het siRNAsData from Lunardon et al. (2020)miRNA

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Genome

Triticum aestivum (Wheat) genome build 1 (tae-b1)

Version TGACv1 of Triticum aestivum cv. Chinese spring CS42 from Ensembl Plants

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
tae-MIR164-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_000405_1AL:15244-15399-4,79113.84UGGAGAAGCAGGGCACGUGCAmiR164MIRNAmiRBase21-BestBlastHit
tae-MIR9664-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_030938_1BL:32986-33103+2,0365.88UUGCAGUCCUCGAUGUCGUAGmiR9664MIRNAmiRBase21-BestBlastHit
tae-MIR9652-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_158211_2DL:31006-31129-5581.61CCUGUUUGUCAUUAAGUUUCUUmiR9652MIRNAmiRBase21-BestBlastHit
tae-MIR9676-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_224755_3B:28348-28465+780.23UACGGCCUGAUGACAUCCACGmiR9676MIRNAmiRBase21-BestBlastHit
tae-MIR9669-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_249276_3DL:90996-91082+130,075375.84UACUGUGGGCACUUAUUUGACAmiR9669MIRNAmiRBase21-BestBlastHit
tae-MIR9677b-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_272534_3DS:16965-17103+312,637903.34UGGCCGUUGGUAGAGUAGGAGAmiR9677MIRNAmiRBase21-BestBlastHit
tae-MIR9677a-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_272534_3DS:16982-17085+311,974901.43UGGCCGUUGGUAGAGUAGGAGAmiR9677MIRNAmiRBase21-BestBlastHit
tae-MIR9666c-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_289089_4AL:71663-71755+8872.56CGGUUGGCUGUAUGAUGGCGAmiR9666MIRNAmiRBase21-BestBlastHit
tae-MIR9674a-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_343065_4DL:73032-73121+3,65410.56GUAGGAUGGCUGGUGCUAUGGmiR9674MIRNAmiRBase21-BestBlastHit
tae-MIR171a-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_374177_5AL:65449-65578+1,5924.60UGUUGGCUCGACUCACUCAGAmiR171MIRNAmiRBase21-BestBlastHit
tae-MIR160-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_404439_5BL:25740-25887-1370.40UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAmiRBase21-BestBlastHit
tae-MIR9672a-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_407673_5BL:33289-33432+230,302665.44UACCACGACUGUCAUUAAGCAmiR9672MIRNAmiRBase21-BestBlastHit
tae-MIR9672b-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_434059_5DL:23663-23782+44,987129.99UACCACGACUGUCAUUAAGCAmiR9672MIRNAmiRBase21-BestBlastHit
tae-MIR9772-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_434125_5DL:64648-64737-1,3093.78UGAGAUGAGAUUACCCCAUACmiR9772MIRNAmiRBase21-BestBlastHit
tae-MIR156-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_434151_5DL:30287-30576-14,16940.94UGACAGAAGAGAGUGAGCACmiR156MIRNAmiRBase21-BestBlastHit
tae-MIR9663-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_513781_6BS:22944-23045+106,303307.16AAGCGUAGUCGAACGAAUCUGmiR9663MIRNAmiRBase21-BestBlastHit
tae-MIR9659-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_514102_6BS:61370-61490+3,2159.29UCCAAUGGUUGUUCACGGCAUCmiR9659MIRNAmiRBase21-BestBlastHit
tae-MIR9658-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_514503_6BS:24190-24338+5,26715.22AUCGUUCUGGGUGAAUAGGCCmiR9658MIRNAmiRBase21-BestBlastHit
tae-MIR9655-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_515486_6BS:9161-9282+7,46821.58UCGGCUACUUCCUUUCCCUUGCmiR9655MIRNAmiRBase21-BestBlastHit
tae-MIR397-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_515496_6BS:24086-24179-23,62868.27UUGAGUGCAGCGUUGAUGAACmiR397MIRNAmiRBase21-BestBlastHit
tae-MIR9656-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_527135_6DL:45521-45650-1,1243.25AUUGUUCAGUGUUUCGAAGGAmiR9656MIRNAmiRBase21-BestBlastHit
tae-MIR167c-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_543391_6DS:47510-47656-7262.10UGAAGCUGCCAGCAUGAUCUGCmiR167MIRNAmiRBase21-BestBlastHit
tae-MIR9670-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_544321_6DS:9374-9451+3,2429.37AGGUGGAAUACUUGAAGAAGAmiR9670MIRNAmiRBase21-BestBlastHit
tae-MIR9657b-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_569025_7AS:113433-113526+1,1333.27UUCGUCGGAGAAGCAUGUUGCmiR9657MIRNAmiRBase21-BestBlastHit
tae-MIR9778-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_577919_7BL:30376-30467-3,0398.78UGCAUCAUCUCGAACUCGUCGGmiR9778MIRNAmiRBase21-BestBlastHit
tae-MIR9673-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_592887_7BS:56274-56363-2350.68UAAGAAGCAAAUAGCACAUGmiR9673MIRNAmiRBase21-BestBlastHit
tae-MIR9678-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_604310_7DL:20757-20851+1330.38UCUGGCGAGGGACAUACACUGUmiR9678MIRNAmiRBase21-BestBlastHit
tae-MIR9671-m1Triticum aestivum (Wheat) 1TGACv1_scaffold_641065_U:188822-188920+7402.14UGACUUUACACAACUGUCCGGCAGmiR9671MIRNAmiRBase21-BestBlastHit