het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Nicotiana tabacum (Tobacco) genome build 0 (nta-b0)

Version v0 of Nicotiana tabacum cv. K326 from The Sol Genomics Network

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
nta-MIR395c-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS18379:6917-7029-10.01UAGAGUUCUCCUGAUCACUUAmiR395siRNA21miRBase21-BestBlastHit
nta-MIR172e-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS19498:150574-150922+6,67033.29AGAAUCUUGAUGAUGCUGCAUmiR172siRNA21miRBase21-BestBlastHit
nta-MIR399b-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS244:450725-450833+10.01AACAGUGAUAGGGCUACUCCCmiR399siRNA21miRBase21-BestBlastHit
nta-MIR160a-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS4322:162175-162277-300.15CGUGAAUGGCGUAUGAGGAGCmiR160siRNA21miRBase21-BestBlastHit
nta-MIR477b-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS5140:6048-6130-1830.91UGUCUCUCCCUCAAGGGCUUCmiR477siRNA21miRBase21-BestBlastHit
nta-MIR169s-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS5805:18271-18479-1,0885.43CGGCAGGUCGUCCUUGGCUACmiR169siRNA21miRBase21-BestBlastHit
nta-MIR168d-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS6295:26036-26393-75,059374.56UCGCUUGGUGCAGGUCGGGAAmiR168siRNA21miRBase21-BestBlastHit
nta-MIR168e-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS64841:45-377+13,37866.76CCCGCCUUGCAUCAACUGAAUmiR168siRNA21miRBase21-BestBlastHit
nta-MIR6025a-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS736:2121439-2121589+14,87574.23UGGAUGUUAUCUCAGUGUUGGmiR6025siRNA21miRBase21-BestBlastHit
nta-MIR6025d-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS7969:154695-154817+3,99819.95UGGAUGUUAUCUCAGUGUUGGmiR6025siRNA21miRBase21-BestBlastHit
nta-MIR160b-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS812:606889-606991-1000.50UGCCUGGCUCCCUGUAUGCCAmiR160siRNA21miRBase21-BestBlastHit
nta-MIR6021-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS942:61653-61816+144,696722.06UUGGAAGAGGCUGCUAUUGGAmiR6021siRNA21miRBase21-BestBlastHit