het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Prunus persica (Peach) genome build 2.0 (ppe-b2.0)

Version v2.0 of Prunus persica cv. Lovell from Phytozome

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
ppe-MIR169a-m1Prunus persica (Peach) 2.0Pp01:5674587-5674743.1721.96CAGCCAAGGAUGACUUGCCGGmiR169siRNA21miRBase21-BestBlastHit
ppe-MIR6262-m1Prunus persica (Peach) 2.0Pp01:24878869-24879054.60.07UCUUUAGAAAGUUAGAAUUGUmiR6262siRNA21miRBase21-BestBlastHit
ppe-MIR8127-m1Prunus persica (Peach) 2.0Pp02:22081974-22082195+6,70276.17AACUGUGGACAUACCCUUUGAmiR8127siRNA21miRBase21-BestBlastHit
ppe-MIR393b-m1Prunus persica (Peach) 2.0Pp02:28654018-28654122-89310.15UUCCAAAGGGAUCGCAUUGAUmiR393siRNA21miRBase21-BestBlastHit
ppe-MIR828-m1Prunus persica (Peach) 2.0Pp02:29568537-29568661-2212.51UCUUGCUCAAAUGAGUAUUCCAmiR828siRNA21miRBase21-BestBlastHit
ppe-MIR171d-m1Prunus persica (Peach) 2.0Pp02:29621754-29621904-2,86232.53CGAGCCGAAUCAAUAUCACUCmiR171siRNA21miRBase21-BestBlastHit
ppe-MIR164d-m1Prunus persica (Peach) 2.0Pp03:2645966-2646073.6647.55UGGAGAAGCAGGGCACGUGCUmiR164siRNA21miRBase21-BestBlastHit
ppe-MIR1511-m1Prunus persica (Peach) 2.0Pp03:9435160-9435243+199,4092,266.25ACCUGGCUCUGAUACCAUAACmiR1511siRNA21miRBase21-BestBlastHit
ppe-MIR477a-m1Prunus persica (Peach) 2.0Pp03:15484911-15485032-1,36515.51GUUGGGGGCUCUUUUGGGACGmiR477siRNA21miRBase21-BestBlastHit
ppe-MIR477b-m1Prunus persica (Peach) 2.0Pp03:15489969-15490090-6337.19GUUGGGGGCUCUUUUGGGACGmiR477siRNA21miRBase21-BestBlastHit
ppe-MIR8131-m1Prunus persica (Peach) 2.0Pp03:18777084-18777173+2332.65UGGCAAAUCAACUCAGCUUAGmiR8131siRNA21miRBase21-BestBlastHit
ppe-MIR6271-m1Prunus persica (Peach) 2.0Pp04:8927455-8927577-1,48316.85UCAUUUCUGACGGAGCUGGCUmiR6271siRNA21miRBase21-BestBlastHit
ppe-MIR8130-m1Prunus persica (Peach) 2.0Pp05:13056273-13056521+18,035204.96CAAGGCACGAGAUAUCCGAUCmiR8130siRNA21miRBase21-BestBlastHit
ppe-MIR858-m1Prunus persica (Peach) 2.0Pp05:17621572-17621974+4,69553.36CUCGUUGUCUGUUCGACCUUGmiR858siRNA21miRBase21-BestBlastHit
ppe-MIR6294-m1Prunus persica (Peach) 2.0Pp05:18318443-18318646.1061.21UUGUGAUUAGCCUACACCACGmiR6294siRNA21miRBase21-BestBlastHit
ppe-MIR6288b-m1Prunus persica (Peach) 2.0Pp06:7137462-7137553+971.10UCAAUUAGAAAAUGAUAAGUGmiR6288siRNA21miRBase21-BestBlastHit
ppe-MIR6276-m1Prunus persica (Peach) 2.0Pp06:8107914-8108022+10.01CAUCUCUUUUACUACAAGGAAmiR6276siRNA21miRBase21-BestBlastHit
ppe-MIR6295-m1Prunus persica (Peach) 2.0Pp06:27549124-27549453+5,74865.33UGAAUACCAGAGCUUGAGGACmiR6295siRNA21miRBase21-BestBlastHit
ppe-MIR6274b-m1Prunus persica (Peach) 2.0Pp07:3795314-3795418.4084.64AUUUCGACUAAUAACACAAUGmiR6274siRNA21miRBase21-BestBlastHit
ppe-MIR6278-m1Prunus persica (Peach) 2.0Pp07:7788546-7788643+2,09923.86ACCUUGUAGAGAAGGUUCAUUmiR6278siRNA21miRBase21-BestBlastHit
ppe-MIR6280-m1Prunus persica (Peach) 2.0Pp07:9285605-9285769.80.09CAACAACAAUUAUAGUUACCGCmiR6280siRNA21miRBase21-BestBlastHit
ppe-MIR6281-m1Prunus persica (Peach) 2.0Pp08:277601-277760+1,34315.26GCGGAGAGAAGGAGGUCGAGUsiRNA21miRBase21-BestBlastHit
ppe-MIR6284-m1Prunus persica (Peach) 2.0Pp08:21692327-21692423.8169.27UUUGGACCAUGGAUGAAGAUUmiR6284siRNA21miRBase21-BestBlastHit