het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Marchantia polymorpha (Common Liverwort) genome build 3.0 (mpo-b3.0)

Version 3.0 genome assembly from Phytozome 12

Locus type

Annotation source

Name contains:

Family contains:

NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
mpo-b3.0r1-1167Marchantia polymorpha (Common Liverwort) 3.0Chr_Y_A:1117319-1117451+1805.49CUAGAGCUAAUACGUGCACCsiRNA20ShortStack
mpo-b3.0r1-334Marchantia polymorpha (Common Liverwort) 3.0scaffold_1:3082474-3082796+33710.27AGGUAUGGAAUGAGGAGGAGsiRNA20ShortStack
mpo-b3.0r1-16157Marchantia polymorpha (Common Liverwort) 3.0scaffold_101:130441-130575-1113.38UGAAGCAUUGGCCGUUUUUCsiRNA20ShortStack
mpo-b3.0r1-16246Marchantia polymorpha (Common Liverwort) 3.0scaffold_102:205276-205426-42012.80CGGUGACGAAGCUUUUGCCUsiRNA20ShortStack
mpo-b3.0r1-16784Marchantia polymorpha (Common Liverwort) 3.0scaffold_110:366694-366815-250.76CAAGAACUCCACUUCAAUUUsiRNA20ShortStack
mpo-b3.0r1-21043Marchantia polymorpha (Common Liverwort) 3.0scaffold_1254:3750-4146-125,6313,828.28AUGGUGCUCCACAUCGACUGsiRNA20ShortStack
mpo-b3.0r1-17863Marchantia polymorpha (Common Liverwort) 3.0scaffold_126:253191-253276+331.01GGAGAGAUGUCCGAGUGGACsiRNA20ShortStack
mpo-b3.0r1-4933Marchantia polymorpha (Common Liverwort) 3.0scaffold_14:2145777-2146170-62619.08UGACAGAAGAGAGUGAGCACmiR156siRNA20ShortStack
mpo-b3.0r1-18761Marchantia polymorpha (Common Liverwort) 3.0scaffold_144:386012-386468-2,48775.79ACGGGCAGCUGGUGAGAAGCsiRNA20ShortStack
mpo-b3.0r1-18763Marchantia polymorpha (Common Liverwort) 3.0scaffold_145:67323-67347-190.58GGUCCAGUAGCUCAAUGAACsiRNA20ShortStack
mpo-b3.0r1-19738Marchantia polymorpha (Common Liverwort) 3.0scaffold_170:230267-230524-351.07AGCUGACUGAAGGAAGUGCAsiRNA20ShortStack
mpo-b3.0r1-19770Marchantia polymorpha (Common Liverwort) 3.0scaffold_171:153495-153655-230.70CUGAGAUGCGGACUUAACUCsiRNA20ShortStack
mpo-b3.0r1-20053Marchantia polymorpha (Common Liverwort) 3.0scaffold_184:71791-72017-1083.29AGACGAGAAGAGAGCAGAGCsiRNA20ShortStack
mpo-b3.0r1-20237Marchantia polymorpha (Common Liverwort) 3.0scaffold_192:78663-78687-300.91UCUAUUUGUGUGGUCUGUUUsiRNA20ShortStack
mpo-b3.0r1-885Marchantia polymorpha (Common Liverwort) 3.0scaffold_2:1749362-1749390+631.92UCGAGUAAACAUGGCAAGAGsiRNA20ShortStack
mpo-b3.0r1-6344Marchantia polymorpha (Common Liverwort) 3.0scaffold_23:661289-661351-63219.26CGGGCGUCAGACAAACCAUUsiRNA20ShortStack
mpo-b3.0r1-6804Marchantia polymorpha (Common Liverwort) 3.0scaffold_26:706718-706848+2,81085.63GGAUGUGUCUGAAGUGGCUCsiRNA20ShortStack
mpo-b3.0r1-7595Marchantia polymorpha (Common Liverwort) 3.0scaffold_31:212441-212523+220.67UGAACUGGCUAAAACCGCCUsiRNA20ShortStack
mpo-b3.0r1-7625Marchantia polymorpha (Common Liverwort) 3.0scaffold_31:467347-467531+1163.54CAAAUGUUGGGAUUGUUCCAsiRNA20ShortStack
mpo-b3.0r1-8260Marchantia polymorpha (Common Liverwort) 3.0scaffold_34:432502-432624+170.52AGUGUGCCCAAGCCUCUGGUGGAsiRNA20ShortStack
mpo-b3.0r1-8270Marchantia polymorpha (Common Liverwort) 3.0scaffold_34:560880-561570-11,308344.58GGAAUUGUGACAGUAAGGGCsiRNA20ShortStack
mpo-b3.0r1-8296Marchantia polymorpha (Common Liverwort) 3.0scaffold_34:1050081-1050173+431.31CUGACCUCAUGAGCGUCACCsiRNA20ShortStack
mpo-b3.0r1-9202Marchantia polymorpha (Common Liverwort) 3.0scaffold_40:699114-699442-591.80AAAUCUCGGGAUUGCUACUCsiRNA20ShortStack
mpo-b3.0r1-9276Marchantia polymorpha (Common Liverwort) 3.0scaffold_40:1534405-1534605+2286.95UUCGGCUGGUAGGGACAGGCsiRNA20ShortStack
mpo-b3.0r1-9309Marchantia polymorpha (Common Liverwort) 3.0scaffold_41:268644-268663-270.82CUGACCUCAUGAGCGUCACCsiRNA20ShortStack
mpo-b3.0r1-9638Marchantia polymorpha (Common Liverwort) 3.0scaffold_43:724495-724778.331.01CAUGGAUCCGUCGGGGUGCAsiRNA20ShortStack
mpo-b3.0r1-9776Marchantia polymorpha (Common Liverwort) 3.0scaffold_44:119565-119759+180.55AGGGCGAGGACGAGGAUGAGAAsiRNA20ShortStack
mpo-b3.0r1-10276Marchantia polymorpha (Common Liverwort) 3.0scaffold_47:1191973-1192018+210.64UUUGGCUUCUCUGAACGCUUsiRNA20ShortStack
mpo-b3.0r1-10541Marchantia polymorpha (Common Liverwort) 3.0scaffold_49:1202126-1202515.742.26UCGAGUCUUCUCAUGCGGCUsiRNA20ShortStack
mpo-b3.0r1-2145Marchantia polymorpha (Common Liverwort) 3.0scaffold_5:1643046-1643145.1374.18CAGGAAGAGAACAGGUCCAAsiRNA20ShortStack
mpo-b3.0r1-11363Marchantia polymorpha (Common Liverwort) 3.0scaffold_55:1194403-1195262-35910.94UCCCAUUGAUUGAUAAACUGsiRNA20ShortStack
mpo-b3.0r1-11472Marchantia polymorpha (Common Liverwort) 3.0scaffold_56:968549-968748-230.70CAGGUGACAGACGGUAGACCsiRNA20ShortStack
mpo-b3.0r1-20893Marchantia polymorpha (Common Liverwort) 3.0scaffold_637:4629-4925.541.65UCUCCAAGUUGAUAGAUGUUsiRNA20ShortStack
mpo-b3.0r1-13076Marchantia polymorpha (Common Liverwort) 3.0scaffold_69:331764-331958-491.49AAGGAGACUGUGACCUGCUUsiRNA20ShortStack
mpo-b3.0r1-13082Marchantia polymorpha (Common Liverwort) 3.0scaffold_69:373166-373605-6,081185.30CAAAACUACCUCCCGCUCGCsiRNA20ShortStack
mpo-b3.0r1-2948Marchantia polymorpha (Common Liverwort) 3.0scaffold_7:2550541-2550658-25,549778.54UUUGGCUUCUCUGAACGCGGsiRNA20ShortStack
mpo-b3.0r1-2975Marchantia polymorpha (Common Liverwort) 3.0scaffold_7:2690262-2690979+271,3568,268.87UGCCAUGCCAAUCUUCGGGCsiRNA20ShortStack
mpo-b3.0r1-13520Marchantia polymorpha (Common Liverwort) 3.0scaffold_73:316085-316165+391.19CUGACCUCAUGAGCGUCACCsiRNA20ShortStack
mpo-b3.0r1-13587Marchantia polymorpha (Common Liverwort) 3.0scaffold_73:1001369-1001426+3,22198.15GACGGCGGUGAAAGAUCGAAsiRNA20ShortStack
mpo-b3.0r1-14561Marchantia polymorpha (Common Liverwort) 3.0scaffold_83:120982-121063.541.65UCAGUUGUUGGUCUCGAGCCCUsiRNA20ShortStack
mpo-b3.0r1-14666Marchantia polymorpha (Common Liverwort) 3.0scaffold_83:761579-761763-210.64GGAUCGGACGACAAGGAUGCCAGCAACAsiRNA20ShortStack
mpo-b3.0r1-15026Marchantia polymorpha (Common Liverwort) 3.0scaffold_87:613000-613625.341.04AUCAAUCUUACGACUGCUUCsiRNA20ShortStack
mpo-b3.0r1-15797Marchantia polymorpha (Common Liverwort) 3.0scaffold_96:246126-246155+381.16GAAGACGGAGAAGUCUGGCCsiRNA20ShortStack