Data from Lunardon et al. (2020)

Annotations viewer

Genome

Triticum aestivum (Wheat) genome build 1 (tae-b1)

Version TGACv1 of Triticum aestivum cv. Chinese spring CS42 from Ensembl Plants

Locus type

Annotation source

Name contains:

Family contains:

Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
tae-MIR5384-m1	Triticum aestivum (Wheat) 1	TGACv1_scaffold_019809_1AS:1741-1806	+	6	0.02	UUCGCCGGUCGCGCGUUCCCCU	miR5384	nearMIRNA	miRBase21-BestBlastHit
tae-MIR530-m1	Triticum aestivum (Wheat) 1	TGACv1_scaffold_093686_2AL:51987-52145	-	13	0.04	UGCAGUGGCAUAUGCAACUCU	miR530	nearMIRNA	miRBase21-BestBlastHit
tae-MIR9665-m1	Triticum aestivum (Wheat) 1	TGACv1_scaffold_095779_2AL:17182-17312	-	26	0.08	GUUUGACUUUGCACUGCUAGCGGU	miR9665	nearMIRNA	miRBase21-BestBlastHit
tae-MIR9679-m1	Triticum aestivum (Wheat) 1	TGACv1_scaffold_161362_2DL:22560-22648	+	4,828	13.95	CAGAACCAGAAUGAGUAGCUC	miR9679	nearMIRNA	miRBase21-BestBlastHit
tae-MIR1137b-m1	Triticum aestivum (Wheat) 1	TGACv1_scaffold_308271_4AS:22042-22131	+	1,226	3.54	UCCGUUCCAGAAUAGAUGACC	miR1137	nearMIRNA	miRBase21-BestBlastHit
tae-MIR1123-m1	Triticum aestivum (Wheat) 1	TGACv1_scaffold_321637_4BL:18667-18883	+	18	0.05	UCAUUCAUCAGGGCGGGUCUC	miR1123	nearMIRNA	miRBase21-BestBlastHit
tae-MIR9654a-m1	Triticum aestivum (Wheat) 1	TGACv1_scaffold_404182_5BL:286913-287019	-	22	0.06	UUCUGAAAGGCUUGAAGCGAA	miR9654	nearMIRNA	miRBase21-BestBlastHit
tae-MIR9660-m1	Triticum aestivum (Wheat) 1	TGACv1_scaffold_500768_6BL:63504-63593	-	489	1.41	UUGCGAGCAACGGAUGAAUC	miR9660	nearMIRNA	miRBase21-BestBlastHit
tae-MIR9666b-m5	Triticum aestivum (Wheat) 1	TGACv1_scaffold_569544_7AS:121509-121606	-	43	0.12	GCCAUCAUACGUCCAACCGUG	miR9666	nearMIRNA	miRBase21-BestBlastHit
tae-MIR9657a-m5	Triticum aestivum (Wheat) 1	TGACv1_scaffold_577645_7BL:46733-46810	+	6	0.02	UGUGCUUCCUCGUCGAACGGU	miR9657	nearMIRNA	miRBase21-BestBlastHit
tae-MIR5200-m1	Triticum aestivum (Wheat) 1	TGACv1_scaffold_592091_7BS:110211-110303	-	2	0.01	UAAGCCUUAGUGAAUAUCUAC	miR5200	nearMIRNA	miRBase21-BestBlastHit
tae-MIR9667-m1	Triticum aestivum (Wheat) 1	TGACv1_scaffold_592572_7BS:35824-35914	-	528	1.53	AAAUAUGGCAAACAAUGAAUG	miR9667	nearMIRNA	miRBase21-BestBlastHit