het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Prunus persica (Peach) genome build 2.0 (ppe-b2.0)

Version v2.0 of Prunus persica cv. Lovell from Phytozome

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
ppe-MIR8133-m1Prunus persica (Peach) 2.0Pp01:498109-498270+4234.81UCCUGUGCGAACGUCCAGAAGmiR8133nearMIRNAmiRBase21-BestBlastHit
ppe-MIR7122b-m1Prunus persica (Peach) 2.0Pp01:2244304-2244423+3,72342.31UUAUACAAUGAAAUCACGGUCGmiR7122nearMIRNAmiRBase21-BestBlastHit
ppe-MIR169k-m1Prunus persica (Peach) 2.0Pp01:5660948-5661097-901.02GAGCCAAGGAUGAAUUGCCGGmiR169nearMIRNAmiRBase21-BestBlastHit
ppe-MIR395m-m1Prunus persica (Peach) 2.0Pp01:27720832-27720962-981.11CUGAAGUGUUUGGGGGAACUCmiR395nearMIRNAmiRBase21-BestBlastHit
ppe-MIR395l-m1Prunus persica (Peach) 2.0Pp01:27739824-27739926-1,87121.26CUGAAGUGUUUGGGGGAACUCmiR395nearMIRNAmiRBase21-BestBlastHit
ppe-MIR395d-m1Prunus persica (Peach) 2.0Pp01:27764041-27764256-2192.49CUGAAGUGUUUGGGGGAACUCmiR395nearMIRNAmiRBase21-BestBlastHit
ppe-MIR395o-m1Prunus persica (Peach) 2.0Pp01:27768992-27769074+921.05GUUCCCUCAAACACUUCAUUmiR395nearMIRNAmiRBase21-BestBlastHit
ppe-MIR396a-m1Prunus persica (Peach) 2.0Pp01:40254306-40254403-1,06512.10UUCCACAGCUUUCUUGAACGUmiR396nearMIRNAmiRBase21-BestBlastHit
ppe-MIR394b-m1Prunus persica (Peach) 2.0Pp01:46215543-46215698-96210.93UUGGCAUUCUGUCCACCUCCmiR394nearMIRNAmiRBase21-BestBlastHit
ppe-MIR393a-m1Prunus persica (Peach) 2.0Pp02:26224921-26225015+3283.73UCCAAAGGGAUCGCAUUGAUCmiR393nearMIRNAmiRBase21-BestBlastHit
ppe-MIR399c-m1Prunus persica (Peach) 2.0Pp03:1446492-1446638+120.14UGCCAAAGAAGAGUUGCCCUAmiR399nearMIRNAmiRBase21-BestBlastHit
ppe-MIR399n-m1Prunus persica (Peach) 2.0Pp03:5253496-5253617-2142.43UGCCAAAGGAGAUUUGCUCGGmiR399nearMIRNAmiRBase21-BestBlastHit
ppe-MIR156h-m1Prunus persica (Peach) 2.0Pp03:16336810-16336918+284,2113,230.01UUGACAGAAGAUAGAGAGCACmiR156nearMIRNAmiRBase21-BestBlastHit
ppe-MIR169i-m1Prunus persica (Peach) 2.0Pp03:27020399-27020594+220.25UAGCCAAGGAUGACUUGCCUGCmiR169nearMIRNAmiRBase21-BestBlastHit
ppe-MIR2111a-m1Prunus persica (Peach) 2.0Pp04:5127334-5127427-140.16UAAUCUGCAUCCUGAGGUUUAmiR2111nearMIRNAmiRBase21-BestBlastHit
ppe-MIR6273-m1Prunus persica (Peach) 2.0Pp05:3421262-3421384+110.13AAUGCAGCAUGAUUUUUUUUUmiR6273nearMIRNAmiRBase21-BestBlastHit
ppe-MIR6275-m1Prunus persica (Peach) 2.0Pp05:10003687-10003793-850.97CAGUGGAAGUAGCAAGGGGAAmiR6275nearMIRNAmiRBase21-BestBlastHit
ppe-MIR156g-m1Prunus persica (Peach) 2.0Pp05:17447875-17447956+48,588552.19UUGACAGAAGAUAGAGAGCACmiR156nearMIRNAmiRBase21-BestBlastHit
ppe-MIR156b-m1Prunus persica (Peach) 2.0Pp06:1928560-1928648-1,987,48422,587.39UUGACAGAAGAAAGAGAGCACmiR156nearMIRNAmiRBase21-BestBlastHit
ppe-MIR8126-m1Prunus persica (Peach) 2.0Pp06:8374973-8375159+1,34815.32UCUGAGUCAGAUUACUGAAUAmiR8126nearMIRNAmiRBase21-BestBlastHit
ppe-MIR6277-m1Prunus persica (Peach) 2.0Pp06:30077200-30077295-8429.57UGUGUGGAAAGAGCGAGACGUmiR6277nearMIRNAmiRBase21-BestBlastHit
ppe-MIR156a-m1Prunus persica (Peach) 2.0Pp07:18998140-18998228-1221.39GUGACAGAAGAAAGAGAGCACmiR156nearMIRNAmiRBase21-BestBlastHit
ppe-MIR6285-m1Prunus persica (Peach) 2.0Pp08:17429089-17429169-3,14435.73CUAGGCUCAUCUUACAUCUACCnearMIRNAmiRBase21-BestBlastHit