGUGAGUUAGAAGAGGAGU | | siRNA22 | ShortStack |
| gba-b1.0r1-1179 | Gossypium barbadense (Pima Cotton) 1.0 | At05:88946794-88947036 | - | 1,750 | 3.84 | UACCCCGUAGUUGAAUGACGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-1181 | Gossypium barbadense (Pima Cotton) 1.0 | At05:88948437-88948658 | - | 9,334 | 20.49 | CGAGAGCGCAUUUGUAGGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-1183 | Gossypium barbadense (Pima Cotton) 1.0 | At05:88950137-88950248 | - | 3,747 | 8.23 | UGUGUAUUUGAAGAAGCUGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-1196 | Gossypium barbadense (Pima Cotton) 1.0 | At05:90498852-90498889 | - | 446 | 0.98 | CUGAUUUUGAGAAGUGUGAUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-1216 | Gossypium barbadense (Pima Cotton) 1.0 | At05:93224072-93224111 | + | 642 | 1.41 | UCUAGCAUGUGGAAUAAAUCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-1253 | Gossypium barbadense (Pima Cotton) 1.0 | At06:2003948-2004039 | - | 691 | 1.52 | UAAAUUUGAUUGUUGUUACCAC | | siRNA22 | ShortStack |
| gba-b1.0r1-1334 | Gossypium barbadense (Pima Cotton) 1.0 | At06:12775372-12775445 | + | 377 | 0.83 | CUUUCCGCUACAAAUUGGUACC | | siRNA22 | ShortStack |
| gba-b1.0r1-1361 | Gossypium barbadense (Pima Cotton) 1.0 | At06:57483548-57483606 | + | 965 | 2.12 | AUGGAGAAGAAAUCGUCAGGGG | | siRNA22 | ShortStack |
| gba-MIR170c-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At06:90063266-90063362 | - | 2 | 0.00 | AUUGGUGCGGUUCAAUUUAAGA | | siRNA22 | Hu_et_al_2015 |
| gba-MIR170n-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At06:90063266-90063362 | - | 2 | 0.00 | AUUGGUGCGGUUCAAUUUAAGAGC | | siRNA22 | Hu_et_al_2015 |
| gba-MIRC141a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At06:96455021-96455140 | - | 2 | 0.00 | UGGACUCAUAAGUCAGCAAAGUUG | | siRNA22 | Hu_et_al_2015 |
| gba-MIRC141b-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At06:96455021-96455140 | - | 2 | 0.00 | UGGACUCAUAAGUCAGCAAAGUUG | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-1576 | Gossypium barbadense (Pima Cotton) 1.0 | At07:9835825-9835849 | + | 349 | 0.77 | GGUAUAAAUUGUCUUGAUCUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-1714 | Gossypium barbadense (Pima Cotton) 1.0 | At07:82118264-82118425 | + | 652 | 1.43 | UCAGGAGCAGGGACAAUGUCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-1716 | Gossypium barbadense (Pima Cotton) 1.0 | At07:82121320-82121539 | + | 350 | 0.77 | UCAGAUAGAAAGAAGACACGACAU | | siRNA22 | ShortStack |
| gba-b1.0r1-1756 | Gossypium barbadense (Pima Cotton) 1.0 | At08:997371-997400 | - | 324 | 0.71 | CAAGAGUAGAUAAAUAAAAGAU | | siRNA22 | ShortStack |
| gba-MIRCS13a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At08:15751301-15751676 | - | 78 | 0.17 | AACAAGUCCGGUAUUAUCCUCG | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-1864 | Gossypium barbadense (Pima Cotton) 1.0 | At08:59037478-59037507 | + | 296 | 0.65 | UGGUUUGCUGAGUUCGUUCGGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-2087 | Gossypium barbadense (Pima Cotton) 1.0 | At09:8897180-8897535 | - | 1,202 | 2.64 | CGGAGAAACUCAUCAGACUUGG | | siRNA22 | ShortStack |
| gba-MIRCS100a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At09:42791576-42792039 | + | 1 | 0.00 | UAAGGAUAUCAGGACGGUUAAU | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-2366 | Gossypium barbadense (Pima Cotton) 1.0 | At10:11584597-11584704 | . | 1,025 | 2.25 | UUAUCAAGGUUCGAAGGUCGGUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-2453 | Gossypium barbadense (Pima Cotton) 1.0 | At10:91221871-91221907 | - | 284 | 0.62 | UCCUCGCGAGCACGGAUAGCAU | | siRNA22 | ShortStack |
| gba-MIRC138a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At10:92539071-92539239 | + | 1 | 0.00 | ACCGGAAUAGCUCCGAUCUCGG | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-2648 | Gossypium barbadense (Pima Cotton) 1.0 | At11:7192034-7192508 | . | 4,053 | 8.90 | UGCUCGGAACAACUUUAACAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-2649 | Gossypium barbadense (Pima Cotton) 1.0 | At11:7193490-7193764 | - | 863 | 1.90 | AAGGAAGUAUGUGAAGAUGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-2650 | Gossypium barbadense (Pima Cotton) 1.0 | At11:7194318-7194347 | - | 706 | 1.55 | CCUUCGGGCUGAGUCAUAUAAA | | siRNA22 | ShortStack |
| gba-b1.0r1-2651 | Gossypium barbadense (Pima Cotton) 1.0 | At11:7197434-7197493 | - | 496 | 1.09 | AACGUGCAUCGUCGUCAACCCA | | siRNA22 | ShortStack |
| gba-MIRC146i-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At11:20504997-20505087 | + | 1 | 0.00 | AACGUUAUUUACUGUUGGCUAA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-2789 | Gossypium barbadense (Pima Cotton) 1.0 | At11:59806213-59806330 | - | 644 | 1.41 | CGGACAUUGCGUACAUCGUUGG | | siRNA22 | ShortStack |
| gba-MIRCS202a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At11:69121300-69121397 | . | 28 | 0.06 | UAGGGGGAGCGUUUUUGCCAUA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-2892 | Gossypium barbadense (Pima Cotton) 1.0 | At11:88903649-88904326 | + | 2,569 | 5.64 | UCUUUUGCGAGAUUUGUAUGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-2950 | Gossypium barbadense (Pima Cotton) 1.0 | At11:95316991-95317198 | . | 254 | 0.56 | AUUCGGUGUCGUAGCGGGGCUA | | siRNA22 | ShortStack |
| gba-b1.0r1-2951 | Gossypium barbadense (Pima Cotton) 1.0 | At11:95321503-95321568 | - | 586 | 1.29 | UUUUUAAUUUUAGAUCUCGGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-2952 | Gossypium barbadense (Pima Cotton) 1.0 | At11:95323286-95323347 | - | 378 | 0.83 | UAUUUAUUUUAAGGUCCGGGCA | | siRNA22 | ShortStack |
| gba-b1.0r1-2961 | Gossypium barbadense (Pima Cotton) 1.0 | At11:96070549-96070591 | + | 1,686 | 3.70 | UGGAAUUAAAGAUUGUUGAGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-2981 | Gossypium barbadense (Pima Cotton) 1.0 | At12:294675-294779 | - | 882 | 1.94 | UGAAGCUGCCAGCAUGAUCUAU | miR167 | siRNA22 | ShortStack |
| gba-MIR7506aa-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At12:48916581-48916681 | + | 1 | 0.00 | UGAUAACACAUGUCGGAUCCUA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-3116 | Gossypium barbadense (Pima Cotton) 1.0 | At12:75599066-75599191 | + | 464 | 1.02 | UAUGGAAGACUUUGGCAUUUGC | | siRNA22 | ShortStack |
| gba-MIRCS231a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | At13:54276219-54276372 | + | 1 | 0.00 | UAUGGACUAUAGAAUUGAUGUA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-3349 | Gossypium barbadense (Pima Cotton) 1.0 | At13:69419793-69419823 | - | 274 | 0.60 | UUUUUAUCAUCUCGGGACACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-3367 | Gossypium barbadense (Pima Cotton) 1.0 | At13:75946299-75946329 | - | 166 | 0.36 | UUGGACAAGCAAAGAUCAACCA | | siRNA22 | ShortStack |
| gba-b1.0r1-3419 | Gossypium barbadense (Pima Cotton) 1.0 | At13:82092697-82092741 | - | 379 | 0.83 | ACAUGGAGAUAAGUAGAGAUAGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-3467 | Gossypium barbadense (Pima Cotton) 1.0 | At13:85714921-85715721 | + | 1,786 | 3.92 | UUGGACAUCAUUGAUCAAGGCAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-3474 | Gossypium barbadense (Pima Cotton) 1.0 | At13:85723696-85724155 | + | 1,168 | 2.56 | UUUGAGAACCGAAGAUAUUACU | | siRNA22 | ShortStack |
| gba-b1.0r1-3496 | Gossypium barbadense (Pima Cotton) 1.0 | C30002554:1-570 | . | 6,135 | 13.47 | AAGCAGAGGGUAUGGAAUUCAA | | siRNA22 | ShortStack |
| gba-MIRC144c-m1 | Gossypium barbadense (Pima Cotton) 1.0 | Dt01:1361467-1361715 | . | 13 | 0.03 | UUAAUUCUGAUACAAUUUGGACC | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-4075 | Gossypium barbadense (Pima Cotton) 1.0 | Dt01:52995195-52995230 | + | 422 | 0.93 | CGCAGAUAUGAUGACCAAGCUG | | siRNA22 | ShortStack |
| gba-MIRCS106a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | Dt02:38421258-38421344 | + | 1 | 0.00 | AUGUCUGAUCAGUCCUUCCACU | | siRNA22 | Hu_et_al_2015 |
| gba-MIRCS227a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | Dt03:40565168-40565306 | + | 73 | 0.16 | UUCACAUGUUGAAUUACUUGGC | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-4749 | Gossypium barbadense (Pima Cotton) 1.0 | Dt03:46609142-46609206 | - | 613 | 1.35 | CAGGUUGAAGGAGUGAUAAUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-4891 | Gossypium barbadense (Pima Cotton) 1.0 | Dt04:9800264-9800290 | - | 274 | 0.60 | UUUUUUCAUUUGUUAGGACAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-4892 | Gossypium barbadense (Pima Cotton) 1.0 | Dt04:9800769-9801067 | - | 2,678 | 5.88 | UGAACUCUAAGGCAUAGAUGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-4893 | Gossypium barbadense (Pima Cotton) 1.0 | Dt04:9801814-9802575 | - | 2,414 | 5.30 | CAAAUAUAGAUCUUAGGAUAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-4894 | Gossypium barbadense (Pima Cotton) 1.0 | Dt04:9802653-9802683 | - | 132 | 0.29 | UUCUGAAAAAGCUGUUUGAAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-4896 | Gossypium barbadense (Pima Cotton) 1.0 | Dt04:9804835-9805131 | - | 547 | 1.20 | UUCAGAAGAGCUUUUACUAGAUU | | siRNA22 | ShortStack |
| gba-MIR7502ad-m1 | Gossypium barbadense (Pima Cotton) 1.0 | Dt05:34625858-34626001 | + | 2 | 0.00 | AGUCAGGCUUUGCACGUUAGCAUU | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-5375 | Gossypium barbadense (Pima Cotton) 1.0 | Dt05:53340765-53340798 | . | 1,008 | 2.21 | AUCUCGGUGGGUUCUUACGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-5633 | Gossypium barbadense (Pima Cotton) 1.0 | Dt06:58817402-58817614 | - | 1,003 | 2.20 | GCCUUGUCCAUAAUGUAAUCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-5636 | Gossypium barbadense (Pima Cotton) 1.0 | Dt06:58819696-58819731 | - | 238 | 0.52 | AAACUUGUCAACUGAACACCGU | | siRNA22 | ShortStack |
| gba-b1.0r1-5637 | Gossypium barbadense (Pima Cotton) 1.0 | Dt06:58819809-58819846 | - | 797 | 1.75 | UGGAUCAGAAUCGACGCUCUUC | | siRNA22 | ShortStack |
| gba-MIRC125a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | Dt06:65400779-65401106 | - | 50 | 0.11 | UAGUACAACGGCCUCCAUGAUA | | siRNA22 | Hu_et_al_2015 |
| gba-MIR8740a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | Dt08:17808628-17808737 | - | 7 | 0.02 | UCUAAUAUUGUACCACAUCAUU | miR8740 | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-6265 | Gossypium barbadense (Pima Cotton) 1.0 | Dt08:56460060-56460101 | - | 1,951 | 4.28 | UUUCUGUAGGGAUUGCAUUCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-6269 | Gossypium barbadense (Pima Cotton) 1.0 | Dt08:56469004-56469094 | - | 408 | 0.90 | CAACUAAAGAGAAUGAAGGUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-6387 | Gossypium barbadense (Pima Cotton) 1.0 | Dt08:65142503-65143142 | + | 731 | 1.61 | AAGAGAAGUCGGAUAAAGAGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-7075 | Gossypium barbadense (Pima Cotton) 1.0 | Dt10:63280473-63280548 | + | 1,139 | 2.50 | CACCUGUGGAAGUACAUAUCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-7076 | Gossypium barbadense (Pima Cotton) 1.0 | Dt10:63280644-63280726 | + | 215 | 0.47 | UUUCCUGUAAAGCUGAGCAUGACA | | siRNA22 | ShortStack |
| gba-b1.0r1-7077 | Gossypium barbadense (Pima Cotton) 1.0 | Dt10:63281191-63281521 | + | 1,119 | 2.46 | UUGGAUUGGCUUUAAAUGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-7080 | Gossypium barbadense (Pima Cotton) 1.0 | Dt10:63286706-63287025 | + | 3,830 | 8.41 | CAAGCACUGCAGAAGAAUUGGU | | siRNA22 | ShortStack |
| gba-b1.0r1-7081 | Gossypium barbadense (Pima Cotton) 1.0 | Dt10:63287523-63287598 | + | 2,369 | 5.20 | AAUCAAGCCUGGACAGCCUCUG | | siRNA22 | ShortStack |
| gba-b1.0r1-7362 | Gossypium barbadense (Pima Cotton) 1.0 | Dt11:44582265-44582564 | + | 746 | 1.64 | UCUCCUAGAAGAACUUGCGCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-7377 | Gossypium barbadense (Pima Cotton) 1.0 | Dt11:51437244-51437281 | - | 2,328 | 5.11 | CGAGACUGCAUAUAACGAACCA | | siRNA22 | ShortStack |
| gba-b1.0r1-7413 | Gossypium barbadense (Pima Cotton) 1.0 | Dt11:61367262-61367288 | . | 367 | 0.81 | AGCUGAACUAGUUCAAGAUCGU | | siRNA22 | ShortStack |
| gba-b1.0r1-7628 | Gossypium barbadense (Pima Cotton) 1.0 | Dt12:44078736-44078840 | . | 48 | 0.11 | CUCUAAGUAGAUAUGGCUUUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-8055 | Gossypium barbadense (Pima Cotton) 1.0 | Dt13:54520599-54520643 | - | 839 | 1.84 | UUGAAGUUCAGAUUGAAAGGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-8143 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1:13579-13709 | . | 378 | 0.83 | AUCCCGACUCAGUUUAACUCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-8424 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10038:1592079-1592271 | - | 1,305 | 2.87 | AGAAGAUGGUGGAGACUCAGACA | | siRNA22 | ShortStack |
| gba-b1.0r1-8552 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1008:380074-380179 | - | 620 | 1.36 | UCGCAGAAGCUGUUGAUGUUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-8668 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10127:5869-5892 | - | 269 | 0.59 | UUUGGAUGGGGGCGACGAUGCG | | siRNA22 | ShortStack |
| gba-b1.0r1-9064 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10213:74517-74860 | - | 2,112 | 4.64 | UAUUGAGCUGGCAGAGAAACUU | | siRNA22 | ShortStack |
| gba-b1.0r1-9088 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10227:264064-265071 | + | 12,622 | 27.71 | ACGGUAUCAAGAUGAAUGGCUG | | siRNA22 | ShortStack |
| gba-MIRC80r-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10287:367966-368175 | - | 1 | 0.00 | CCAUGUACUCUUCAAAAUGAUC | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-9539 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10424:177757-177881 | . | 708 | 1.55 | UAUGCUCGAUCGUUGGCUUGGU | | siRNA22 | ShortStack |
| gba-b1.0r1-9540 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10424:178333-178468 | . | 313 | 0.69 | CAAGGAGAACCCACAGACCCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-9702 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10480:105097-105121 | + | 352 | 0.77 | CCCUGAACUCUUGAACAUACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-9703 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10480:107652-107677 | + | 373 | 0.82 | CCCUGAACUCUUGAACAUACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-9785 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10493:15353-15430 | + | 643 | 1.41 | UCUGACUUUGAGAAUGAUGGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-9871 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10536:332440-332473 | + | 241 | 0.53 | CCACGUAGCAAUCGAUCGUUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-10060 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold106:41173-41310 | . | 665 | 1.46 | AUAGUGACUGCAAAAUUGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-10079 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10601:67350-67408 | + | 435 | 0.96 | CAAGAGACAGAAGAAACAGUUA | | siRNA22 | ShortStack |
| gba-b1.0r1-10086 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10601:268825-268898 | + | 987 | 2.17 | CGGUUUUCUGAAUAUACCGUAG | | siRNA22 | ShortStack |
| gba-b1.0r1-10114 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10607:148499-149680 | - | 100,957 | 221.63 | UGGACCAUCAACUUACGGCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-10138 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1061:245850-245997 | - | 11,288 | 24.78 | UUUGGAAAGUGGAUAAGGUGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-10195 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10634:108929-108967 | - | 523 | 1.15 | UCUUUCGCAGAAGCUGUUGAUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-10327 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10684:188015-188352 | - | 2,943 | 6.46 | CAAGUCUGUUAGAUUGAAGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-10330 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10684:243896-243920 | + | 285 | 0.63 | UAUCAGGUUGAGGGUACACAUG | | siRNA22 | ShortStack |
| gba-b1.0r1-10348 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10685:217529-217655 | + | 285 | 0.63 | CCAGAUGUAGCGACGUAAAAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-10415 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10717:61350-61460 | . | 405 | 0.89 | UAGAGAUGUAACUUUUGAUGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-10438 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10718:136917-137042 | + | 1,050 | 2.31 | UGUUCUGUAAGCAAAGUAGGCA | | siRNA22 | ShortStack |
| gba-MIR7502i-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10719:64267-64366 | - | 2 | 0.00 | GAUAGAAUUUUUAAUAGAAGGA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-10645 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10754:498040-498177 | . | 1,056 | 2.32 | UUGGAACAAUUUACUACGGAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-10693 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10770:177522-177553 | - | 232 | 0.51 | CAAGCACGGUAGAAUCAAGGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-10718 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10775:272213-272239 | . | 394 | 0.87 | AGCUGAACUAGUUCAAGAUCGU | | siRNA22 | ShortStack |
| gba-b1.0r1-10728 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10782:53354-53407 | + | 531 | 1.17 | CAGACAAGCGAUACUCCACAGC | | siRNA22 | ShortStack |
| gba-b1.0r1-10729 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10782:53496-53722 | . | 653 | 1.43 | CGAGCAGGUCUACGAAUUUCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-10972 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10839:308401-308480 | - | 515 | 1.13 | UCGCAGAAGCUGUUGAUGUUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-10989 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10863:24089-24152 | + | 583 | 1.28 | UCAGGACACCAGAGACAGUAUC | | siRNA22 | ShortStack |
| gba-b1.0r1-11004 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10875:31252-31376 | - | 322 | 0.71 | ACUAGUGGAUUAGCAGGACUAG | | siRNA22 | ShortStack |
| gba-b1.0r1-11127 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10916:103145-103232 | - | 287 | 0.63 | CACAUUGAUCAAGAGACACAUG | | siRNA22 | ShortStack |
| gba-b1.0r1-11141 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1092:139064-139152 | . | 526 | 1.16 | AGAGAAAUUCGUAGACCUGCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-11281 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10939:115118-115309 | - | 1,506 | 3.31 | CUAGAACCGAGACUGCAUAUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-11463 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold10989:1150-1435 | . | 2,631 | 5.78 | UAUGGAGUGCUAAAGAUUUCGG | | siRNA22 | ShortStack |
| gba-b1.0r1-11829 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11099:15069-15093 | - | 267 | 0.59 | UAGAUUAGGAUACAAGUGACAA | | siRNA22 | ShortStack |
| gba-b1.0r1-11931 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11139:238823-238849 | - | 144 | 0.32 | UUGGACAAGCAAAGAUCAACCA | | siRNA22 | ShortStack |
| gba-b1.0r1-12178 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11218:547900-548008 | + | 3,229 | 7.09 | AAGAAAAUGAAAUUGUCGGCAC | | siRNA22 | ShortStack |
| gba-b1.0r1-12179 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11218:552761-552916 | - | 180 | 0.40 | CGAAGCUGUGACUCAAGUGCGG | | siRNA22 | ShortStack |
| gba-b1.0r1-12229 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1125:110328-110516 | + | 3,946 | 8.66 | CUGGAACUAGUGGAUUAGCAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-12315 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11286:172474-172632 | . | 365 | 0.80 | AUUUUCGAGAACGAGCUUGCCU | | siRNA22 | ShortStack |
| gba-MIR167c-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11303:22148-22483 | - | 6,483 | 14.23 | UGAAGCUGCCAGCAUGAUCUGG | miR167 | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-12330 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11303:22451-22589 | - | 6,055 | 13.29 | UGAAGCUGCCAGCAUGAUCUGG | miR167 | siRNA22 | ShortStack |
| gba-b1.0r1-12339 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1131:63443-63582 | - | 520 | 1.14 | CAAAGUAAGCCGGAGUCAAAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-12510 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11374:274253-274381 | - | 377 | 0.83 | UAAGCCGGAGUCAAAAGAAAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-12577 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11395:81050-81470 | - | 126,814 | 278.39 | AUCAUUGAGUACCUGUCGGCGAG | | siRNA22 | ShortStack |
| gba-b1.0r1-12606 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11395:327461-327533 | + | 377 | 0.83 | CACAUGUAUGUGGAUCUUUGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-12734 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11404:78971-79005 | . | 198 | 0.44 | UCUGUACCGAAUUGUGAGACCC | | siRNA22 | ShortStack |
| gba-MIR479d-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11465:8817-8916 | - | 67 | 0.15 | CGUGAUAUUGCUUCUGCUCAUC | miR171 | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-13067 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11511:50469-50608 | + | 258 | 0.57 | UUUAGAAUCUAAAGGCCUAGUUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-13168 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11534:113022-119387 | - | 419,691 | 921.35 | CCGAUACGAGAACUCACAUUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-13175 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11534:124691-124878 | - | 332 | 0.73 | UUUGUAUUGGCAUAUUAUUCGU | | siRNA22 | ShortStack |
| gba-b1.0r1-13176 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11534:125239-125867 | . | 14,630 | 32.12 | CAAAAGUAGAAUAACAUGGCGG | | siRNA22 | ShortStack |
| gba-b1.0r1-13275 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11547:158706-158735 | - | 154 | 0.34 | UCGGUACUGAUGCAGAGACUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-13330 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11591:33336-33383 | - | 669 | 1.47 | CACCUCGUCAAAAAAAGAUUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-13384 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11600:282550-282872 | . | 5,695 | 12.50 | UGAAAUGAUUGAGAACGCGGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-13396 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11603:5075-5283 | - | 647 | 1.42 | CACCAGUAAAGUCGGAAUCAAC | | siRNA22 | ShortStack |
| gba-b1.0r1-13399 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11603:12111-12210 | - | 469 | 1.03 | CCAAAACACCUUCGUUGGGAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-13651 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11689:65901-66171 | . | 18,947 | 41.59 | ACCAAAUUCGGACUGCCGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-13652 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11689:67205-67522 | . | 18,447 | 40.50 | AGAGAUUCUUCUAACUCGGACACU | | siRNA22 | ShortStack |
| gba-b1.0r1-13655 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11689:71200-71448 | . | 22,058 | 48.42 | CAAGGAUGGGAUUACAAGCGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-13665 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11697:838-978 | + | 473 | 1.04 | UAUGGAAGACUUUGGCAUUUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-13706 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11712:234931-234960 | - | 316 | 0.69 | UUUUUUCAUUUGUUAGGACAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-13707 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11712:235436-235855 | - | 2,643 | 5.80 | UGAACUCUAAGGCAUAGAUGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-13708 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11712:236533-237347 | - | 2,536 | 5.57 | CAUUCACAUGGUUGUAGAGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-13710 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11712:239547-239824 | - | 422 | 0.93 | UUCAGAAGAGCUUUUACUAGAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-13830 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11733:40170-40221 | . | 168 | 0.37 | AUAAGUAUGCGUGUAUCUAUUG | | siRNA22 | ShortStack |
| gba-b1.0r1-13851 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11743:64492-64537 | . | 603 | 1.32 | UCUGGAAGUAACCACGGAGCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-13855 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11747:144001-144253 | . | 491 | 1.08 | UGCGGAUGGGAUUAGAGUUGAUC | | siRNA22 | ShortStack |
| gba-b1.0r1-13962 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold118:253601-253870 | . | 248 | 0.54 | CUGGAACAAUUGGAUUGGCAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-13963 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold118:253975-254108 | + | 521 | 1.14 | UGAAGACCAGCUACUCAUACAU | | siRNA22 | ShortStack |
| gba-b1.0r1-14095 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1187:148956-148986 | - | 243 | 0.53 | AAUAAACUCGGAGGCAUAUCUA | | siRNA22 | ShortStack |
| gba-b1.0r1-14101 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold11871:139155-139184 | + | 398 | 0.87 | CGCAGAUAUGAUGACCAAGCUG | | siRNA22 | ShortStack |
| gba-b1.0r1-14419 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12:90504-90532 | + | 4,548 | 9.98 | UCUAAGGACUUGAAGAUAGCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-14648 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12094:140603-140640 | - | 445 | 0.98 | CUGAUUUUGAGAAGUGUGAUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-14652 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12102:12669-12921 | . | 805 | 1.77 | AUUUUCGAGAACGAGCUUGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-14677 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12104:6444-6930 | + | 705 | 1.55 | AGAGAAGUCGGAUAAAGAGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-14703 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1211:304450-304617 | . | 473 | 1.04 | UGGGGCAAGGAAUGUUAGCGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-14704 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1211:305954-305980 | . | 308 | 0.68 | UAUAACGAACCAUACGAGCUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-14733 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12116:14167-14321 | . | 639 | 1.40 | UGACCCAAUCACACCUCGUCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-14811 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12129:31209-31230 | - | 5,136 | 11.28 | UCGGUCCCCGGCAACGGCGCCA | miR8175 | siRNA22 | ShortStack |
| gba-b1.0r1-14940 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12198:53654-53955 | + | 1,610 | 3.53 | AUGGAAGAAGGAUACUGGCAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-15098 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12251:6412-6526 | + | 135 | 0.30 | UACGGCACAAGAAAGAAAACAA | | siRNA22 | ShortStack |
| gba-MIRC59l-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12256:407334-407531 | . | 3 | 0.01 | UGAUUCAAAUGUAUACUUGUAACU | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-15151 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12263:57493-57660 | . | 664 | 1.46 | GAUUGUUGUGGUAACUCGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-15240 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12276:35091-35335 | . | 638 | 1.40 | UUGGACAAUGUAGUAAAGCCGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-15245 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12276:67487-67838 | . | 2,859 | 6.28 | UGAAAUGUCUUAAUGUAGGAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-15376 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12345:45156-45180 | - | 106 | 0.23 | AUACCGAUGGUGUGUGCGCUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-15712 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold125:87997-88294 | - | 444 | 0.98 | AUGAUGUAGCAGUGAUGGUAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-15829 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12554:33397-33519 | - | 288 | 0.63 | UCUUGGAAAAGGACAUUGGCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-15884 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1259:31158-31459 | . | 744 | 1.63 | CAGACGAGGGUAAAAUUUGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-16051 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12648:24204-24299 | + | 860 | 1.89 | CACCAUUUUUCGGAUUGAAAAA | | siRNA22 | ShortStack |
| gba-b1.0r1-16053 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12648:45613-45638 | - | 1,442 | 3.17 | ACGAGCAGCUGUUGGUUCACUG | | siRNA22 | ShortStack |
| gba-b1.0r1-16200 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12708:24217-24472 | - | 1,346 | 2.96 | UCUGGAUGCAAGACAUGGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-16201 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12708:36714-36964 | . | 836 | 1.84 | UGAGAGGACCAAGAGGCACAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-16202 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12708:37004-37028 | + | 62 | 0.14 | UAGGAUAGUGGAAAAGGUUAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-16208 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12715:149078-149478 | - | 4,011 | 8.81 | AGAGGAACAAGACCAUUGACUGAG | | siRNA22 | ShortStack |
| gba-b1.0r1-16231 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12734:60042-60171 | + | 432 | 0.95 | AUUAGUCAACCCGAACGGCAUC | | siRNA22 | ShortStack |
| gba-b1.0r1-16245 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12745:7280-7326 | . | 276 | 0.61 | UAAGAGCUCUACGGAAAUUGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-16403 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1279:496156-496231 | . | 13,011 | 28.56 | AUCAAUAGACAGGCGUGUGGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-16640 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12875:107763-107885 | + | 226 | 0.50 | CAAGUAUGAAAUCGUGUGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-16662 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12885:51351-51502 | - | 1,244 | 2.73 | UAAACUUUGAAUGGCUUCGGUG | | siRNA22 | ShortStack |
| gba-b1.0r1-16663 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12885:51954-52191 | . | 565 | 1.24 | CUGAUUGCAGCAAAGAGCCAAA | | siRNA22 | ShortStack |
| gba-b1.0r1-16689 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12885:226310-226464 | . | 1,985 | 4.36 | AGUAAAUUGACCGGAACGAAAAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-16701 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12889:30862-30891 | - | 218 | 0.48 | UCAUUGAUAUCUUGAGACCUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-16896 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12973:3021-3204 | + | 1,908 | 4.19 | CAUAAAGGACAUAAGCAGAUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-16897 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold12973:17455-17550 | - | 1,369 | 3.01 | CAAACCAGUAGUACUUUGCAGC | | siRNA22 | ShortStack |
| gba-b1.0r1-16937 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13000:5294-5513 | - | 593 | 1.30 | UCACGACAAAAGGCACAUUCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-16964 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13012:58569-58666 | - | 142 | 0.31 | UCUUGAAGGCUCUAGAAGAAAA | | siRNA22 | ShortStack |
| gba-b1.0r1-16998 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13040:34129-34157 | - | 197 | 0.43 | UGGAUGUUAAGACUGCGUUUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-16999 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13040:34246-34311 | - | 301 | 0.66 | AAAUGGUAAUGUGGAAAGGUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-17036 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13055:133663-133686 | - | 133 | 0.29 | CAAGGAAUUUUGGACUGAGGCA | | siRNA22 | ShortStack |
| gba-b1.0r1-17037 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13055:134632-134739 | . | 268 | 0.59 | UUCUCACGACAAAAGGCACAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-17079 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13085:47025-47173 | . | 2,611 | 5.73 | UUAGCUCAGGUUGGAGGCCGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-17080 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13085:47248-47467 | . | 3,540 | 7.77 | CCCACACGAGCGUAUGAAGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-17104 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13089:118318-118680 | - | 1,062 | 2.33 | UGAGAUAGGUAGAUGAGUCUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-17285 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13110:165067-166381 | + | 2,505 | 5.50 | UUGGACAUCAUUGAUCAAGGCAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-17289 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13110:168697-169124 | + | 2,623 | 5.76 | UGCCAACCCCUGAAUUCGGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-17290 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13110:173841-174082 | + | 931 | 2.04 | UUUGAGAACCGAAGAUAUUACU | | siRNA22 | ShortStack |
| gba-MIRC64d-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13110:253423-253575 | + | 1 | 0.00 | UUGCAUUGAUUUUCAGCUAGAA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-17416 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13177:58329-58470 | . | 215 | 0.47 | CAAUAAGUUAGGGCACGAUUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-17425 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13181:158079-158220 | . | 1,185 | 2.60 | CUGAGUCGUGCUAAAGUUAGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-17454 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13196:31419-31525 | - | 387 | 0.85 | UUGCUAUCUCGCAGUGCGGUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-17594 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13249:116970-117215 | . | 582 | 1.28 | AUUUUCGAGAACGAGCUUGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-17725 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13288:9313-9342 | + | 277 | 0.61 | UAAGGAGUGGCAAGAUAGAAGC | | siRNA22 | ShortStack |
| gba-MIRC80ad-m3 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13307:293226-293342 | - | 13 | 0.03 | AUGGCCUGAGAGACAAACGUGU | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-17992 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13355:1-121 | - | 252 | 0.55 | AUAGACAAGUGGCUCAAGGAGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-17998 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13355:9189-9313 | . | 1,109 | 2.44 | GCAUUAUUCGUAAUCUGAACCU | | siRNA22 | ShortStack |
| gba-b1.0r1-18135 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1344:262919-263130 | . | 3,079 | 6.76 | UCGCAGUGCGGUCUCGAGUUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-18236 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13465:84060-84370 | . | 784 | 1.72 | CUGGUUAAUUCUGCCUAGUGGCCC | | siRNA22 | ShortStack |
| gba-b1.0r1-18237 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13465:84416-84653 | - | 284 | 0.62 | CAGAAGAAUGUUACACCUUGGAGC | | siRNA22 | ShortStack |
| gba-b1.0r1-18239 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13465:86457-86736 | . | 1,568 | 3.44 | CGGGAUAAUAUACAUGAGCAUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-18240 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13465:88542-89154 | . | 2,591 | 5.69 | CGAGCAUAAGUCUUUCGGACCU | | siRNA22 | ShortStack |
| gba-b1.0r1-18241 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13465:89476-91677 | . | 8,500 | 18.66 | CAAUUUGGAUAACUGGGACAUC | | siRNA22 | ShortStack |
| gba-b1.0r1-18242 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13465:91787-97772 | . | 24,807 | 54.46 | UCUGGGGACCUGUUAUGACGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-18248 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13465:110735-111539 | - | 9,986 | 21.92 | UUUGGACAACCCGAGGACUGAG | | siRNA22 | ShortStack |
| gba-b1.0r1-18255 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13465:130403-131008 | . | 5,043 | 11.07 | UGUUCGACGUUCGGCAAUUCGG | | siRNA22 | ShortStack |
| gba-b1.0r1-18307 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13479:135488-135566 | - | 645 | 1.42 | UCAACCAUGAUGAAGAACGAGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-18308 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13479:136714-137095 | . | 4,137 | 9.08 | CAAAUUGAAGAACCAUGACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-18313 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1348:328156-328196 | + | 896 | 1.97 | CAAGACAAGAAUUCGAACGAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-18383 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13515:144715-144823 | . | 392 | 0.86 | AAAGAUUCCAUGGAUAGUGCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-18384 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13515:144907-145003 | + | 775 | 1.70 | UAUUGAGCUGGCAGAGAAACUU | | siRNA22 | ShortStack |
| gba-b1.0r1-18412 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13526:23838-23918 | . | 247 | 0.54 | AGUAAAUUGACCGGAACGAAAAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-18416 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13532:73536-73665 | - | 521 | 1.14 | GUGUAGAAUUUAAUCGAGCCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-18461 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13560:76090-76476 | - | 6,281 | 13.79 | CAAGAUUCGAUAGAAAGGCCUG | | siRNA22 | ShortStack |
| gba-b1.0r1-18462 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13560:76586-76741 | . | 485 | 1.07 | UCGAAGAACCUUGCUGAUUAGUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-18517 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13581:31257-31397 | . | 114 | 0.25 | UCGAUACAGGAUCUCGUCGGGU | | siRNA22 | ShortStack |
| gba-b1.0r1-18518 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13581:31501-32016 | . | 4,252 | 9.33 | UUCGGCACUCUAACAAACUCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-18519 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13581:32100-32372 | . | 1,424 | 3.13 | UCUGACUUUGAGAAUGAUGGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-18520 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13581:33502-33523 | . | 188 | 0.41 | CAACGAUGGAGAGAAGUGGCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-18521 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13581:33562-33980 | . | 1,905 | 4.18 | AGAGGGCGAAGUAAACAACGUAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-18522 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13581:34213-34301 | - | 180 | 0.40 | UCUUCGUUCCUUCGGGCCUUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-18523 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13581:45650-46194 | - | 4,446 | 9.76 | AAAGGAUUUUUAGAUGACACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-18650 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13650:55650-55671 | + | 4,635 | 10.18 | UCGGUCCCCGGCAACGGCGCCA | miR8175 | siRNA22 | ShortStack |
| gba-b1.0r1-18656 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13653:30740-30914 | - | 736 | 1.62 | UUUAUUGCAGCAACCGAAGCGU | | siRNA22 | ShortStack |
| gba-b1.0r1-18742 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1369:329137-329277 | . | 340 | 0.75 | CUUAACUCGAGCCGUCCUACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-18763 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1370:222005-222084 | - | 415 | 0.91 | CCAACGCUAUGUCCCAGACAUG | miR7506 | siRNA22 | ShortStack |
| gba-b1.0r1-18883 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13793:306182-306399 | . | 410 | 0.90 | CGAGGCCCAGAACUUGUUCCACC | | siRNA22 | ShortStack |
| gba-b1.0r1-18999 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold13888:4225-4386 | + | 1,230 | 2.70 | AAGCACGGAAUGUAUUUGCACC | | siRNA22 | ShortStack |
| gba-b1.0r1-19037 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1390:194852-195605 | + | 91,700 | 201.31 | UCUUGCCUACUCCACCCAUGCC | miR482 | siRNA22 | ShortStack |
| gba-b1.0r1-19075 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1393:280299-280600 | . | 696 | 1.53 | GUUCCGUUGUAGCAUUCUGUUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-19118 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1394:280848-280872 | - | 211 | 0.46 | UGAAAAAAAAGAAUGAAAACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-19203 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1397:165668-165694 | + | 188 | 0.41 | UUAAAAAAUGGAUUACUUGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-19602 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14130:107505-107822 | . | 6,392 | 14.03 | CUUAGCAAAUCGUUGUACGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-19750 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14197:59725-59849 | . | 338 | 0.74 | AGGAAUGUUAGCGUCGAACCCAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-19793 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14204:22360-22390 | - | 294 | 0.65 | ACUCGAAUAAUGUUAUCGUCUA | | siRNA22 | ShortStack |
| gba-b1.0r1-19981 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14308:16761-16876 | . | 409 | 0.90 | AUCCUUCGGGCUGAGUCAUAUAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-20081 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14339:310032-310139 | . | 185 | 0.41 | UAAAGUAUUGAUAAAGAGAACGGU | | siRNA22 | ShortStack |
| gba-b1.0r1-20133 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14353:229957-230014 | . | 203 | 0.45 | GGGUUCCACUUGAGCUGAGACGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-20152 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14365:68919-68994 | - | 1,224 | 2.69 | AGAUUGAGGAGAAAAAUGGCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-20159 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14366:127150-127172 | - | 176 | 0.39 | UCAUGAAGGACCAGAAGUACAA | | siRNA22 | ShortStack |
| gba-b1.0r1-20160 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14366:127215-127454 | . | 589 | 1.29 | UCAGAAGGAGGGAAUUGACUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-20245 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14379:130250-130839 | . | 36,718 | 80.61 | UACGGUAGAAGAAUAUAUGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-20246 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14379:130951-131206 | - | 6,844 | 15.03 | AUCAAGGCGGUCGAACAAAUCAGU | | siRNA22 | ShortStack |
| gba-b1.0r1-20247 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14379:131255-131994 | . | 4,413 | 9.69 | ACCCAGGGGCUGGCCGAGUGUGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-20249 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14379:132577-132809 | . | 1,272 | 2.79 | CUUGCAUAUCUCUUUGGAGCUG | | siRNA22 | ShortStack |
| gba-b1.0r1-20250 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14379:134137-134184 | - | 659 | 1.45 | CAUGAUUGGGCAACGGAUUUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-20252 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14379:140550-140707 | . | 437 | 0.96 | ACUGCUCAUACUGUAUUUGGCA | | siRNA22 | ShortStack |
| gba-b1.0r1-20464 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14466:13220-13381 | - | 297 | 0.65 | UAAGGACACAUAUAUAAUACAU | | siRNA22 | ShortStack |
| gba-b1.0r1-20546 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14485:134791-134971 | - | 1,479 | 3.25 | UACAGUAGUUGAGAUUGAGGAG | | siRNA22 | ShortStack |
| gba-b1.0r1-20585 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1450:11050-11077 | + | 189 | 0.42 | UGAAGAUAUUCAGACAAGCGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-20586 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1450:11152-11465 | . | 940 | 2.06 | CGAGCAGGUCUACGAAUUUCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-20730 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14573:12070-12102 | - | 137 | 0.30 | UUGUUUGUGAUUGCAUGGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-20765 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14583:18973-19025 | - | 937 | 2.06 | CUGGUGGUAGAAAUUGGGUUUA | | siRNA22 | ShortStack |
| gba-b1.0r1-20869 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14607:142360-143199 | . | 6,890 | 15.13 | UUUAAAGGAUUGUAUUGGGACC | | siRNA22 | ShortStack |
| gba-b1.0r1-20870 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14607:143289-144057 | . | 7,732 | 16.97 | UGGUGGAGGUAGUUGAUGGUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-20871 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14607:144131-145259 | . | 7,263 | 15.94 | UUUAAAGGAUUGUAUUGGGACC | | siRNA22 | ShortStack |
| gba-b1.0r1-21023 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14639:321277-321597 | + | 542 | 1.19 | CGAGGAUGAGAACCAAGAACGA | | siRNA22 | ShortStack |
| gba-b1.0r1-21036 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14641:11520-11681 | . | 999 | 2.19 | CAGACGAGGGUAAAAUUUGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-21141 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14656:554110-554391 | . | 6,881 | 15.11 | UAACCGGUGGUUGAUCUUCGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-21148 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14656:561353-562246 | - | 8,264 | 18.14 | UUGCGGAUUGUACCACACGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-21149 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14656:562345-563404 | . | 21,949 | 48.19 | CAGGAAGAGAAUACAACAACAA | | siRNA22 | ShortStack |
| gba-b1.0r1-21150 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14656:564512-564658 | - | 386 | 0.85 | AGAGACUGCAUUUCUUCAUUCACA | | siRNA22 | ShortStack |
| gba-b1.0r1-21152 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14656:566965-568237 | . | 10,444 | 22.93 | UAACCGGUGGUUGAUCUUCGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-21271 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1471:59428-59600 | - | 434 | 0.95 | CAGACUUUGGCGAAGCAAGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-21291 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14713:211222-211416 | + | 480 | 1.05 | CAAGAUUGCGGGUAUAGGUGUG | | siRNA22 | ShortStack |
| gba-b1.0r1-21340 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14722:42681-42828 | + | 513 | 1.13 | AGGUACUAAUUCAUGAUCUGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-21343 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14725:33986-34106 | . | 405 | 0.89 | UGCUCGAUCGUUGGCUUGGUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-21411 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14754:83192-83521 | . | 1,768 | 3.88 | UUCUCACGACAAAAGGCACAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-21518 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14802:252760-253166 | . | 384 | 0.84 | ACCUGUAAGUACCCCGUUGGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-21568 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14816:112636-119642 | - | 565,606 | 1,241.67 | CUGGACUCCAAGAUGACGACUG | | siRNA22 | ShortStack |
| gba-MIRCS13a-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14878:131921-132296 | - | 76 | 0.17 | AACAAGUCCGGUAUUAUCCUCG | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-21670 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold149:169186-169370 | + | 427 | 0.94 | UUUUAAAGGAUUGUAUUGGGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-21692 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14905:114037-114128 | - | 818 | 1.80 | UCGCAGAAGCUGUUGAUGUUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-21744 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14944:31009-31135 | + | 186 | 0.41 | UUGUUUGUGAUUGCAUGGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-21773 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14947:142364-142395 | + | 279 | 0.61 | UUAGUUCAUGGAGAGACUUGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-21774 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold14950:1125-1205 | + | 2,660 | 5.84 | UGGACAUGGGUUUGGGACACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-21873 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1503:232550-232811 | . | 3,973 | 8.72 | AGCAGAAACCUUCAGAUCUCUA | | siRNA22 | ShortStack |
| gba-b1.0r1-21874 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1503:234852-234915 | + | 185 | 0.41 | UCAGAUGCAUGAACGACUGGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-22042 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15089:13454-13544 | . | 292 | 0.64 | GCACCGGAUCCUAUCAGAACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-22118 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15104:37518-37804 | - | 645 | 1.42 | AAAAAGGACAUUGGCAAGCUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-22265 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15231:76459-76599 | . | 466 | 1.02 | UAGAACCGAGACUGCAUAUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-22395 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15311:43879-44114 | . | 739 | 1.62 | UCAUCAGAGACUGUCCGAAAGU | | siRNA22 | ShortStack |
| gba-b1.0r1-22545 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15385:3438-3522 | . | 758 | 1.66 | UAGUGACUGCAAAAUUGGCGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-22585 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15427:25620-25782 | + | 801 | 1.76 | UAAUGUUCUGUAGCGGCGUUUG | | siRNA22 | ShortStack |
| gba-b1.0r1-22592 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15441:59404-59425 | + | 213 | 0.47 | CGGCAUCGAAAUCGAAAUUCUG | | siRNA22 | ShortStack |
| gba-b1.0r1-22828 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15568:4023-4226 | . | 329 | 0.72 | CAAUGAAUGGAGCAGUAGGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-22870 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15586:1958-2244 | . | 474 | 1.04 | CUUGUGUGACUGUUGGAUAUUA | | siRNA22 | ShortStack |
| gba-b1.0r1-23158 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15706:663-697 | . | 1,039 | 2.28 | AUCUCGGUGGGUUCUUACGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-23190 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15712:163031-163518 | + | 4,521 | 9.93 | UCUAUGUAGAAGAAGAGGCGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-23249 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15731:80414-80539 | + | 365 | 0.80 | CGCGGCCUGACAUUUCACAAGC | | siRNA22 | ShortStack |
| gba-b1.0r1-23304 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15756:76465-76898 | + | 5,856 | 12.86 | CAGACAUGGACGGAGACAUUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-23305 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15756:77054-77305 | + | 3,910 | 8.58 | UUUACGUGGAUUUGGGCAGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-23306 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15756:77713-77815 | + | 585 | 1.28 | CUUGAUUAAGGUUGUUAGAGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-23315 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15760:55918-56100 | + | 136 | 0.30 | UGGACAGGGAAGACGAUUCUG | | siRNA22 | ShortStack |
| gba-b1.0r1-23316 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15760:56813-57025 | . | 148 | 0.33 | ACCAAGCAGGAGAACUUGUCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-23319 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15760:83346-83368 | + | 165 | 0.36 | UGAGCGAGUAGUGGAUCAUGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-23332 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15766:168515-168811 | - | 2,251 | 4.94 | UUUGGAGAAGGUACUACAACGU | | siRNA22 | ShortStack |
| gba-b1.0r1-23333 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15766:168850-169060 | . | 829 | 1.82 | UCCGAGACAAUGGUACAAACGA | | siRNA22 | ShortStack |
| gba-b1.0r1-23346 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15785:534-635 | + | 1,061 | 2.33 | GCACCGGAUCCCAUAAGAACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-23396 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15818:81529-81738 | + | 334 | 0.73 | CGUCAAAAAAGGAUUGGUGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-23397 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15818:82551-82922 | . | 11,747 | 25.79 | AGCUUUAGGGCACGUAGAUGAGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-23398 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15818:83039-84072 | . | 101,578 | 222.99 | UACAAGAAGCUGCGAUCGUCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-23399 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15818:84257-84510 | . | 3,619 | 7.95 | CGAUGACGUGGCAGAAAUAGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-23400 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15818:86542-87748 | + | 76,838 | 168.68 | AAGGCUCGAAGGAAUGAAGACGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-23402 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15818:96228-96748 | . | 16,718 | 36.70 | CAAGAUCAGAUGCAUGAACGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-23403 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15818:97821-98783 | . | 60,918 | 133.73 | UAUGGGAUCAAUGGGACGACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-23404 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15818:98959-99198 | . | 2,142 | 4.70 | AUCAAAACCAAGAUCGCCUUAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-23461 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15848:10553-10642 | + | 267 | 0.59 | AUGACGUGGCAGAAGUGGAAAA | | siRNA22 | ShortStack |
| gba-b1.0r1-23462 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15848:10834-10881 | + | 211 | 0.46 | UGCUUCCAGGACAGUUUGAUCGG | | siRNA22 | ShortStack |
| gba-b1.0r1-23469 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15851:90939-90976 | - | 298 | 0.65 | CAUUCAGAGCGGCUGACUCCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-23502 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15872:97970-98082 | - | 330 | 0.72 | CAACAUGUGGUUGAUGAACGGG | | siRNA22 | ShortStack |
| gba-b1.0r1-23517 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold159:119779-119874 | + | 460 | 1.01 | UUGGAACUCGGAGCAUACUAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-23554 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold15948:62145-62203 | + | 723 | 1.59 | AAGAAAAUGAAAUUGUCGGCAC | | siRNA22 | ShortStack |
| gba-b1.0r1-23775 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1604:361202-361431 | - | 579 | 1.27 | UAUGGGAUCAAUGGGACGACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-23961 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold16120:61492-61515 | + | 248 | 0.54 | UGGGACUGAACAAAUAUUGCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-24147 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold16235:182537-182571 | + | 494 | 1.08 | UUCUGGAGUAAAGGGAUUUCGU | | siRNA22 | ShortStack |
| gba-b1.0r1-24174 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold16250:36512-36717 | . | 285 | 0.63 | UUGGACAAUGUAGUAAAGCCGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-24204 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1628:287017-287044 | - | 803 | 1.76 | GUGUAGAAUUUAAUCGAGCCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-24226 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold16288:26916-26997 | - | 558 | 1.23 | UACAACCAACUGAGUCGUGCUA | | siRNA22 | ShortStack |
| gba-b1.0r1-24440 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold16431:55141-55223 | + | 483 | 1.06 | AGUGAUUAACGAGUCGUGGCCC | | siRNA22 | ShortStack |
| gba-b1.0r1-24837 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1678:88985-90128 | . | 11,040 | 24.24 | AACUAAGCAGGGCACAGGACAA | | siRNA22 | ShortStack |
| gba-b1.0r1-24876 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold16798:90253-90602 | . | 113 | 0.25 | CAUGUCUUUGUAGUUCGGCACA | | siRNA22 | ShortStack |
| gba-b1.0r1-25223 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17015:1551-1602 | . | 423 | 0.93 | GGGUUCCACUUGAGCUGAGACGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-25312 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17072:196758-196784 | - | 1,722 | 3.78 | UGGAAUUAAAGAUUGUUGAGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-25567 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold172:850796-850917 | + | 238 | 0.52 | UGAGCGAGUAGUGGAUCAUGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-26421 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17544:97720-97838 | - | 305 | 0.67 | UGAAGACCAGCUACUCAUACAU | | siRNA22 | ShortStack |
| gba-b1.0r1-26479 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold176:79909-80105 | - | 3,025 | 6.64 | AUGGUAAUGUGGAAAGGUAUAAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-26481 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold176:103932-104048 | + | 858 | 1.88 | AUGGAUUAGGGGCAUAACGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-26482 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold176:105395-105503 | . | 879 | 1.93 | UUGCUAUCUCGCAGUGCGGUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-26540 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17609:14107-14209 | - | 1,493 | 3.28 | CUGAUUUUGAGAAGUGUGAUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-26566 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17637:78156-78368 | . | 265 | 0.58 | CUAGAAGACAUCUGCAACAGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-26599 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17663:1-168 | . | 1,433 | 3.15 | GAAUGUCCUGCUGUAUUGUCUACC | | siRNA22 | ShortStack |
| gba-b1.0r1-26601 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17663:3900-4223 | - | 22,107 | 48.53 | UAAGUAGAAUUGAAGAGAUGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-26602 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17663:4600-5369 | . | 86,721 | 190.38 | UUUGGAAAGUGGAUAAGGUGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-26603 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17663:6586-6633 | + | 2,193 | 4.81 | UCGGAUUGAAAAACGGGGUCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-26669 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1770:145527-145712 | + | 2,261 | 4.96 | CUGGAACUAGUGGAUUAGCAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-26681 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17714:5123-5147 | - | 227 | 0.50 | UGAAAAAAAAGAAUGAAAACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-26710 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17746:86563-86674 | - | 2,459 | 5.40 | CGGAUGUGAGAUAGGUAGAUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-26745 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17750:195341-195493 | . | 547 | 1.20 | AUUUUCGAGAACGAGCUUGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-26825 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1778:3902-4244 | - | 112,098 | 246.09 | UCUUGCCUACUCCACCCAUGCC | miR482 | siRNA22 | ShortStack |
| gba-b1.0r1-26876 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold178:311132-311780 | - | 3,665 | 8.05 | UUUUUGAUAGGUAGAGUAUGGA | | siRNA22 | ShortStack |
| gba-b1.0r1-26899 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17805:57433-58337 | . | 2,527 | 5.55 | CGCUGAUUUCGGUUACUACUUU | | siRNA22 | ShortStack |
| gba-b1.0r1-26900 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17805:59095-60727 | . | 17,303 | 37.99 | CGAGAAUGCAGAAUCUAGUUAC | | siRNA22 | ShortStack |
| gba-b1.0r1-26904 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17805:63992-65161 | . | 18,808 | 41.29 | UUUAUUUUGGAGACCUGUUGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-26933 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17829:97716-97787 | . | 541 | 1.19 | UUUCCGUCGCUGUAGUUUCCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-27091 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17849:25075-25145 | - | 17,901 | 39.30 | UGAAGCUGCCAGCAUGAUCUAA | miR167 | siRNA22 | ShortStack |
| gba-b1.0r1-27128 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1785:39821-39854 | - | 1,401 | 3.08 | UAGUUGAGAGAACCUGUAAGGCA | | siRNA22 | ShortStack |
| gba-b1.0r1-27229 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1791:52651-52815 | - | 1,223 | 2.69 | CUAGAACCGAGACUGCAUAUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-27327 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1795:18175-18200 | - | 202 | 0.44 | AUGGAUUAGGGGCAUAACGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-27364 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17961:31645-31702 | + | 345 | 0.76 | UUAGCAUAUGAGACUUUUGCCA | | siRNA22 | ShortStack |
| gba-b1.0r1-27365 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17961:32109-32230 | . | 266 | 0.58 | AUCCUUCGGGCUGAGUCAUAUAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-27386 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold17992:1-320 | + | 1,058 | 2.32 | CUUGAACCUGUAAACCCAUCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-27518 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold18090:170991-171043 | - | 302 | 0.66 | GAGCAAUGAAGAGAACCGCGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-27522 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold18093:39668-39695 | - | 418 | 0.92 | UGAGAACUGCACUGCAUUCAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-27555 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1811:216174-216561 | - | 819 | 1.80 | UAGAGGUAAUGUUAGACGGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-27631 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold18168:34185-34255 | + | 367 | 0.81 | CUUUCCGCUACAAAUUGGUACC | | siRNA22 | ShortStack |
| gba-b1.0r1-27640 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1817:174692-175608 | . | 2,424 | 5.32 | CAGUGCAGUCGAGUUUUGAAAC | | siRNA22 | ShortStack |
| gba-b1.0r1-27657 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1819:97472-97577 | + | 587 | 1.29 | UCAGGAGCAGGGACAAUGUCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-27659 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1819:100469-100694 | + | 303 | 0.67 | CAUGGUUUUCGCAUUGGGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-27697 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1821:162929-164256 | . | 14,954 | 32.83 | ACACGACUAGACAUACAUUGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-27698 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1821:172023-172066 | . | 656 | 1.44 | AGAAUGUCCGGAGUAGUUGCUU | | siRNA22 | ShortStack |
| gba-b1.0r1-27701 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1821:173195-173518 | . | 925 | 2.03 | AUACAGUUGACUCACACAUUAC | | siRNA22 | ShortStack |
| gba-b1.0r1-27702 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1821:173634-173960 | . | 3,880 | 8.52 | CUCCUUAUAUUCGUCACCGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-27703 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1821:174907-175405 | . | 5,749 | 12.62 | CCCUAUUUUGGGGAUUGAGUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-27704 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1821:187261-187615 | . | 342 | 0.75 | UGAAACCUGAACAGAAAGGUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-27993 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold18347:1-110 | . | 238 | 0.52 | UUGUGAAAUGUCAAGCCUCGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-28001 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold18347:197780-197909 | - | 1,133 | 2.49 | UCAGAUCAUUGGCGUCAACCCC | | siRNA22 | ShortStack |
| gba-b1.0r1-28069 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold18388:183685-183752 | - | 1,511 | 3.32 | GGGGAUGUAGCUCAGAUGGUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-28172 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold18455:44485-44605 | . | 1,066 | 2.34 | CAAGGUGGAGAUUAUUGGAUAC | | siRNA22 | ShortStack |
| gba-b1.0r1-28291 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1850:97208-97754 | + | 3,119 | 6.85 | CAGACGAGGGUAAAAUUUGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-28305 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1852:146137-146204 | . | 400 | 0.88 | ACCGGGUUCAUGCUGUAGAGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-28631 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold18738:56175-56682 | . | 715 | 1.57 | AAAAUUAGUCUGUAGGGGGUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-28681 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold18789:9897-9918 | + | 199 | 0.44 | CCGGAGGUAGGGUUCAGCGGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-28914 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold18958:5973-6125 | . | 59 | 0.13 | UUUCUCUGAGUUUAAGUCGCUU | | siRNA22 | ShortStack |
| gba-b1.0r1-28920 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1896:75506-75638 | + | 1,319 | 2.90 | UAUAUGGCUUUACUUCGGUGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-29014 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1903:12058-12252 | + | 1,229 | 2.70 | CACCAAAACAGGCCUGAGACAA | | siRNA22 | ShortStack |
| gba-b1.0r1-29298 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold19218:26355-26741 | . | 549 | 1.21 | UAAUCGGGACUUAAUUGGUAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-29301 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold19221:666-925 | + | 566 | 1.24 | UAUGGGAUCAAUGGGACGACGG | | siRNA22 | ShortStack |
| gba-MIR7484p-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold19226:25288-25428 | + | 2 | 0.00 | AAAUUGAUCAUUUCUGUAGAAA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-29364 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold19235:220015-220095 | + | 346 | 0.76 | AGAAGAUUGGAUUUUAAGUAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-29670 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold19463:31314-31340 | . | 450 | 0.99 | AGCUGAACUAGUUCAAGAUCGU | | siRNA22 | ShortStack |
| gba-b1.0r1-29673 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold19472:4570-4716 | + | 419 | 0.92 | AGAAGAUGGUGGAGACUCAGACA | | siRNA22 | ShortStack |
| gba-b1.0r1-29735 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1955:70119-70268 | + | 12,102 | 26.57 | AAAGAAGUCAGAGAUCGUCCAC | | siRNA22 | ShortStack |
| gba-b1.0r1-29752 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold19550:35558-35668 | . | 980 | 2.15 | CAGGAUUGAGUAAUUUGCGCGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-29884 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold196:384717-384843 | - | 20,497 | 45.00 | CGGACUUGUUGAGAAUGGUAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-30113 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold197:302208-302323 | - | 1,311 | 2.88 | UUAUUUCGAUGUGAUUGGGCUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-30212 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold1982:295753-295829 | + | 919 | 2.02 | CACUGAGAAAUCUGGGAGUUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-30370 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold19986:39705-40048 | . | 518 | 1.14 | CUAGGACUGAAGGAGCAGAUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-30644 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2017:77544-77634 | . | 417 | 0.92 | CUUCUCUCCAUCGUUGGGCGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-30686 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2021:70111-70172 | + | 452 | 0.99 | CAUAUCAUUGAUAUCUUGAGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-30797 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20322:57-345 | - | 1,468 | 3.22 | CAGGGAAGAGAAGUGGAUCACA | | siRNA22 | ShortStack |
| gba-b1.0r1-30804 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20324:7519-7659 | - | 285 | 0.63 | UGAAGACCAGCUACUCAUACAU | | siRNA22 | ShortStack |
| gba-b1.0r1-30805 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20324:7987-8042 | . | 111 | 0.24 | CGGGUCUUGAUUGUGAUUAACU | | siRNA22 | ShortStack |
| gba-b1.0r1-30857 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20369:24700-24723 | + | 557 | 1.22 | ACUCGAUUGAGAACUGCACUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-30858 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20369:27752-27858 | + | 680 | 1.49 | UUUUGUCUGAACUCUAAGGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-31071 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20474:65-95 | + | 405 | 0.89 | UGGCAAUCGGUUAAUUAGAUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-31072 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20474:530-741 | . | 1,094 | 2.40 | CUAUGCCAUAACCUGGUAGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-31073 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20474:1161-1240 | + | 311 | 0.68 | UUCUCACGACAAAAGGCACAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-31091 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2048:172291-172361 | - | 454 | 1.00 | AUAGAAGAACUCGAGACCGCAC | | siRNA22 | ShortStack |
| gba-b1.0r1-31221 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20515:2697-2736 | - | 1,937 | 4.25 | UUUCUGUAGGGAUUGCAUUCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-31225 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20515:11642-11739 | - | 414 | 0.91 | CAACUAAAGAGAAUGAAGGUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-31450 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20609:138952-139269 | . | 1,772 | 3.89 | AACGGAUUCGCUGCUACGUUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-31481 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20636:391-548 | . | 366 | 0.80 | CAUUUUUAAUUUUAGAUCUCGG | | siRNA22 | ShortStack |
| gba-b1.0r1-31551 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20679:24767-25243 | . | 4,123 | 9.05 | UGCUCGGAACAACUUUAACAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-31552 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20679:26224-26586 | - | 984 | 2.16 | AAGGAAGUAUGUGAAGAUGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-31553 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20679:27053-27080 | - | 727 | 1.60 | CCUUCGGGCUGAGUCAUAUAAA | | siRNA22 | ShortStack |
| gba-b1.0r1-31809 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold20897:8165-8199 | . | 314 | 0.69 | CGUCAAAAAAGGAUUGGUGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-32151 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21137:21109-21304 | + | 2,288 | 5.02 | CGACUCACCAAGCUCAGACGUU | | siRNA22 | ShortStack |
| gba-MIRC146u-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21189:69760-69880 | + | 2 | 0.00 | GGUGUAGAUCGCCGGUAUGUUG | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-32230 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2119:37797-37902 | . | 400 | 0.88 | UUCUCACGACAAAAGGCACAUU | | siRNA22 | ShortStack |
| gba-MIR393h-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21303:62787-62924 | + | 1 | 0.00 | AUUCACAAUUUUGGAUCAUGCU | | siRNA22 | Hu_et_al_2015 |
| gba-MIR393k-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21303:62787-62924 | + | 1 | 0.00 | AUUCACAAUUUUGGAUCAUGCU | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-32398 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21492:4375-4609 | . | 2,473 | 5.43 | AAGGAGCGGUAAAAUUGACACGGG | | siRNA22 | ShortStack |
| gba-b1.0r1-32399 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21492:4875-5068 | - | 348 | 0.76 | CGGGUAACGGAUUCGCUGCUAC | | siRNA22 | ShortStack |
| gba-b1.0r1-32541 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold216:3400-3501 | + | 147 | 0.32 | UCAAGUGCGGGAAGUGGCUGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-32625 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21632:136436-136603 | - | 165 | 0.36 | UUUGGAUGCAUUUCUGAAGUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-32719 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:29868-30414 | - | 4,608 | 10.12 | UUUUGAUAGGUAGAGUAUGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-32720 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:31746-31778 | - | 501 | 1.10 | CAGCGUUCUGGGAUAAGGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-32722 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:39295-41221 | . | 18,252 | 40.07 | CGAACUUCUGGGAUUGUCUGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-32723 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:41459-44417 | - | 43,051 | 94.51 | UGGGCUGUAGAGUAGGAUGUCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-32724 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:44522-44824 | - | 1,917 | 4.21 | AAAUGGAUUUUCAUACACCUCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-32726 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:45227-45287 | - | 792 | 1.74 | AGGACAUGACUCAGCAGAUGGAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-32727 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:47640-48009 | - | 1,697 | 3.73 | UCAGCAGAUGGAUAGGAAUCUU | | siRNA22 | ShortStack |
| gba-b1.0r1-32728 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:61203-65216 | - | 45,276 | 99.39 | UGACUACUCAGAAGACUCAGAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-32729 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:65300-65767 | . | 3,250 | 7.14 | CAGAUAGUUGGUGUAGAGAUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-32730 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:72869-72899 | + | 494 | 1.08 | CAGCGUUCUGGGAUAAGGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-32732 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold21785:75140-77054 | . | 26,906 | 59.07 | CAACAUGGACCAGCUACACAGC | | siRNA22 | ShortStack |
| gba-b1.0r1-33045 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold22000:53004-53078 | . | 294 | 0.65 | UUUACACCGGUCUUCUAAUUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-33264 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold22202:5710-6070 | . | 10,949 | 24.04 | UAGAGAUUACGUUAUGGGCGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-33265 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold22202:7150-7512 | . | 8,427 | 18.50 | AUGAUUGAGAACGCGGUAAGGAGC | | siRNA22 | ShortStack |
| gba-b1.0r1-33520 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2248:189615-189642 | - | 372 | 0.82 | AACCUGUAAGGCAGAGGAGCUG | | siRNA22 | ShortStack |
| gba-b1.0r1-33681 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold22563:36587-36609 | . | 269 | 0.59 | UUUGAACACCGAAGUAAAGCCA | | siRNA22 | ShortStack |
| gba-b1.0r1-33685 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2258:62874-63002 | . | 352 | 0.77 | UGGACGAAUUUAAUGCUGCUAC | | siRNA22 | ShortStack |
| gba-b1.0r1-33776 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold22719:47493-47598 | . | 686 | 1.51 | AGUAAAUUGACCGGAACGAAAAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-33866 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2281:164-266 | . | 412 | 0.90 | AGGUUUCAUACUGUCGGGGUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-33911 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold22841:408-954 | + | 1,933 | 4.24 | UCAGAAGGAGGGAAUUGACUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-33945 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2289:344100-344620 | . | 18,551 | 40.73 | CCGGAUAUAAAAAAGAGGGUAG | | siRNA22 | ShortStack |
| gba-b1.0r1-33946 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2289:346402-346719 | . | 9,529 | 20.92 | UAGUUUGAUCGGGUCAGCGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-33947 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2289:356325-356494 | + | 16,727 | 36.72 | UGGGAAUUCGAGGAAACGUGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-33950 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold229:50949-50991 | - | 250 | 0.55 | CAUUCAGAGCGGCUGACUCCAU | | siRNA22 | ShortStack |
| gba-MIR479a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2292:193198-193284 | . | 339 | 0.74 | CGUGAUAUUGGUUCGGCUCAUC | miR479 | siRNA22 | Hu_et_al_2015 |
| gba-MIR479c-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2292:193198-193284 | . | 339 | 0.74 | CGUGAUAUUGGUUCGGCUCAUC | miR479 | siRNA22 | Hu_et_al_2015 |
| gba-MIRC80ad-m4 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2295:324392-324508 | - | 1 | 0.00 | AAAUUAUUAUGAUCACACGGCC | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-34251 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold23205:14545-14608 | - | 382 | 0.84 | AAUUCCUUAUAUGUCAUUCAUG | | siRNA22 | ShortStack |
| gba-b1.0r1-34305 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2329:21980-22309 | - | 1,346 | 2.96 | UCGAGUAUUCUGAAUAGACCAGU | | siRNA22 | ShortStack |
| gba-b1.0r1-34592 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2342:248591-248623 | + | 1,736 | 3.81 | CACCUCGUCAAAAAAAGAUUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-34609 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold23453:49145-49649 | . | 607 | 1.33 | CAUAGAAUGGAGAGGUAGAAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-34660 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold23517:14072-14138 | . | 3,862 | 8.48 | UCUGUGUAAGUGGAAGGAACAU | | siRNA22 | ShortStack |
| gba-b1.0r1-34735 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2359:360226-360286 | - | 331 | 0.73 | UUCGUACUGUGUACUGGGUGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-34932 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold23760:28415-28569 | . | 164 | 0.36 | UCUUGACAUACUUGUAGAAAUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-34933 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold23760:28656-28839 | - | 1,322 | 2.90 | AAAGCUUUGCAGACUUUGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-34966 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold23811:130-161 | - | 1,020 | 2.24 | AUUUUCUCCGGUUGUAAAGAUGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-34994 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold23837:11684-11870 | . | 17,467 | 38.35 | UGUCUAGAACCGAGACUGCAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-35053 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2387:229567-230010 | - | 3,265 | 7.17 | AGAUAAGUAGAGAUAGACAGAG | | siRNA22 | ShortStack |
| gba-b1.0r1-35193 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold23951:141496-143776 | + | 54,817 | 120.34 | AUGGAAGGACAAGAAGACAGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-35269 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold24028:1-49 | + | 1,627 | 3.57 | UGGAAUUAAAGAUUGUUGAGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-35450 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2416:124828-124944 | - | 242 | 0.53 | CAAAUACAGUAUGAGCGGUUUG | | siRNA22 | ShortStack |
| gba-b1.0r1-35647 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2426:310671-310716 | - | 1,121 | 2.46 | GACUGGCAAGAAAAUCAAACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-35672 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold243:858-1201 | - | 4,457 | 9.78 | CGAGAGACCGUAAUUUACCCCC | | siRNA22 | ShortStack |
| gba-b1.0r1-35673 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold243:4802-5189 | . | 17,863 | 39.22 | CCAAAACAUCGGGGUUCUGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-35674 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold243:7000-7550 | . | 19,092 | 41.91 | GAGAAAAAGCCAUCAGAGACUU | | siRNA22 | ShortStack |
| gba-b1.0r1-36087 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold24897:7823-8262 | - | 1,501 | 3.30 | CUGGAUAAUAGUUAGAUAGAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-36088 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold24897:30315-30671 | + | 2,555 | 5.61 | UAGAGACUUUCACAAUCGACGC | | siRNA22 | ShortStack |
| gba-b1.0r1-36132 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2492:89121-89262 | - | 3,497 | 7.68 | ACUGAGAUAUCGUUAGCGACAU | | siRNA22 | ShortStack |
| gba-b1.0r1-36212 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2500:69571-69685 | . | 537 | 1.18 | UUGACUAAUCUGGAUAGAAUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-36213 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2500:70225-71321 | . | 23,892 | 52.45 | GGGAUAUGUGAUUCAAUGGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-36214 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2500:71642-72918 | . | 88,924 | 195.22 | UGGACCAUGCAGAAGCCGCCG | | siRNA22 | ShortStack |
| gba-b1.0r1-36215 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2500:86453-86606 | + | 1,275 | 2.80 | CAAGCUAUCGGGUUCAGGCACA | | siRNA22 | ShortStack |
| gba-b1.0r1-36230 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2500:237395-237439 | . | 3,024 | 6.64 | UGCAGUCAGAAUGCAGAGACGA | | siRNA22 | ShortStack |
| gba-b1.0r1-36389 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2529:81200-81360 | - | 10,432 | 22.90 | AGGAGCUUGAGGACGCAUUACACA | | siRNA22 | ShortStack |
| gba-b1.0r1-36621 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold25585:8768-8807 | + | 615 | 1.35 | UCUAGCAUGUGGAAUAAAUCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-36746 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold25700:85799-86192 | . | 5,090 | 11.17 | CACAGAGAUCGGUAUCUACAGC | | siRNA22 | ShortStack |
| gba-MIR8709l-m3 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold25725:635-982 | + | 2 | 0.00 | AUUGGUAGGGAUAAAUUUUAAAAU | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-36852 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2583:135118-135154 | + | 443 | 0.97 | CUAACACAAGGACUAACACAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-36867 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2586:277379-277526 | . | 277 | 0.61 | UCUGGUUUUGAGAGUGGUGAAGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-36936 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2591:308056-308168 | + | 718 | 1.58 | UUCCAGGACAGUUUGAUCGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-36937 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2591:308527-308721 | . | 167 | 0.37 | CAGUAAUCGGUUUUGAAUGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-37088 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold26077:37424-37484 | - | 316 | 0.69 | UCGAAGGAAACGUCGGAGGCUG | | siRNA22 | ShortStack |
| gba-b1.0r1-37247 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2628:28914-29007 | . | 458 | 1.01 | UAGAGUUUUGACUGAUGUUCGG | | siRNA22 | ShortStack |
| gba-b1.0r1-37348 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold26361:83274-83507 | . | 116 | 0.26 | AAAACUCCGAAACGAAGACAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-37405 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold26406:39233-39279 | - | 540 | 1.19 | AGAUUGAGGAGAAAAAUGGCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-37537 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2659:209901-209974 | - | 600 | 1.32 | CUCAGCCGGUAGAGCGCGUGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-37654 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold26752:4907-5089 | + | 1,072 | 2.35 | CAGACUUUGGCGAAGCAAGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-37894 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold27065:175-422 | + | 1,476 | 3.24 | UGAGGACGCAUUACACAAUUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-37895 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold27065:1811-2198 | + | 9,103 | 19.98 | UGAAAUGAUUGAGAACGCGGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-37962 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold27129:106197-106544 | . | 3,997 | 8.78 | AAAUAGAAAUUUCAAUGGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-38470 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2769:180627-180656 | + | 343 | 0.75 | UUGCUGAGUUCGUUCGGACGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-38771 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold28111:102-319 | + | 2,718 | 5.97 | UAUGGCAUAGGCGAUUGGGACA | | siRNA22 | ShortStack |
| gba-b1.0r1-38814 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold28173:15381-15405 | + | 348 | 0.76 | UAUAUUCUUCUAUCGUAGGCAC | | siRNA22 | ShortStack |
| gba-b1.0r1-39109 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2857:15941-16028 | . | 206 | 0.45 | CAGAAAACAAGGAGCCGAAGAG | | siRNA22 | ShortStack |
| gba-b1.0r1-39154 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2868:286882-286985 | . | 133 | 0.29 | UAAAUAAAGAUCGUUUUCAUGA | | siRNA22 | ShortStack |
| gba-MIR396j-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2890:392413-392549 | - | 2 | 0.00 | CAUUGUCGUUGAUGGUGUUGCA | miR396 | siRNA22 | Hu_et_al_2015 |
| gba-MIR396p-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2890:392413-392549 | - | 2 | 0.00 | AUUCAUUCAUUGUCGUUGAUGGU | miR396 | siRNA22 | Hu_et_al_2015 |
| gba-MIR396r-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2890:392413-392549 | - | 2 | 0.00 | CAUUGUCGUUGAUGGUGUUGCA | miR396 | siRNA22 | Hu_et_al_2015 |
| gba-MIR396s-m3 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2890:392413-392549 | - | 2 | 0.00 | AUUCAUUCAUUGUCGUUGAUGGU | miR396 | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-39376 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold29:71403-71428 | - | 222 | 0.49 | UUUGAACAGGGGAUCUCGAAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-39440 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2915:41221-41672 | + | 5,473 | 12.02 | UUAGAACUUCUAAGACUACAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-39441 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2915:42440-42727 | + | 12,290 | 26.98 | CGAUGAUAGACUUCCUCGGACA | | siRNA22 | ShortStack |
| gba-b1.0r1-39442 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2915:47184-47471 | . | 4,048 | 8.89 | ACGGGGCGCAGUGGGGAAGUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-39443 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2915:48158-48330 | + | 15,377 | 33.76 | CGAUGAAGCAGACAAUGAGCCC | | siRNA22 | ShortStack |
| gba-b1.0r1-39444 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2915:48411-48551 | + | 3,070 | 6.74 | GUUGAGUGAAGCGUCGGAGUUGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-39445 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2915:50218-50498 | + | 11,821 | 25.95 | CGACGAGACGAGACCGAGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-39480 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2928:86845-86869 | + | 461 | 1.01 | AGGACUUGGAAGAUGCCUUCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-39481 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2928:89228-89349 | + | 249 | 0.55 | UGGCGGAAUACGAGGCGUGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-39522 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold29367:6029-6133 | - | 1,062 | 2.33 | GAGAGUUGCCGGGAGUUUUUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-39640 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2954:19096-19148 | - | 677 | 1.49 | UUUUUAAUUUUAGAUCUCGGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-39641 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2954:20874-20926 | - | 378 | 0.83 | UAUUUAUUUUAAGGUCCGGGCA | | siRNA22 | ShortStack |
| gba-b1.0r1-39781 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold29723:1776-2046 | . | 322 | 0.71 | CAUAGAUUUGACCCUUGGCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-39826 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2978:112146-112249 | . | 264 | 0.58 | CAAAUACUACUUCUGAGACAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-39847 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2983:136074-136387 | . | 2,336 | 5.13 | CGAGCAGGUCUACGAAUUUCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-39848 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2983:136480-136656 | . | 1,819 | 3.99 | AUGGUGAGUUAGAAGAGGAGAUCA | | siRNA22 | ShortStack |
| gba-b1.0r1-39919 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold2994:211939-212322 | + | 8,827 | 19.38 | GAAGACAAUGCAGCUGUACGAGUG | | siRNA22 | ShortStack |
| gba-b1.0r1-39975 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold30067:1537-1585 | + | 248 | 0.54 | CAAAUACAGUAUGAGCGGUUUG | | siRNA22 | ShortStack |
| gba-b1.0r1-40033 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3012:90013-90656 | - | 11,488 | 25.22 | CGGACUUGGAAAGAGAGGUAUG | | siRNA22 | ShortStack |
| gba-b1.0r1-40036 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3012:95961-96163 | . | 386 | 0.85 | CGAGUUUCUUUCGUUGACGAG | | siRNA22 | ShortStack |
| gba-b1.0r1-40039 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3012:96960-97236 | . | 368 | 0.81 | CGAAGCUGCUAGAUCUAAGGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-40042 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3012:111228-111703 | . | 23,019 | 50.53 | UGAGAGAUUUUUGGAGGACGA | | siRNA22 | ShortStack |
| gba-b1.0r1-40045 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3012:120061-121221 | . | 2,070 | 4.54 | CUCCAGAACUCGUAGGUCACC | | siRNA22 | ShortStack |
| gba-b1.0r1-40094 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3012:668198-668349 | - | 3,805 | 8.35 | CAAUCGGUUAAUUAGAUGGCA | | siRNA22 | ShortStack |
| gba-b1.0r1-40104 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold30149:18276-18431 | + | 191 | 0.42 | UUGGUUAGGAUAAAAUGGUGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-40105 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold30149:18993-19107 | . | 247 | 0.54 | CGGGUUGAGAACUAGAGGGUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-40238 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3029:486600-486921 | . | 74,901 | 164.43 | UGAGGCGGUUACUGAUUUGUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-40239 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3029:487400-487720 | + | 48,336 | 106.11 | UGUAGAUGUCCAGAAGCUCGAG | | siRNA22 | ShortStack |
| gba-b1.0r1-40269 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3032:51438-51464 | + | 144 | 0.32 | UUCGUUGAAGGAGAUAGUUGUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-40270 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3032:52313-52406 | + | 298 | 0.65 | CGAGCAGGCUUACAAAUCUCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-40272 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3032:53944-54141 | . | 775 | 1.70 | UUCUCACGACAAAAGGCACAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-40316 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3036:57870-57938 | + | 239 | 0.53 | CGAGGGCGCGAUUUCAUAAAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-40345 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold30436:955-1091 | - | 849 | 1.86 | UCUCCGAGUGUAUGAACGACCU | | siRNA22 | ShortStack |
| gba-b1.0r1-40346 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold30436:1184-1431 | . | 897 | 1.97 | UACCGAACAUCAGUCAAAACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-40347 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold30436:2321-2918 | . | 1,233 | 2.71 | UCUGGAGUAAAGGGAUUUCGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-40412 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3048:709492-709522 | - | 298 | 0.65 | AGUAAGAGAUGGUUAGGCCUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-40423 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3050:226204-226357 | . | 492 | 1.08 | AAGAUACAACUGCAGAAGUCUU | | siRNA22 | ShortStack |
| gba-b1.0r1-40580 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3075:218013-218192 | + | 1,194 | 2.62 | UAUAUGGCUUUACUUCGGUGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-40581 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3075:219569-219824 | + | 2,318 | 5.09 | AAAAACAGAUAGAGCAAAUGGAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-40582 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3075:220165-220367 | - | 11,253 | 24.70 | ACCUCUCGGAUUUGAAGCACGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-40699 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3090:648422-648634 | - | 1,019 | 2.24 | GCCUUGUCCAUAAUGUAAUCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-40702 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3090:650833-650866 | - | 807 | 1.77 | UGGAUCAGAAUCGACGCUCUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-40738 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3095:157513-157811 | . | 312 | 0.69 | CAGGGUAGUGGAUUCAAUCGUG | | siRNA22 | ShortStack |
| gba-b1.0r1-40812 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3103:40399-40421 | - | 107 | 0.24 | AUACCGAUGGUGUGUGCGCUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-40846 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3110:5105-5171 | . | 1,038 | 2.28 | GUAGAUUCUGUCGACUUGACUC | | siRNA22 | ShortStack |
| gba-MIRC144c-m3 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold31415:25463-25711 | . | 10 | 0.02 | GUUAAUUCUGAUACAAUUUGGACC | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-41209 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold316:118819-118946 | + | 253 | 0.56 | CAAUCUAGCAUUGGACAACAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-41256 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold31628:138372-138404 | + | 1,400 | 3.07 | UGACUCCUAGAACAACGGCCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-41403 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold31926:202-321 | - | 1,926 | 4.23 | UGAGCCUCGUGAUCGUCCGUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-41526 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3218:62760-62874 | + | 221 | 0.49 | UGAAGUUGGGACAUGCCAGUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-41573 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold322:160673-160713 | + | 798 | 1.75 | CAGAUUCAAAGGCUACCAGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-41615 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3223:3619-3733 | + | 373 | 0.82 | UUCAGUUACUGUCAUAUUGCCC | | siRNA22 | ShortStack |
| gba-b1.0r1-41731 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3243:75371-75523 | . | 253 | 0.56 | CAGACUUUAGCUUAGUUGGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-41735 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3243:101419-101733 | . | 792 | 1.74 | UUCGUAUUGUGAAUUGUUGGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-41737 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3243:102218-102253 | + | 174 | 0.38 | UUCUCACGACAAAAGGCACAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-41746 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold32432:1-3951 | . | 58,655 | 128.77 | UGAGCAAGAUAUGUAGAGGUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-41896 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold32636:7833-7903 | + | 307 | 0.67 | CACCGGAACAUGGACUUAAACU | | siRNA22 | ShortStack |
| gba-b1.0r1-41897 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold32636:10617-11513 | . | 844 | 1.85 | CCAAGCUUGAAAGACUCCUGGA | | siRNA22 | ShortStack |
| gba-b1.0r1-42151 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold329:235211-235249 | - | 416 | 0.91 | UCAAGAUUUUGAAGAUAACACA | | siRNA22 | ShortStack |
| gba-b1.0r1-42152 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold329:235337-235391 | - | 1,512 | 3.32 | AUUUCCUGUACAUUCUUUGAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-42153 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold329:239004-239048 | - | 2,401 | 5.27 | CUAGAAAAACUUGAACAGCUCC | | siRNA22 | ShortStack |
| gba-b1.0r1-42154 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold329:244400-244438 | - | 706 | 1.55 | UGGAUGCAUGACAUUUCAACUG | | siRNA22 | ShortStack |
| gba-b1.0r1-42389 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3302:122871-122894 | - | 124 | 0.27 | AAAGUUGUUAUCUGGGCGUUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-42510 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold33271:111-370 | - | 5,481 | 12.03 | UGAAAUGAUUGAGAACGCGGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-42531 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold33334:74-101 | + | 402 | 0.88 | UCUUUAAGGUGGAGAUUGUUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-42612 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3344:179605-179632 | - | 297 | 0.65 | UUAAGUUCCGAAGGCCUUUGUG | | siRNA22 | ShortStack |
| gba-b1.0r1-42760 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold337:117926-117951 | - | 285 | 0.63 | ACGUAUCAGAGGGCCAUGGUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-42772 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold33728:13616-14022 | . | 1,649 | 3.62 | AUAUUACUAAUGGAUCUUCGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-42922 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3392:76387-76531 | . | 324 | 0.71 | UCGAUUCUCUCGUUGGACUAAA | | siRNA22 | ShortStack |
| gba-b1.0r1-42996 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3408:2941-2997 | + | 877 | 1.93 | UUCCGUUUGAAGGUCUGUUAUG | | siRNA22 | ShortStack |
| gba-b1.0r1-43102 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold34286:1247-1386 | - | 495 | 1.09 | CGUCAAAAAAGGAUUGGUGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-43162 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3447:73732-73993 | . | 576 | 1.26 | CGGACUUCUUGAUAAAGUGGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-43279 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3460:306953-307134 | . | 759 | 1.67 | UCAAGUGCGGGAAGUGGCUGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-43369 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold34707:242-343 | . | 227 | 0.50 | AGGUUUUUGGACACGGGUUUGGGA | | siRNA22 | ShortStack |
| gba-b1.0r1-43387 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold34781:15479-15631 | + | 2,169 | 4.76 | GCACCGGAUCCAAUCAGAACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-43426 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3483:133168-133295 | - | 303 | 0.67 | CGAGGGCGCGAUUUCAUAAAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-43441 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3484:54036-54142 | + | 3,981 | 8.74 | ACCGUACACGGCGGUCGGACCU | | siRNA22 | ShortStack |
| gba-b1.0r1-43464 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3485:12646-12750 | . | 536 | 1.18 | UCAACCAUGAUGAAGAACGAGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-43838 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3551:236744-236850 | + | 284 | 0.62 | AAAGACGUUGGAGAAGAUGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-44167 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold36:58029-58061 | - | 2,380 | 5.23 | UAAGAAUUCUGAUAUGCUCGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-44170 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3600:28128-28159 | + | 1,069 | 2.35 | UCCAUAAGUAAACUCGGACUCA | | siRNA22 | ShortStack |
| gba-b1.0r1-44186 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3610:136351-136601 | . | 2,796 | 6.14 | AAAGCUUUGCAGACUUUGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-44237 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold36185:81958-82268 | . | 1,577 | 3.46 | CGAUUUGCUGACGUGGGAUGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-44338 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3625:159684-159762 | - | 1,497 | 3.29 | GUGGAAAUGAAUGGGAAGCUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-44502 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3653:1980-2033 | . | 305 | 0.67 | UUUUAAUUAUGCAUGCAUGUACU | | siRNA22 | ShortStack |
| gba-b1.0r1-44575 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3667:54815-55300 | + | 4,189 | 9.20 | UAGAAAGACAGCUUGUAGUGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-44576 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3667:55453-55491 | . | 159 | 0.35 | CACUCACAAUAGAUACACGCAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-44578 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3667:59100-59255 | + | 1,047 | 2.30 | UGGACACGGGUUUGGGACACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-44595 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold367:218-249 | . | 133 | 0.29 | CUCUCGAAUAAAAUGGUCUGGUG | | siRNA22 | ShortStack |
| gba-b1.0r1-44596 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3670:33229-33288 | - | 479 | 1.05 | AGGCAGUGGUACAAAUGAUUUGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-44608 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3676:374989-375072 | . | 274 | 0.60 | CAGACGAGGGUAAAAUUUGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-44652 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold36862:1-244 | + | 2,507 | 5.50 | AGAUAAGUAGAGAUAGACAGAG | | siRNA22 | ShortStack |
| gba-b1.0r1-44653 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold36862:321-436 | + | 600 | 1.32 | CGCGGCCUGACAUUUCACAAGC | | siRNA22 | ShortStack |
| gba-b1.0r1-44680 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3703:319885-319917 | - | 250 | 0.55 | UCCUCGCGAGCACGGAUAGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-44684 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold37050:1501-1576 | . | 230 | 0.51 | UCAGACAGGUCGAAAGGUCAAA | | siRNA22 | ShortStack |
| gba-b1.0r1-44697 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold37074:269-551 | + | 1,113 | 2.44 | UCUGUGGAAGAACUAUACUUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-44838 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3754:600-807 | - | 1,500 | 3.29 | AUUGGAUUGUACCCCCCGAGAG | | siRNA22 | ShortStack |
| gba-MIRCS227a-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold37579:29019-29157 | + | 71 | 0.16 | UUCACAUGUUGAAUUACUUGGC | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-44932 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3771:70961-71187 | . | 2,625 | 5.76 | AGGAGGCCAGACAGUUGUUUUAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-44940 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3771:571701-571881 | + | 416 | 0.91 | UUUCAUGAGAAUUACUGGGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-44972 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3777:18974-19078 | + | 1,031 | 2.26 | GAGAGUUGCCGGGAGUUUUUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-44991 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3781:220050-220247 | . | 585 | 1.28 | UCUUGAAGAAGAUAUCUGGCUU | | siRNA22 | ShortStack |
| gba-b1.0r1-44993 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3781:220764-220816 | . | 24 | 0.05 | ACUAAAGAGAAUGAAGCUGAAGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-45088 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3791:332757-332877 | - | 119 | 0.26 | UUAAUAAUUUUUGUUCGUUGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-45219 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold380:131173-131198 | + | 680 | 1.49 | AGAACGACUCUCGGCAACGGAA | | siRNA22 | ShortStack |
| gba-MIR7492f-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold380:222766-222844 | + | 2 | 0.00 | AAAGGUCAUGUUCUUUUCGGCGU | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-45476 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3845:97983-98056 | . | 511 | 1.12 | UCUUUCGCAGAAGCUGUUGAUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-45486 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3845:396923-396959 | - | 750 | 1.65 | CGGAGUUUGAGAAGUAUAACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-45535 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold385:599556-599677 | . | 158 | 0.35 | AUUUUCGAGAACGAGCUUGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-45564 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold38528:1733-1771 | + | 481 | 1.06 | CAGUGUAGAAUAGUCUGGGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-45565 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold38528:7478-7501 | - | 491 | 1.08 | CAGUGUAGAAUAGUCUGGGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-45609 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold38627:30060-30117 | - | 354 | 0.78 | UGGUGGAGGUAUUUGUGGUUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-45611 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold38627:31763-31998 | - | 1,335 | 2.93 | UGCUAUCUUGACUUGUCGGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-45615 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3863:237450-237526 | . | 216 | 0.47 | CCGAAGACAAUGCUCAAGUAA | | siRNA22 | ShortStack |
| gba-b1.0r1-45616 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3863:237885-238055 | . | 601 | 1.32 | UUGCAAAUAGGAUCAUACUGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-45633 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3867:54011-54106 | . | 1,026 | 2.25 | UCGAUAUAAUGCCCAAGACUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-45859 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3896:101986-102077 | - | 746 | 1.64 | UAAAUUUGAUUGUUGUUACCAC | | siRNA22 | ShortStack |
| gba-b1.0r1-46032 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3927:390851-391122 | + | 13,599 | 29.85 | AAGGAAUUACAAGAGCAGUUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-46217 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3961:152287-152535 | . | 949 | 2.08 | UUUUUUAAAAAGAGAUCGUAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-46218 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3961:171925-172220 | . | 264 | 0.58 | UAAAAGUAACAAUAAUGAUAGU | | siRNA22 | ShortStack |
| gba-MIR7510ae-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold39704:3697-3784 | - | 1 | 0.00 | ACAUGACCUUUAGCGGCACUUA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-46342 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3985:222919-223290 | + | 20,545 | 45.10 | UAAGUGAAGAAAGAGGUAGGUU | miR8633 | siRNA22 | ShortStack |
| gba-b1.0r1-46366 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold3990:217907-217936 | - | 290 | 0.64 | UUUUUAUCAUCUCGGGACACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-46375 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold39944:800-878 | . | 192 | 0.42 | AUAGACAAGUGGCUCAAGGAGGUU | | siRNA22 | ShortStack |
| gba-MIR7506aw-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4012:3395-3472 | - | 1 | 0.00 | UCUGGGACAUGCGUCGGCCACA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-46571 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold40297:1-210 | - | 343 | 0.75 | UUGUUUGUGAUUGCAUGGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-46675 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4059:19262-19287 | + | 120 | 0.26 | CUGCACGGACCAUAAUGAUUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-46715 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold40699:1213-1420 | - | 1,072 | 2.35 | CACAGAGAUCGGUAUCUACAGC | | siRNA22 | ShortStack |
| gba-b1.0r1-46802 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4091:104550-104744 | - | 658 | 1.45 | UGAGCCUCGUGAUCGUCCGUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-46937 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4113:9787-10022 | . | 877 | 1.93 | AGGACUAACACAGAGAGACUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-46941 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4113:26551-26815 | . | 451 | 0.99 | CUUAAAUAAGAUCGAAGAACUG | | siRNA22 | ShortStack |
| gba-b1.0r1-46942 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4113:30452-30862 | . | 924 | 2.03 | UCGAUACAGGAUCUCGUCGGGU | | siRNA22 | ShortStack |
| gba-b1.0r1-46943 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4113:35305-35582 | . | 1,711 | 3.76 | AUCUCGGUGGGUUCUUACGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-47110 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4137:358809-358831 | . | 698 | 1.53 | GCCGAGUAUGAAAUAGUGACUG | | siRNA22 | ShortStack |
| gba-b1.0r1-47209 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4164:24334-24541 | . | 1,565 | 3.44 | AUCCUUCGGGCUGAGUCAUAUAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-47213 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4164:137146-137279 | + | 564 | 1.24 | AUUGAGCCGUCGUGAUUUUUCA | | siRNA22 | ShortStack |
| gba-b1.0r1-47259 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold417:176463-176543 | + | 182 | 0.40 | UUACCAUAAGGAUCUGUUUGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-47634 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold426:145896-146058 | - | 665 | 1.46 | CUUUUUAACGAGGAGUGGAGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-47766 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4281:56021-56387 | + | 740 | 1.63 | CUGGAAUCGGAUCGGGGUCAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-47767 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4281:57001-57047 | + | 197 | 0.43 | UGAGAAGGACAAGGCGAAGGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-47859 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold42974:4443-4488 | - | 811 | 1.78 | UUGAAGUUCAGAUUGAAAGGUC | | siRNA22 | ShortStack |
| gba-b1.0r1-47899 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold43072:8338-8505 | . | 474 | 1.04 | UCUGAUGUAGCUGUGUAGGCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-47900 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold43072:8676-8922 | - | 608 | 1.34 | CAAGAGGAGCAGGUCUUUGCUG | | siRNA22 | ShortStack |
| gba-b1.0r1-47959 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4309:392401-392635 | + | 4,258 | 9.35 | UGAACUAUUUGUUGAUCGUUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-47960 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4309:392722-393165 | . | 572 | 1.26 | AUUGGAUGCCAUUAUAAAGAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-47996 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4318:136032-136251 | - | 5,889 | 12.93 | UCAAGCAGUACUCUGACAGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-48084 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4341:18535-18569 | + | 1,496 | 3.28 | UAGUUGAGAGAACCUGUAAGGCA | | siRNA22 | ShortStack |
| gba-b1.0r1-48095 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4348:9643-9706 | + | 195 | 0.43 | AUGGACGGAUGGAAGAAGGAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-48219 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold43674:815-1108 | + | 382 | 0.84 | CACAGGUAGGAUGGAUGAUUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-48381 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold441:127100-127302 | + | 644 | 1.41 | UUAGACCGAGGCCGAAGCUUAG | | siRNA22 | ShortStack |
| gba-b1.0r1-48394 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4417:16365-16421 | - | 204 | 0.45 | CAGAAGGAGGGAAUUGACUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-48402 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4417:178422-178624 | . | 463 | 1.02 | CGAAUUCCGGCAUUUUGAACUU | | siRNA22 | ShortStack |
| gba-b1.0r1-48403 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4417:180368-180611 | . | 235 | 0.52 | UCGAUACAGGAUCUCGUCGGGU | | siRNA22 | ShortStack |
| gba-b1.0r1-48595 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold44484:5824-6069 | + | 196 | 0.43 | CGGUUGGUAGUUCAUUAGGUGU | | siRNA22 | ShortStack |
| gba-b1.0r1-48664 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold44571:1-188 | . | 6,453 | 14.17 | AUACUUCUUGUGUGACUGUUGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-48665 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold44571:283-2229 | - | 32,208 | 70.71 | ACGGAGUGAGAAAAAAGAGAAGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-48742 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold44688:1397-1561 | + | 472 | 1.04 | GUAUGUGGAUUGUUCAUCAGGUUG | | siRNA22 | ShortStack |
| gba-b1.0r1-48752 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4470:298663-298845 | + | 345 | 0.76 | CCUGAACCAAUGGAUACUGAAC | | siRNA22 | ShortStack |
| gba-b1.0r1-48987 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold452:252821-253234 | + | 4,285 | 9.41 | UUCUUUUUGAAUUGUCUUGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-48988 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold452:253269-253336 | + | 71 | 0.16 | ACCUGCUAGAUAUGAAGGUAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-48989 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold452:253865-253910 | . | 158 | 0.35 | CAGAGAAGACCCGAUAUGACAC | | siRNA22 | ShortStack |
| gba-b1.0r1-48990 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold452:254141-254178 | + | 345 | 0.76 | UCAAGACAGUUUAUACCCGCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-49120 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4539:289432-289609 | + | 585 | 1.28 | AUAGUGACUGCAAAAUUGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-49133 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4542:63196-63231 | . | 483 | 1.06 | UCGGAAUAAACUCGGAGGCAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-49251 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4568:146333-146395 | - | 630 | 1.38 | CAGGUUGAAGGAGUGAUAAUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-49442 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold460:240759-240869 | - | 228 | 0.50 | UUCAUGAUCAUCAGACCACCC | | siRNA22 | ShortStack |
| gba-b1.0r1-49629 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4622:199316-199554 | - | 1,011 | 2.22 | UCCACCCCGGACUCAACGGCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-49683 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold46265:7460-8354 | . | 5,037 | 11.06 | UGACGGAGAACUCUAACCUUUU | | siRNA22 | ShortStack |
| gba-b1.0r1-49694 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4633:14961-15117 | + | 788 | 1.73 | CAGUAUGAGCGGUUUGUCUGGG | | siRNA22 | ShortStack |
| gba-b1.0r1-49695 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4633:22837-22980 | + | 4,938 | 10.84 | ACCUCUCGGAUUUGAAGCACGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-49696 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4633:23874-24108 | . | 1,105 | 2.43 | UGGAAAAAUGGAUGGCAAUUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-49697 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4633:24392-24478 | - | 1,704 | 3.74 | UAUAUGGCUUUACUUCGGUGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-49814 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4637:118055-118235 | - | 226 | 0.50 | AUCAGGCUAAAGAACAGGUCAG | | siRNA22 | ShortStack |
| gba-MIRC112v-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4669:220331-220519 | - | 1 | 0.00 | UCACACACGGCUUAUACACACA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-50023 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold46734:15326-15421 | + | 466 | 1.02 | CAGUGUAGAAUAGUCUGGGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-50094 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4691:427810-428533 | . | 498 | 1.09 | CGGACUCAGAGUAAAUAUCGGA | | siRNA22 | ShortStack |
| gba-b1.0r1-50095 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4691:428591-429040 | . | 447 | 0.98 | CAAAAUGAACUGCAGAGAUGGG | | siRNA22 | ShortStack |
| gba-b1.0r1-50096 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4691:429191-429447 | . | 172 | 0.38 | CGACAACGGCAUCCUCUAACACA | | siRNA22 | ShortStack |
| gba-b1.0r1-50101 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold46913:1-48 | + | 4,172 | 9.16 | GGAGAGAUGGCUGAGUGGACUA | | siRNA22 | ShortStack |
| gba-b1.0r1-50237 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4710:192150-192278 | . | 530 | 1.16 | CCAUCGGCGCCACCGUACACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-50281 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4722:58591-58755 | - | 544 | 1.19 | UCCGAACGAACUCGGCAAACCA | | siRNA22 | ShortStack |
| gba-b1.0r1-50554 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4774:67000-67028 | + | 149 | 0.33 | CAUCUCAUUAUGUUCUGUCGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-50636 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4806:35478-36109 | . | 1,543 | 3.39 | CAAGGGCAGAAGAUUCGAGGGU | | siRNA22 | ShortStack |
| gba-b1.0r1-50650 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4806:95873-96058 | . | 596 | 1.31 | UAAGUCCAAAGGGAGACCCGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-50651 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4806:96882-97114 | + | 1,093 | 2.40 | UUUGGAUGCAUUUCUGAAGUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-50767 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold4832:393867-394051 | + | 827 | 1.82 | UUGCAAAGAAAGAUGGAUCUCC | | siRNA22 | ShortStack |
| gba-b1.0r1-51013 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold48856:4390-4526 | . | 422 | 0.93 | UGGACGAAUUUAAUGCUGCUAC | | siRNA22 | ShortStack |
| gba-b1.0r1-51803 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5044:128462-128715 | . | 424 | 0.93 | UGCAGAGCCCUGACAUCGAGGA | | siRNA22 | ShortStack |
| gba-b1.0r1-51804 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5044:129038-129158 | . | 537 | 1.18 | AGCGAAUAAAGAAAUAUGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-51807 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5044:137818-138041 | . | 1,460 | 3.21 | UGCGAUUAUGAUUACGUUGGUC | | siRNA22 | ShortStack |
| gba-MIRCS228a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5081:888189-888353 | - | 28 | 0.06 | UUCAGGAUAGUUUGAUCGGGUC | | siRNA22 | Hu_et_al_2015 |
| gba-MIRC118a-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5118:86994-87140 | + | 14 | 0.03 | UUACGACUAGUUAUGAUGCAUU | | siRNA22 | Hu_et_al_2015 |
| gba-MIRC118b-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5118:86994-87140 | + | 14 | 0.03 | UUACGACUAGUUAUGAUGCAUU | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-52310 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5126:69643-70263 | . | 1,153 | 2.53 | UACAUAUUCGAACUUGUGGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-52361 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5140:1-114 | . | 477 | 1.05 | CAGACGAGGGUAAAAUUUGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-52688 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5204:296707-296814 | + | 839 | 1.84 | UCGACGACUCACCAAGCUCAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-52744 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5213:112511-112739 | - | 2,665 | 5.85 | UUUCCGUAGAGCUCUUACCAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-52767 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5215:157484-157518 | + | 170 | 0.37 | CGAAGCUGUGACUCAAGUGCGG | | siRNA22 | ShortStack |
| gba-b1.0r1-52965 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold52443:6239-6343 | - | 1,194 | 2.62 | CGUACACGGCGGUCGGACCUCA | | siRNA22 | ShortStack |
| gba-b1.0r1-53044 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5279:78624-78665 | + | 706 | 1.55 | UUCAAGACUAGAACCACGUCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-53045 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5279:79059-79215 | . | 952 | 2.09 | UUCCACUUGAGCUGAGACGUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-53319 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5342:7468-7787 | . | 401 | 0.88 | UACCGAACAUCAGUCAAAACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-53322 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5342:8869-9041 | . | 383 | 0.84 | UUUGCAAAGAAAGAUGGAUCUCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-53323 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5342:9412-9536 | + | 1,636 | 3.59 | UGGAGAUAAGUAGAGAUAGACA | | siRNA22 | ShortStack |
| gba-MIRCS117a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5360:171167-171350 | . | 3 | 0.01 | ACGGAAAGAGCCAGUUCGCUCU | | siRNA22 | Hu_et_al_2015 |
| gba-MIRCS117a-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5360:173525-173708 | + | 2 | 0.00 | ACGGAAAGAGCCAGUUCGCUCU | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-53558 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5368:6245-6282 | - | 2,292 | 5.03 | CGAGACUGCAUAUAACGAACCA | | siRNA22 | ShortStack |
| gba-b1.0r1-53577 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5369:224530-224876 | . | 5,670 | 12.45 | UUGAAGAUUCUUGACUGUUGGA | | siRNA22 | ShortStack |
| gba-b1.0r1-53623 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5382:445167-445572 | . | 1,087 | 2.39 | UCAUCAGAGACUGUCCGAAAGU | | siRNA22 | ShortStack |
| gba-b1.0r1-53650 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5386:261819-261989 | + | 1,096 | 2.41 | UUAUGGUUAUGAUGUCGCUGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-53713 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5397:2628-2718 | - | 236 | 0.52 | AUUCUUACUAUAUUCUGAGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-54030 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5484:10742-10832 | . | 239 | 0.53 | CGCAUGAAUCAGACUAUACUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-54073 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5492:301349-301415 | - | 402 | 0.88 | UUAAAAAAUGGAUUACUUGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-54093 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5509:44998-45087 | + | 370 | 0.81 | UAGAUUAGGAUACAAGUGACAA | | siRNA22 | ShortStack |
| gba-b1.0r1-54117 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5521:7556-7602 | - | 1,596 | 3.50 | CGAUUUAUGCUUCUGCCACCC | | siRNA22 | ShortStack |
| gba-b1.0r1-54306 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5565:99909-100054 | . | 524 | 1.15 | GUCCAAAAUUCCUUUCGUAUUGUG | | siRNA22 | ShortStack |
| gba-b1.0r1-54307 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5565:103426-103448 | - | 193 | 0.42 | AAGAGAAGUGGAUCAUGAGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-54308 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5565:110559-110581 | + | 187 | 0.41 | AAGAGAAGUGGAUCAUGAGGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-54335 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5579:20170-20192 | + | 165 | 0.36 | AAAAGACGUUGGAGAAGAUGCA | | siRNA22 | ShortStack |
| gba-b1.0r1-54374 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5594:156444-156470 | - | 963 | 2.11 | UCUCGAGACUCAGUAGAUAUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-54515 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5626:50006-50031 | - | 83 | 0.18 | CAGACGAGGGUAAAAUUUGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-54553 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5628:151895-152071 | . | 361 | 0.79 | CAACACGGUAGGGCACGGUUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-54556 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5633:177096-177342 | . | 123 | 0.27 | CAUACUGUUUGGAUUCUAUGGG | | siRNA22 | ShortStack |
| gba-b1.0r1-54581 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold564:105868-106073 | + | 4,028 | 8.84 | UUGAGAAUGGUAGAGCAGGAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-54617 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5644:424950-425070 | . | 303 | 0.67 | UACGUGAAUGAAGACCAGCUAC | | siRNA22 | ShortStack |
| gba-b1.0r1-54666 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5658:95519-95643 | - | 514 | 1.13 | UAUGCGAUGGUGUGUACGCGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-54702 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5667:548053-548891 | . | 4,546 | 9.98 | CCCACUGUUAGAAUUCAUCAAC | | siRNA22 | ShortStack |
| gba-b1.0r1-54730 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5676:87899-88165 | + | 516 | 1.13 | UACGUACCUAGCUUGAAGAAAAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-54746 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5679:155237-155341 | - | 1,641 | 3.60 | CCAGAAGGAUCAAUAGCUGAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-54788 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5689:43642-43664 | - | 171 | 0.38 | GCCCGGUCGUACUCAUAACUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-54909 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5712:4787-4902 | + | 162 | 0.36 | UUUAGAUAUGGAUUAGGGGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-55295 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5830:203819-203855 | . | 297 | 0.65 | CUCAAAUGUUAAGGACCUUCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-55327 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5852:114258-114787 | . | 1,836 | 4.03 | AUUGCCGAACGUCGAACAUUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-55376 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold586:4965-5191 | + | 1,028 | 2.26 | CAGAAGAUGACUGUUCCAUGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-55378 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold586:7366-7546 | + | 1,041 | 2.29 | CAGAAGAUGACUGUUCCAUGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-55405 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5876:7601-7634 | - | 1,128 | 2.48 | UUUGGACAGUAGCUAGGCGAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-55416 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5877:172026-172134 | . | 270 | 0.59 | AUUAUGUUCUGUCGAAAAAUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-55552 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold593:465447-465589 | - | 873 | 1.92 | UGAAAUAGGGCAAUAUGACAGU | | siRNA22 | ShortStack |
| gba-b1.0r1-55556 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5934:205281-205417 | - | 2,423 | 5.32 | UUGUGAGACUGCCCAAGGGAAA | | siRNA22 | ShortStack |
| gba-b1.0r1-55740 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold5976:133625-133750 | + | 580 | 1.27 | AUAGUGACUGCAAAAUUGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-55822 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6008:20807-20832 | + | 1,387 | 3.05 | ACGAGCAGCUGUUGGUUCACUG | | siRNA22 | ShortStack |
| gba-b1.0r1-55823 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6008:32917-32956 | - | 563 | 1.24 | UCGGAUUGAAAAACGGGGUCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-55841 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold601:149634-149877 | + | 823 | 1.81 | UCUCCUAGAAGAACUUGCGCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-55916 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6034:136216-136371 | . | 10,247 | 22.50 | UCUGUGUAAGUGGAAGGAACAU | | siRNA22 | ShortStack |
| gba-b1.0r1-56015 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6073:232062-232151 | + | 156 | 0.34 | AAAGACUGUACAUAUAACACAA | | siRNA22 | ShortStack |
| gba-b1.0r1-56239 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6149:57393-57521 | . | 357 | 0.78 | UCAUUAUGUUCUGUCGAAAAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-56240 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6149:58378-58426 | . | 451 | 0.99 | CAGUCACUAUUUCAUACUCGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-56265 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6154:53286-53697 | - | 1,272 | 2.79 | GAAAAAGAAUCGGAGAAACUC | | siRNA22 | ShortStack |
| gba-MIR7492cr-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold616:467021-467084 | . | 5 | 0.01 | AUGGCUUUUAGCGGCGUCUGUUGG | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-56327 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6187:38168-38244 | . | 179 | 0.39 | CACACUCACAAUAGAUACACGC | | siRNA22 | ShortStack |
| gba-b1.0r1-56389 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6221:136750-136925 | . | 204 | 0.45 | UUUACAUAAGGUGGAUUACAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-56390 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6221:136991-137216 | . | 1,775 | 3.90 | UCUGACUUUGAGAAUGAUGGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-56683 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6297:55845-55890 | - | 366 | 0.80 | ACAUGGAGAUAAGUAGAGAUAGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-56738 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6305:13166-13205 | . | 659 | 1.45 | CUCAAAUGUUAAGGACCUUCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-56741 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6305:42472-42503 | - | 268 | 0.59 | CUGGAACAAUUGGAUUGGCAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-56807 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6316:415947-416055 | + | 209 | 0.46 | UCUUUCGCAGAAGCUGUUGAUG | | siRNA22 | ShortStack |
| gba-b1.0r1-56984 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6360:37839-37966 | - | 163 | 0.36 | UACACGGCUGUGAAUUCUCUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-57046 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold637:382586-382657 | - | 715 | 1.57 | AAGGCAUUGAAUGAGUUAAUAU | | siRNA22 | ShortStack |
| gba-b1.0r1-57248 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6424:72818-72920 | - | 944 | 2.07 | UUUAAAAAGGCGGUGGAAAGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-57249 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6424:74796-74861 | - | 452 | 0.99 | CUUAAAUAAGAUCGAAGAACUG | | siRNA22 | ShortStack |
| gba-b1.0r1-57253 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6428:7057-7085 | - | 4,384 | 9.62 | UCCAUUAGAAUUUUGUUAGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-57258 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold643:83169-83227 | + | 945 | 2.08 | AUGGAGAAGAAAUCGUCAGGGG | | siRNA22 | ShortStack |
| gba-b1.0r1-57333 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold645:4499-5069 | . | 741 | 1.63 | UUUGGACUAGGCUGCUCGGGAGA | | siRNA22 | ShortStack |
| gba-b1.0r1-57631 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6539:146971-147084 | - | 351 | 0.77 | UGGAUACAUUCGGCUGGGGCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-57737 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6563:462702-462920 | . | 1,265 | 2.78 | CAACGAUGGAGAGAAGUGGCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-57751 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6574:13676-13777 | . | 362 | 0.80 | UCACGACAAAAGGCACAUUCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-57769 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6580:210428-211328 | + | 2,771 | 6.08 | UUUUGUUUUUAUCUGGAUGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-57917 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold661:62227-62375 | - | 454 | 1.00 | UUGGGAACUGAUGAGGAUGGAG | | siRNA22 | ShortStack |
| gba-b1.0r1-58003 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6652:5185-5482 | + | 2,679 | 5.88 | UUUUAAUUUUAGAUCUCGGACAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-58054 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6669:21311-21340 | - | 272 | 0.60 | CAAGAGUAGAUAAAUAAAAGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-58394 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold673:294675-294772 | - | 994 | 2.18 | UGAAGCUGCCAGCAUGAUCUAU | miR167 | siRNA22 | ShortStack |
| gba-b1.0r1-58576 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6788:311878-311927 | - | 200 | 0.44 | UGUUAUUACUCUAGAUCGUCGU | | siRNA22 | ShortStack |
| gba-b1.0r1-58577 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6788:317580-317608 | + | 148 | 0.33 | UUGAAGAAUCACGAUGGCUCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-58578 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6793:11942-12122 | . | 1,025 | 2.25 | UAUGGGAUAUGCAAUGAAUGAAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-58716 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6842:25981-26256 | - | 325 | 0.71 | UUGAAGAAUCACGAUGGCUCAA | | siRNA22 | ShortStack |
| gba-MIRCS140a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold687:285261-285333 | + | 5 | 0.01 | UGCAUGGUAUUCACAUUGGGCA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-58849 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold687:285671-285787 | . | 210 | 0.46 | UUUCCAAAAGGGGUGGCUGGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-59052 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6906:782383-782609 | . | 1,482 | 3.25 | UUUCUUAAGGGAUCUGUUAUAC | | siRNA22 | ShortStack |
| gba-b1.0r1-59132 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6931:95748-95771 | + | 422 | 0.93 | CCGAGUAUGAAAUAGUGACUGC | | siRNA22 | ShortStack |
| gba-b1.0r1-59230 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6973:336174-336542 | - | 1,668 | 3.66 | AUUUCUAUUUUCGUUUGACAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-59232 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6973:345522-346106 | . | 871 | 1.91 | CGAAGCUUUGGACGUAAGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-59301 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold6998:97386-97444 | + | 310 | 0.68 | CUAUUAACGAGUGGCCAGACAU | | siRNA22 | ShortStack |
| gba-b1.0r1-59390 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7014:47173-47452 | . | 673 | 1.48 | AACGGAUUCGCUGCUACGUUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-59406 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7019:3900-4031 | - | 442 | 0.97 | CAUACUGUCGGGGUUCUGCAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-59453 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7031:39751-39805 | + | 10,517 | 23.09 | CAGAAUGCAUGAAUAGAACUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-59674 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7092:155951-156165 | . | 7,006 | 15.38 | UUUACCCUAUUAUCGUCAUGAU | | siRNA22 | ShortStack |
| gba-b1.0r1-59675 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7092:156650-156972 | . | 64,784 | 142.22 | CUAAAGAUCUGAGCUUGGUGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-59676 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7092:158850-159119 | . | 10,873 | 23.87 | UCGGUACAAAAUUUCGUCUGGA | | siRNA22 | ShortStack |
| gba-b1.0r1-59677 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7092:159252-159570 | . | 10,511 | 23.08 | AGGAGUUUGAAAGAUGUGGCUU | | siRNA22 | ShortStack |
| gba-b1.0r1-59782 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7149:44828-45707 | . | 3,870 | 8.50 | UUGUUGUUGGCAUGCUAUCCUA | | siRNA22 | ShortStack |
| gba-b1.0r1-59974 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7201:126610-126851 | . | 1,192 | 2.62 | AUAGUGACUGCAAAAUUGGCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-59991 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7213:15396-15505 | - | 1,399 | 3.07 | GACUGAUGUUCGGUACGUGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-60297 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7298:112126-112161 | + | 448 | 0.98 | UUAACCCUAGGCUCGUAAAAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-60415 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7329:5431-5539 | . | 889 | 1.95 | AUUUUCGAGAACGAGCUUGCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-60416 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7329:23961-24068 | - | 5,560 | 12.21 | UGGAGAUAAGUAGAGAUAGACA | | siRNA22 | ShortStack |
| gba-b1.0r1-60417 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7329:24158-24406 | - | 2,031 | 4.46 | AAGGAUACAAAGAUGCUGGUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-60533 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7348:87301-87896 | . | 3,024 | 6.64 | UUUGGAGAUGGGUGGGUUGGCA | | siRNA22 | ShortStack |
| gba-b1.0r1-60762 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold739:103810-103835 | + | 450 | 0.99 | UCUGGAAGUAACCACGGAGCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-60849 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7414:64094-64390 | . | 568 | 1.25 | AAGUGAUUUUCAGCUGUUUGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-60881 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7427:432060-432141 | - | 630 | 1.38 | GACUUGGUGCCUACGGUAGAAGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-61299 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7512:39675-39714 | + | 400 | 0.88 | CCAGACAUACGGUUGGUGGCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-61300 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7512:39852-39960 | . | 363 | 0.80 | CAAGCUCGAGAUCUUCUAAUAAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-61394 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7545:66992-67036 | - | 1,092 | 2.40 | UUCAAGACUAGAACCACGUCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-61667 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7622:332144-332248 | - | 213 | 0.47 | CGCGGCCUGACAUUUCACAAGC | | siRNA22 | ShortStack |
| gba-MIR160f-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7628:30749-30852 | - | 13 | 0.03 | UGCCUGGCUCCCUGAAUGCCAU | miR160 | siRNA22 | Hu_et_al_2015 |
| gba-MIR160g-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7628:30749-30852 | - | 13 | 0.03 | UGCCUGGCUCCCUGAAUGCCAU | miR160 | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-61864 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold767:637832-637863 | + | 169 | 0.37 | AUGGUAAUGUGGAAAGGUAUAAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-62032 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7711:119946-119977 | - | 363 | 0.80 | AAGUAACUCUGAUGGUGUAAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-62138 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold776:49432-49508 | . | 134 | 0.29 | CUUACCAAGGAACACGUAACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-62166 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7772:33368-33467 | + | 237 | 0.52 | UGAAAUAGGGCAAUAUGACAGU | | siRNA22 | ShortStack |
| gba-b1.0r1-62207 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7781:14249-14364 | + | 611 | 1.34 | UAAAAUAAAUAAAGAUCGUUUU | | siRNA22 | ShortStack |
| gba-b1.0r1-62453 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7873:746795-747472 | + | 2,500 | 5.49 | UCUUUUGCGAGAUUUGUAUGAA | | siRNA22 | ShortStack |
| gba-b1.0r1-62530 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7897:90099-90129 | + | 2,554 | 5.61 | CCGGACCCUCGAACAGUGGAGG | miR8636 | siRNA22 | ShortStack |
| gba-b1.0r1-62709 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold792:270762-270797 | + | 297 | 0.65 | GCCGAGACGCAUUUUCAUACUG | | siRNA22 | ShortStack |
| gba-b1.0r1-62875 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold7973:792303-792330 | - | 222 | 0.49 | AUUGAAGAGUUAGAAGCAGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-62942 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold798:305902-306221 | . | 12,476 | 27.39 | CGAGCUUCUGGACAUCUACAUC | | siRNA22 | ShortStack |
| gba-b1.0r1-63016 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold80:147827-147887 | + | 134 | 0.29 | UCCGGCAUGCAUUCAAGGAUC | | siRNA22 | ShortStack |
| gba-b1.0r1-63080 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8022:66287-66411 | + | 271 | 0.60 | CAAGCAUGUUUAACAAGGACCA | | siRNA22 | ShortStack |
| gba-b1.0r1-63186 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8063:155501-155997 | . | 5,588 | 12.27 | GUAGAUCGUAAAUGUUUGGCUU | | siRNA22 | ShortStack |
| gba-b1.0r1-63222 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8066:222850-223291 | + | 944 | 2.07 | CAGAGAAACCAAAAUGAACAUC | | siRNA22 | ShortStack |
| gba-b1.0r1-64048 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold83:212646-212674 | - | 221 | 0.49 | AAUGGUAAUGUGGAAAGGUAUA | | siRNA22 | ShortStack |
| gba-MIR7510ap-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8302:138720-138808 | - | 2 | 0.00 | AAAGGUAAUGUUGUUUAGCGGCGC | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-64203 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8357:285035-285100 | . | 106 | 0.23 | CGACAAAAGGCACAUUCAUCUU | | siRNA22 | ShortStack |
| gba-b1.0r1-64211 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8357:364630-364708 | - | 188 | 0.41 | UGAAGUUGGGACAUGCCAGUGA | | siRNA22 | ShortStack |
| gba-b1.0r1-64455 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold841:41473-41730 | + | 2,685 | 5.89 | UUGCUAUCUCGCAGUGCGGUCU | | siRNA22 | ShortStack |
| gba-b1.0r1-64468 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold842:108847-108905 | - | 342 | 0.75 | AUGAUGAUAAUAGGGUAAACGC | | siRNA22 | ShortStack |
| gba-b1.0r1-64472 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold842:112560-112622 | - | 66,640 | 146.30 | UCGGGAAAGUAGACUUGGUGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-64473 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold842:113165-113204 | - | 2,688 | 5.90 | AAGUUCGAAGAAUCUGCUGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-64478 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold842:118810-119205 | - | 6,053 | 13.29 | UCUUUCUGAUUCUCUGAUAGACU | | siRNA22 | ShortStack |
| gba-b1.0r1-64480 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold842:121181-121255 | - | 318 | 0.70 | AGCAUACUAGCGAAAGCUCUCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-64481 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold842:121326-121358 | - | 466 | 1.02 | CUCGGUGUUGACCUUUUAGUACU | | siRNA22 | ShortStack |
| gba-b1.0r1-64482 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold842:122004-122100 | - | 489 | 1.07 | CUAGGAAGUCCAAAUCGUAUGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-64483 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold842:122359-122582 | - | 1,921 | 4.22 | GCCAUAGGUUCUUAGUCGACUU | | siRNA22 | ShortStack |
| gba-b1.0r1-64484 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold842:122721-122894 | . | 1,196 | 2.63 | UCUGGAAAAGCUCUAAAAACCU | | siRNA22 | ShortStack |
| gba-b1.0r1-64594 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold846:274215-274697 | + | 1,718 | 3.77 | CAACUUCAUUGUGACUUGGCUU | | siRNA22 | ShortStack |
| gba-b1.0r1-64598 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold846:708936-709066 | - | 222 | 0.49 | CAGCAGCAAACCUGGUAGAAGG | | siRNA22 | ShortStack |
| gba-b1.0r1-64629 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8463:449512-449537 | + | 216 | 0.47 | UUCUACACGGUGUUGAAGGAUA | | siRNA22 | ShortStack |
| gba-b1.0r1-64972 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8554:359205-359478 | . | 528 | 1.16 | CAGGGAAAUUGGAACGUCUUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-64973 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8554:360209-360323 | . | 287 | 0.63 | AGUAAAUUGACCGGAACGAAAAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-65310 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8637:525916-526004 | + | 709 | 1.56 | UCAGACUGAAGUUAUAUACGCA | | siRNA22 | ShortStack |
| gba-b1.0r1-65322 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8647:807-859 | . | 318 | 0.70 | CCAACACGGUAGGGCACGGUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-65352 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8674:26074-26327 | + | 1,475 | 3.24 | CACCUGUGGAAGUACAUAUCAG | | siRNA22 | ShortStack |
| gba-b1.0r1-65355 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8674:32185-32625 | + | 4,236 | 9.30 | CAAGCACUGCAGAAGAAUUGGU | | siRNA22 | ShortStack |
| gba-b1.0r1-65356 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8674:33126-33245 | + | 3,152 | 6.92 | AAUCAAGCCUGGACAGCCUCUG | | siRNA22 | ShortStack |
| gba-b1.0r1-65357 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8674:34591-34661 | + | 900 | 1.98 | UCAGCAAGAUUGAGAAGAACCAAA | | siRNA22 | ShortStack |
| gba-b1.0r1-65443 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8695:66044-66070 | - | 776 | 1.70 | UAAAGAAGAGUUGGCUAAAGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-65447 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold87:33956-34068 | + | 849 | 1.86 | AUGGAUUAGGGGCAUAACGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-65515 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8733:183902-184253 | + | 30,633 | 67.25 | UAAGUGAAGAAAGAGGUAGGUU | miR8633 | siRNA22 | ShortStack |
| gba-b1.0r1-65685 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8810:7134-7216 | . | 2,180 | 4.79 | CAUGCCAAACUGCUGUAGUACU | | siRNA22 | ShortStack |
| gba-b1.0r1-65810 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8828:7036-7211 | - | 1,217 | 2.67 | CCAAACCCUAGUAGAUACCCU | | siRNA22 | ShortStack |
| gba-b1.0r1-65848 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8835:42567-42702 | . | 104 | 0.23 | UUAAGAUGUAUGUAUUUAUGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-66229 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold8980:18164-18196 | + | 645 | 1.42 | CACCUCGUCAAAAAAAGAUUGG | | siRNA22 | ShortStack |
| gba-b1.0r1-66467 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9078:108553-108717 | + | 268 | 0.59 | AAAGAUUCUAACUCGAGAGGUA | | siRNA22 | ShortStack |
| gba-b1.0r1-66658 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9128:7039-7205 | - | 736 | 1.62 | UUUGCAAAGAAAGAUGGAUCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-66660 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9128:9609-9671 | . | 250 | 0.55 | CACAGAAGCUUUAGUAGUCCGA | | siRNA22 | ShortStack |
| gba-b1.0r1-66695 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9141:53198-53220 | + | 343 | 0.75 | UAAGGUGUCAUAUCGGGUGUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-66696 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9141:54802-54824 | + | 321 | 0.71 | UAAGGUGUCAUAUCGGGUGUUC | | siRNA22 | ShortStack |
| gba-b1.0r1-66772 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9157:117265-118310 | - | 2,279 | 5.00 | CGGGUAUCGGAAGGUCGUACAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-66775 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9157:124816-124937 | - | 478 | 1.05 | UGGAAGUUAGACGUAAUGUGAC | | siRNA22 | ShortStack |
| gba-b1.0r1-66779 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9157:128248-128565 | - | 859 | 1.89 | UAAUUGUGUGAUUAAUAGGACA | | siRNA22 | ShortStack |
| gba-b1.0r1-66780 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9157:128720-130287 | - | 59,699 | 131.06 | CGGAACUCGGUUACUGUGCGGU | | siRNA22 | ShortStack |
| gba-b1.0r1-67062 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9265:152461-152498 | . | 1,606 | 3.53 | AAGUACGAACCUGGCUCUGAUACC | | siRNA22 | ShortStack |
| gba-b1.0r1-67192 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9341:114309-114379 | . | 607 | 1.33 | GCCGAGUAUGAAAUAGUGACUG | | siRNA22 | ShortStack |
| gba-b1.0r1-67235 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9349:26600-26920 | . | 22,182 | 48.70 | UUCGAUAGAGGAGCACUUACGG | | siRNA22 | ShortStack |
| gba-b1.0r1-67236 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9349:27800-28020 | + | 11,865 | 26.05 | ACCAAAUUCGGACUGCCGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-67471 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9426:58957-59038 | - | 994 | 2.18 | CAAUUGAAGAAUCACGAUGGCU | | siRNA22 | ShortStack |
| gba-b1.0r1-67478 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9426:80732-83235 | + | 25,386 | 55.73 | UGAUCUGGGCUGUAUAGGAGGAUG | | siRNA22 | ShortStack |
| gba-b1.0r1-67764 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold952:353823-354070 | . | 751 | 1.65 | UGCGGCUUUGUAUUGAUUACCGGC | | siRNA22 | ShortStack |
| gba-b1.0r1-67806 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9529:61963-62116 | . | 997 | 2.19 | GAUCUGACUGUAUUUGGUGCC | | siRNA22 | ShortStack |
| gba-b1.0r1-67807 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9529:62404-62545 | + | 257 | 0.56 | CGAGGAUUCAGACAUCAAGUGGA | | siRNA22 | ShortStack |
| gba-b1.0r1-67808 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9529:62694-62913 | . | 972 | 2.13 | AAUACACAGAUUGAUCGGCACC | | siRNA22 | ShortStack |
| gba-b1.0r1-68000 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9558:237574-237825 | - | 2,360 | 5.18 | UCUGAAUAGAACGAUGAUGAUG | | siRNA22 | ShortStack |
| gba-b1.0r1-68001 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9558:238129-238278 | - | 410 | 0.90 | UGUAUUACGGAUAGCAGUGCCAA | | siRNA22 | ShortStack |
| gba-b1.0r1-68002 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9558:238408-238567 | - | 484 | 1.06 | UUCACCUCCAUUGUCCGUCCUAAG | | siRNA22 | ShortStack |
| gba-b1.0r1-68003 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9558:238882-239158 | - | 392 | 0.86 | CAAAGACGAAAUUCCUUUACUC | | siRNA22 | ShortStack |
| gba-b1.0r1-68004 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9558:239437-239812 | . | 4,007 | 8.80 | CAUGGUGAGUUAGAAGAGGAGU | | siRNA22 | ShortStack |
| gba-b1.0r1-68005 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9558:241052-241294 | - | 1,935 | 4.25 | UACCCCGUAGUUGAAUGACGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-68007 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9558:242695-242917 | - | 9,334 | 20.49 | CGAGAGCGCAUUUGUAGGCAUU | | siRNA22 | ShortStack |
| gba-b1.0r1-68009 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9558:244395-244505 | - | 3,634 | 7.98 | UGUGUAUUUGAAGAAGCUGCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-68289 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9612:257703-257853 | . | 1,046 | 2.30 | AGUAAAUUGACCGGAACGAAAAAU | | siRNA22 | ShortStack |
| gba-b1.0r1-68336 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9635:242051-242236 | + | 278 | 0.61 | UUUCAACUGCAUGGCAUUUCAU | | siRNA22 | ShortStack |
| gba-b1.0r1-68337 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9635:242403-242505 | . | 1,025 | 2.25 | UAUAUUCUUCUAUCGUAGGCAC | | siRNA22 | ShortStack |
| gba-b1.0r1-68338 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9635:243014-243090 | . | 126 | 0.28 | UCUGGAAGUAACCACGGAGCUC | | siRNA22 | ShortStack |
| gba-b1.0r1-68339 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9635:248677-248811 | - | 1,214 | 2.67 | AAGAAAAUGAAAUUGUCGGCAC | | siRNA22 | ShortStack |
| gba-b1.0r1-68440 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9660:341457-341526 | + | 1,699 | 3.73 | UAAGAUCAGUACGAAGCCUCGG | | siRNA22 | ShortStack |
| gba-b1.0r1-68528 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9678:107951-108263 | - | 816 | 1.79 | UACGGAUGAGUGGAUCUUGGAU | | siRNA22 | ShortStack |
| gba-MIR7502ah-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9746:115487-115629 | - | 5 | 0.01 | CACUGUCUGGUUAUUCUGUUAA | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-68797 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9783:5064-5193 | . | 1,594 | 3.50 | UGGGGCAAGGAAUGUUAGCGUC | | siRNA22 | ShortStack |
| gba-MIRC117b-m30 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9863:7011-7052 | - | 2 | 0.00 | CUACUUCAAUGAAAUAUUUUCAGG | | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-69375 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold991:48087-48192 | . | 217 | 0.48 | UCCUGUCGCCACUGCUCUGAAGU | | siRNA22 | ShortStack |
| gba-b1.0r1-69465 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9935:13422-13450 | + | 391 | 0.86 | CGGACUUGUUGAGAAUGGUAG | | siRNA22 | ShortStack |
| gba-b1.0r1-69522 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9936:123175-123354 | - | 1,800 | 3.95 | UUUGUCAACAAUGUAGCAGGUU | | siRNA22 | ShortStack |
| gba-b1.0r1-69600 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold995:236151-236390 | - | 5,952 | 13.07 | UAGGUUGUGGUUGGAACCGGUU | | siRNA22 | ShortStack |
| gba-MIR399k-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9951:39970-40090 | - | 1 | 0.00 | UGCCAAAGGAGAUUUGCCCGGC | miR399 | siRNA22 | Hu_et_al_2015 |
| gba-b1.0r1-69650 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold9952:14901-15094 | + | 456 | 1.00 | CUGGAACAAUUGGAUUGGCAGG | | siRNA22 | ShortStack |
| gba-MIR403a-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold998:78168-78269 | . | 33 | 0.07 | AGUUUUGUGCGUGAAUCUAAUA | miR403 | siRNA22 | Hu_et_al_2015 |
| gba-MIR403b-m1 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold998:78168-78269 | . | 33 | 0.07 | AGUUUUGUGCGUGAAUCUAAUA | miR403 | siRNA22 | Hu_et_al_2015 |
| gba-MIR403a-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold998:80865-80966 | . | 36 | 0.08 | AGUUUUGUGCGUGAAUCUAAUA | miR403 | siRNA22 | Hu_et_al_2015 |
| gba-MIR403b-m2 | Gossypium barbadense (Pima Cotton) 1.0 | scaffold998:80865-80966 | . | 36 | 0.08 | AGUUUUGUGCGUGAAUCUAAUA | miR403 | siRNA22 | Hu_et_al_2015 |
Data from Lunardon et al. (2020)