het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Glycine max (Soybean) genome build 1.0 (gma-b1.0)

Version v1.0 of Glycine max Merrill cv. Williams 82 from Ensembl Plants

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
gma-MIR395h-1Glycine max (Soybean) 1.01:4792375-4792487-260.01UGAAGUGUUUGGGAGAACUCUmiR395nearMIRNAmiRBase21-uniq
gma-MIR9755-1Glycine max (Soybean) 1.01:24948438-24948530-2,0570.51UGAUCCAGGAACUUUUCAUCUmiR9755nearMIRNAmiRBase21-uniq
gma-MIR393b-1Glycine max (Soybean) 1.01:41428832-41428947-1,1580.28GAUCAUGCUAUCCCUUUGGACmiR393nearMIRNAmiRBase21-uniq
gma-MIR5761a-1Glycine max (Soybean) 1.010:50654873-50655068-3,2780.80UUUUGUGUCGUGAAGCUUUUGmiR5761nearMIRNAmiRBase21-uniq
gma-MIR5763c-1Glycine max (Soybean) 1.013:35311541-35311608-16,7044.10UGAACUAUACAAAGACGGUUAmiR5763nearMIRNAmiRBase21-uniq
gma-MIR530b-1Glycine max (Soybean) 1.013:40315639-40315789-2450.06UGCAUUUGCACCUGCACUUUAmiR530nearMIRNAmiRBase21-uniq
gma-MIR4346-1Glycine max (Soybean) 1.014:4295413-4295530-279,43168.54UUUCUCAGGAUUUUUUGAAGCCnearMIRNAmiRBase21-uniq
gma-MIR394d-1Glycine max (Soybean) 1.015:3767178-3767260+2,4680.61UUGGCAUUCUGUCCACCUCCmiR394nearMIRNAmiRBase21-uniq
gma-MIR319d-1Glycine max (Soybean) 1.015:40230216-40230405-17,0954.19UGGACUGAAGGGGAGCUCCUUCmiR319nearMIRNAmiRBase21-uniq
gma-MIR5766-1Glycine max (Soybean) 1.016:2041104-2041343-4260.10UUGAGGCUGAGAAGAGGCAAGmiR5766nearMIRNAmiRBase21-uniq
gma-MIR156r-1Glycine max (Soybean) 1.016:6487074-6487239+10,1962.50CUGACAGAAGAUAGAGAGCAUmiR156nearMIRNAmiRBase21-uniq
gma-MIR1513c-1Glycine max (Soybean) 1.017:1401433-1401523-1,2740.31AAAGCCAUGACUUACACACGCmiR1513nearMIRNAmiRBase21-uniq
gma-MIR2111c-1Glycine max (Soybean) 1.018:49962727-49962885-17,1874.22UAAUCUGCAUCCUGAGGUUUmiR2111nearMIRNAmiRBase21-uniq
gma-MIR1535b-1Glycine max (Soybean) 1.019:43786762-43786851-16,0783.94CUUGUUUGUGGUGAUGUCUAGmiR1535nearMIRNAmiRBase21-uniq
gma-MIR9746d-1Glycine max (Soybean) 1.03:2825168-2825277+670.02AAAGUGUUUGAAUCUCAAUUAGAUmiR9746nearMIRNAmiRBase21-uniq
gma-MIR5761b-1Glycine max (Soybean) 1.03:3811058-3811157+4,0050.98UUUUGUGUCGUGAAGCUUUUGmiR5761nearMIRNAmiRBase21-uniq
gma-MIR164c-1Glycine max (Soybean) 1.03:5291969-5292058-7410.18UGGAGAAGCAGGGCACGUGCAmiR164nearMIRNAmiRBase21-uniq
gma-MIR166q-1Glycine max (Soybean) 1.04:44850185-44850336+77,53819.02UCUCGGACCAGGCUUCAUUCCmiR166nearMIRNAmiRBase21-uniq
gma-MIR394e-1Glycine max (Soybean) 1.05:35743182-35743292+7,8601.93UUGGCAUUCUGUCCACCUCCmiR394nearMIRNAmiRBase21-uniq
gma-MIR169t-1Glycine max (Soybean) 1.05:41794128-41794253-1,8110.44UGCAUGCCUCUUGUCUUACUUnearMIRNAmiRBase21-uniq
gma-MIR2606b-1Glycine max (Soybean) 1.06:37942221-37942403-13,7903.38AAAAGCACUUAAGGAACGGUAmiR2606nearMIRNAmiRBase21-uniq
gma-MIR166l-1Glycine max (Soybean) 1.06:45110922-45111100-33,7038.27UCUCGGACCAGGCUUCAUUUmiR166nearMIRNAmiRBase21-uniq
gma-MIR394f-1Glycine max (Soybean) 1.08:9880074-9880157+560.01UUUGGCAUUCUGUCCACCUCCmiR394nearMIRNAmiRBase21-uniq
gma-MIR166t-1Glycine max (Soybean) 1.09:37125225-37125360-25,7236.31UCUCGGACCAGGCUUCAUUCCmiR166nearMIRNAmiRBase21-uniq
gma-MIR4392-1Glycine max (Soybean) 1.09:46771234-46771343+6610.16UCUGCGAAAAUGUGAUUUCGGAmiR4392nearMIRNAmiRBase21-uniq