het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Marchantia polymorpha (Common Liverwort) genome build 3.0 (mpo-b3.0)

Version 3.0 genome assembly from Phytozome 12

Locus type

Annotation source

Name contains:

Family contains:

NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
mpo-b3.0r1-3701Marchantia polymorpha (Common Liverwort) 3.0scaffold_10:1301791-1301826+170.52GACUCGGUAUAGUUGAUGGACACnearMIRNAShortStack
mpo-b3.0r1-3753Marchantia polymorpha (Common Liverwort) 3.0scaffold_10:2080949-2081033-200.61UGCGACAAGCAUGCCUGACCCnearMIRNAShortStack
mpo-b3.0r1-16124Marchantia polymorpha (Common Liverwort) 3.0scaffold_100:562962-563179+2,17766.34ACACAUGCGGACAAUAGGUAUnearMIRNAShortStack
mpo-b3.0r1-16483Marchantia polymorpha (Common Liverwort) 3.0scaffold_105:357522-357601-210.64CCGUAGAUGGGGUCCCAUCGGGUnearMIRNAShortStack
mpo-b3.0r1-16560Marchantia polymorpha (Common Liverwort) 3.0scaffold_106:385761-385961+1785.42ACCAUGAACUCAAACGUACCCAnearMIRNAShortStack
mpo-b3.0r1-16734Marchantia polymorpha (Common Liverwort) 3.0scaffold_109:451954-452045-220.67ACGAUCGGCAGGAGCAGCAGCACAnearMIRNAShortStack
mpo-b3.0r1-3914Marchantia polymorpha (Common Liverwort) 3.0scaffold_11:1206053-1206352-2276.92UCCAUAUCGUUGGAGAGCAUAnearMIRNAShortStack
mpo-b3.0r1-3948Marchantia polymorpha (Common Liverwort) 3.0scaffold_11:1553962-1554216+64819.75AUAUAGAAUCUCCUGGGGCAUnearMIRNAShortStack
mpo-b3.0r1-16801Marchantia polymorpha (Common Liverwort) 3.0scaffold_111:56123-56225+2036.19AUUUAGAUGUGUGUUUCAGGCnearMIRNAShortStack
mpo-b3.0r1-17020Marchantia polymorpha (Common Liverwort) 3.0scaffold_113:600424-600511+210.64UUUAACCAGGAUAGGAUUAAGnearMIRNAShortStack
mpo-b3.0r1-17241Marchantia polymorpha (Common Liverwort) 3.0scaffold_116:167828-168055+601.83AUGUUCUGUGGGCACUUUCUCnearMIRNAShortStack
mpo-b3.0r1-4185Marchantia polymorpha (Common Liverwort) 3.0scaffold_12:900072-900241+7,690234.33UCUGUGAUAGUUUCGGAUGGUnearMIRNAShortStack
mpo-b3.0r1-17831Marchantia polymorpha (Common Liverwort) 3.0scaffold_125:507340-507589-39412.01UUUGUGGGAGUGCUUGUUUGAnearMIRNAShortStack
mpo-b3.0r1-18263Marchantia polymorpha (Common Liverwort) 3.0scaffold_134:128704-128781-3,533107.66UGGACAGGAGAACGUUAGGUAnearMIRNAShortStack
mpo-b3.0r1-4754Marchantia polymorpha (Common Liverwort) 3.0scaffold_14:1082431-1082660-631.92CGAGGACAAGGCGAUGAUCAnearMIRNAShortStack
mpo-b3.0r1-18708Marchantia polymorpha (Common Liverwort) 3.0scaffold_143:250611-250707-762.32UGAGGUCGUAGAGUUGUAGCUnearMIRNAShortStack
mpo-b3.0r1-18753Marchantia polymorpha (Common Liverwort) 3.0scaffold_144:309348-309413+250.76UUAUGGAGGAAUUUCAGCAUCnearMIRNAShortStack
mpo-b3.0r1-4974Marchantia polymorpha (Common Liverwort) 3.0scaffold_15:368381-368492+11,230342.21UCAGGAACUGGCGAUGGAUUCnearMIRNAShortStack
mpo-b3.0r1-19324Marchantia polymorpha (Common Liverwort) 3.0scaffold_157:145653-145871+38311.67UCUGAGUGGAAAUUAGUGCAAnearMIRNAShortStack
mpo-b3.0r1-19643Marchantia polymorpha (Common Liverwort) 3.0scaffold_167:288470-288503+772.35UGUAAUUGGAUCUGAGAACCUnearMIRNAShortStack
mpo-b3.0r1-19815Marchantia polymorpha (Common Liverwort) 3.0scaffold_173:134785-134815+180.55UCUAUCAAGAGCCCUUGGACGnearMIRNAShortStack
mpo-b3.0r1-19832Marchantia polymorpha (Common Liverwort) 3.0scaffold_173:205830-205929-541.65AUGGUCGAAUGCGAAGAGGGAGnearMIRNAShortStack
mpo-b3.0r1-893Marchantia polymorpha (Common Liverwort) 3.0scaffold_2:1818441-1818520-1,09833.46CUGUUUGUGGAUUUGUGUUAGnearMIRNAShortStack
mpo-b3.0r1-1135Marchantia polymorpha (Common Liverwort) 3.0scaffold_2:3480891-3481054-1073.26AAGGAGGGCAGCGGAGAGGGAnearMIRNAShortStack
mpo-b3.0r1-5718Marchantia polymorpha (Common Liverwort) 3.0scaffold_20:102057-102159+361.10UGGAUCCUAGUAGAGGAUUGAnearMIRNAShortStack
mpo-b3.0r1-6016Marchantia polymorpha (Common Liverwort) 3.0scaffold_21:1166838-1166860+170.52CUCACAAAUGAGGGCUGGAAUnearMIRNAShortStack
mpo-b3.0r1-20453Marchantia polymorpha (Common Liverwort) 3.0scaffold_214:81326-81587-89527.27UUGGAACACAUUGACAGGCUUnearMIRNAShortStack
mpo-b3.0r1-6336Marchantia polymorpha (Common Liverwort) 3.0scaffold_23:556672-556729+70821.57UCCGGUGCGAAGAAGACAAGCnearMIRNAShortStack
mpo-b3.0r1-6492Marchantia polymorpha (Common Liverwort) 3.0scaffold_24:307451-307598-401.22UAAUGGGCAAGCAGGUUGGCAAACnearMIRNAShortStack
mpo-b3.0r1-20638Marchantia polymorpha (Common Liverwort) 3.0scaffold_251:19808-19993+1504.57UUGCGUGAUGACCAAAUGUUGnearMIRNAShortStack
mpo-b3.0r1-7055Marchantia polymorpha (Common Liverwort) 3.0scaffold_27:1733884-1734102+51715.75AGUUCAUUCGAAGACUGGCUCnearMIRNAShortStack
mpo-b3.0r1-1323Marchantia polymorpha (Common Liverwort) 3.0scaffold_3:743936-744051-57317.46UGGCAAGGACGAUAUAACAAGnearMIRNAShortStack
mpo-b3.0r1-1332Marchantia polymorpha (Common Liverwort) 3.0scaffold_3:891210-891298-501.52CCAUCCCUUGCAAGCGGCUAGnearMIRNAShortStack
mpo-b3.0r1-1473Marchantia polymorpha (Common Liverwort) 3.0scaffold_3:2266296-2266408-471.43CCGAUUUGCAACAAAGUGUCCGAUnearMIRNAShortStack
mpo-b3.0r1-7521Marchantia polymorpha (Common Liverwort) 3.0scaffold_30:1129733-1129765-361.10UGGGGAAUAGCAAGCUGCGAGAnearMIRNAShortStack
mpo-b3.0r1-7870Marchantia polymorpha (Common Liverwort) 3.0scaffold_32:560288-560441-45713.93UACCGCGUCGGAUGCCCAGAGnearMIRNAShortStack
mpo-b3.0r1-8009Marchantia polymorpha (Common Liverwort) 3.0scaffold_33:142300-142519-3179.66GGGCGCCAGGACGAGGAGAGGnearMIRNAShortStack
mpo-b3.0r1-8024Marchantia polymorpha (Common Liverwort) 3.0scaffold_33:197120-197145+2016.13UGCACAUUCUUUUCUUGGAAGnearMIRNAShortStack
mpo-b3.0r1-8081Marchantia polymorpha (Common Liverwort) 3.0scaffold_33:831389-831532+1524.63ACUCACACCAUCGGGCAGACUGnearMIRNAShortStack
mpo-b3.0r1-8193Marchantia polymorpha (Common Liverwort) 3.0scaffold_33:1538647-1538786-391.19AGAGCGGGGGCAGUGGACGGGGCnearMIRNAShortStack
mpo-b3.0r1-8420Marchantia polymorpha (Common Liverwort) 3.0scaffold_35:744992-745123+551.68CUAAACUCAUGAAGCUUGGUGnearMIRNAShortStack
mpo-b3.0r1-8517Marchantia polymorpha (Common Liverwort) 3.0scaffold_36:138206-138296+1003.05CUCUUUAAUCCCAACUCCACCnearMIRNAShortStack
mpo-b3.0r1-20786Marchantia polymorpha (Common Liverwort) 3.0scaffold_376:3522-3556+220.67CAAGGAUAUGGCAACCAGACUnearMIRNAShortStack
mpo-b3.0r1-1658Marchantia polymorpha (Common Liverwort) 3.0scaffold_4:808776-808915+1484.51AGAAUUUCUAUGAUUGUGGCGnearMIRNAShortStack
mpo-b3.0r1-9216Marchantia polymorpha (Common Liverwort) 3.0scaffold_40:979282-979330-581.77CGAAGAGGAGAGGGAUGCAGAnearMIRNAShortStack
mpo-b3.0r1-9331Marchantia polymorpha (Common Liverwort) 3.0scaffold_41:494463-494552+1,14234.80UCCCUGGACUUCCAAAGGCAGnearMIRNAShortStack
mpo-b3.0r1-9732Marchantia polymorpha (Common Liverwort) 3.0scaffold_43:1244753-1244818-702.13GCAGAAGGUCGAGAACGAGACnearMIRNAShortStack
mpo-b3.0r1-9823Marchantia polymorpha (Common Liverwort) 3.0scaffold_44:533087-533273+86,0332,621.63UGCACUGACAAGAACGCAGGAnearMIRNAShortStack
mpo-b3.0r1-9938Marchantia polymorpha (Common Liverwort) 3.0scaffold_45:243753-243839-260.79UAGCUCUGCGGUAGACAACAAnearMIRNAShortStack
mpo-b3.0r1-9992Marchantia polymorpha (Common Liverwort) 3.0scaffold_45:840452-840539+1233.75UGAAUUCUCCGUAUGCUGGCUnearMIRNAShortStack
mpo-b3.0r1-10106Marchantia polymorpha (Common Liverwort) 3.0scaffold_46:586045-586117+1444.39UCUGAGGAUAGGAGGCAUUCUnearMIRNAShortStack
mpo-b3.0r1-10294Marchantia polymorpha (Common Liverwort) 3.0scaffold_47:1402052-1402240-1,11634.01UACAGCAAUGAGUGUCGCUGAnearMIRNAShortStack
mpo-b3.0r1-11032Marchantia polymorpha (Common Liverwort) 3.0scaffold_53:468970-468992+561.71GGAGUAGGGGAUAACGGACUnearMIRNAShortStack
mpo-b3.0r1-11033Marchantia polymorpha (Common Liverwort) 3.0scaffold_53:469970-469993+581.77GGAGUAGGGGAUAACGGACUnearMIRNAShortStack
mpo-b3.0r1-11156Marchantia polymorpha (Common Liverwort) 3.0scaffold_54:652458-652493+270.82UCUUUGUAUACUUUUAGGGCUnearMIRNAShortStack
mpo-b3.0r1-11365Marchantia polymorpha (Common Liverwort) 3.0scaffold_55:1211252-1211388+672.04AAUUUGUGUGGCAGUAACUGCnearMIRNAShortStack
mpo-b3.0r1-11910Marchantia polymorpha (Common Liverwort) 3.0scaffold_59:748975-749111+25,095764.71GGGGAUGUAGCUCAGAUGGUAnearMIRNAShortStack
mpo-b3.0r1-12050Marchantia polymorpha (Common Liverwort) 3.0scaffold_61:58803-58845-471.43ACCGGGAGUAGAAAGUAAGGCGnearMIRNAShortStack
mpo-b3.0r1-12354Marchantia polymorpha (Common Liverwort) 3.0scaffold_63:162018-162114+1976.00UCACAAGCACAGUAGACACUUnearMIRNAShortStack
mpo-b3.0r1-12355Marchantia polymorpha (Common Liverwort) 3.0scaffold_63:163950-164095-1775.39UACCAAGUGAGUAGAAUGCUAnearMIRNAShortStack
mpo-b3.0r1-12483Marchantia polymorpha (Common Liverwort) 3.0scaffold_64:336164-336247-260.79UGGGAAAACAAGGCAAAACAAnearMIRNAShortStack
mpo-b3.0r1-12547Marchantia polymorpha (Common Liverwort) 3.0scaffold_64:902515-902626+371.13UUGUGCUGAAAGUCCGGACAnearMIRNAShortStack
mpo-b3.0r1-12697Marchantia polymorpha (Common Liverwort) 3.0scaffold_65:933600-933722+391.19CAAAACCUCAGCAAAGGCGUCnearMIRNAShortStack
mpo-b3.0r1-2852Marchantia polymorpha (Common Liverwort) 3.0scaffold_7:1931373-1931473-1,89057.59UGGACCAUAGUGGGCAUGUACnearMIRNAShortStack
mpo-b3.0r1-2994Marchantia polymorpha (Common Liverwort) 3.0scaffold_7:2804481-2804545+1735.27AUUGUAGAGUAAGUCCAUACCAAGnearMIRNAShortStack
mpo-b3.0r1-13262Marchantia polymorpha (Common Liverwort) 3.0scaffold_70:919527-919609-1675.09UCAACGGAAGAAAUCCUCCAAnearMIRNAShortStack
mpo-b3.0r1-13810Marchantia polymorpha (Common Liverwort) 3.0scaffold_76:748-773+170.52UACUCUGGCGGCAGAAUUAGACCAnearMIRNAShortStack
mpo-b3.0r1-3083Marchantia polymorpha (Common Liverwort) 3.0scaffold_8:498766-498853-260.79UUCUGACAUUGGGACCGAAAAnearMIRNAShortStack
mpo-b3.0r1-3247Marchantia polymorpha (Common Liverwort) 3.0scaffold_8:2248024-2248050-1374.18UCCCAAAGAAAUCGUGGACUCnearMIRNAShortStack
mpo-b3.0r1-14168Marchantia polymorpha (Common Liverwort) 3.0scaffold_80:90781-90913+682.07CAUCAGAGCAGUUCUAGGAGCnearMIRNAShortStack
mpo-b3.0r1-14311Marchantia polymorpha (Common Liverwort) 3.0scaffold_81:265515-265676-290.88AACACAGAAACAACAUCGGCGCUGnearMIRNAShortStack
mpo-b3.0r1-14454Marchantia polymorpha (Common Liverwort) 3.0scaffold_82:424636-424667-401.22AGCAGCAGCGACGAUCGACCGGCnearMIRNAShortStack
mpo-b3.0r1-14582Marchantia polymorpha (Common Liverwort) 3.0scaffold_83:319135-319198+732.22UGAAAUACAAGGUGACCCAACnearMIRNAShortStack
mpo-b3.0r1-14604Marchantia polymorpha (Common Liverwort) 3.0scaffold_83:412831-412856-200.61CAAAAACUGGUUUGGCCCUAGnearMIRNAShortStack
mpo-b3.0r1-14944Marchantia polymorpha (Common Liverwort) 3.0scaffold_86:632481-632596+1133.44UCGAGAAAGUUCUGGCAGAUAnearMIRNAShortStack
mpo-b3.0r1-3413Marchantia polymorpha (Common Liverwort) 3.0scaffold_9:992378-992429+401.22UAGCUGGUGGUAGGAUUCACAnearMIRNAShortStack
mpo-b3.0r1-3434Marchantia polymorpha (Common Liverwort) 3.0scaffold_9:1150875-1150981-200.61UUUGUUGGAUGAGUUGUUUGCnearMIRNAShortStack
mpo-b3.0r1-15229Marchantia polymorpha (Common Liverwort) 3.0scaffold_90:163885-163990+220.67AUUUAGAUGUGUGUUUCAGGCnearMIRNAShortStack
mpo-b3.0r1-15386Marchantia polymorpha (Common Liverwort) 3.0scaffold_91:527635-527742-692.10UUGAACUGGCUUCCACCACAUnearMIRNAShortStack
mpo-b3.0r1-15618Marchantia polymorpha (Common Liverwort) 3.0scaffold_93:802964-803034-1103.35UUUGGACAAAGACGUCUGCGUnearMIRNAShortStack
mpo-b3.0r1-15781Marchantia polymorpha (Common Liverwort) 3.0scaffold_95:833384-833465+2788.47UAUCUCGACGCCUUGGCUAACnearMIRNAShortStack