Data from Lunardon et al. (2020)

Annotations viewer

Genome

Arabidopsis thaliana (thale cress) genome build 10 (ath-b10)

TAIR10 assembly of Arabidopsis thaliana Col-0 ecotype from Phytozome.

Locus type

Annotation source

Name contains:

Family contains:

Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
ath-MIR394a	Arabidopsis thaliana (thale cress) 10	1:7058193-7058309	+	3,152	9.57	UUGGCAUUCUGUCCACCUCC	miR394	nearMIRNA	miRBase
ath-MIR5999	Arabidopsis thaliana (thale cress) 10	1:7400802-7400992	-	34	0.10	UCUUCACUAUUAGACGGACAA	miR5999	nearMIRNA	miRBase
ath-MIR394b	Arabidopsis thaliana (thale cress) 10	1:28568807-28568927	+	9,325	28.32	UUGGCAUUCUGUCCACCUCC	miR394	nearMIRNA	miRBase
ath-MIR3440b	Arabidopsis thaliana (thale cress) 10	3:6217476-6217600	+	1,064	3.23	UGGAUUGGUCAAGGGAAGCGU	miR3440	nearMIRNA	miRBase
ath-MIR8182	Arabidopsis thaliana (thale cress) 10	3:22678152-22678279	+	144	0.44	UUGUGUUGCGUUUCUGUUGAUU	miR8182	nearMIRNA	miRBase
ath-MIR447a	Arabidopsis thaliana (thale cress) 10	4:1528134-1528370	-	23,489	71.34	UAUGGAAGAAAUUGUAGUAUU	miR447	nearMIRNA	miRBase
ath-MIR397a	Arabidopsis thaliana (thale cress) 10	4:2625950-2626056	+	7,460	22.66	UCAUUGAGUGCAGCGUUGAUGU	miR397	nearMIRNA	miRBase
ath-MIR4243	Arabidopsis thaliana (thale cress) 10	5:19567208-19567386	+	572	1.74	UUGAAAUUGUAGAUUUCGUACU		nearMIRNA	miRBase