| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| mdm-MIR408c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_300698:349460-349615 | + | 2,306 | 5.10 | ACAGGGAAGAGGUAGAGCAUG | miR408 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR171k-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_304386:5771-5869 | - | 562 | 1.24 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR171l-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_304386:5771-5869 | - | 562 | 1.24 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR168a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_306718:481064-481206 | + | 25,030 | 55.31 | UGGUGCAGGUCGGGAACCGCU | miR168 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR7121f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_306921:13287-13374 | - | 17,528 | 38.73 | UCCUCUUGGUGAUCGCCCUGC | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR5225c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_308122:1542-1603 | - | 6 | 0.01 | UCAUCUGUCCUCGACUGAA | miR5225 | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR169a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_308763:32920-32957 | | 0 | 0.00 | | | NotExpressed | miRBase21-BestBlastHit |
| mdm-MIR156p-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_310014:1820-1919 | - | 12,568 | 27.77 | CUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156r-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_310014:1820-1919 | - | 12,568 | 27.77 | CUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156x-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_310014:1820-1919 | - | 12,568 | 27.77 | CUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156z-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_310014:1820-1919 | - | 12,568 | 27.77 | CUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR396c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_311168:958-1064 | - | 194,010 | 428.73 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR396d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_311168:960-1062 | - | 194,010 | 428.73 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_311635:3544-3628 | - | 95,199 | 210.37 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_313327:11130-11261 | + | 182,769 | 403.89 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7124b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_313344:45157-45354 | - | 38,413 | 84.89 | UCCUAUAUAAUGUUAUUAGCU | miR7124 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7124a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_313344:45180-45331 | - | 37,900 | 83.75 | UCCUAUAUAAUGUUAUUAGCU | miR7124 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7125-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_313420:444388-444494 | + | 28,218 | 62.36 | CGAACUUAUUGCAACUAGCUU | miR7125 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR390c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_313525:168065-168192 | - | 3,436 | 7.59 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR390d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_313525:168065-168192 | - | 3,436 | 7.59 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7122a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_313830:122844-122965 | - | 40,475 | 89.44 | UUAUACAGAGAAAUCACGGUCG | miR7122 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7122b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_313830:122844-122965 | - | 40,475 | 89.44 | UUAUACAGAGAAAUCACGGUCG | miR7122 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR399e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_313850:1864-1987 | - | 31,326 | 69.23 | UGCCAAAGGAGAUUUGCUCGG | miR399 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR399f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_313850:1864-1987 | - | 31,326 | 69.23 | UGCCAAAGGAGAUUUGCUCGG | miR399 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR477b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314509:2252-2270 | | 0 | 0.00 | | | NotExpressed | miRBase21-BestBlastHit |
| mdm-MIR171g-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314659:6641-6723 | | 0 | 0.00 | | | NotExpressed | miRBase21-BestBlastHit |
| mdm-MIR171h-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314659:6641-6723 | | 0 | 0.00 | | | NotExpressed | miRBase21-BestBlastHit |
| mdm-MIR171m-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314659:6641-6724 | | 0 | 0.00 | | | NotExpressed | miRBase21-BestBlastHit |
| mdm-MIR171n-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314659:6641-6724 | | 0 | 0.00 | | | NotExpressed | miRBase21-BestBlastHit |
| mdm-MIR171o-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314659:6641-6724 | | 0 | 0.00 | | | NotExpressed | miRBase21-BestBlastHit |
| mdm-MIR319b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314843:17094-17286 | + | 12,892 | 28.49 | UUGGACUGAAGGGAGCUCCCU | miR319 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314883:7610-7724 | - | 4,284 | 9.47 | AGAAUCUUGAUGAUGCUGCAG | miR172 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314883:7610-7724 | - | 4,284 | 9.47 | AGAAUCUUGAUGAUGCUGCAG | miR172 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172m-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314883:7610-7724 | - | 4,284 | 9.47 | AGAAUCUUGAUGAUGCUGCAG | miR172 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172n-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_314883:7610-7724 | - | 4,284 | 9.47 | AGAAUCUUGAUGAUGCUGCAG | miR172 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR3627c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_315107:10898-10986 | + | 5,381 | 11.89 | UCGCAGGAGAGAUGGCACUA | miR3627 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR3627a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_315107:10900-10981 | + | 5,372 | 11.87 | UCGCAGGAGAGAUGGCACUA | miR3627 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR319a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_315203:49670-49864 | + | 29,491 | 65.17 | AGAGCUUUCUUUAGUCCAUU | miR319 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR2111b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_315606:2656-2765 | + | 1,257 | 2.78 | UCCUUGGGAUGCAGAUUACCU | miR2111 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR2111a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_315606:2663-2757 | + | 1,257 | 2.78 | UCCUUGGGAUGCAGAUUACCU | miR2111 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR477a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_315674:140551-140577 | | 0 | 0.00 | | | NotExpressed | miRBase21-BestBlastHit |
| mdm-MIR399d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_316267:8228-8364 | - | 631 | 1.39 | UGCCAAAGGAGAGUUGCCCUA | miR399 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR167a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_316994:3596-3701 | + | 12,333 | 27.25 | UGAAGCUGCCAGCAUGAUCUUA | miR167 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR167h-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_316994:3596-3701 | + | 12,333 | 27.25 | UGAAGCUGCCAGCAUGAUCUUA | miR167 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR167i-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_316994:3596-3701 | + | 12,333 | 27.25 | UGAAGCUGCCAGCAUGAUCUUA | miR167 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR535d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_317107:3593-3687 | + | 409,949 | 905.92 | UGACGACGAGAGAGAGCACGC | miR535 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR477b-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_317917:2928-2946 | | 0 | 0.00 | | | NotExpressed | miRBase21-BestBlastHit |
| mdm-MIR164c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318158:9079-9195 | + | 7,123 | 15.74 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR535a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318362:34184-34278 | + | 30,841 | 68.15 | UGACAACGAGAGAGAGCACGC | miR535 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR397b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318489:755-876 | + | 977 | 2.16 | UUGAGUGCAGCGUUGAUGAAA | miR397 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR7127b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318908:16461-16601 | - | 1,368 | 3.02 | CACUCUGACAAAUUGGAUGAG | miR7127 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR7127a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318908:16465-16596 | - | 1,368 | 3.02 | CACUCUGACAAAUUGGAUGAG | miR7127 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR408c-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318928:12545-12700 | + | 474,076 | 1,047.63 | ACAGGGAAGAGGUAGAGCAUG | miR408 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR408a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318928:12562-12684 | + | 474,073 | 1,047.63 | ACAGGGAAGAGGUAGAGCAUG | miR408 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR408b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318928:12580-12664 | + | 474,068 | 1,047.61 | ACAGGGAAGAGGUAGAGCAUG | miR408 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR408d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318928:12580-12664 | + | 474,068 | 1,047.61 | ACAGGGAAGAGGUAGAGCAUG | miR408 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318948:30030-30162 | + | 82,303 | 181.88 | AGAAUCUUGAUGAUGCUGCAU | miR172 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR172f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_318948:30030-30162 | + | 82,303 | 181.88 | AGAAUCUUGAUGAUGCUGCAU | miR172 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR390a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_319321:19835-19959 | + | 21,887 | 48.37 | CGCUAUCCAUCCUGAGUUUCA | miR390 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR535b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_319495:7812-7906 | - | 7,895 | 17.45 | UGACAAGGAGAGAGAGCACGC | miR535 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR535c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_319495:7817-7899 | - | 7,895 | 17.45 | UGACAAGGAGAGAGAGCACGC | miR535 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR166f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_319770:129860-129956 | - | 498,175 | 1,100.89 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172g-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_319774:5704-5808 | + | 15,871 | 35.07 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172h-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg0_319774:5704-5808 | + | 15,871 | 35.07 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7128-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg10_304009:91662-91698 | . | 9 | 0.02 | AUCAUUAACACUUAAUAACGA | miR7128 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR160a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg10_307812:470192-470274 | - | 6,554 | 14.48 | GCGUACAAGGAGCCAAGCAUA | miR160 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR160b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg10_307812:470192-470275 | - | 6,554 | 14.48 | GCGUACAAGGAGCCAAGCAUA | miR160 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR160d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg10_307812:470192-470275 | - | 6,554 | 14.48 | GCGUACAAGGAGCCAAGCAUA | miR160 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR160c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg10_311884:183638-183725 | + | 5,416 | 11.97 | GCGUAUGAGGAGCCAAGCAUA | miR160 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR166c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg10_313668:306682-306778 | - | 2,809,295 | 6,208.09 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172i-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_301549:5128123-5128303 | - | 2,587 | 5.72 | GGAAUCUUGAUGAUGCUGCAU | miR172 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR172j-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_301549:5128123-5128303 | - | 2,587 | 5.72 | GGAAUCUUGAUGAUGCUGCAU | miR172 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR172k-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_301549:5128123-5128303 | - | 2,587 | 5.72 | GGAAUCUUGAUGAUGCUGCAU | miR172 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR156t-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_304338:714819-714909 | - | 238 | 0.53 | GCUUUCUCUUCUUCUGUCAUC | miR156 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR156u-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_304338:714819-714909 | - | 238 | 0.53 | GCUUUCUCUUCUUCUGUCAUC | miR156 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR156v-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_304338:714819-714909 | - | 238 | 0.53 | GCUUUCUCUUCUUCUGUCAUC | miR156 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR156t-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_304338:715644-715734 | - | 12,964 | 28.65 | UUGACAGAAGAGAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156u-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_304338:715644-715734 | - | 12,964 | 28.65 | UUGACAGAAGAGAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156v-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_304338:715644-715734 | - | 12,964 | 28.65 | UUGACAGAAGAGAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR167b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_304899:909109-909228 | + | 73,310 | 162.00 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR167c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_304899:917763-917843 | + | 279 | 0.62 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR391-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_307158:714958-715054 | + | 209,982 | 464.03 | UACGCAGGAGAGAUGACGCCG | miR391 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR477a-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg11_307158:1628956-1628976 | | 0 | 0.00 | | | NotExpressed | miRBase21-BestBlastHit |
| mdm-MIR390b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg12_300114:1516584-1516686 | - | 3,545 | 7.83 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR164e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg12_300114:1803138-1803301 | + | 35,773 | 79.05 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR164f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg12_300114:1803138-1803301 | + | 35,773 | 79.05 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR164b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg12_300114:4436633-4436750 | - | 6,840 | 15.12 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR167f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg12_300114:6485144-6485380 | + | 482,440 | 1,066.12 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR167g-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg12_300114:6485187-6485353 | + | 482,364 | 1,065.95 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR394b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg12_302783:290475-290712 | + | 7,365 | 16.28 | UUGGCAUUCUGUCCACCUCC | miR394 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR858-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_302468:1603338-1604258 | - | 22,835 | 50.46 | UUCGUUGUCUGUUCGACCUGA | miR858 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR482c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_302468:1998546-1998686 | - | 214,034 | 472.98 | UCUUUCCUAACCCUCCCAUUCC | miR482 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR482a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_302468:2024526-2024580 | - | 62,608 | 138.35 | UCUUUCCUAUCCCUCCCAUUCC | miR482 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR482b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_302468:2024546-2024651 | - | 109,127 | 241.15 | UCUUUCCUAUCCCUCCCAUUCC | miR482 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR482d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_302468:2024546-2024651 | - | 109,127 | 241.15 | UCUUUCCUAUCCCUCCCAUUCC | miR482 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR395i-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_302468:4857221-4857324 | - | 388 | 0.86 | GUUCCCUUGACCACUUCAUUG | miR395 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR395a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_302468:4868746-4868838 | + | 93,024 | 205.57 | CUGAAGUGUUUGGGGGAACUC | miR395 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172i-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_303815:119663-119843 | - | 2,607 | 5.76 | GGAAUCUUGAUGAUGCUGCAU | miR172 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR172j-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_303815:119663-119843 | - | 2,607 | 5.76 | GGAAUCUUGAUGAUGCUGCAU | miR172 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR172k-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_303815:119663-119843 | - | 2,607 | 5.76 | GGAAUCUUGAUGAUGCUGCAU | miR172 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR167j-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg13_318043:4368-4506 | - | 75,057 | 165.86 | UGAAGCUGCCAGCAUGAUCUUA | miR167 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR482a-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg14_305191:1325533-1325581 | . | 5 | 0.01 | AAGAAGGAAAAUUGCAGAGAAAAU | | siRNA24 | miRBase21-BestBlastHit |
| mdm-MIR162a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg14_309937:1570672-1570764 | - | 56,633 | 125.15 | UCGAUAAACCUCUGCAUCCAG | miR162 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156ac-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg14_313404:241135-241390 | - | 42,770 | 94.52 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR1511-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_303989:1835305-1835431 | + | 11,783 | 26.04 | UAACCUAGCUCUGAUACCAUG | miR1511 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR1511-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_303989:1896691-1896817 | - | 30,897 | 68.28 | ACCUAGCUCUGAUACCAUGAA | miR1511 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR171j-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_308243:206743-206831 | - | 526 | 1.16 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR169b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313283:91324-91514 | + | 334 | 0.74 | UAGCCAAGGAUGAUUUGCCUGC | miR169 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156m-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313292:334040-334153 | + | 1,633,296 | 3,609.32 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156o-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313292:334049-334143 | + | 1,633,291 | 3,609.31 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156g-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313292:334051-334140 | + | 1,633,287 | 3,609.30 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156i-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313292:334052-334140 | + | 1,633,287 | 3,609.30 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR396f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313298:701644-701796 | . | 472,675 | 1,044.54 | UUCCACGGCUUUCUUGAACUG | miR396 | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR396g-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313298:701658-701783 | . | 472,674 | 1,044.53 | UUCCACGGCUUUCUUGAACUG | miR396 | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR171e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313395:214903-215044 | + | 3,763 | 8.32 | UGAUUGAGCCGCGCCAAUAUC | miR171 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR171d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313395:214918-215030 | + | 3,762 | 8.31 | UGAUUGAGCCGCGCCAAUAUC | miR171 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR171a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313395:215005-215032 | + | 3,625 | 8.01 | UGAUUGAGCCGCGCCAAUAUC | miR171 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR171b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313395:215005-215032 | + | 3,625 | 8.01 | UGAUUGAGCCGCGCCAAUAUC | miR171 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR156l-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313409:6458-6710 | - | 117,223 | 259.04 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313409:6521-6644 | - | 117,220 | 259.04 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156n-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_313658:72522-72658 | - | 24,865 | 54.95 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR827-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_314108:135895-136075 | - | 37,019 | 81.81 | UUAGAUGACCAUCAACGAACA | miR827 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_314818:2071-2160 | + | 1,007 | 2.23 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_314818:2071-2160 | + | 1,007 | 2.23 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_314818:11698-11791 | + | 404 | 0.89 | GCUCACCUCUCUCUCUGUCAGC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156h-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_314818:11698-11791 | + | 404 | 0.89 | GCUCACCUCUCUCUCUGUCAGC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156j-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_314818:38052-38139 | + | 28,380 | 62.72 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR396e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_316217:23887-23993 | + | 80,025 | 176.84 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR396b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_316217:32678-32841 | - | 349,195 | 771.67 | UUCCACAGCUUUCUUGAACAG | miR396 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR396a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg15_316217:32684-32832 | - | 349,194 | 771.66 | UUCCACAGCUUUCUUGAACAG | miR396 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR403b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_300048:668229-668342 | - | 43,822 | 96.84 | UUAGAUUCACGCACAAACUCG | miR403 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR319c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_300922:393929-394104 | - | 555,160 | 1,226.81 | CUUGGAUUGAAGGGAGCUCC | miR159 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR2118a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_300922:754808-754958 | + | 81,721 | 180.59 | CUACCGAUGCCACUAAGUCCCA | miR2118 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR2118b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_300922:754831-754937 | + | 81,708 | 180.56 | CUACCGAUGCCACUAAGUCCCA | miR2118 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR2118c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_300922:754831-754937 | + | 81,708 | 180.56 | CUACCGAUGCCACUAAGUCCCA | miR2118 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR398a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_300922:2627913-2628049 | + | 12,346 | 27.28 | CAAAGGUGUGAAACUGAGAACA | miR398 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR395c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_313497:95803-95930 | - | 10,553 | 23.32 | CUGAAGUGUUUGGGGGAACUC | miR395 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR395e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_313497:95803-95930 | - | 10,553 | 23.32 | CUGAAGUGUUUGGGGGAACUC | miR395 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR395f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_313497:95803-95930 | - | 10,553 | 23.32 | CUGAAGUGUUUGGGGGAACUC | miR395 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR395g-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_313497:106339-106490 | + | 1,194 | 2.64 | GUUCCCUUGACCACUUCAUUG | miR395 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR395h-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_313497:106596-106699 | + | 307 | 0.68 | CUGAAGUGUUUGGGGGAACUC | miR395 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR395d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_313497:112089-112230 | - | 51 | 0.11 | CUGAAGUGUUUGGGGGAACUCUU | miR395 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR395b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg16_313497:113171-113307 | + | 2,589 | 5.72 | CUGAAGUGUUUGGGGGAACUC | miR395 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR164a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_300554:3458195-3458298 | + | 330 | 0.73 | UGGAGAAGCAGGGCACAUGCC | miR164 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7128-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_301854:113560-113596 | . | 13 | 0.03 | AUCAUUAACACUUAAUAACGA | miR7128 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR7123a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_307499:2337709-2337879 | - | 1,872 | 4.14 | UUUUACCUAUCCCAUUCUGUG | miR7123 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7123b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_307499:2337709-2337879 | - | 1,872 | 4.14 | UUUUACCUAUCCCAUUCUGUG | miR7123 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR3627b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_307499:3010595-3010681 | . | 3 | 0.01 | UUUGGUCGGAGGAGAGAUGGCAAC | | siRNA24 | miRBase21-BestBlastHit |
| mdm-MIR5225a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_307499:3011544-3011687 | + | 2,510 | 5.55 | UCUGUCGAAGGUGAGAUGGUGC | miR5225 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR5225b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_307499:3011544-3011687 | + | 2,510 | 5.55 | UCUGUCGAAGGUGAGAUGGUGC | miR5225 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR5225c-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_307499:3011634-3011695 | + | 212 | 0.47 | UUCAUCCCUCCUCGACUGAAGU | miR5225 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR169e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_313414:206809-207016 | + | 8,434 | 18.64 | UAGCCAGGGAUGACUUGCCU | miR169 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR169f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_313414:206809-207016 | + | 8,434 | 18.64 | UAGCCAGGGAUGACUUGCCU | miR169 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR169c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_313414:207161-207342 | + | 8,261 | 18.26 | UAGCCAGGGAUGACUUGCCU | miR169 | siRNA20 | miRBase21-BestBlastHit |
| mdm-MIR169d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg17_313414:207161-207342 | + | 8,261 | 18.26 | UAGCCAGGGAUGACUUGCCU | miR169 | siRNA20 | miRBase21-BestBlastHit |
| mdm-MIR398c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_300285:121962-122062 | - | 241,173 | 532.95 | UGUGUUCUCAGGUCGCCCCUG | miR398 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR398b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_300285:121964-122061 | - | 241,172 | 532.95 | UGUGUUCUCAGGUCGCCCCUG | miR398 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR166a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_304761:1413491-1413662 | + | 529,797 | 1,170.77 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR166g-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_304761:1413491-1413662 | + | 529,797 | 1,170.77 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR166h-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_304761:1413629-1413662 | + | 508,713 | 1,124.17 | UCGGACCAGGCUUCAUUCCCC | miR166 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR166d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_304761:1413638-1413664 | + | 508,703 | 1,124.15 | UCGGACCAGGCUUCAUUCCCC | miR166 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR172b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_307597:182789-182903 | - | 5,823 | 12.87 | AGAAUCUUGAUGAUGCUGCAG | miR172 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172o-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_307597:182789-182903 | - | 5,823 | 12.87 | AGAAUCUUGAUGAUGCUGCAG | miR172 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR399j-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_313361:396400-396522 | + | 18,423 | 40.71 | UGCCAAAGGAGAGUUGCCCUG | miR399 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR399i-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_313361:396405-396518 | + | 18,422 | 40.71 | UGCCAAAGGAGAGUUGCCCUG | miR399 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR160e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg1_316158:112460-112547 | - | 10,657 | 23.55 | GCGUAUGAGGAGCCAUGCAUA | miR160 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2709422-2709578 | + | 384 | 0.85 | AGGGUGAUUACCAAGGGGAUG | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121g-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2709446-2709539 | + | 383 | 0.85 | AGGGUGAUUACCAAGGGGAUG | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2712573-2712693 | + | 17,692 | 39.10 | UCCUCUUGGUGAUCGCCCUGC | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2712573-2712693 | + | 17,692 | 39.10 | UCCUCUUGGUGAUCGCCCUGC | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2712573-2712693 | + | 17,692 | 39.10 | UCCUCUUGGUGAUCGCCCUGC | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121h-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2712573-2712693 | + | 17,692 | 39.10 | UCCUCUUGGUGAUCGCCCUGC | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121c-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2719054-2719174 | + | 17,698 | 39.11 | UCCUCUUGGUGAUCGCCCUGC | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121d-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2719054-2719174 | + | 17,698 | 39.11 | UCCUCUUGGUGAUCGCCCUGC | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121e-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2719054-2719174 | + | 17,698 | 39.11 | UCCUCUUGGUGAUCGCCCUGC | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121h-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2719054-2719174 | + | 17,698 | 39.11 | UCCUCUUGGUGAUCGCCCUGC | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2724644-2724775 | + | 100,994 | 223.18 | UCCUCUUGGUGAUCGCCCUGU | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7121g-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:2724663-2724756 | + | 100,992 | 223.18 | UCCUCUUGGUGAUCGCCCUGU | miR7121 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156ad-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:6342274-6342387 | + | 600 | 1.33 | UGACAGAAGAAAGUGAGCAC | miR156 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR156ae-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_302643:6342274-6342387 | + | 600 | 1.33 | UGACAGAAGAAAGUGAGCAC | miR156 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR156f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_313555:394679-394888 | + | 341 | 0.75 | GCUCAUGUCUCUUUCUGUCAGC | miR156 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR397a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_313618:16005-16105 | + | 6,762 | 14.94 | UUUCGUCAGCUGUGCACCCAA | miR397 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR477a-m3 | Malus x domestica (Apple) 3.0 | Scaffold_lg2_313697:103383-103405 | - | 1 | 0.00 | UUGAUUAAACCAAAUAUACC | | siRNA20 | miRBase21-BestBlastHit |
| mdm-MIR167d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg3_300437:784976-785080 | - | 2,915 | 6.44 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR167e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg3_300437:789950-790073 | - | 17,492 | 38.66 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR172l-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg3_301974:449347-449528 | - | 5,326 | 11.77 | GCAGCAUCAUCAAGAUUCACAU | miR172 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR159a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg3_310100:626333-626455 | . | 1,081 | 2.39 | UUGGAUUGAAGGGAGCUCC | miR159 | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR159b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg3_310100:626333-626455 | . | 1,081 | 2.39 | UUGGAUUGAAGGGAGCUCC | miR159 | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR159c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg3_310100:626333-626455 | . | 1,081 | 2.39 | UUGGAUUGAAGGGAGCUCC | miR159 | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR156w-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg3_313717:116493-116582 | + | 4,832 | 10.68 | UUGACAGAAGAGAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR390e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg4_306330:522883-522985 | + | 25,301 | 55.91 | AAGCUCAGGAGGGAUAGCGCC | miR390 | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR390f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg4_306330:522883-522985 | + | 25,301 | 55.91 | AAGCUCAGGAGGGAUAGCGCC | miR390 | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR156q-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg4_313370:4219-4306 | - | 25,367 | 56.06 | CUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156s-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg4_313370:4219-4306 | - | 25,367 | 56.06 | CUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156y-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg4_313370:4219-4306 | - | 25,367 | 56.06 | CUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156aa-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg4_313370:4219-4306 | - | 25,367 | 56.06 | CUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR164d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg4_313736:12521-12655 | - | 10,104 | 22.33 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR403a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg4_315040:28875-28989 | - | 53,488 | 118.20 | UUAGAUUCACGCACAAACUCG | miR403 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR166e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg5_305721:390547-390643 | + | 12,145,364 | 26,839.30 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR166i-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg5_305721:390547-390643 | + | 12,145,364 | 26,839.30 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR399a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg5_313690:2495-2609 | + | 174,343 | 385.27 | UGCCAAAGGAGAAUUGCCCUG | miR399 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR399b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg5_313690:2495-2609 | + | 174,343 | 385.27 | UGCCAAAGGAGAAUUGCCCUG | miR399 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR399c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg5_313690:2495-2609 | + | 174,343 | 385.27 | UGCCAAAGGAGAAUUGCCCUG | miR399 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR399g-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg5_313690:22343-22465 | - | 23,564 | 52.07 | UGCCAAAGGAGAUUUGCUCGG | miR399 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR399h-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg5_313690:22343-22465 | - | 23,564 | 52.07 | UGCCAAAGGAGAUUUGCUCGG | miR399 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR482a-m3 | Malus x domestica (Apple) 3.0 | Scaffold_lg6_301751:3884018-3884077 | - | 58 | 0.13 | CAAACUCUAAACCCUAAAACUCC | | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR162b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg6_304089:3376619-3376712 | - | 34,369 | 75.95 | UCGAUAAACCUCUGCAUCCAG | miR162 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR168b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg6_313496:69857-70048 | + | 141,995 | 313.79 | UCGCUUGGUGCAGGUCGGGAA | miR168 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR156ab-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg6_313552:15612-15791 | + | 595,672 | 1,316.34 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR166b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg6_314817:14854-14946 | - | 317,705 | 702.08 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR166d-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg6_314817:14855-14886 | - | 317,507 | 701.64 | UCGGACCAGGCUUCAUUCCCC | miR166 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR828a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg7_300794:4188058-4188199 | - | 2,132 | 4.71 | UCUUGCUCAAAUGAGUAUUCCA | miR828 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR828b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg7_300794:4188058-4188199 | - | 2,132 | 4.71 | UCUUGCUCAAAUGAGUAUUCCA | miR828 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR166d-m3 | Malus x domestica (Apple) 3.0 | Scaffold_lg7_301368:619254-619280 | - | 87,906 | 194.26 | UCGGACCAGGCUUCAUUCCCC | miR166 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR393b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg7_313353:96439-96559 | + | 107,423 | 237.39 | UCCAAAGGGAUCGCAUUGAUCU | miR393 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR393c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg7_313353:96439-96559 | + | 107,423 | 237.39 | UCCAAAGGGAUCGCAUUGAUCU | miR393 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR393d-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg7_313353:96439-96559 | + | 107,423 | 237.39 | UCCAAAGGGAUCGCAUUGAUCU | miR393 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR393e-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg7_313353:96439-96559 | + | 107,423 | 237.39 | UCCAAAGGGAUCGCAUUGAUCU | miR393 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR393a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg7_313353:96440-96558 | + | 107,423 | 237.39 | UCCAAAGGGAUCGCAUUGAUCU | miR393 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR393f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg7_313353:96440-96558 | + | 107,423 | 237.39 | UCCAAAGGGAUCGCAUUGAUCU | miR393 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7126-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg7_315255:129180-129327 | + | 152 | 0.34 | CCGCAAUGACAGGCCAUCCAAUUCUAUACACUUGAUAUGAGCCCC | | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR394a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg8_302330:500578-500725 | + | 5,674 | 12.54 | UUGGCAUUCUGUCCACCUCC | miR394 | siRNA21 | miRBase21-BestBlastHit |
| mdm-MIR171c-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg8_302330:555620-555741 | + | 5,377 | 11.88 | UGAUUGAGCCGCGCCAAUAUC | miR171 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR171a-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg8_302330:555710-555737 | + | 5,124 | 11.32 | UGAUUGAGCCGCGCCAAUAUC | miR171 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR171b-m2 | Malus x domestica (Apple) 3.0 | Scaffold_lg8_302330:555710-555737 | + | 5,124 | 11.32 | UGAUUGAGCCGCGCCAAUAUC | miR171 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR156k-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg8_303171:1898376-1898520 | - | 338 | 0.75 | GCUCAUGUCUCUUUCUGUCAGC | miR156 | nearMIRNA | miRBase21-BestBlastHit |
| mdm-MIR477a-m5 | Malus x domestica (Apple) 3.0 | Scaffold_lg8_305535:4524-4546 | + | 2 | 0.00 | AGAUAACAGAGGGACGCUUAGACU | | siRNA24 | miRBase21-BestBlastHit |
| mdm-MIR477a-m4 | Malus x domestica (Apple) 3.0 | Scaffold_lg8_305535:17331-17353 | . | 19 | 0.04 | AGAUAACAGUGACACGCUCAGACU | | siRNA24 | miRBase21-BestBlastHit |
| mdm-MIR477a-m6 | Malus x domestica (Apple) 3.0 | Scaffold_lg8_314097:126789-126811 | - | 3 | 0.01 | UCCCCCACAAUCUAACACCCU | | OtherRNA | miRBase21-BestBlastHit |
| mdm-MIR171i-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg9_300219:6260659-6260681 | . | 11 | 0.02 | AGUAGAAUUAUCAGAGAUAUGAGC | | siRNA24 | miRBase21-BestBlastHit |
| mdm-MIR171f-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg9_300219:7272405-7272506 | - | 3,743 | 8.27 | GGAUAUUGGUCCGGUUCAAUA | miR171 | MIRNA | miRBase21-BestBlastHit |
| mdm-MIR7120a-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg9_305678:894846-894914 | . | 11,485 | 25.38 | UCUAACAUGUUAUGUUGUCAGACU | | siRNA24 | miRBase21-BestBlastHit |
| mdm-MIR7120b-m1 | Malus x domestica (Apple) 3.0 | Scaffold_lg9_305678:894846-894914 | . | 11,485 | 25.38 | UCUAACAUGUUAUGUUGUCAGACU | | siRNA24 | miRBase21-BestBlastHit |
Data from Lunardon et al. (2020)