Data from Lunardon et al. (2020)

Annotations viewer

Genome

Hevea brasiliensis (Rubber Tree) genome build 0 (hbr-b0)

Version v0 of Hevea brasiliensis cv. Reyan7-33-97 from NCBI

Locus type

Annotation source

Name contains:

Family contains:

Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
hbr-MIR166b-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold0029:2847818-2847937	+	36,585	275.40	UCGGACCAGGCUUCAUUCCCC	miR166	MIRNA	miRBase21-BestBlastHit
hbr-MIR408a-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold0056:2268689-2268816	+	13,801	103.89	UGCACUGCCUCUUCCCUGGC	miR408	MIRNA	miRBase21-BestBlastHit
hbr-MIR2118-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold0065:716643-716782	+	8,368	62.99	GUUCCCAUGCCACCCAUUUCUA	miR2118	MIRNA	miRBase21-BestBlastHit
hbr-MIR319-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold0105:1229323-1229543	-	785	5.91	UUGGACUGAAGGGAGCUCCC	miR319	MIRNA	miRBase21-BestBlastHit
hbr-MIR482b-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold0159:1127895-1128044	-	120,968	910.59	GGAAUGGGCGGUUUGGGAAAG	miR482	MIRNA	miRBase21-BestBlastHit
hbr-MIR408b-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold0214:972346-972465	+	2,955	22.24	UGCACUGCCUCUUCCCUGGC	miR408	MIRNA	miRBase21-BestBlastHit
hbr-MIR396a-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold0486:876290-876375	+	50,146	377.48	UUCCACAGCUUUCUUGAACUU	miR396	MIRNA	miRBase21-BestBlastHit
hbr-MIR156-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold0769:508835-508953	+	1,153	8.68	UUGACAGAAGAUAGAGAGCAC	miR156	MIRNA	miRBase21-BestBlastHit
hbr-MIR166a-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold0821:359793-359919	+	1,020,429	7,681.34	UCGGACCAGGCUUCAUUCCUC	miR166	MIRNA	miRBase21-BestBlastHit
hbr-MIR396b-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold1011:192107-192260	+	762,464	5,739.50	UUCCACAGCUUUCUUGAACUG	miR396	MIRNA	miRBase21-BestBlastHit
hbr-MIR159a-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold1026:270259-270479	-	113,700	855.88	UUUGGAUUGAAGGGAGCUCUA	miR159	MIRNA	miRBase21-BestBlastHit
hbr-MIR159b-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold1026:270259-270472	-	113,700	855.88	UUUGGAUUGAAGGGAGCUCUA	miR159	MIRNA	miRBase21-BestBlastHit
hbr-MIR398-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold1129:195945-196084	-	468	3.52	GGAGCGACCUGAGAUCACAUG	miR398	MIRNA	miRBase21-BestBlastHit
hbr-MIR476-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold1336:127563-127688	+	2,380	17.92	UAAUCCUUCUUUGCAAAGUCC	miR476	MIRNA	miRBase21-BestBlastHit
hbr-MIR9386-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold1467:107717-107832	-	598,593	4,505.95	UUUGCAGUUCGAAAGUGGAAGC	miR9386	MIRNA	miRBase21-BestBlastHit
hbr-MIR482a-m1	Hevea brasiliensis (Rubber Tree) 0	scaffold1566:33818-33930	+	183,420	1,380.71	AGAUGGGUGGCUGGGCAAGAAG	miR482	MIRNA	miRBase21-BestBlastHit