Data from Lunardon et al. (2020)

Annotations viewer

Genome

Zea mays (Maize) genome build 4 (zma-b4)

Version AGPv4 of Zea Mays cv. B73 from Ensembl Plants

Locus type

Annotation source

Name contains:

Family contains:

Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
zma-MIR159e	Zea mays (Maize) 4	1:249664337-249664463	.	76	0.03	GAGCUCCCUUCAAACCAAUA	miR159	OtherRNA	miRBase21
zma-MIR395d	Zea mays (Maize) 4	2:6276291-6276356	.	60	0.03	UGAAGUGUUUGGGGGAACUC	miR395	OtherRNA	miRBase21
zma-MIR395g	Zea mays (Maize) 4	2:6277107-6277172	.	24	0.01	GCUCUUGAAAGAAUGCCU	miR395	OtherRNA	miRBase21
zma-MIR398a	Zea mays (Maize) 4	2:174319898-174320037	+	8,040	3.46	GGGGCGAACUGAGAACACAUG	miR398	OtherRNA	miRBase21
zma-MIR169j	Zea mays (Maize) 4	2:198435908-198436058	+	1,494	0.64	GGCAGUCUCCUUGGCUAGU	miR169	OtherRNA	miRBase21
zma-MIR2275d	Zea mays (Maize) 4	2:207980073-207980192	+	31	0.01	UUUGUUUUCCUCUAAUAUCUCA	miR2275	OtherRNA	miRBase21
zma-MIR160f	Zea mays (Maize) 4	2:241093436-241093551	-	408	0.18	UGCCUGGCUCCCUGUAUGCCG	miR160	OtherRNA	miRBase21
zma-MIR159c	Zea mays (Maize) 4	3:2020760-2020976	-	55,654	23.93	UUGGAUUGAAGGGAGCUCC	miR159	OtherRNA	miRBase21
zma-MIR159f	Zea mays (Maize) 4	3:25007834-25008048	-	2,889,507	1,242.45	UUUGGAUUGAAGGGAGCUCUG	miR159	OtherRNA	miRBase21
zma-MIR169i	Zea mays (Maize) 4	4:49299338-49299528	+	12,309	5.29	GGCAGUCUCCUUGGCUAGC	miR169	OtherRNA	miRBase21
zma-MIR169d	Zea mays (Maize) 4	4:49565639-49565766	+	2,179	0.94	GGCAGUCUCCUUGGCUAGC	miR169	OtherRNA	miRBase21
zma-MIR169h	Zea mays (Maize) 4	4:49625355-49625482	+	1,265	0.54	GGCAGUCUCCUUGGCUAGC	miR169	OtherRNA	miRBase21
zma-MIR169e	Zea mays (Maize) 4	4:49625356-49625483	+	1,265	0.54	GGCAGUCUCCUUGGCUAGC	miR169	OtherRNA	miRBase21
zma-MIR396a	Zea mays (Maize) 4	4:176326883-176327019	+	94,294	40.55	UUCCACAGCUUUCUUGAACUG	miR396	OtherRNA	miRBase21
zma-MIR396g	Zea mays (Maize) 4	5:220222148-220222261	-	85,501	36.76	UUCCACAGCUUUCUUGAACUG	miR396	OtherRNA	miRBase21
zma-MIR398b	Zea mays (Maize) 4	7:39887938-39888045	+	55,698	23.95	UGUGUUCUCAGGUCGCCCCCG	miR398	OtherRNA	miRBase21
zma-MIR169k	Zea mays (Maize) 4	7:142286603-142286735	+	38,210	16.43	UGGCGAUGAGAGCACUGCUCUGG		OtherRNA	miRBase21
zma-MIR159a	Zea mays (Maize) 4	8:10753073-10753318	+	1,536,117	660.51	UUUGGAUUGAAGGGAGCUCUG	miR159	OtherRNA	miRBase21
zma-MIR159k	Zea mays (Maize) 4	8:10947058-10947257	+	148,484	63.85	UUUGGAUUGAAGGGAGCUCUG	miR159	OtherRNA	miRBase21
zma-MIR159d	Zea mays (Maize) 4	8:27675686-27675902	+	65,013	27.96	CUUGGAUUGAAGGGAG	miR159	OtherRNA	miRBase21
zma-MIR396b	Zea mays (Maize) 4	9:15122740-15122875	-	17,670	7.60	UUCCACAGCUUUCUUGAACUG	miR396	OtherRNA	miRBase21
zma-MIR396h	Zea mays (Maize) 4	9:15122758-15122881	-	17,669	7.60	UUCCACAGCUUUCUUGAACUG	miR396	OtherRNA	miRBase21