het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Nicotiana tabacum (Tobacco) genome build 0 (nta-b0)

Version v0 of Nicotiana tabacum cv. K326 from The Sol Genomics Network

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
nta-MIR6156-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS11037:46469-46575-700.35AACAGAAAUAGGACAUCUUCAmiR6156nearMIRNAmiRBase21-BestBlastHit
nta-MIR169t-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS11805:62932-63046+3,49017.42UGGCAAGCAUCUUUGGCGACUmiR169nearMIRNAmiRBase21-BestBlastHit
nta-MIR408-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS1201:947671-947761-76,642382.46ACGAGGUAGAGCAUGAGAUGUGCAmiR408nearMIRNAmiRBase21-BestBlastHit
nta-MIR171b-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS16094:117612-117716+2311.15UUGAGCCGCGCCAAUAUCACUmiR171nearMIRNAmiRBase21-BestBlastHit
nta-MIR6155-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS181175:5529-5650-30.02UAAGGUUGCCUUGCUCUUGCAmiR6155nearMIRNAmiRBase21-BestBlastHit
nta-MIR399e-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS19534:58171-58285+150.08CGCCAAAGGAGAGCUGCCCUGmiR399nearMIRNAmiRBase21-BestBlastHit
nta-MIR6151a-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS267:375385-375455+60.03AAUCCGAGCCCUACAUUCAUCmiR6151nearMIRNAmiRBase21-BestBlastHit
nta-MIR6151b-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS279373:407-477-390.20AAUCCGAGCCCUACAUUCAUCmiR6151nearMIRNAmiRBase21-BestBlastHit
nta-MIR169f-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS5805:18871-19080-2231.11CAGCCAAGGAUGACUUGCCGAmiR169nearMIRNAmiRBase21-BestBlastHit
nta-MIR169o-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS5805:18871-19080-2231.11CAGCCAAGGAUGACUUGCCGAmiR169nearMIRNAmiRBase21-BestBlastHit
nta-MIR166b-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS5910:56370-56508-8194.09GGAAUGUUGUCUGGCUCGAAGmiR166nearMIRNAmiRBase21-BestBlastHit
nta-MIR394-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS8966:116616-116703-510.26UUGGCAUUCUGUCCACCUCCmiR394nearMIRNAmiRBase21-BestBlastHit
nta-MIR399a-m1Nicotiana tabacum (Tobacco) 0Ntab-K326_AWOJ-SS9947:24078-24185+100.05CGCCAAAGGAGAGCUGCCCUGmiR399nearMIRNAmiRBase21-BestBlastHit