Data from Lunardon et al. (2020)

Annotations viewer

Genome

Cuscuta campestris (Field Dodder) genome build 0.32 (ccm-b0.32)

Version 0.32 assembly of the Cuscuta campestris genome from Vogel et al. 2018

Locus type

Annotation source

Name contains:

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Warning: Search returned more than 1,000 results. Only the first 1,000 are shown below. Use the buttons above to download the full results, or refine your search criteria.

Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
ccm-b0.32r1-8498	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:35168-35660	-	81	0.99	AAAUGACUUUCGGCAA		OtherRNA	ShortStack
ccm-b0.32r1-8507	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:80536-80661	+	46	0.56	CCAGUUGUGGAAGACGUGAAUGA		OtherRNA	ShortStack
ccm-b0.32r1-8514	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:97744-97989	.	42	0.51	AUACACAUGAUCUAGCGUUAGAUG		OtherRNA	ShortStack
ccm-b0.32r1-8534	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:165313-165744	.	65	0.79	AGUUGCCGCGACUACUGAAAAAGU		OtherRNA	ShortStack
ccm-b0.32r1-8545	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:181951-182019	-	58,681	713.83	AGGAUACUCGGCUCUCACCCGAGAGACCC		OtherRNA	ShortStack
ccm-b0.32r1-8552	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:250088-250220	-	46	0.56	GCGUCUAUAGUCCAACA		OtherRNA	ShortStack
ccm-b0.32r1-8565	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:277972-278148	+	1,720	20.92	GUUGAGAUGGCCGAGUUGG		OtherRNA	ShortStack
ccm-b0.32r1-8590	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:343462-343499	-	60	0.73	AGUAAGACAAGUAGCCUGAGUGGAAAUUGUGACUUUUU		OtherRNA	ShortStack
ccm-b0.32r1-8607	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:395778-395959	.	47	0.57	AACCAAAAUUUCAAGAUCAGGAUC		OtherRNA	ShortStack
ccm-b0.32r1-8618	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:419696-420126	+	52	0.63	CAUGUGGUGCUCUCUAUUUCCUUGCACAGGGGU		OtherRNA	ShortStack
ccm-b0.32r1-8637	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:472186-472757	-	44	0.54	AUCACCGGGAUAUCCAUCCACGCC		OtherRNA	ShortStack
ccm-b0.32r1-8640	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:481354-482232	-	78	0.95	AAGCGGGACGGUGAAGACGAUCGGGGAAGCC		OtherRNA	ShortStack
ccm-b0.32r1-8643	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:495692-495973	.	84	1.02	ACGGAAGUAGUAUUAAAAAACCAC		OtherRNA	ShortStack
ccm-b0.32r1-8666	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:575246-575765	.	47	0.57	AGCAGGUGCAUGAGCAAAGGGU		OtherRNA	ShortStack
ccm-b0.32r1-8685	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:643572-643862	.	255	3.10	CCCAUUCUUGACACCA		OtherRNA	ShortStack
ccm-b0.32r1-8687	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:647730-648139	-	44	0.54	UGAAAGGUUUUGAACUUUAGGUACC		OtherRNA	ShortStack
ccm-b0.32r1-8690	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:654701-655421	.	563	6.85	AGCAACAAGAACGGACGUCAGAGC		OtherRNA	ShortStack
ccm-b0.32r1-8701	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:708629-708646	-	138	1.68	AUCUGUGAUGAUCUCA		OtherRNA	ShortStack
ccm-b0.32r1-8715	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:752982-753069	-	82	1.00	GUUUCACUUUGAUUUCGGGGAGAAUAG		OtherRNA	ShortStack
ccm-b0.32r1-8725	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:785172-785726	.	51	0.62	AUGGAACUGGAAGAAACUGGAAGA		OtherRNA	ShortStack
ccm-b0.32r1-8731	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:799701-800495	.	45	0.55	UUGAAGGUUGAAGAGGA		OtherRNA	ShortStack
ccm-b0.32r1-8782	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:998615-1000299	+	90	1.10	UUCCGUGAACAAUAUU		OtherRNA	ShortStack
ccm-b0.32r1-8806	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1097878-1098216	.	54	0.66	AUAGAGACGUGUAAGUUGCGAUU		OtherRNA	ShortStack
ccm-b0.32r1-8807	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1099130-1099680	+	53	0.65	UUCGGAAACCGUUGGCACUUCUCAUGGCA		OtherRNA	ShortStack
ccm-b0.32r1-8829	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1170498-1170674	-	44	0.54	CGCGGUACUGUGAUGG		OtherRNA	ShortStack
ccm-b0.32r1-8830	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1172462-1173184	.	110	1.34	AACACGGACCAAGGGGC		OtherRNA	ShortStack
ccm-b0.32r1-8855	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1290914-1291279	.	79	0.96	AUGUUGGCUUGGAGUACAAAUGGA		OtherRNA	ShortStack
ccm-b0.32r1-8869	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1330606-1330890	.	47	0.57	AAACAAUGUCGAGUCAUAGUGGAU		OtherRNA	ShortStack
ccm-b0.32r1-8880	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1387679-1388045	.	46	0.56	AAGGAACUGGAAGAAACUAAAAGU		OtherRNA	ShortStack
ccm-b0.32r1-8889	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1421226-1421947	.	51	0.62	AUAACCUGUAACAGAAUGACGUGU		OtherRNA	ShortStack
ccm-b0.32r1-8894	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1447439-1448072	-	83	1.01	AUUGUCCGGAUCUAAGAAAAAGAC		OtherRNA	ShortStack
ccm-b0.32r1-8909	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1500254-1500804	+	1,461	17.77	AGUUUCGGGGCGAACGGUUGAACG		OtherRNA	ShortStack
ccm-b0.32r1-8911	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1503001-1503956	+	45	0.55	GAAACCUUCAAACAACAGCU		OtherRNA	ShortStack
ccm-b0.32r1-8912	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1507783-1508135	.	49	0.60	AUUUACCCCUGAACAUUAAAAAGU		OtherRNA	ShortStack
ccm-b0.32r1-8929	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1551568-1551586	-	456	5.55	GGAGAGAUGGCUGAGC	miR3473	OtherRNA	ShortStack
ccm-b0.32r1-8938	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1584063-1585164	.	146	1.78	AUUCUGGCUGGAUGGACUGGGGCU		OtherRNA	ShortStack
ccm-b0.32r1-8959	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1641279-1641608	.	49	0.60	AUUUCAAGUGACUGUCGACUGACU		OtherRNA	ShortStack
ccm-b0.32r1-8961	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1653209-1654025	+	42	0.51	GCAAUGGGUCGGUGGGCUGUAUCU		OtherRNA	ShortStack
ccm-b0.32r1-8962	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1656616-1656729	+	46	0.56	AUGGGCUGUAAUCAGCUGUGUGACGGU		OtherRNA	ShortStack
ccm-b0.32r1-8975	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1681648-1681834	-	97	1.18	AAGAAAUGCAUCGAGGUAAAGAACC		OtherRNA	ShortStack
ccm-b0.32r1-8983	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1708831-1709022	.	192	2.34	ACGGUCACUGAGAGAAUGUAAAUU		OtherRNA	ShortStack
ccm-b0.32r1-8993	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1729188-1729487	.	66	0.80	AAUAUUCUUCCCGUUUGACUGUGC		OtherRNA	ShortStack
ccm-b0.32r1-9001	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1752165-1752490	.	92	1.12	AUUGGACGAACAAAAAGGAAAGUG		OtherRNA	ShortStack
ccm-b0.32r1-9005	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1765553-1765672	+	588	7.15	AUGGAACAAUGUAGGU	miR6682	OtherRNA	ShortStack
ccm-b0.32r1-9016	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1809810-1810064	-	45	0.55	CGGUGAAAUUGCGUAA		OtherRNA	ShortStack
ccm-b0.32r1-9018	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1813069-1813396	-	295	3.59	UCAGGCGAUUGUGGGU		OtherRNA	ShortStack
ccm-b0.32r1-9021	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1830701-1830880	+	57	0.69	AUCAGAGUGGCGCAGCGGAAGCGUGGUGGGCCC		OtherRNA	ShortStack
ccm-b0.32r1-9024	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1837556-1837934	-	55	0.67	AAACAUGAAAGACUUUUUAGGACA		OtherRNA	ShortStack
ccm-b0.32r1-9056	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1977691-1978201	.	48	0.58	AUUUCAUAUAAUGAGCAUGGACGU		OtherRNA	ShortStack
ccm-b0.32r1-9060	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:1986970-1987228	.	82	1.00	GAGUUAGUGGAACGCU		OtherRNA	ShortStack
ccm-b0.32r1-9065	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2004911-2005036	.	45	0.55	AUUGCAACGUCUAAAAAUCACGGA		OtherRNA	ShortStack
ccm-b0.32r1-9078	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2030360-2030756	+	63	0.77	AUUGGAUUUACUUAAGAACAGACA		OtherRNA	ShortStack
ccm-b0.32r1-9083	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2036419-2036726	.	53	0.65	AUCAAAUAAGUCUCACUUUCCUGU		OtherRNA	ShortStack
ccm-b0.32r1-9086	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2051420-2051717	+	2,959	36.00	GGCAACGUUAGGGAUUCCGGAGAUGUCGGC		OtherRNA	ShortStack
ccm-b0.32r1-9095	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2069129-2069496	.	93	1.13	ACACACCCCGAUCUGAACACACCC		OtherRNA	ShortStack
ccm-b0.32r1-9113	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2122829-2123987	.	362	4.40	GGGGAUGUAGAUCAGA		OtherRNA	ShortStack
ccm-b0.32r1-9116	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2169863-2170308	.	49	0.60	AAGAAAGAGAUGAACGAAAAAACC		OtherRNA	ShortStack
ccm-b0.32r1-9125	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2191529-2192245	.	161	1.96	AUAUGACUUUGAGAGAUGUUCGCC		OtherRNA	ShortStack
ccm-b0.32r1-9155	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2329398-2330502	+	224	2.73	UGUACGGGGUCAAUGGGCGAUC		OtherRNA	ShortStack
ccm-b0.32r1-9159	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2333856-2334101	.	115	1.40	GUUACGGAGUGUAAGGAUGGACUC		OtherRNA	ShortStack
ccm-b0.32r1-9162	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2337727-2337968	.	104	1.27	CGUUCGCGCGGCCCCUA		OtherRNA	ShortStack
ccm-b0.32r1-9164	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2346233-2346516	-	538	6.55	AUUAGCAUGGCCCCUGCGCAAGGAUG		OtherRNA	ShortStack
ccm-b0.32r1-9188	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2408619-2408716	+	73	0.89	UCCGCUAUAGCACAUU		OtherRNA	ShortStack
ccm-b0.32r1-9205	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2450349-2451061	.	78	0.95	AUCGAGAGCUCCAAGC		OtherRNA	ShortStack
ccm-b0.32r1-9226	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2499877-2500116	.	64	0.78	CCCAACCGAUGUCGUACAAAAUAU		OtherRNA	ShortStack
ccm-b0.32r1-9230	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2506394-2507792	+	196	2.38	GUGGACUUGUAGUGUAGUUAUAAUAUACU		OtherRNA	ShortStack
ccm-b0.32r1-9235	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2523636-2524192	+	213	2.59	UGGACGGGGUCAAUGGGCGAUCA		OtherRNA	ShortStack
ccm-b0.32r1-9239	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2531988-2532109	.	52	0.63	UUGGUCCGACCUGAAUGUUUGUC		OtherRNA	ShortStack
ccm-b0.32r1-9246	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2555097-2555447	+	88	1.07	AAAAAGACCAUGUAGUUGUGAUA		OtherRNA	ShortStack
ccm-b0.32r1-9267	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2589742-2590133	.	59	0.72	AAAAGUAGGGCCCGAGGAGUGUGA		OtherRNA	ShortStack
ccm-b0.32r1-9270	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2604185-2604876	.	50	0.61	CAUUUAUCUGGACAGGCCUGGCCC		OtherRNA	ShortStack
ccm-b0.32r1-9300	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2713185-2713436	+	386	4.70	AUGCUUAGUGUGUGACUCGUUAAC		OtherRNA	ShortStack
ccm-b0.32r1-9318	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2742899-2743216	-	59	0.72	AUCUAUUUGGUGGUGCAGACAAUAAGAGCUGAA		OtherRNA	ShortStack
ccm-b0.32r1-9319	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2743690-2744074	-	88	1.07	UGAAGCGUGGACAUAGUGCU		OtherRNA	ShortStack
ccm-b0.32r1-9324	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2757075-2758262	.	144	1.75	AACCCCUAAUGUUGAUGUCAAAUG		OtherRNA	ShortStack
ccm-b0.32r1-9333	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2775867-2776171	.	42	0.51	GAGCUCUUUUGUGAAGUGUUGAACUCAAGAACAUUUUU		OtherRNA	ShortStack
ccm-b0.32r1-9334	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2776962-2777434	+	58	0.71	AACUUCAGUCAAACAUCGUAACGU		OtherRNA	ShortStack
ccm-b0.32r1-9357	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2844292-2844652	.	70	0.85	AAAGGUUGGUCUGGAUU		OtherRNA	ShortStack
ccm-b0.32r1-9383	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2928604-2928737	-	24,508	298.13	UCCGUUGUAGUCUAGC		OtherRNA	ShortStack
ccm-b0.32r1-9384	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:2929333-2930294	-	48,762	593.17	UCCGUUGUAGUCUAGU		OtherRNA	ShortStack
ccm-b0.32r1-9430	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3077619-3077708	+	2,560	31.14	UCCGUUGUAGUCUAGG		OtherRNA	ShortStack
ccm-b0.32r1-9433	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3091007-3091849	-	52	0.63	UUGGCGAAUUGUAUUUGAGAUGU		OtherRNA	ShortStack
ccm-b0.32r1-9434	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3091990-3092200	.	55	0.67	AAAUGACUAUUUUGAACUCUUAUU		OtherRNA	ShortStack
ccm-b0.32r1-9442	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3130091-3130437	+	42	0.51	CCUGAGCUGUGGGUCGUGU		OtherRNA	ShortStack
ccm-b0.32r1-9457	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3169652-3169928	-	788	9.59	GCGGGGAUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.32r1-9458	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3174811-3174905	+	99	1.20	GCUGGAGUAGCUCAGU	miR4900	OtherRNA	ShortStack
ccm-b0.32r1-9461	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3180669-3180912	-	47	0.57	UCGAUUCAGCUGUGGG		OtherRNA	ShortStack
ccm-b0.32r1-9464	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3187882-3188693	.	154	1.87	AUGGUCUGCACGGUAAUCAGUUGU		OtherRNA	ShortStack
ccm-b0.32r1-9478	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3221342-3221645	.	174	2.12	CCAACGUCCCAUUACCUUGAUGCC		OtherRNA	ShortStack
ccm-b0.32r1-9500	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3274516-3274769	.	139	1.69	AAGCACCGUAGGACUCCCAUAUGG		OtherRNA	ShortStack
ccm-b0.32r1-9522	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3337749-3338905	+	66	0.80	CACGAACUCGGGCUUUGUUUG		OtherRNA	ShortStack
ccm-b0.32r1-9525	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3351286-3351792	.	49	0.60	CAAAGUUUUGACGCAAUUUGGAGCU		OtherRNA	ShortStack
ccm-b0.32r1-9533	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3381844-3382205	+	19,893	241.99	CACUGUGACUGAGAAAACAAGUUUCUAUCCUUCUGAUC		OtherRNA	ShortStack
ccm-b0.32r1-9534	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3382332-3382462	+	4,030	49.02	UGCUGUGAUGAAUUAUGAAAAUU		OtherRNA	ShortStack
ccm-b0.32r1-9541	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3402658-3402718	+	288	3.50	GGGGAAGUAGCUCAGA		OtherRNA	ShortStack
ccm-b0.32r1-9543	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3404742-3405343	-	79	0.96	AGUGCCAAGUUCGGUCUUGCUCUGGCCCUCAAGCCU		OtherRNA	ShortStack
ccm-b0.32r1-9550	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3425565-3426446	.	152	1.85	CUUGAUCUUCUGUGAA	miR6421	OtherRNA	ShortStack
ccm-b0.32r1-9551	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3431158-3431591	+	63	0.77	GGUGCGCGAGAUUGUGGAGCAAAGCUGGACCGCA		OtherRNA	ShortStack
ccm-b0.32r1-9579	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3515920-3516318	-	62	0.75	AACAGUGCAGAUUACUUUGAAAAC		OtherRNA	ShortStack
ccm-b0.32r1-9595	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3558186-3558337	-	593	7.21	UUUCUGGUCUUUGAAGCUGGUCUAGUAGGCAUCAGUACAUUA		OtherRNA	ShortStack
ccm-b0.32r1-9596	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3558435-3558597	-	4,711	57.31	GAGGAUGACGAUGCUUAUUAUUUUUCUGACAC		OtherRNA	ShortStack
ccm-b0.32r1-9597	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3562158-3562916	-	53	0.65	AAAUUUACUUGUACUCGUUUGCUGC		OtherRNA	ShortStack
ccm-b0.32r1-9603	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3570586-3571025	+	60	0.73	AAUCAGUACACAUAAUUGUGACAACU		OtherRNA	ShortStack
ccm-b0.32r1-9604	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3573411-3573476	+	45	0.55	AUGCCACCCGAGGCUGUAGAUCUUGUUU		OtherRNA	ShortStack
ccm-b0.32r1-9623	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3625476-3625831	+	717	8.72	CAUGGCACUCAUCGACGCGACUGUC		OtherRNA	ShortStack
ccm-b0.32r1-9624	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3626350-3626837	+	33,568	408.34	UCGGAUAACCGUAGUAAAUCUAGAGCUAAUACG		OtherRNA	ShortStack
ccm-b0.32r1-9632	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3666098-3666386	.	65	0.79	AGGACCAUUACCAGUGCUCUAAGG		OtherRNA	ShortStack
ccm-b0.32r1-9638	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3685267-3685754	-	87	1.06	CGUGGAACGUCGUCUC		OtherRNA	ShortStack
ccm-b0.32r1-9666	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3774344-3774872	.	95	1.16	UCGAGGUUUGGACAAAG		OtherRNA	ShortStack
ccm-b0.32r1-9682	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3807440-3807755	.	91	1.11	UUUGUUGUAAGAACCGCCAGGUACC		OtherRNA	ShortStack
ccm-b0.32r1-9701	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3834791-3835503	+	106	1.29	CCCGCUGUAGCACAUC		OtherRNA	ShortStack
ccm-b0.32r1-9708	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3866325-3866869	.	79	0.96	ACUCGGGGCGUGGACA		OtherRNA	ShortStack
ccm-b0.32r1-9710	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3868188-3868660	-	52	0.63	CAGGACACCGGGAUCACC		OtherRNA	ShortStack
ccm-b0.32r1-9711	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3868835-3869344	-	48	0.58	CGUCCGGCAAUUCGCGGAGAACUUCC		OtherRNA	ShortStack
ccm-b0.32r1-9713	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3878703-3879365	-	43	0.52	AAUACACUUCACCCAUAUUUCAUU		OtherRNA	ShortStack
ccm-b0.32r1-9729	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3911184-3911644	.	54	0.66	CUUGGCAGUGAACAUGUAGACAUU		OtherRNA	ShortStack
ccm-b0.32r1-9735	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3930702-3930897	.	71	0.86	AGGACUUUGAGAUAUGGUAAUGUU		OtherRNA	ShortStack
ccm-b0.32r1-9740	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3955352-3955680	.	52	0.63	AUUUACAGUGUCAAUCAUGAACUC		OtherRNA	ShortStack
ccm-b0.32r1-9745	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3971359-3971634	.	77	0.94	UGAACUGAAUGACUUGGUUGUUU		OtherRNA	ShortStack
ccm-b0.32r1-9753	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:3980805-3981033	.	424	5.16	GUCAACCUGGCUCUGAUACCAUGU		OtherRNA	ShortStack
ccm-b0.32r1-9770	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4034520-4034983	-	348	4.23	AUAUAAGGUCUGUUUAGAAAUAGC		OtherRNA	ShortStack
ccm-b0.32r1-9771	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4035930-4036391	+	81	0.99	CUGAAGUGACUGAUGACUGCCUU		OtherRNA	ShortStack
ccm-b0.32r1-9773	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4048227-4048330	-	215	2.62	AUCAGAGUGGCGCAGCGGAAGCGUGGUGGGCCC		OtherRNA	ShortStack
ccm-b0.32r1-9775	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4051930-4052084	.	48	0.58	AGGACUCUUGAACUACAAGUUGAG		OtherRNA	ShortStack
ccm-b0.32r1-9785	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4091299-4093084	-	607	7.38	ACUGACUGGCAAGACG		OtherRNA	ShortStack
ccm-b0.32r1-9792	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4127139-4127352	.	45	0.55	GAGAUUUGUUCUUCAUCUUGAACCC		OtherRNA	ShortStack
ccm-b0.32r1-9798	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4146831-4147249	-	51	0.62	UUUUAGGAUUGGCUGUG		OtherRNA	ShortStack
ccm-b0.32r1-9799	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4149169-4149525	-	53	0.65	CGCGGGCUCUGACGACGGC		OtherRNA	ShortStack
ccm-b0.32r1-9805	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4163952-4164795	-	61	0.74	AAGGAGCGGCUCUGCC	miR346	OtherRNA	ShortStack
ccm-b0.32r1-9816	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4184211-4184980	+	213	2.59	AGAAACUGGCCAUCGCUCGGGCGG		OtherRNA	ShortStack
ccm-b0.32r1-9846	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4258768-4259456	.	74	0.90	AAUGGUCUGGAUUUUUUGGUGUUC		OtherRNA	ShortStack
ccm-b0.32r1-9855	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4288544-4289303	.	263	3.20	GGGGAUGUAGCUCAUU		OtherRNA	ShortStack
ccm-b0.32r1-9859	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4300451-4300990	.	43	0.52	AUUCAUCUUAGGAUCUAACUUUGA		OtherRNA	ShortStack
ccm-b0.32r1-9870	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4340477-4340959	.	47	0.57	AUACCCUUUUUCGUUGGAUAGACG		OtherRNA	ShortStack
ccm-b0.32r1-9889	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4426559-4426804	+	167	2.03	CCCGGCAACGGAACCA		OtherRNA	ShortStack
ccm-b0.32r1-9893	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4446383-4446905	+	69	0.84	ACCAGAUCUAUCUAGUCUAGAACC		OtherRNA	ShortStack
ccm-b0.32r1-9897	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4448614-4449438	.	160	1.95	AACUUCGAGUUCGGUCAUCAAAAC		OtherRNA	ShortStack
ccm-b0.32r1-9924	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4533843-4534294	.	60	0.73	AUGAUGGAUAUUUACUUGAGCUAGU		OtherRNA	ShortStack
ccm-b0.32r1-9940	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4570100-4570207	.	94	1.14	GAAAAGGCUACCGACGGACAACGU		OtherRNA	ShortStack
ccm-b0.32r1-9963	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4622144-4622236	+	59	0.72	GCGGGGAUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.32r1-9974	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4639734-4639864	+	719	8.75	CCGGCUGUUUCUGUUAGU		OtherRNA	ShortStack
ccm-b0.32r1-9976	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4644661-4647044	-	1,111	13.52	AGAAGUUUGAGGGACUAUGCA		OtherRNA	ShortStack
ccm-b0.32r1-9977	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4647466-4647674	-	126	1.53	AUAUCGUCGGCAAUGGCGGACACCGAGACGU		OtherRNA	ShortStack
ccm-b0.32r1-9978	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4648601-4648890	-	52	0.63	ACGGGAAGGAACUGAAAGAACUGU		OtherRNA	ShortStack
ccm-b0.32r1-9986	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4677107-4677387	-	54	0.66	ACCAUGUAAAUCUUUGUUGAGACG		OtherRNA	ShortStack
ccm-b0.32r1-9994	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4714837-4715124	.	49	0.60	CCGGGUGUGGAUCAGU		OtherRNA	ShortStack
ccm-b0.32r1-10011	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4751324-4752133	+	79	0.96	GGGGUGGCUGUGGACUUGUCAC		OtherRNA	ShortStack
ccm-b0.32r1-10018	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4769265-4769853	-	63	0.77	ACUAAUCGAAUACACUAGGACCAG		OtherRNA	ShortStack
ccm-b0.32r1-10046	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4866778-4867306	.	52	0.63	AGGGACAGAACUCACAGAAGGAGU		OtherRNA	ShortStack
ccm-b0.32r1-10052	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4890422-4890973	.	45	0.55	AAGAAUACUCUGACAAAUUUCUGA		OtherRNA	ShortStack
ccm-b0.32r1-10069	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:4967234-4967789	.	51	0.62	CGUUUUCAAAGUAAUCUGCACCC		OtherRNA	ShortStack
ccm-b0.32r1-10084	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5006858-5007057	-	46	0.56	AAGUAUUGUAGGCUUUGUUGUGGC		OtherRNA	ShortStack
ccm-b0.32r1-10086	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5012995-5014317	+	494	6.01	AGGGCACAGAACUUCCUCC		OtherRNA	ShortStack
ccm-b0.32r1-10087	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5015293-5016334	+	316	3.84	AUUAUCGUCUGUGUGAAGUAUGGG		OtherRNA	ShortStack
ccm-b0.32r1-10098	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5042925-5043410	.	91	1.11	ACGCUAAAAGCCACCGUCUGAUAG		OtherRNA	ShortStack
ccm-b0.32r1-10107	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5059171-5059493	.	49	0.60	GAGAAUGUAGAAGAUCAUACAAGA		OtherRNA	ShortStack
ccm-b0.32r1-10111	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5086383-5086647	.	76	0.93	CUUCCAGUGACUAGAACCCAU		OtherRNA	ShortStack
ccm-b0.32r1-10117	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5095100-5095281	.	94	1.14	AUGAAGUUUCGACCAUCUGAAUAGU		OtherRNA	ShortStack
ccm-b0.32r1-10126	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5118874-5119059	.	110	1.34	AUGGCGGCCAUUUAGUUUGAACAA		OtherRNA	ShortStack
ccm-b0.32r1-10131	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5143590-5143938	.	47	0.57	AUUUGGGCAGAUGUGGAAGUUACU		OtherRNA	ShortStack
ccm-b0.32r1-10136	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5153635-5154256	.	110	1.34	CGUGAAGUUGGAAUAGUGCUCUGGGU		OtherRNA	ShortStack
ccm-b0.32r1-10139	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5161388-5161680	+	48	0.58	CGUGUGUGAAGAAGGC		OtherRNA	ShortStack
ccm-b0.32r1-10142	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5168371-5168482	+	231	2.81	UCUGAAUCCUUUGAUGCAUAAACACUUCACGCCCUGAGGCAC		OtherRNA	ShortStack
ccm-b0.32r1-10160	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5264413-5265083	+	45	0.55	AGUACCAAUAUGUCAACUCU		OtherRNA	ShortStack
ccm-b0.32r1-10163	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5268142-5268328	-	53	0.65	AUCUCAGACUGAAAAAUUUCAUC		OtherRNA	ShortStack
ccm-b0.32r1-10165	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1:5273880-5274247	.	89	1.08	GCUCCGUAUAUAGCGUUGGACGGU		OtherRNA	ShortStack
ccm-b0.32r1-20188	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:31153-31586	-	44	0.54	AUUUGCGGGGAGGUUCGGAUC		OtherRNA	ShortStack
ccm-b0.32r1-20198	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:52902-53132	.	105	1.28	AUUUUGUACACUGUAGAGAUGCACC		OtherRNA	ShortStack
ccm-b0.32r1-20223	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:137168-137550	+	95	1.16	AUACGGAUUUAACGAGGAGAUAAC		OtherRNA	ShortStack
ccm-b0.32r1-20226	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:147710-148946	.	340	4.14	GGUGAGGGACGACGAUC		OtherRNA	ShortStack
ccm-b0.32r1-20247	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:226039-226265	.	57	0.69	AGUCAGAUCUUCUUGAUGUAGGGA		OtherRNA	ShortStack
ccm-b0.32r1-20250	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:232786-232992	-	45	0.55	UUUCCUUGAUUCGUUUCAG		OtherRNA	ShortStack
ccm-b0.32r1-20264	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:268193-268980	.	103	1.25	ACCCACAUGGUGGAUAUCGUCCCU		OtherRNA	ShortStack
ccm-b0.32r1-20269	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:285032-285165	.	47	0.57	ACAAUAUAUGAGAUCGACUUCAGU		OtherRNA	ShortStack
ccm-b0.32r1-20310	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:426145-426566	.	47	0.57	UGAACUGAUCUCGAUAUUUUCUGU		OtherRNA	ShortStack
ccm-b0.32r1-20322	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:451414-451987	.	45	0.55	AAUAAAAAUUCCCCGUUGGCAAUG		OtherRNA	ShortStack
ccm-b0.32r1-20350	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:543445-543546	-	98	1.19	UCGGUCAAUGAUCAGCAGAU		OtherRNA	ShortStack
ccm-b0.32r1-20371	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:610740-610891	.	60	0.73	CAACCAACUCGGAACC		OtherRNA	ShortStack
ccm-b0.32r1-20385	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:657406-657474	-	477	5.80	GCGUCUGUAGUCCAACU		OtherRNA	ShortStack
ccm-b0.32r1-20398	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:692693-692896	+	99	1.20	UUUUCCAAUGUAGCACUUAAAUACU		OtherRNA	ShortStack
ccm-b0.32r1-20411	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:757353-757524	.	108	1.31	AUUGAAUUGGCUGGUUUGACGACC		OtherRNA	ShortStack
ccm-b0.32r1-20416	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:763981-764201	.	58	0.71	AAAGACUAUCGACGGACAGCGUUU		OtherRNA	ShortStack
ccm-b0.32r1-20434	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:817090-817490	.	109	1.33	UCUGGCCGGUUGUAUUGUGUGUGC		OtherRNA	ShortStack
ccm-b0.32r1-20437	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:824664-825428	+	49	0.60	GCCUAUGCCUGGACAAAACUAUGG		OtherRNA	ShortStack
ccm-b0.32r1-20443	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:846684-847344	+	51	0.62	AAUAGUUGGACAAGAUGAGAUG		OtherRNA	ShortStack
ccm-b0.32r1-20449	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:888407-888474	-	55	0.67	UUGAUGUCGGCUCUUU		OtherRNA	ShortStack
ccm-b0.32r1-20458	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:911158-911292	-	10,249	124.67	UCCGUUGUAGUCUAGA		OtherRNA	ShortStack
ccm-b0.32r1-20461	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:915309-915640	-	9,239	112.39	UCCGUUGUAGUCUAGG		OtherRNA	ShortStack
ccm-b0.32r1-20477	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:988617-988939	-	114	1.39	UUUGUCGCUAAGAUUCCC		OtherRNA	ShortStack
ccm-b0.32r1-20511	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1088754-1089272	+	987	12.01	CGUAAGGAGAACGUGUGGA		OtherRNA	ShortStack
ccm-b0.32r1-20512	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1089593-1089966	+	280	3.41	AUCCGAUUGUGUGUUUAAUUACU		OtherRNA	ShortStack
ccm-b0.32r1-20539	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1158190-1159172	-	62	0.75	UUGGACUCGGAAUCUGGGCAACGCAUCCCGU		OtherRNA	ShortStack
ccm-b0.32r1-20543	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1164568-1164976	.	54	0.66	AACGGUACAGAUUACUUUGAAAAC		OtherRNA	ShortStack
ccm-b0.32r1-20573	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1241898-1242237	.	231	2.81	GUUGAGAUGGCCGAGUUGG		OtherRNA	ShortStack
ccm-b0.32r1-20576	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1244229-1244827	-	86	1.05	AUUUGAGUAAUGACUAAAAGUGCU		OtherRNA	ShortStack
ccm-b0.32r1-20577	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1245529-1245768	-	42	0.51	UGGUGAUGGAGGACAUAUUCUGCAUCUUC		OtherRNA	ShortStack
ccm-b0.32r1-20578	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1245922-1246743	-	107	1.30	AUCCUAACAAACUCAAUGAAGCGU		OtherRNA	ShortStack
ccm-b0.32r1-20619	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1402123-1402664	+	42	0.51	UGGAAGGUGGAGAUGCUGGAAACAGGGAGGAUU		OtherRNA	ShortStack
ccm-b0.32r1-20625	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1427746-1428349	-	94	1.14	UCGCGGGAAGAAGCUGACGUG		OtherRNA	ShortStack
ccm-b0.32r1-20626	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1428749-1429365	.	112	1.36	AGAAAAAACGAAAGAGGAACUUUU		OtherRNA	ShortStack
ccm-b0.32r1-20634	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1453012-1453309	.	69	0.84	GUGGUCUUGUGGAUCUAAAGGCGU		OtherRNA	ShortStack
ccm-b0.32r1-20651	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1507429-1508117	.	88	1.07	AUGAACUGCAUAGGAU		OtherRNA	ShortStack
ccm-b0.32r1-20678	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1581698-1582066	+	61	0.74	UUUGUUGUAAGAACUGUUAGGUACU		OtherRNA	ShortStack
ccm-b0.32r1-20685	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1615483-1615593	-	395	4.81	UUCGUGAGAGGGCGUGG		OtherRNA	ShortStack
ccm-b0.32r1-20692	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1621811-1621831	+	46	0.56	UUUGAAUUGUAGUCUA		OtherRNA	ShortStack
ccm-b0.32r1-20712	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1701939-1702254	.	48	0.58	AGGACUAAAACAUUGAAAAUAAAU		OtherRNA	ShortStack
ccm-b0.32r1-20716	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1707268-1707989	+	92	1.12	UUGUCUGCCUGGAGAUAAUUGCACU		OtherRNA	ShortStack
ccm-b0.32r1-20717	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1708726-1710201	+	685	8.33	AUGAUGGCUGCACAAUUCAAGGCC		OtherRNA	ShortStack
ccm-b0.32r1-20729	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1754373-1754611	+	311,505	3,789.30	GGUGGCUGUAGUUUAGUGGUAAGAAUUCCACGUU		OtherRNA	ShortStack
ccm-b0.32r1-20730	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1758639-1758838	.	113	1.38	CUAACAAACUCCAACAUGAACUGC		OtherRNA	ShortStack
ccm-b0.32r1-20740	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1777945-1778353	+	5,079	61.78	GUGGCUGUAGUUUAGUGGUAAGAAUUCCACGUU		OtherRNA	ShortStack
ccm-b0.32r1-20745	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1785414-1785723	+	403	4.90	UGUAGGACGUGUCGGC		OtherRNA	ShortStack
ccm-b0.32r1-20755	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1806342-1806879	.	92	1.12	CUGGCCCAGAGUGUAGAUCUUC		OtherRNA	ShortStack
ccm-b0.32r1-20780	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1893345-1893637	-	49	0.60	AUUGCCUUUAAGAGAGCUGAGC		OtherRNA	ShortStack
ccm-b0.32r1-20787	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1915946-1916306	+	159	1.93	AUCAGCCUCAUGAAAACCUUAUAUUCCC		OtherRNA	ShortStack
ccm-b0.32r1-20788	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:1916972-1917721	-	55	0.67	UGACCGGUACUGAAAUUUGAAUC		OtherRNA	ShortStack
ccm-b0.32r1-20812	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2021732-2021882	+	44	0.54	CCAAGAAUGAUUGUUAUAUACUCU		OtherRNA	ShortStack
ccm-b0.32r1-20833	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2114125-2114886	+	68	0.83	AAGUUGAUUGUAGAUAGGGAAAAG		OtherRNA	ShortStack
ccm-b0.32r1-20856	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2194226-2194874	.	61	0.74	AGUUUUGGUUUUGUAGAGGGAUUU		OtherRNA	ShortStack
ccm-b0.32r1-20873	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2231889-2232457	-	58	0.71	UCCGGGGACUGUUCUGAUCAUCU		OtherRNA	ShortStack
ccm-b0.32r1-20874	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2232604-2232680	+	74	0.90	UCGUUUGUAGUCCAAC		OtherRNA	ShortStack
ccm-b0.32r1-20879	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2240758-2240910	.	109	1.33	ACACUCAGAGACGGACCAAGUAGC		OtherRNA	ShortStack
ccm-b0.32r1-20883	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2254912-2255023	+	84	1.02	UGCCGGUGAUGAGAGC		OtherRNA	ShortStack
ccm-b0.32r1-20888	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2273367-2273621	+	284	3.46	CCCGGGCUUAGACACC		OtherRNA	ShortStack
ccm-b0.32r1-20889	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2273749-2273840	+	51	0.62	ACCCGGGCUGAGACAAUGUAGAAA		OtherRNA	ShortStack
ccm-b0.32r1-20890	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2274218-2274626	.	81	0.99	AAUGCAUUUGUUAAACCGACAUG		OtherRNA	ShortStack
ccm-b0.32r1-20920	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2377352-2377477	+	52	0.63	UGAAAUAUGGCUGAAGCUGCUGCA		OtherRNA	ShortStack
ccm-b0.32r1-20921	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2378866-2379056	+	45	0.55	UGGGUGACCUGGAACGCU		OtherRNA	ShortStack
ccm-b0.32r1-20922	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2379715-2379992	+	45	0.55	AGGCUUUGGGAAUGCAACUUCUGAAGAAAACUGAUAUGCC		OtherRNA	ShortStack
ccm-b0.32r1-20934	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2431323-2431732	.	44	0.54	AUGGUACUUGAACUUUAAGCUAUU		OtherRNA	ShortStack
ccm-b0.32r1-20939	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2472512-2472890	.	815	9.91	AGAGGACAGAGCGACGACCCGGGA		OtherRNA	ShortStack
ccm-b0.32r1-20940	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2473050-2473638	+	414	5.04	AGGGAGUUAAACAUUGUAGACUGU		OtherRNA	ShortStack
ccm-b0.32r1-20944	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2486840-2487126	-	75	0.91	UCUUGGCAGAGGACUGUGAUCAACC		OtherRNA	ShortStack
ccm-b0.32r1-20953	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2517061-2517700	-	212	2.58	CUCGACGACGAUCAGAU		OtherRNA	ShortStack
ccm-b0.32r1-20956	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2518749-2519487	.	348	4.23	AAAGAUUGUACAACCAAAGUUGAU		OtherRNA	ShortStack
ccm-b0.32r1-20981	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2608050-2608547	.	53	0.65	AAGAUAGUACGCAGAACUUGGUA		OtherRNA	ShortStack
ccm-b0.32r1-20997	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2650842-2652412	.	312	3.80	CUGUGGCCUGUUUAACACGAUUGCC		OtherRNA	ShortStack
ccm-b0.32r1-21025	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2721700-2722264	.	54	0.66	AUCGGUACCAUGUAGAAAUGGUUC		OtherRNA	ShortStack
ccm-b0.32r1-21028	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2737305-2737385	-	11,244	136.78	UCCAUUGUCGUCCAGCGGUUAGGAUAUCUGGCU		OtherRNA	ShortStack
ccm-b0.32r1-21030	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2738604-2738689	-	22,354	271.93	UCCAUUGUCGUCCAGCGGUUAGGAUAUCUGGCU		OtherRNA	ShortStack
ccm-b0.32r1-21037	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2782043-2782195	-	147	1.79	AUUGCCUCUUGUGUAUCUGGAUAGAGU		OtherRNA	ShortStack
ccm-b0.32r1-21038	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2782335-2782544	-	56	0.68	AUUGCCUCUUGUGUAACUGGAUA		OtherRNA	ShortStack
ccm-b0.32r1-21039	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2782635-2783531	-	79	0.96	GAAGGAGGACUACCUAAUGAUCAAG		OtherRNA	ShortStack
ccm-b0.32r1-21040	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2783860-2784154	-	105	1.28	GUUGGAGAAGCUGAAGAAAUACU		OtherRNA	ShortStack
ccm-b0.32r1-21051	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2844175-2844258	+	43	0.52	UCGGAUGAAGAAGUUGU		OtherRNA	ShortStack
ccm-b0.32r1-21072	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2943564-2944577	+	67	0.82	AACAAUUGACCCGGGUAUCCCG		OtherRNA	ShortStack
ccm-b0.32r1-21076	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:2960943-2961184	.	181	2.20	AUUCGUCCACUUUUUACUUUUGGA		OtherRNA	ShortStack
ccm-b0.32r1-21095	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3016342-3016501	+	46	0.56	UAUGGCUCAUAGGGCUGUGGAUGCUGUAGUGGGUC		OtherRNA	ShortStack
ccm-b0.32r1-21096	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3017015-3017251	+	45	0.55	UUCAAUGCUGAAUGCCU		OtherRNA	ShortStack
ccm-b0.32r1-21099	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3034689-3034935	+	73	0.89	AGAUUUUAAUUGUAGAUUGGUGCC		OtherRNA	ShortStack
ccm-b0.32r1-21101	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3035667-3035858	.	44	0.54	UGAAUUCCGAGUACUAAACUGAGU		OtherRNA	ShortStack
ccm-b0.32r1-21122	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3109792-3109873	-	548	6.67	GCGGGGAUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.32r1-21129	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3132747-3132897	.	114	1.39	GUCGCUGCCGUGAUCC		OtherRNA	ShortStack
ccm-b0.32r1-21132	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3146991-3147224	.	66	0.80	AAGAAGUCUGAACCAUUAAGUGCU		OtherRNA	ShortStack
ccm-b0.32r1-21136	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3167624-3167822	-	46	0.56	CGACUUAGAAUCAUACAGCAUG		OtherRNA	ShortStack
ccm-b0.32r1-21137	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3168016-3168848	.	119	1.45	UUUGUCUGACAGUCUUGCUU		OtherRNA	ShortStack
ccm-b0.32r1-21143	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3177602-3177845	.	44	0.54	AUUUUGAGACCGUUUGAACGCAUU		OtherRNA	ShortStack
ccm-b0.32r1-21153	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3206415-3206864	+	46	0.56	AUAAAAUGGAUUAAAGAAGUGUAUC		OtherRNA	ShortStack
ccm-b0.32r1-21179	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3297146-3297223	.	116	1.41	AAGUCAAAAGUGGACAAAGAGAGC		OtherRNA	ShortStack
ccm-b0.32r1-21189	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3323512-3323843	+	61	0.74	GGGUGGUCUGUUGCUC	miR9440	OtherRNA	ShortStack
ccm-b0.32r1-21190	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3325294-3325878	+	106	1.29	CUGAGACCCACCGUUGACAUCUCUGUUCCGGCC		OtherRNA	ShortStack
ccm-b0.32r1-21206	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3389946-3390592	+	44	0.54	AGUGGAUGGCAAGAAGCA		OtherRNA	ShortStack
ccm-b0.32r1-21214	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3413997-3414095	+	866	10.53	UUUCGUAUCGCUACGUUCUUUCUGAUU		OtherRNA	ShortStack
ccm-b0.32r1-21215	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3414219-3414397	+	10,551	128.35	UGCGUAUGAGAACAUAAAUAUUUCUGAUC		OtherRNA	ShortStack
ccm-b0.32r1-21217	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3417648-3417728	+	73	0.89	CCGAGUGACUUAUGGCCUAACUGC		OtherRNA	ShortStack
ccm-b0.32r1-21246	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold10:3537404-3537770	+	94	1.14	CGGGGAGGACGAGACUUCGGACGAGUGCAAGGUGGCUUG		OtherRNA	ShortStack
ccm-b0.32r1-80318	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:50181-50533	-	43	0.52	CAUGACGUCGGAGCACCAAUACAUAU		OtherRNA	ShortStack
ccm-b0.32r1-80319	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:50802-51366	-	78	0.95	UUAUGCUGAAAGUCAC		OtherRNA	ShortStack
ccm-b0.32r1-80320	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:52264-52431	-	95	1.16	AGGAGUAGAUGUCUAACAUUCUGUUUUGCAG		OtherRNA	ShortStack
ccm-b0.32r1-80321	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:52524-52640	-	47	0.57	AUCUUAAAUCUCUGAUU		OtherRNA	ShortStack
ccm-b0.32r1-80322	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:52964-53324	-	75	0.91	UUUAGAGACGACGUGCU		OtherRNA	ShortStack
ccm-b0.32r1-80335	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:88569-88680	.	56	0.68	CUGACGGAACUCAGAUACGCC		OtherRNA	ShortStack
ccm-b0.32r1-80343	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:106336-106432	-	46	0.56	AGAAAUGUGACGGACU		OtherRNA	ShortStack
ccm-b0.32r1-80352	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:126113-127545	.	157	1.91	UGCUUGGGUGUCGUGC		OtherRNA	ShortStack
ccm-b0.32r1-80374	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:155283-155500	.	71	0.86	AACGUAGCAUUGCCCUAAUCGGUG		OtherRNA	ShortStack
ccm-b0.32r1-80376	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:157465-157991	.	48	0.58	AGUACGUUCGUGGUGCACUUUCAU		OtherRNA	ShortStack
ccm-b0.32r1-80382	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:164369-164521	+	48	0.58	GCCGGUCUAACUCAGG		OtherRNA	ShortStack
ccm-b0.32r1-80388	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:171629-172308	.	52	0.63	AACAAUGUUGAGAGCCUUGAGAGC		OtherRNA	ShortStack
ccm-b0.32r1-80395	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:188572-189115	+	54	0.66	CUGACUCACUCUUGUGUUCUGUAG		OtherRNA	ShortStack
ccm-b0.32r1-80411	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:235637-236563	-	66	0.80	GAACCAGUCGAUCUCGGCGUC		OtherRNA	ShortStack
ccm-b0.32r1-80416	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:240358-240596	.	368	4.48	UUUGAGAAUAUCGUUAGAGAUUAGC		OtherRNA	ShortStack
ccm-b0.32r1-80428	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:261757-262498	.	51	0.62	AGUUUGUAGAUCUUUUGAUUAGUU		OtherRNA	ShortStack
ccm-b0.32r1-80429	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:263136-263384	.	101	1.23	CGGACUACGAGCAACGUUUAAUGU		OtherRNA	ShortStack
ccm-b0.32r1-80437	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:277169-278287	+	107	1.30	CCGCCAAUCGCGGAAUCGGCC		OtherRNA	ShortStack
ccm-b0.32r1-80438	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:281930-282103	-	7,383	89.81	AAGAAUGAUGAGUCGAUU		OtherRNA	ShortStack
ccm-b0.32r1-80449	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:306818-307389	.	204	2.48	UUGGACGUGCCGGAGC		OtherRNA	ShortStack
ccm-b0.32r1-80453	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:328997-329214	.	127	1.55	AGGACGAGUAGGAGUAGACAGACU		OtherRNA	ShortStack
ccm-b0.32r1-80462	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:351936-352337	.	140	1.70	GACGGACAUAGGUAGUACUCCUA		OtherRNA	ShortStack
ccm-b0.32r1-80467	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:364825-365342	-	60	0.73	GAAAUAGGACUUUGCACUGUGUA		OtherRNA	ShortStack
ccm-b0.32r1-80494	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:423099-423346	+	57	0.69	AGGACUCGAGUAGGGC		OtherRNA	ShortStack
ccm-b0.32r1-80495	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:430904-431714	.	62	0.75	AUGUGGGAUUUGAGAGUUAUUACC		OtherRNA	ShortStack
ccm-b0.32r1-80553	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:593578-594787	.	81	0.99	UCCGACAGGGAGCCCAACACU		OtherRNA	ShortStack
ccm-b0.32r1-80555	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:599308-600462	-	96	1.17	ACAGGACUUGUACUUGGGGAGCCC		OtherRNA	ShortStack
ccm-b0.32r1-80556	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:603347-603947	-	56	0.68	AUUCCGGUACCAUGUAGCAGU		OtherRNA	ShortStack
ccm-b0.32r1-80558	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:622133-622324	.	65	0.79	UUUGUUGAAAUAACUCUUAGGUCCC		OtherRNA	ShortStack
ccm-b0.32r1-80564	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:644985-645075	+	134,094	1,631.19	UCCGCUGUAGCAAUGGC		OtherRNA	ShortStack
ccm-b0.32r1-80591	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:747561-747830	.	52	0.63	UACCAAAAUAGGACAUUCAUGUUU		OtherRNA	ShortStack
ccm-b0.32r1-80593	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:751880-752374	-	247	3.01	GAGACGGCGAAGAAUGGAUCUGAUU		OtherRNA	ShortStack
ccm-b0.32r1-80597	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:757652-758687	+	1,641	19.96	AUUCGAGCUUUUUAAAACUGAUGCCC		OtherRNA	ShortStack
ccm-b0.32r1-80600	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:763972-764312	.	52	0.63	AAGCCGGGAAAAGUAAGCAAGCCU		OtherRNA	ShortStack
ccm-b0.32r1-80608	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:795480-795898	.	289	3.52	CCGUGAUCGUGGUCUA		OtherRNA	ShortStack
ccm-b0.32r1-80631	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:885509-886341	+	50	0.61	CUAGGGAUUUGUAUGAGAUAUUGAUGGAUGAGAAU		OtherRNA	ShortStack
ccm-b0.32r1-80663	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:983286-983453	+	372	4.53	GGGGAUGUGGCUCAGA		OtherRNA	ShortStack
ccm-b0.32r1-80664	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:997013-997331	-	859	10.45	GGGGAUGUAGCUCAAA		OtherRNA	ShortStack
ccm-b0.32r1-80665	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:1005941-1006134	-	106	1.29	GGGGAUGUAGCUCAAA		OtherRNA	ShortStack
ccm-b0.32r1-80687	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:1050728-1051751	-	99	1.20	UCUUUUGUCGUUGUGAUA		OtherRNA	ShortStack
ccm-b0.32r1-80690	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:1057649-1057951	.	57	0.69	AUGGAAUAAUCUCAAUCUGGCCCU		OtherRNA	ShortStack
ccm-b0.32r1-80692	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:1065355-1065972	.	78	0.95	AUGUGACUGUAAUACAUACUUCCU		OtherRNA	ShortStack
ccm-b0.32r1-80697	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:1094091-1094633	.	79	0.96	AUCGGAGUUUACGAGGAAUGCGCC		OtherRNA	ShortStack
ccm-b0.32r1-80708	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:1108999-1109477	.	53	0.65	AGGUUCAUGAACUCCAUUUUGAGA		OtherRNA	ShortStack
ccm-b0.32r1-80759	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:1227182-1227804	.	61	0.74	CAAUUCGGAGCCGCCGGCGACG		OtherRNA	ShortStack
ccm-b0.32r1-80762	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:1230488-1231216	.	62	0.75	AGUGUUAUCGUUUUGAAAAGGCU		OtherRNA	ShortStack
ccm-b0.32r1-80766	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:1239638-1240397	+	75	0.91	CUAUGUUUAACUUGAUGAUAUUCU		OtherRNA	ShortStack
ccm-b0.32r1-80782	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold100:1278481-1278658	.	104	1.27	ACUAUAUGUUUGUGACUCC		OtherRNA	ShortStack
ccm-b0.32r1-80805	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:58962-59258	.	44	0.54	AAUAACGUUAGAGAUUAGAGUUACC		OtherRNA	ShortStack
ccm-b0.32r1-80815	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:116816-117565	.	103	1.25	GUUUCAGGGGUGUACACUUGGUGU		OtherRNA	ShortStack
ccm-b0.32r1-80839	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:209981-210748	.	249	3.03	UUCAUCGGAACUGUUAUAGUC		OtherRNA	ShortStack
ccm-b0.32r1-80843	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:226037-226586	.	47	0.57	AACUUCUCAGCCCCAAGAACGCCU		OtherRNA	ShortStack
ccm-b0.32r1-80954	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:731691-731955	-	198	2.41	GUUUGGUCUAGUGGUAUGAUUCUCGCU		OtherRNA	ShortStack
ccm-b0.32r1-80965	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:776664-776773	+	47	0.57	AAAACGAGGUAGAGAAAAU		OtherRNA	ShortStack
ccm-b0.32r1-80969	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:801716-802333	.	70	0.85	ACCGACCUUGAUCUUCG		OtherRNA	ShortStack
ccm-b0.32r1-80975	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:829025-829907	.	89	1.08	UUGUCGCUAAGGUUCGA		OtherRNA	ShortStack
ccm-b0.32r1-80984	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:844031-844260	.	53	0.65	AAUUCGGUUCGGUUCUAGUGACAC		OtherRNA	ShortStack
ccm-b0.32r1-81013	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:922462-922714	.	60	0.73	AACAGAAACAGUCGGUAAAACAGC		OtherRNA	ShortStack
ccm-b0.32r1-81028	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:1011378-1011679	.	612	7.45	AGGCACAAGUAGAUCUAAAAUGGA		OtherRNA	ShortStack
ccm-b0.32r1-81080	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold101:1147770-1148394	.	53	0.65	AACAUUAUAUGGACGGAACCGGGA		OtherRNA	ShortStack
ccm-b0.32r1-81167	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:207621-208620	-	166	2.02	AUAGGACUUUCCAUCUUUUUUAGA		OtherRNA	ShortStack
ccm-b0.32r1-81168	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:208746-209086	-	113	1.38	AAGUAGGAUGUGAUGUGUAGAUC		OtherRNA	ShortStack
ccm-b0.32r1-81169	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:209236-209531	-	79	0.96	ACGUAGCGCCUGCAUA		OtherRNA	ShortStack
ccm-b0.32r1-81199	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:313166-314793	.	126	1.53	AAUCUCUCGGGAGACUGGACUAGC		OtherRNA	ShortStack
ccm-b0.32r1-81220	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:402557-402911	.	50	0.61	AAUCGGAUCAACCGAAUCGGUUUC		OtherRNA	ShortStack
ccm-b0.32r1-81225	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:412425-412575	.	55	0.67	AAAUUAUCCGGGCAAGAACGACC		OtherRNA	ShortStack
ccm-b0.32r1-81228	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:427567-427720	-	74	0.90	AAGAGGUCUGAACCAUUAAAAGCU		OtherRNA	ShortStack
ccm-b0.32r1-81245	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:488688-488868	-	52	0.63	AAGACGUUAAUGCUAAUCUCUGAC		OtherRNA	ShortStack
ccm-b0.32r1-81250	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:496218-496393	+	66	0.80	AGGAGCUGGAUGUUGGAAGAAACU		OtherRNA	ShortStack
ccm-b0.32r1-81269	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:565688-566083	.	85	1.03	AUCUAUUGUAGACAAAAAAAAGCU		OtherRNA	ShortStack
ccm-b0.32r1-81279	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:610984-611305	.	64	0.78	AGAUCUGUGAGGAAUUUAAGAUAAC		OtherRNA	ShortStack
ccm-b0.32r1-81282	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:626409-627361	-	57	0.69	CUAUGAAGACUGUGAUCGGACA		OtherRNA	ShortStack
ccm-b0.32r1-81292	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:651892-652302	-	56	0.68	CUUCUUCAGAAACAAACACAUCAUGAUCGAUCUCGGCACUG		OtherRNA	ShortStack
ccm-b0.32r1-81296	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:674890-675640	.	71	0.86	CGGGUUCGAAUGAGGUAGUACUUU		OtherRNA	ShortStack
ccm-b0.32r1-81297	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:691853-692169	-	55	0.67	GAUGGUCGGAUUCAAUCUGUGGAUACUUUUCGGCUUU		OtherRNA	ShortStack
ccm-b0.32r1-81303	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:713170-713677	.	55	0.67	GAGGUUGAUGAUUAGAAUGAGUC		OtherRNA	ShortStack
ccm-b0.32r1-81311	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:754779-754858	-	55	0.67	AGGAGUAAAAGAUGUGGGACACUU		OtherRNA	ShortStack
ccm-b0.32r1-81315	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:761808-761996	.	53	0.65	GCGGCGGAAUAAACUCCUUGGUGU		OtherRNA	ShortStack
ccm-b0.32r1-81316	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:778684-779222	.	44	0.54	AGUCAUGUGUGAUCUUGUUGGAUU		OtherRNA	ShortStack
ccm-b0.32r1-81356	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:899039-900104	+	72	0.88	CUGGAAUCUCUGGUCA		OtherRNA	ShortStack
ccm-b0.32r1-81359	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:902481-902808	.	49	0.60	ACUUUGCAUUGUGGUAACGUGGC		OtherRNA	ShortStack
ccm-b0.32r1-81361	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:903813-903893	-	4,843	58.91	UCCGCUGUAGCGUAGGCU		OtherRNA	ShortStack
ccm-b0.32r1-81372	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:953898-954681	+	47,551	578.43	UCCGCUGUAGCACCGGC		OtherRNA	ShortStack
ccm-b0.32r1-81373	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:957618-957663	+	47	0.57	UCCACUGUAGCAAAGGCU		OtherRNA	ShortStack
ccm-b0.32r1-81379	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:969821-969964	+	154	1.87	UCCGCUGUAGCGCAGGCU		OtherRNA	ShortStack
ccm-b0.32r1-81388	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:995550-996023	-	52	0.63	AAGGAACAAAGACUGAAGACGGGU		OtherRNA	ShortStack
ccm-b0.32r1-81389	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:997170-997431	.	123	1.50	AUUCAGAUCUGUGAAGCAACUUAGC		OtherRNA	ShortStack
ccm-b0.32r1-81407	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:1046565-1046784	.	45	0.55	AAAGGAUAAAAUUUGUUAGACUAU		OtherRNA	ShortStack
ccm-b0.32r1-81423	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:1078516-1078827	-	42	0.51	AACGAGUAAGAGGUCUGAACCAUA		OtherRNA	ShortStack
ccm-b0.32r1-81431	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:1129310-1129678	.	217	2.64	AUUCAGACUCUGUAUAAUU		OtherRNA	ShortStack
ccm-b0.32r1-81437	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:1137986-1139115	.	309	3.76	UUCUUGGGUGUCAUGC		OtherRNA	ShortStack
ccm-b0.32r1-81450	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:1198180-1198336	+	2,764	33.62	UACUAUGAUGGCUACAAGUAUUCGUACUGACUGAUC		OtherRNA	ShortStack
ccm-b0.32r1-81451	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:1198441-1198524	+	270	3.28	AUUAGCUCUAACUGAUA		OtherRNA	ShortStack
ccm-b0.32r1-81452	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold102:1198629-1198711	+	276	3.36	UGAGGUGAUGAAUGUUAUG		OtherRNA	ShortStack
ccm-b0.32r1-81474	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:18-430	.	314	3.82	GAAUAGAUCUCUUAGACUAGAGUC		OtherRNA	ShortStack
ccm-b0.32r1-81475	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:994-1083	+	109	1.33	AACGGAAACUCAAGAGAUUGUAGC		OtherRNA	ShortStack
ccm-b0.32r1-81476	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:2254-4598	.	1,970	23.96	AUUCGGCAAGAAUAUUAGGAUUGC		OtherRNA	ShortStack
ccm-b0.32r1-81477	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:5022-5660	.	282	3.43	AUUUCUUUCGGUAAAUAUGGACUU		OtherRNA	ShortStack
ccm-b0.32r1-81478	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:5796-8459	.	4,704	57.22	AUGCCACACAAUGGCUGUAGACCU		OtherRNA	ShortStack
ccm-b0.32r1-81479	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:10199-10877	.	286	3.48	UUGAAAUUCCGAUUGAAACUC		OtherRNA	ShortStack
ccm-b0.32r1-81480	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:17419-17690	+	388	4.72	AGGGAUGUAGCGCAGCU		OtherRNA	ShortStack
ccm-b0.32r1-81482	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:33972-34328	.	65	0.79	GGAUGUUGGCUGUCAGCUGUUGGC		OtherRNA	ShortStack
ccm-b0.32r1-81501	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:134945-135103	-	43	0.52	AUUCAGACUUUGUAUAAUACUUAACU		OtherRNA	ShortStack
ccm-b0.32r1-81513	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:204301-204573	.	58	0.71	AAUUAAUGUUAGCAUUUUGGAUA		OtherRNA	ShortStack
ccm-b0.32r1-81518	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:219304-219742	+	47	0.57	CGGGCUGGUAGGCGCA		OtherRNA	ShortStack
ccm-b0.32r1-81521	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:264937-265794	.	95	1.16	AAUUUAGAUCUGUGCCAUGGUAGC		OtherRNA	ShortStack
ccm-b0.32r1-81532	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:304941-305261	.	345	4.20	AGGGUCCCGGACAUGAUUUGAACA		OtherRNA	ShortStack
ccm-b0.32r1-81539	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:333940-334696	.	62	0.75	AAUGGGCCUUAAGAAAUAUGCACC		OtherRNA	ShortStack
ccm-b0.32r1-81541	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:339425-339530	-	56	0.68	GAAGCUGUGGGAUGUA		OtherRNA	ShortStack
ccm-b0.32r1-81547	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:358745-359084	+	54	0.66	UUGGAAGGCCUGGAAAACAUUCUGAAGAUUGG		OtherRNA	ShortStack
ccm-b0.32r1-81551	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:373945-374244	.	196	2.38	AUACGAUCGGCCAGUCAAAACAGC		OtherRNA	ShortStack
ccm-b0.32r1-81570	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:433017-433278	-	48	0.58	AGAGAAAAAACGUUGUCUGACC		OtherRNA	ShortStack
ccm-b0.32r1-81571	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:433486-433639	-	59	0.72	UCUCGUGCUCGUAGGAUGAAGGAGGCAAAGCGGAAGGG		OtherRNA	ShortStack
ccm-b0.32r1-81574	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:444280-444340	-	135	1.64	CCUUGUGGUCGUGGGU		OtherRNA	ShortStack
ccm-b0.32r1-81591	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:506000-506209	-	48	0.58	GAUGUGGACUAUUAUG		OtherRNA	ShortStack
ccm-b0.32r1-81592	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:506448-506877	-	61	0.74	GUGGAACUUCUGCUUGCUCCGUCCCGAUA		OtherRNA	ShortStack
ccm-b0.32r1-81626	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:588210-588452	+	3,584	43.60	UGGCUGUGAUGAUCGAAACU		OtherRNA	ShortStack
ccm-b0.32r1-81655	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:700135-701122	+	46	0.56	CACCCCGCGUGUAACAUAUUCGGACCCCGGAGUAG		OtherRNA	ShortStack
ccm-b0.32r1-81670	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:760025-760501	-	131	1.59	CUAUGUGUAGACGAGU		OtherRNA	ShortStack
ccm-b0.32r1-81671	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:762296-762551	-	63	0.77	GUAAGAGAAUCGGAUCAAAAUCAAGA		OtherRNA	ShortStack
ccm-b0.32r1-81675	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:785314-786826	-	681	8.28	CUGGAGCUCGGACGCA		OtherRNA	ShortStack
ccm-b0.32r1-81687	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:809472-809640	.	53	0.65	CCUAUUUGAGGAGCCA		OtherRNA	ShortStack
ccm-b0.32r1-81707	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:846074-846303	+	46	0.56	UGUUGUUGAUCGUGUGCUU		OtherRNA	ShortStack
ccm-b0.32r1-81724	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:905269-905342	+	136	1.65	CAACGAGUUAGCGAACAGGACUGC		OtherRNA	ShortStack
ccm-b0.32r1-81730	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:943954-944424	.	42	0.51	UGUCUGUAAGAAUGUGAGGUA		OtherRNA	ShortStack
ccm-b0.32r1-81733	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:947465-948268	.	68	0.83	AUAGUGAUGAUAGAAGUGUGGUGG		OtherRNA	ShortStack
ccm-b0.32r1-81735	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:950387-950896	-	42	0.51	CAGGGCUCCGACGACUAC		OtherRNA	ShortStack
ccm-b0.32r1-81739	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:975302-975951	-	265	3.22	AGGUGAGAUGCUCGGCGGAGA		OtherRNA	ShortStack
ccm-b0.32r1-81748	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:1015067-1016230	-	76	0.93	GGAGGAGCUGUGGGGGGAGGA		OtherRNA	ShortStack
ccm-b0.32r1-81753	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:1040316-1040518	+	53	0.65	CGGUCGGAUGUGGAACA		OtherRNA	ShortStack
ccm-b0.32r1-81788	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:1158908-1159295	.	91	1.11	ACCCUACUACUGUGGGAUUCACCU		OtherRNA	ShortStack
ccm-b0.32r1-81798	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:1184642-1184842	-	154	1.87	AUACCCAUAGACUCUUGGUUCGCUAUGAUGCCUACAUCU		OtherRNA	ShortStack
ccm-b0.32r1-81801	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:1204221-1204376	-	395	4.81	UCUAAUGACAGAAACAUGUAAAAUGAUCUGAGGCCA		OtherRNA	ShortStack
ccm-b0.32r1-81802	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:1204495-1204637	-	234	2.85	GAUACAUGUAUAUGAUCUGAGGCCU		OtherRNA	ShortStack
ccm-b0.32r1-81803	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold103:1204754-1204836	-	1,162	14.14	UCUCAUGACAGAGACAUGUAUAUGAUCUGAGGCCU		OtherRNA	ShortStack
ccm-b0.32r1-132608	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1036:2480-3416	.	51	0.62	AAAGAUCUGCCAGUAGUGCUCUGU		OtherRNA	ShortStack
ccm-b0.32r1-81847	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:127530-129811	.	1,393	16.95	ACAGAGAUUCUCUCAUCGGAUUGA		OtherRNA	ShortStack
ccm-b0.32r1-81848	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:129912-132280	.	5,750	69.95	AGAAUCGCUGAACUAAACUAAAGA		OtherRNA	ShortStack
ccm-b0.32r1-81849	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:132501-133045	.	491	5.97	CUUUGAUCCGCGUCUCCU		OtherRNA	ShortStack
ccm-b0.32r1-81850	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:133132-133794	.	217	2.64	GAGUGUGCUUGUAGGCU		OtherRNA	ShortStack
ccm-b0.32r1-81854	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:142476-142547	+	67	0.82	UAAAAGGUAAGUGGACAAAGACA		OtherRNA	ShortStack
ccm-b0.32r1-81864	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:223669-224217	.	114	1.39	AGCUCCGACUGCAUAAUCACUGGC		OtherRNA	ShortStack
ccm-b0.32r1-81892	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:370045-370338	.	46	0.56	CCCGUGGACUGUGAAACU		OtherRNA	ShortStack
ccm-b0.32r1-81898	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:417797-417923	.	44	0.54	ACGAAUAUCAGAACCAUGAAGAAC		OtherRNA	ShortStack
ccm-b0.32r1-81948	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:643828-644502	.	59	0.72	AAGAUGUGAUGGAUAGAUUAUUAGC		OtherRNA	ShortStack
ccm-b0.32r1-81953	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:650335-650723	-	44	0.54	ACUGUUGGACACUUUUGC		OtherRNA	ShortStack
ccm-b0.32r1-81954	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:652010-652819	-	95	1.16	GAGUAAGAUGGAGAACUCCCAGU		OtherRNA	ShortStack
ccm-b0.32r1-81962	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:668347-669382	.	106	1.29	CGUUAAGAAGGACGUAGACAUG		OtherRNA	ShortStack
ccm-b0.32r1-81985	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:733772-735982	.	754	9.17	UGAGAUUUUGCACUUUCGGCCU		OtherRNA	ShortStack
ccm-b0.32r1-81986	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:736071-737333	.	1,555	18.92	AUUUCCAUUUCGUCGAAUAUGUAA		OtherRNA	ShortStack
ccm-b0.32r1-81989	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:738855-739191	-	49	0.60	UUGACUGUGAUUAUAGUAGACUACU		OtherRNA	ShortStack
ccm-b0.32r1-82030	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:913760-914127	.	76	0.93	CUAAGGGACUGAGAUC		OtherRNA	ShortStack
ccm-b0.32r1-82046	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:952533-953298	.	136	1.65	UGAUUGUGGUAGGCAGC		OtherRNA	ShortStack
ccm-b0.32r1-82056	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:972541-972694	.	49	0.60	GGGGCGUGGACCAGCA		OtherRNA	ShortStack
ccm-b0.32r1-82087	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1068124-1068516	.	66	0.80	UAAGAGGUCUGAACCAUUAAGUGA		OtherRNA	ShortStack
ccm-b0.32r1-82095	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1089202-1089757	.	146	1.78	UGAGGGAUUGGCGGUUGUAGUGGG		OtherRNA	ShortStack
ccm-b0.32r1-82114	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1176829-1177401	.	93	1.13	AAGUGACGAGCUCUCGAAAAGAAG		OtherRNA	ShortStack
ccm-b0.32r1-82127	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1211024-1212307	+	610	7.42	CUGACUUUGUGAAAUA	miR7631	OtherRNA	ShortStack
ccm-b0.32r1-82133	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1240740-1241529	-	50	0.61	UGGGAGUUGUUGUGGGAUGGGCA		OtherRNA	ShortStack
ccm-b0.32r1-82188	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1526947-1527671	-	107	1.30	AUGAGAACUUUGAAGA		OtherRNA	ShortStack
ccm-b0.32r1-82189	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1529547-1529907	.	42	0.51	UUUUCGUUGACUACACA		OtherRNA	ShortStack
ccm-b0.32r1-82219	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1618847-1619681	.	106	1.29	GAUUUGUGAUUGUGUGUUUUUCGC		OtherRNA	ShortStack
ccm-b0.32r1-82223	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1624081-1624311	.	57	0.69	CGUAGUCUUUUCCGAGCCUUGCAC		OtherRNA	ShortStack
ccm-b0.32r1-82224	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1624390-1624625	-	51	0.62	AUUGAAGAUGAACUAC		OtherRNA	ShortStack
ccm-b0.32r1-82233	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1679004-1679190	.	45	0.55	AGUGUAAUGGUAGAGUGAUAGUUC		OtherRNA	ShortStack
ccm-b0.32r1-82268	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1788786-1789295	.	59	0.72	ACGGACCGGGAACAACAGUGGGAC		OtherRNA	ShortStack
ccm-b0.32r1-82278	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1808529-1808953	.	57	0.69	CCCACGGUCGGUGCCA	miR5054	OtherRNA	ShortStack
ccm-b0.32r1-82327	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:1989333-1989352	+	464	5.64	GGUUGCUUUGAUUCCC	miR1095	OtherRNA	ShortStack
ccm-b0.32r1-82353	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2091939-2092584	+	134	1.63	AUCAGACUUCGUUUGGCCUUUGAUC		OtherRNA	ShortStack
ccm-b0.32r1-82357	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2107803-2107962	+	343	4.17	GUUGCUAACAUUUCUGGAUUGGUAG		OtherRNA	ShortStack
ccm-b0.32r1-82380	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2181377-2181839	.	71	0.86	AGAAUACCUUUGGCGAUCGCGAUG		OtherRNA	ShortStack
ccm-b0.32r1-82390	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2215636-2216067	.	58	0.71	AGGACCCUAGAAGGCUU		OtherRNA	ShortStack
ccm-b0.32r1-82399	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2251422-2251696	+	356	4.33	AAAAAUGACUCUCGGG		OtherRNA	ShortStack
ccm-b0.32r1-82419	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2349789-2350742	.	54	0.66	AUAGGACCAAAUAUAAAUCUGA		OtherRNA	ShortStack
ccm-b0.32r1-82420	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2352312-2352496	+	279	3.39	UCGCAACCUUAAUGUCUGGACCUUUU		OtherRNA	ShortStack
ccm-b0.32r1-82467	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2501480-2502174	.	61	0.74	AGCGGUGAAAUUGCGUUG		OtherRNA	ShortStack
ccm-b0.32r1-82476	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2527138-2527437	.	70	0.85	AACGUUGUCUGAUUGAGUAAUUGG		OtherRNA	ShortStack
ccm-b0.32r1-82479	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2537786-2538513	.	50	0.61	UGAAGGAGCUUGGGAAAAAGAUG		OtherRNA	ShortStack
ccm-b0.32r1-82512	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2614677-2615010	.	77	0.94	AAUGUGAUCAGUCAACUGUUGGUG		OtherRNA	ShortStack
ccm-b0.32r1-82523	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2634267-2634806	-	64	0.78	UUGCAGGGUGGAUCGGGUG		OtherRNA	ShortStack
ccm-b0.32r1-82524	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2635825-2636219	-	80	0.97	AAGGCCACCAUUGAGAAU		OtherRNA	ShortStack
ccm-b0.32r1-82528	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2652709-2653564	.	96	1.17	ACAAGGUGAAUAAAGUUUGACUCU		OtherRNA	ShortStack
ccm-b0.32r1-82529	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2657311-2657435	-	52	0.63	UUUCGGGGGAUGGAUG		OtherRNA	ShortStack
ccm-b0.32r1-82543	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2678353-2678802	.	44	0.54	UAUGUGAGCUUGAUACCU		OtherRNA	ShortStack
ccm-b0.32r1-82546	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2692064-2692357	.	92	1.12	AAGAACUGCCAUGUACCCCUAAUU		OtherRNA	ShortStack
ccm-b0.32r1-82550	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2702222-2702501	.	104	1.27	ACGGUCAGAUGACGCAAAGCUCAU		OtherRNA	ShortStack
ccm-b0.32r1-82555	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2718800-2719109	.	62	0.75	AGGUGCUGGAGCUGGAGGUGGUGU		OtherRNA	ShortStack
ccm-b0.32r1-82569	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2752513-2752767	.	64	0.78	GUAGGUGGUGGAGUCGGAGGUG		OtherRNA	ShortStack
ccm-b0.32r1-82573	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold104:2771146-2771615	.	45	0.55	GGUGGACAUUUACUUGAAUAAUA		OtherRNA	ShortStack
ccm-b0.32r1-132612	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1040:705-1244	-	271,961	3,308.27	AGGGAUCGGUGGAUGUUGCUUUUAGGACUCUACCGGCACC		OtherRNA	ShortStack
ccm-b0.32r1-132627	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1055:28350-28434	-	90	1.10	AUCAGAACCCCGAAGUUAAGCGU		OtherRNA	ShortStack
ccm-b0.32r1-132628	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1055:29017-29136	-	150	1.83	GAGUAGUACUAGGAUGGGCGACCCCCUGGGAAGUCCU		OtherRNA	ShortStack
ccm-b0.32r1-132638	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1069:50-443	+	199	2.42	CAGUGCUCUGAAUGUA		OtherRNA	ShortStack
ccm-b0.32r1-132639	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1070a:4782-4961	+	122	1.48	AUGCACCGGAUCCCAUCAGAACUCUGAAGUUAAG		OtherRNA	ShortStack
ccm-b0.32r1-132640	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1070a:9026-9204	+	1,028	12.51	CGAGAGUAGUACUAGGAAGGGUGACCCCCUGGGAAGUCCU		OtherRNA	ShortStack
ccm-b0.32r1-132641	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1070b:164-226	+	79	0.96	CUCGUGUUGUACCCCU		OtherRNA	ShortStack
ccm-b0.32r1-132642	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1070b:845-912	+	262	3.19	UUGGGCGAGAAUAGUACUAGGAUGGGUGACCCCCU		OtherRNA	ShortStack
ccm-b0.32r1-132643	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1070b:4045-4136	+	1,422	17.30	UGGGCGAGAGUAGUACC		OtherRNA	ShortStack
ccm-b0.32r1-132644	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1070b:11513-11763	+	260	3.16	ACCCCUGGGAAGUCCUUGUGUUGCACCCGU		OtherRNA	ShortStack
ccm-b0.32r1-132646	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1073b:1758-2110	-	46	0.56	AUUUAAAGGCUCAACCUACCCAUC		OtherRNA	ShortStack
ccm-b0.32r1-82601	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:9585-10249	.	96	1.17	AUAAGACUGGCCAGCGAUGAUACG		OtherRNA	ShortStack
ccm-b0.32r1-82602	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:12194-12763	-	48	0.58	CCGACCAUCAUGGCAUGGGAACUCAUGAACGAGCCUCGCU		OtherRNA	ShortStack
ccm-b0.32r1-82603	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:12888-13564	.	90	1.10	UGAAAAACGCGUUCGUCGUAGACG		OtherRNA	ShortStack
ccm-b0.32r1-82604	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:15958-16036	.	45	0.55	GAGACCAUAAUGAUCAACGACUA		OtherRNA	ShortStack
ccm-b0.32r1-82621	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:52659-53652	.	142	1.73	AUGCUAGAAAUCAAUGACACU		OtherRNA	ShortStack
ccm-b0.32r1-82624	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:80740-80843	.	43	0.52	AAUAAGUCGUCCGGUAAAGUUGGA		OtherRNA	ShortStack
ccm-b0.32r1-82626	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:87176-87741	+	97	1.18	CCUCUCUCACCCCACCA		OtherRNA	ShortStack
ccm-b0.32r1-82638	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:131557-131999	-	43	0.52	GGGGAUGUAGGAUCAUUG		OtherRNA	ShortStack
ccm-b0.32r1-82651	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:156437-157992	.	369	4.49	CAGCCGGAGAGGGAUCGAGCCU		OtherRNA	ShortStack
ccm-b0.32r1-82662	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:203100-203378	.	71	0.86	CUGGAAAAUAAAAACAUAUGAUA		OtherRNA	ShortStack
ccm-b0.32r1-82665	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:210771-211232	-	230	2.80	CUACGAGUCGGGUUGC	miR11067	OtherRNA	ShortStack
ccm-b0.32r1-82671	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:226334-226708	.	43	0.52	UUAUGAGAUUCUAGGAUUUGGUAGC		OtherRNA	ShortStack
ccm-b0.32r1-82675	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:230201-231026	-	149	1.81	ACCGUAGGUGCUCCAAUUGAACUG		OtherRNA	ShortStack
ccm-b0.32r1-82681	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:259007-259162	+	3,779	45.97	GGGGAUGUAGCUCAGA		OtherRNA	ShortStack
ccm-b0.32r1-82691	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:270650-270954	-	3,786	46.06	GUGAAUGAUGAUUUGUCGUUGGGAAUCUCUCUGAUGCA		OtherRNA	ShortStack
ccm-b0.32r1-82694	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:280480-280920	+	65	0.79	AUGCCAGAAGAAAUGUGUGAAGG		OtherRNA	ShortStack
ccm-b0.32r1-82695	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:281716-281889	+	50	0.61	CGAGGAAAUGGGAGGGCAUGCUGUUAAACUC		OtherRNA	ShortStack
ccm-b0.32r1-82731	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:423074-423813	-	45	0.55	UAUAAAUCCAGUCAUAACUGAACCAGAUCAUCGUCUUC		OtherRNA	ShortStack
ccm-b0.32r1-82743	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:450891-451365	-	70	0.85	GAACCUGGACGGUCUGAAUGAGCUGAACC		OtherRNA	ShortStack
ccm-b0.32r1-82744	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:452527-453149	-	44	0.54	UUUGACUGUGGAUUUCGCCAAU		OtherRNA	ShortStack
ccm-b0.32r1-82756	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:486785-487096	+	81	0.99	AGGUAGAAGACAGUGAAUUAGCAGAUGUGGCU		OtherRNA	ShortStack
ccm-b0.32r1-82757	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:489958-490116	+	60	0.73	CAUCUGUAGCCAAGACGUUCUUGAUGUCCGA		OtherRNA	ShortStack
ccm-b0.32r1-82760	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:493843-494088	.	42	0.51	AAAACCCCCUCUACUUUCAAAAGU		OtherRNA	ShortStack
ccm-b0.32r1-82763	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:503146-503470	.	112	1.36	AUACAGAGUCUGAAUGGUCAAGAC		OtherRNA	ShortStack
ccm-b0.32r1-82767	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:507387-507880	.	46	0.56	CCGAGACCAGAACCCUGCUGUU		OtherRNA	ShortStack
ccm-b0.32r1-82778	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:571261-571860	-	55	0.67	UGGCAGUGAUGUGCUUGAGCCGC		OtherRNA	ShortStack
ccm-b0.32r1-82808	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:657621-657891	.	159	1.93	AACGGUGUAGAUUACUUUGAAAAC		OtherRNA	ShortStack
ccm-b0.32r1-82816	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:685048-685661	-	69	0.84	CCCUGGGAUGAUGAGAAAACUGC		OtherRNA	ShortStack
ccm-b0.32r1-82825	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:710419-710504	.	44	0.54	AACCGGUUAGCGCUCUUAGGGGAC		OtherRNA	ShortStack
ccm-b0.32r1-82855	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:785414-785686	+	47	0.57	AGAUAAUUAGUGUCUGUAGAUCAC		OtherRNA	ShortStack
ccm-b0.32r1-82873	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:850549-850639	+	56	0.68	UCCGCUGUAGCAUAGGC		OtherRNA	ShortStack
ccm-b0.32r1-82883	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:875515-875984	+	50	0.61	GGCGGACUCGUCACUGCCCGAGGA		OtherRNA	ShortStack
ccm-b0.32r1-82889	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:909154-909529	-	255	3.10	UUGGGCUUGCACUACUCCCUCGGCCCGGCACACCC		OtherRNA	ShortStack
ccm-b0.32r1-82898	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:936858-936919	+	1,608	19.56	GGGGAUGUAGCUCAGA		OtherRNA	ShortStack
ccm-b0.32r1-82902	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:959644-959846	.	48	0.58	UACCAUUACGAUCCAGUGUAGUACC		OtherRNA	ShortStack
ccm-b0.32r1-82907	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:996586-996960	.	54	0.66	AAGUGGGAAGAAAGUUUUAGGACA		OtherRNA	ShortStack
ccm-b0.32r1-82915	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:1015509-1016148	.	98	1.19	AACAGACAACUUAUUUUGGGACA		OtherRNA	ShortStack
ccm-b0.32r1-82931	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:1077479-1077665	.	42	0.51	ACCGAAUGGUAGAUCGUCUUGGGA		OtherRNA	ShortStack
ccm-b0.32r1-82936	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:1084697-1085676	.	62	0.75	AGGAACUGGCCAAUGCGACUCAAGU		OtherRNA	ShortStack
ccm-b0.32r1-82940	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:1100068-1100927	+	165	2.01	UCAUGUCAUUGUGGAGA		OtherRNA	ShortStack
ccm-b0.32r1-82941	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:1101805-1102274	+	100	1.22	CAUUGUGUAUCGUGGGUUGC		OtherRNA	ShortStack
ccm-b0.32r1-82942	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold108:1102514-1103398	+	124	1.51	CUUGGGAUUUUAUCAGUACUCUAUAAUCGUAUUCGUGUU		OtherRNA	ShortStack
ccm-b0.32r1-132648	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1081:55-364	-	3,939	47.92	UGCACCGGAUCCCAUCAGAACUCUGAAGUUA		OtherRNA	ShortStack
ccm-b0.32r1-132649	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1081:4596-4739	-	46	0.56	GCACCGGAUCCCAUCAGAACUCCGAAGUUACGC		OtherRNA	ShortStack
ccm-b0.32r1-82952	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:12357-12844	+	58	0.71	GGAGGACAAUGACUAUGAUG		OtherRNA	ShortStack
ccm-b0.32r1-83030	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:516228-517170	-	180	2.19	GAUGUCCUGCGUAACUUU		OtherRNA	ShortStack
ccm-b0.32r1-83031	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:518308-518710	-	65	0.79	UGGCGAGCUGAACCAUGUU		OtherRNA	ShortStack
ccm-b0.32r1-83032	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:519269-519864	-	128	1.56	AGCCGGAAUCUGCAGGACUUG		OtherRNA	ShortStack
ccm-b0.32r1-83035	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:521831-523684	.	319	3.88	UGGGUGUGGAUCAUUG		OtherRNA	ShortStack
ccm-b0.32r1-83038	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:553380-553813	.	67	0.82	ACGGAUUCAUUUUUUUGGAAAAUG		OtherRNA	ShortStack
ccm-b0.32r1-83052	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:667750-668393	.	56	0.68	GUUGGUUGUUGGCGGGC		OtherRNA	ShortStack
ccm-b0.32r1-83056	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:691833-692077	.	65	0.79	AAUUUUUACGGGUGACCUGAGCCU		OtherRNA	ShortStack
ccm-b0.32r1-83061	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:705202-705868	.	54	0.66	AGGACAACUUAGUUUUUGCAUGUG		OtherRNA	ShortStack
ccm-b0.32r1-83073	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:751927-752966	-	61	0.74	GAGACGUUAGAGGAGU		OtherRNA	ShortStack
ccm-b0.32r1-83117	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:970292-970309	+	63	0.77	CUUAUGGACCCGAACU		OtherRNA	ShortStack
ccm-b0.32r1-83122	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:998613-998763	.	77	0.94	ACCGACCAUCACGGACCGAACCGU		OtherRNA	ShortStack
ccm-b0.32r1-83124	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1014215-1014887	.	62	0.75	AAUUGAGCCUCGUAGAACCAAACU		OtherRNA	ShortStack
ccm-b0.32r1-83130	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1068471-1069190	.	189	2.30	AUUGAACCUUGAUGUCAUUGGAUG		OtherRNA	ShortStack
ccm-b0.32r1-83132	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1083932-1084099	.	90	1.10	CGAAUCUCUGUUCUCC		OtherRNA	ShortStack
ccm-b0.32r1-83171	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1182450-1182671	-	201	2.45	UUUUAUGUUGACAAGGCUAACUGACUGAUGCU		OtherRNA	ShortStack
ccm-b0.32r1-83172	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1182899-1182958	-	81	0.99	UUCUAUGUGGACAAUGUUAAUUGACUGAUGCU		OtherRNA	ShortStack
ccm-b0.32r1-83173	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1184625-1184752	.	60	0.73	AGACAUCUGAACCAUUAAGAGGCA		OtherRNA	ShortStack
ccm-b0.32r1-83188	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1240099-1240242	-	58	0.71	AAAAGGACUUUGAAAAGAA	miR476	OtherRNA	ShortStack
ccm-b0.32r1-83197	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1269832-1271332	+	239	2.91	AUAGAGAAAGUUUGAAGCCCCGGG		OtherRNA	ShortStack
ccm-b0.32r1-83204	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1292544-1292758	.	73	0.89	AAUGCGAUCAGGCGGAGCUAAUU		OtherRNA	ShortStack
ccm-b0.32r1-83216	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1345853-1346035	+	115	1.40	UCAGGUGACAAGUAGAGUGG		OtherRNA	ShortStack
ccm-b0.32r1-83219	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1354538-1354745	-	65	0.79	UCCGUCGUAGUCUAGA		OtherRNA	ShortStack
ccm-b0.32r1-83224	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1368382-1368623	-	81	0.99	AAAGUAGAAUGUGAUAUGUAGAUU		OtherRNA	ShortStack
ccm-b0.32r1-83236	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1404310-1404651	+	66	0.80	UCUGCCGUCACCGUCUUCUGCGCCCCCGUCAACGAGC		OtherRNA	ShortStack
ccm-b0.32r1-83237	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold109:1405303-1405785	+	70	0.85	CAUGACAUCGGCUGUAGUUUCA		OtherRNA	ShortStack
ccm-b0.32r1-21261	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:32710-32924	-	835	10.16	UUUCUGAUAGAGUAAAUGUAAUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.32r1-21262	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:33523-34018	-	76	0.93	AGGCUGUGAUGAUAAUCCUGUGAUUGUU		OtherRNA	ShortStack
ccm-b0.32r1-21263	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:35326-35562	-	726	8.83	UUUUCUGAUGGAAUAAAUGUAAUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.32r1-21264	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:37543-37984	-	1,130	13.75	UUUCUGAUAUAGUGAAUGUAAUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.32r1-21267	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:46013-47181	.	161	1.96	ACGUGAAAUGUGAACCUUCUUACA		OtherRNA	ShortStack
ccm-b0.32r1-21268	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:48588-49593	-	112	1.36	GCCGAUUGUUGAACAAAC		OtherRNA	ShortStack
ccm-b0.32r1-21269	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:50214-50727	-	59	0.72	GGAGGAAUUGUUGGGUUUCUUGUAGACCCGGAC		OtherRNA	ShortStack
ccm-b0.32r1-21294	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:101596-101938	.	59	0.72	AAUCUGAUCUGACCUGAACUAAUC		OtherRNA	ShortStack
ccm-b0.32r1-21297	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:109438-109870	.	79	0.96	CCUGAGGACGGUGUACUCUAACC		OtherRNA	ShortStack
ccm-b0.32r1-21371	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:359477-359911	.	60	0.73	AAGAUGUGAUGCGUAGAUUAUUAC		OtherRNA	ShortStack
ccm-b0.32r1-21384	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:469314-469920	.	101	1.23	GGGACGUUCAGGACAUCCGUG		OtherRNA	ShortStack
ccm-b0.32r1-21392	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:495700-496267	.	55	0.67	AGGGUCUGUAAUACUCCGUAUUGU		OtherRNA	ShortStack
ccm-b0.32r1-21394	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:499536-500297	+	125	1.52	AGAAGGUGUGGUACGACUCCGUG		OtherRNA	ShortStack
ccm-b0.32r1-21400	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:511503-511570	+	43	0.52	GAACGGUUUAUUUGUGACUCUAGC		OtherRNA	ShortStack
ccm-b0.32r1-21404	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:533965-534134	.	53	0.65	UUCUGUAUUUCUUAUUGU		OtherRNA	ShortStack
ccm-b0.32r1-21423	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:654216-655230	+	1,224	14.89	CCGGGUCGCCGGCGGGCC		OtherRNA	ShortStack
ccm-b0.32r1-21435	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:705181-706132	+	13,107	159.44	GCCUUUCCUGCGCAGCUUAGGUGGAAGGCGAAGACGGCC		OtherRNA	ShortStack
ccm-b0.32r1-21440	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:721038-721571	+	786	9.56	GGGGAUGUAGCUCAGAUA		OtherRNA	ShortStack
ccm-b0.32r1-21458	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:778200-778377	.	42	0.51	GCACGGACCAAGGAGC		OtherRNA	ShortStack
ccm-b0.32r1-21466	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:806928-807957	+	9,346	113.69	UACGCUGUUGAAUUCAAAAUAUUCACCAUCUUUCGGCUGAGAUU		OtherRNA	ShortStack
ccm-b0.32r1-21474	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:841916-842752	+	8,557	104.09	UUGGAUGAUGAUUUCUAAACAUGCACUACCAUCUGAUC		OtherRNA	ShortStack
ccm-b0.32r1-21504	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:935909-936826	.	131	1.59	AACGGUGAUCUCAUAGGACAAGUG		OtherRNA	ShortStack
ccm-b0.32r1-21529	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1007159-1007389	+	129	1.57	AUCUGCUGACUUAUAACUCAAAAGC		OtherRNA	ShortStack
ccm-b0.32r1-21536	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1021176-1021314	.	46	0.56	UGAGGUGAUGAAUGUC		OtherRNA	ShortStack
ccm-b0.32r1-21544	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1038697-1039611	-	62	0.75	UUCGUGCUGUGCGUGGGGGACGAC		OtherRNA	ShortStack
ccm-b0.32r1-21545	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1039759-1041129	-	81	0.99	CUGUGGACGCGAUCUCUUCUG		OtherRNA	ShortStack
ccm-b0.32r1-21553	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1075751-1076280	-	64	0.78	AACGGUGCAGAUUAAUUCUGAAAC		OtherRNA	ShortStack
ccm-b0.32r1-21570	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1112998-1113171	.	99	1.20	AACGAGAAGAUCUUAGGGGGACA		OtherRNA	ShortStack
ccm-b0.32r1-21588	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1144717-1144958	.	134	1.63	AUUGGAAUCCAGUGGUCACGGAAGC		OtherRNA	ShortStack
ccm-b0.32r1-21598	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1175550-1175805	.	72	0.88	AGCAGACCUCAGACUCCACUCGGC		OtherRNA	ShortStack
ccm-b0.32r1-21603	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1191438-1191906	.	88	1.07	GCCGUUGUGGUCUAGC		OtherRNA	ShortStack
ccm-b0.32r1-21646	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1315246-1315435	.	43	0.52	GAGUGUAGUGGAAGGU		OtherRNA	ShortStack
ccm-b0.32r1-21653	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1328144-1328275	+	27,191	330.77	UCCAUUGUCGUCCAGUGGUUAGGAUAUCUGGCU		OtherRNA	ShortStack
ccm-b0.32r1-21656	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1330765-1330932	+	1,808	21.99	AAGGUUGAAGACAAAACCCUUGGCUGCCUGAGCAA		OtherRNA	ShortStack
ccm-b0.32r1-21657	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1331036-1331851	+	20,292	246.84	UGCGAUGAUGAAGAAAUGGUUUAGACUAGAGUUUCUGAUCU		OtherRNA	ShortStack
ccm-b0.32r1-21661	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1337406-1337516	+	325	3.95	UUGCAGUGAUGAAGAAACAGUUUAGACUAGAGUUUCUGAUCU		OtherRNA	ShortStack
ccm-b0.32r1-21662	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1337649-1338327	+	978	11.90	AUCUAUGAUCUGAUUGUUGUUACACACACUGAAACC		OtherRNA	ShortStack
ccm-b0.32r1-21671	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1389384-1389598	.	80	0.97	AAAGUCGAAAGUGGACAAAGACA		OtherRNA	ShortStack
ccm-b0.32r1-21701	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1471548-1471814	-	66	0.80	AAAAAGACUAGUAGUUUCAUAUU		OtherRNA	ShortStack
ccm-b0.32r1-21716	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1514154-1514617	.	59	0.72	AGCACUCGGAGGACUUGUUUACUU		OtherRNA	ShortStack
ccm-b0.32r1-21745	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1613579-1614025	+	119	1.45	AGGACGUGAACGAGGCC		OtherRNA	ShortStack
ccm-b0.32r1-21746	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1614149-1614516	+	57	0.69	AAUACUUGUUUACAAUUCUGUGCA		OtherRNA	ShortStack
ccm-b0.32r1-21759	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1666524-1667581	.	82	1.00	AUCUUUCGAUUUUGACUUGACACG		OtherRNA	ShortStack
ccm-b0.32r1-21760	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1669045-1669329	-	168	2.04	CUAAGGGGCUGUUUGACAACUUCU		OtherRNA	ShortStack
ccm-b0.32r1-21761	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1669412-1670203	-	117	1.42	UGGCUGGAUUGAACCU		OtherRNA	ShortStack
ccm-b0.32r1-21762	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1670716-1670804	-	113	1.38	CUCCUACUCGGAUUGUUGCGGG		OtherRNA	ShortStack
ccm-b0.32r1-21763	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1670902-1672273	-	667	8.11	AGGAUCUGUACGAAUC		OtherRNA	ShortStack
ccm-b0.32r1-21764	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1672574-1672745	-	48	0.58	UUGCACAACUAAUUCUGGC		OtherRNA	ShortStack
ccm-b0.32r1-21773	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1685834-1686135	-	446	5.43	AUUGGACUACUGUAGCAAGACUAGU		OtherRNA	ShortStack
ccm-b0.32r1-21778	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1692290-1693558	+	217	2.64	UCCGAUCGGAAACUUCCAUUCCU		OtherRNA	ShortStack
ccm-b0.32r1-21779	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1694653-1694899	+	82	1.00	AGCCCUUGCGAAGGACGUGGACCU		OtherRNA	ShortStack
ccm-b0.32r1-21781	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1706988-1707404	.	55	0.67	GCGCGAGAGUUCUAUU		OtherRNA	ShortStack
ccm-b0.32r1-21783	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1709891-1710323	.	45	0.55	AAGACUGGAGUUAAACAUUGAAGU		OtherRNA	ShortStack
ccm-b0.32r1-21784	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1711253-1711471	.	57	0.69	AAUCAUCGUUCCAAAAGGUGGAAUC		OtherRNA	ShortStack
ccm-b0.32r1-21791	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1729870-1730055	+	1,636	19.90	GUGGCUGUAGUUUAGUGGUAAGAAUUCCACGUU		OtherRNA	ShortStack
ccm-b0.32r1-21795	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1741770-1742338	.	50	0.61	AUCUGACUUUGGCUUUUUUGACUA		OtherRNA	ShortStack
ccm-b0.32r1-21808	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1803103-1803370	+	50	0.61	AGGAUGUAAUGAGUAGAUUAUUGG		OtherRNA	ShortStack
ccm-b0.32r1-21828	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1860081-1860595	+	87	1.06	CGAGCGGGGUGGACGUG		OtherRNA	ShortStack
ccm-b0.32r1-21836	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1881070-1881577	.	101	1.23	AUUCCAAAAUAUCGGUUUGGCAUU		OtherRNA	ShortStack
ccm-b0.32r1-21841	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1919382-1921321	+	127	1.55	UUCAUGUGCACUUUGGAUCAUU		OtherRNA	ShortStack
ccm-b0.32r1-21850	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:1950635-1951016	.	59	0.72	AUGGUAUACAUGUUUGUCUGAAGU		OtherRNA	ShortStack
ccm-b0.32r1-21876	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2047151-2048228	-	84	1.02	AAAAAUGAAUGAAUGUAGACAUAC		OtherRNA	ShortStack
ccm-b0.32r1-21877	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2048308-2048722	-	45	0.55	CUGAUUGGUGGGAUCA		OtherRNA	ShortStack
ccm-b0.32r1-21878	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2053395-2054853	-	97	1.18	UCGAGAUCUUCGGCUUUAGCCUCAAAAGCUAC		OtherRNA	ShortStack
ccm-b0.32r1-21893	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2126042-2126390	-	43	0.52	AUGGAAGGAACUGGAAAAAACAGG		OtherRNA	ShortStack
ccm-b0.32r1-21899	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2161910-2162469	+	42	0.51	UGACCAGAAUGAUGACUUUGCCAAAA		OtherRNA	ShortStack
ccm-b0.32r1-21924	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2268266-2269025	+	57	0.69	CGGAGCUUUCGUGCUGAGCA		OtherRNA	ShortStack
ccm-b0.32r1-21933	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2307002-2307257	.	168	2.04	ACUCGAUCUGCGUGAGAAUCAUGGU		OtherRNA	ShortStack
ccm-b0.32r1-21938	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2320181-2320553	+	43	0.52	AUGCGUGUUGACUGUGGCACCUGAUCUCGUC		OtherRNA	ShortStack
ccm-b0.32r1-21952	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2386713-2387976	.	97	1.18	AAGUAGAAUCCGGUGGCCUCCUUC		OtherRNA	ShortStack
ccm-b0.32r1-21954	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2389997-2390256	.	76	0.93	AAGUGUCCGACUUUGUGAAUUAAU		OtherRNA	ShortStack
ccm-b0.32r1-21958	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2400519-2401066	.	146	1.78	UUUGUGGUAAGAACUACCAGGUACC		OtherRNA	ShortStack
ccm-b0.32r1-21986	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2488090-2488510	+	12,556	152.74	GAGUGGAGCCUGCGGCUUA		OtherRNA	ShortStack
ccm-b0.32r1-21991	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2506219-2506379	-	51	0.62	AGAGGAACCGUUGAUG		OtherRNA	ShortStack
ccm-b0.32r1-21993	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2509810-2510048	-	59	0.72	GGUAGGACGUGUCACA		OtherRNA	ShortStack
ccm-b0.32r1-21996	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2512019-2512620	-	55	0.67	AACUUCUGAUGUGGGAUACACUCU		OtherRNA	ShortStack
ccm-b0.32r1-22006	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2552076-2553204	.	10,055	122.31	CCAAGAUGAGUGCUCUCCC		OtherRNA	ShortStack
ccm-b0.32r1-22025	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2632378-2632782	.	86	1.05	AUAGUGAUUUUCGCAAUGUAGUACC		OtherRNA	ShortStack
ccm-b0.32r1-22043	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2671299-2672589	-	80	0.97	CUACUUGGAUUUCUGCA		OtherRNA	ShortStack
ccm-b0.32r1-22052	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2685549-2685965	-	55	0.67	AAAAGGUAGUUGAGAUGUGUAUGG		OtherRNA	ShortStack
ccm-b0.32r1-22094	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2806405-2806547	.	64	0.78	UUGAUUGUGGUAGGCA		OtherRNA	ShortStack
ccm-b0.32r1-22098	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2818876-2819407	.	74	0.90	UGGAGUACGGUAGGGGU		OtherRNA	ShortStack
ccm-b0.32r1-22104	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2832726-2832975	-	118	1.44	AACAAGAAGACAAUGAUGGAACCU		OtherRNA	ShortStack
ccm-b0.32r1-22105	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2833683-2834219	.	229	2.79	GGCAGGCGGCGGUCGACCGUUGGC		OtherRNA	ShortStack
ccm-b0.32r1-22130	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2927269-2927583	.	55	0.67	AGGACUUGACCCAGAACAGACAAU		OtherRNA	ShortStack
ccm-b0.32r1-22153	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:2998133-2998590	.	42	0.51	AGAGUGGAGGGCUUCUGAUGGAUG		OtherRNA	ShortStack
ccm-b0.32r1-22184	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3136513-3137191	.	103	1.25	ACCACGGCCCGGUGUGACCCGAGC		OtherRNA	ShortStack
ccm-b0.32r1-22187	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3156458-3157104	.	52	0.63	ACUUCUGGAUAAAGUGAUUUUCAC		OtherRNA	ShortStack
ccm-b0.32r1-22223	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3237878-3238022	+	121	1.47	AUGUGUGAUCUUGUUUGAUUUGUCA		OtherRNA	ShortStack
ccm-b0.32r1-22237	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3261097-3262684	.	88	1.07	GUGCUGCCGUCGGCCUCCGGC		OtherRNA	ShortStack
ccm-b0.32r1-22239	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3264673-3265014	.	44	0.54	ACUUGGAUUUGAAGAGCGAUCUUC		OtherRNA	ShortStack
ccm-b0.32r1-22242	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3275959-3276345	+	43	0.52	CGGAAGCGGGGCACUG		OtherRNA	ShortStack
ccm-b0.32r1-22243	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3276410-3276813	.	55	0.67	UUUGACUUUUGGAACUGG		OtherRNA	ShortStack
ccm-b0.32r1-22262	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3338965-3339354	.	45	0.55	AAUGUCUAGUGAGAGGAAUAAUGC		OtherRNA	ShortStack
ccm-b0.32r1-22274	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3382987-3383561	-	236	2.87	ACGACCUUACUUGAACAGGAUCUGUUCUAAUCUUUU		OtherRNA	ShortStack
ccm-b0.32r1-22275	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3384059-3385223	.	339	4.12	CCGGAGGACCGAGUGU		OtherRNA	ShortStack
ccm-b0.32r1-22310	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3485851-3486301	.	52	0.63	AGUGUGGUAGAUUGUUGAAAAAGC		OtherRNA	ShortStack
ccm-b0.32r1-22315	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3510719-3511090	.	112	1.36	AACAUAUCAGAAUUGAAGACUGAA		OtherRNA	ShortStack
ccm-b0.32r1-22324	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3539502-3539704	+	219	2.66	GAGAGACUGUUUUCAAAAGAAUA		OtherRNA	ShortStack
ccm-b0.32r1-22325	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold11:3544322-3544708	.	54	0.66	AACCUGUCAGAAUGCCAAGGAGCC		OtherRNA	ShortStack
ccm-b0.32r1-83254	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:10470-10616	-	121	1.47	AAAAAUGACUCUCGUCAA		OtherRNA	ShortStack
ccm-b0.32r1-83297	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:165969-166433	.	55	0.67	AAUAGGAAGAUGUGGUGGAGAUA		OtherRNA	ShortStack
ccm-b0.32r1-83298	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:175161-175530	.	82	1.00	AAUAUAAUUUGGGACGAAGAGAGU		OtherRNA	ShortStack
ccm-b0.32r1-83302	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:178347-178711	.	44	0.54	AAAUAGAUAGAAACUCAGGCCCCG		OtherRNA	ShortStack
ccm-b0.32r1-83307	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:184498-185112	-	98	1.19	UUGUUGCUUUGCUUCCU		OtherRNA	ShortStack
ccm-b0.32r1-83316	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:228356-228932	-	53	0.65	CAAACGAUCUUUGGAACCUGUGA		OtherRNA	ShortStack
ccm-b0.32r1-83339	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:316040-316568	.	179	2.18	AUAAGAGAUUGAGAUGUGAACGCC		OtherRNA	ShortStack
ccm-b0.32r1-83343	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:323562-323845	.	91	1.11	UCAGCACUUAAUGGUUCAGACUGC		OtherRNA	ShortStack
ccm-b0.32r1-83352	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:376244-376434	.	58	0.71	AGAGAGCUUUGGCGUAGCAAUAUC		OtherRNA	ShortStack
ccm-b0.32r1-83361	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:406484-406788	.	50	0.61	UGGCUAGAAAUUCAAC		OtherRNA	ShortStack
ccm-b0.32r1-83372	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:439068-439437	.	82	1.00	AAAUUAUCUUGAGUCGGACAUCGU		OtherRNA	ShortStack
ccm-b0.32r1-83381	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:464255-464594	.	43	0.52	AUUUUCGUGACUUCUGAAUAGU		OtherRNA	ShortStack
ccm-b0.32r1-83394	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:489895-490133	.	46	0.56	AUUUAUCUUUUCUCGGCUAACUAGC		OtherRNA	ShortStack
ccm-b0.32r1-83404	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:515093-515268	.	52	0.63	AAAGAAGAGACUUUUUUAGGGAUG		OtherRNA	ShortStack
ccm-b0.32r1-83405	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:515459-516015	.	129	1.57	AAAAGUGGACAAAAACUGGGGGACA		OtherRNA	ShortStack
ccm-b0.32r1-83416	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:549859-550205	.	53	0.65	AUUUGAAAUAAUGUGGGACUCAAG		OtherRNA	ShortStack
ccm-b0.32r1-83418	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:555463-555828	+	44	0.54	CGGACUGUCAAAUCUCUAGAGCGUGAUGUGGGA		OtherRNA	ShortStack
ccm-b0.32r1-83419	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:564466-565057	-	71	0.86	GGAGAUGAUGAAAAUAUUUCUGAUCCU		OtherRNA	ShortStack
ccm-b0.32r1-83441	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:653629-653957	.	66	0.80	AGUGGACGAAUAUAGCGGGACGUA		OtherRNA	ShortStack
ccm-b0.32r1-83443	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:658234-658852	.	43	0.52	GUGUAGAUUUUGACUGUCUGAUAAC		OtherRNA	ShortStack
ccm-b0.32r1-83484	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:810517-810951	.	101	1.23	AAGGACUUCAAAUCUAAUUCUGGU		OtherRNA	ShortStack
ccm-b0.32r1-83530	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:931176-931330	-	1,230	14.96	UGUGGUGAAGCCGAUGAUGAGA		OtherRNA	ShortStack
ccm-b0.32r1-83536	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:940444-940748	.	109	1.33	AUUGGGCCUCGAAGACAAUGAGCU		OtherRNA	ShortStack
ccm-b0.32r1-83540	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:982672-983315	-	17,206	209.30	GGGCUAUGGGGUGUUGGAACUUUGGGCU		OtherRNA	ShortStack
ccm-b0.32r1-83548	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1019494-1019661	.	43	0.52	ACGACUGGAACACCUGAAUCCCGU		OtherRNA	ShortStack
ccm-b0.32r1-83564	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1061085-1061288	.	45	0.55	UACCAGUAAGAGGUCUGAACCAUU		OtherRNA	ShortStack
ccm-b0.32r1-83574	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1107541-1107679	.	58	0.71	AUUGCAUUGUAGACCAUCACCU		OtherRNA	ShortStack
ccm-b0.32r1-83575	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1109963-1110448	-	102,885	1,251.55	AAAAGCUUGUCGGGCUUCCCAAUUUGGACCAUCACCUUUU		OtherRNA	ShortStack
ccm-b0.32r1-83579	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1139767-1140480	-	42	0.51	CAAUGAAAUCGAGUAGGA		OtherRNA	ShortStack
ccm-b0.32r1-83597	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1223878-1224384	.	70	0.85	AGACGAACACUUUGAUAAUCGAUG		OtherRNA	ShortStack
ccm-b0.32r1-83601	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1234658-1234872	+	42	0.51	AUAAUGACUAUGAUUGUGGGCUAGC		OtherRNA	ShortStack
ccm-b0.32r1-83608	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1244966-1245373	.	65	0.79	AUUGCAUCCCUUGUCAUUGUGAUC		OtherRNA	ShortStack
ccm-b0.32r1-83616	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1254272-1254471	.	54	0.66	AGGAUAUGAGAGCAUUAACAAUAGC		OtherRNA	ShortStack
ccm-b0.32r1-83617	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1254704-1255745	-	93	1.13	GCCAAAUUCGGGUUAGGACCC		OtherRNA	ShortStack
ccm-b0.32r1-83620	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1258539-1258759	.	48	0.58	AUAGAUCAAAGGUCACUUUUUGUU		OtherRNA	ShortStack
ccm-b0.32r1-83635	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1292324-1292719	.	150	1.83	UCCGGUCUAGCUCAGA		OtherRNA	ShortStack
ccm-b0.32r1-83641	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1311900-1312366	-	9,741	118.49	GACCCGUGCAGUGCUGUAGCUAAC		OtherRNA	ShortStack
ccm-b0.32r1-83642	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1313184-1313485	.	82	1.00	CCAACUGAUUGGACCAAGAUCUAU		OtherRNA	ShortStack
ccm-b0.32r1-83649	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1327232-1327421	+	44	0.54	ACACGGAGUUGAUGGAACUAAAAU		OtherRNA	ShortStack
ccm-b0.32r1-83650	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1327529-1327752	+	1,211	14.73	UGAAGGCAGCCAGAUGAGCAU		OtherRNA	ShortStack
ccm-b0.32r1-83675	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1398534-1399025	.	72	0.88	AUGAAAAUUGGGGUAGAAUUGACC		OtherRNA	ShortStack
ccm-b0.32r1-83685	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1447283-1447914	-	93	1.13	GUUGUAGCAUAUGAACAUUUACC		OtherRNA	ShortStack
ccm-b0.32r1-83695	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1468078-1468208	.	71	0.86	UUUGAAAAGAUCAUCCGACGGUAGC		OtherRNA	ShortStack
ccm-b0.32r1-83698	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1472950-1473052	-	203	2.47	GCGGGAGAUUGUGGGU		OtherRNA	ShortStack
ccm-b0.32r1-83712	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1512646-1513577	.	96	1.17	AAGGUCUGGACUGUAUAUAUCAUC		OtherRNA	ShortStack
ccm-b0.32r1-83714	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1515903-1516834	.	59	0.72	CAGCGGAAACGGCGGAAGACUGA		OtherRNA	ShortStack
ccm-b0.32r1-83716	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1527040-1528789	-	197	2.40	CUGCCCGAACCUGACGACCGUCACGGUCAAGAACU		OtherRNA	ShortStack
ccm-b0.32r1-83717	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1528867-1529169	-	46	0.56	UAAAGAUGAAAAGGACG	miR5298	OtherRNA	ShortStack
ccm-b0.32r1-83734	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1565359-1565534	.	68	0.83	AAGAUUAUCUGAGGACACUGUUCU		OtherRNA	ShortStack
ccm-b0.32r1-83746	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1606108-1606406	.	43	0.52	AAUUAAGGUCUAGAAGUACUUUCU		OtherRNA	ShortStack
ccm-b0.32r1-83747	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1606800-1607424	-	45	0.55	UACGUGUUCAAGUGGA		OtherRNA	ShortStack
ccm-b0.32r1-83748	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1607525-1608922	-	65	0.79	AACGCGGAUUACUCUUCAUCGUCC		OtherRNA	ShortStack
ccm-b0.32r1-83759	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1628115-1628319	.	62	0.75	AGGUGACGCCGAGUUUUGAACUUG		OtherRNA	ShortStack
ccm-b0.32r1-83767	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1656371-1657138	+	54	0.66	GAUUCGCCGGCGCUGUUCUGUUCGCGAUCAGCU		OtherRNA	ShortStack
ccm-b0.32r1-83768	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1662165-1662262	+	42	0.51	GUCGCUUUGGCCGAGUGGUUAAGG		OtherRNA	ShortStack
ccm-b0.32r1-83773	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1696205-1696908	.	64	0.78	AAGGGUACUCUGGAGAAUUUACAA		OtherRNA	ShortStack
ccm-b0.32r1-83810	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1784636-1784737	+	449	5.46	UUUUUCUGAUGAUCUUAUUUU		OtherRNA	ShortStack
ccm-b0.32r1-83815	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1802001-1802756	.	105	1.28	AAAGUCAUUAUGAUUGUUACUCCG		OtherRNA	ShortStack
ccm-b0.32r1-83838	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1856778-1857641	-	105	1.28	CAAACGUGGCGGAUCUUCUGUAAUUU		OtherRNA	ShortStack
ccm-b0.32r1-83839	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1857808-1858222	-	49	0.60	CUUCGUCCUGACAACAUUAAGAUGUUUGUGU		OtherRNA	ShortStack
ccm-b0.32r1-83845	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1886023-1886531	.	184	2.24	ACGUUGAACGCUGGCCGUAGAUA		OtherRNA	ShortStack
ccm-b0.32r1-83850	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1905807-1906537	.	48	0.58	UUGGUCUUUAGAUAAUCCGUUUGU		OtherRNA	ShortStack
ccm-b0.32r1-83852	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1908046-1908345	.	56	0.68	ACCAGACCCAGAACCCCAGAAGCC		OtherRNA	ShortStack
ccm-b0.32r1-83861	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1926708-1927316	.	59	0.72	GCGAAGCUCAGCCUCGCGAUCUCCGCC		OtherRNA	ShortStack
ccm-b0.32r1-83862	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:1928122-1928534	.	95	1.16	AUGAAGCUCUAACCUCAAACGAGU		OtherRNA	ShortStack
ccm-b0.32r1-83900	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:2016003-2018398	.	303	3.69	AGUGAGACUGCAACCGACUCGCCU		OtherRNA	ShortStack
ccm-b0.32r1-83901	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:2019282-2019475	.	45	0.55	AUAAAUAAAGACAUUUAGUAUCUG		OtherRNA	ShortStack
ccm-b0.32r1-83911	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold110:2041282-2041495	+	49	0.60	AUGGACAUUUAGUUGAAUAAUGACA		OtherRNA	ShortStack
ccm-b0.32r1-83934	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:58329-58712	.	47	0.57	AAAGAGAUAAACUCUGCACCUGAG		OtherRNA	ShortStack
ccm-b0.32r1-83946	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:88263-88884	.	65	0.79	UAAAGUCUAGGUAAAACAAGGUAAC		OtherRNA	ShortStack
ccm-b0.32r1-83948	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:93872-94713	-	58	0.71	GGUGGAAUCAAUACUGUU		OtherRNA	ShortStack
ccm-b0.32r1-83956	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:112910-113145	.	45	0.55	AGCUGUGAUUGUGCGGGACUUAGC		OtherRNA	ShortStack
ccm-b0.32r1-83978	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:196913-197341	.	58	0.71	GAUGUGAUACGUUUUGACUAAAGU		OtherRNA	ShortStack
ccm-b0.32r1-84008	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:276851-277063	+	74	0.90	GCGCAUCUAGUGUAGUGGUAUCAUA		OtherRNA	ShortStack
ccm-b0.32r1-84033	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:435885-436287	.	59	0.72	ACCGUCAGAUUGUAGAUUGCUACC		OtherRNA	ShortStack
ccm-b0.32r1-84040	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:464417-465396	.	55	0.67	AAAGAAUGCCGCUUUGGAACGCCU		OtherRNA	ShortStack
ccm-b0.32r1-84042	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:467923-468065	+	16,279	198.03	AGUGGAUGGCAAGAAGUGAGC		OtherRNA	ShortStack
ccm-b0.32r1-84078	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:594280-594676	-	2,703	32.88	UGAGAUCUGAGGGCGU		OtherRNA	ShortStack
ccm-b0.32r1-84091	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:622925-623985	-	140	1.70	GAUGUCGGCUCUCCCC		OtherRNA	ShortStack
ccm-b0.32r1-84095	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:653510-654288	.	71	0.86	AUGCUGGUCGUCUGAUUGUAAAGA		OtherRNA	ShortStack
ccm-b0.32r1-84096	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:659522-660068	-	84	1.02	AAUAAAGGACCAAUUAUAGAAUUU		OtherRNA	ShortStack
ccm-b0.32r1-84124	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:802079-802416	.	57	0.69	AGGAUCUAUGAGCUUGACAUCUUA		OtherRNA	ShortStack
ccm-b0.32r1-84133	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:842094-842340	.	48	0.58	GCUGGCUGUAGAUAGCC		OtherRNA	ShortStack
ccm-b0.32r1-84139	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:861831-862110	.	153	1.86	AUGUGGAUGAUUAUGUGGCAUGCC		OtherRNA	ShortStack
ccm-b0.32r1-84165	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:956067-956320	+	126	1.53	GGGACUGAGACACGGCC		OtherRNA	ShortStack
ccm-b0.32r1-84169	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:963951-964420	-	42	0.51	CGACCGACCUUGAAUAAAGA		OtherRNA	ShortStack
ccm-b0.32r1-84180	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1001455-1001882	+	57	0.69	AGACUAUUAGAAAAAUUGUAUGAU		OtherRNA	ShortStack
ccm-b0.32r1-84186	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1040545-1041400	.	105	1.28	AGUUUUGUAGUUGUCCUUGGUGAG		OtherRNA	ShortStack
ccm-b0.32r1-84214	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1147226-1147962	-	91	1.11	CGGACUCGAGCGGUGUGACAGAGGUUUCAUG		OtherRNA	ShortStack
ccm-b0.32r1-84215	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1148083-1148684	-	132	1.61	AUAAAUCGAUCUCGGGAAUGAUGG		OtherRNA	ShortStack
ccm-b0.32r1-84241	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1202342-1203003	.	71	0.86	AUGAACUUUUGAAACUUGAAGGACA		OtherRNA	ShortStack
ccm-b0.32r1-84269	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1296342-1297606	.	174	2.12	CGCGUGUGUGAAGAAG		OtherRNA	ShortStack
ccm-b0.32r1-84276	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1312068-1312669	.	44	0.54	UGCAAGGAAGAUCUGUCACUCUAC		OtherRNA	ShortStack
ccm-b0.32r1-84288	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1359222-1359483	.	161	1.96	ACUUGAAACCAGUAGACAAUGACC		OtherRNA	ShortStack
ccm-b0.32r1-84299	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1418484-1419154	+	87	1.06	AUGGACACAUUCUGUUUAUAUAAAGCA		OtherRNA	ShortStack
ccm-b0.32r1-84302	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1430455-1431077	+	2,324	28.27	AGACUAAUCGAACCGU		OtherRNA	ShortStack
ccm-b0.32r1-84310	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1470788-1471370	.	43	0.52	CCUGUGAAGUUGGAAUAGUGCUCU		OtherRNA	ShortStack
ccm-b0.32r1-84331	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1517398-1517603	-	154	1.87	UUGGCUGUUGGCUGUUUAUGUUAGC		OtherRNA	ShortStack
ccm-b0.32r1-84334	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1522563-1522652	-	336	4.09	GUCGAUAUGUCCGAGUGG		OtherRNA	ShortStack
ccm-b0.32r1-84336	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1526056-1526544	+	46	0.56	UGUUUGGGUUGUGUUAAUGCA		OtherRNA	ShortStack
ccm-b0.32r1-84344	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1568443-1568577	+	172	2.09	UAAUCUGAUUGAGAAAAGGCGAAUCUGAGC		OtherRNA	ShortStack
ccm-b0.32r1-84345	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1569560-1569735	+	125	1.52	AGGCUGUGAUGAUUACU		OtherRNA	ShortStack
ccm-b0.32r1-84346	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1570692-1570990	+	94	1.14	GAGAAAAGGCGAAUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.32r1-84347	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1572323-1572511	+	443	5.39	AGGCUGUGAUGAUUACU		OtherRNA	ShortStack
ccm-b0.32r1-84348	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1573188-1574016	+	62	0.75	AUGCCCGUGGAACAACUGGUCCAGUCACUGUG		OtherRNA	ShortStack
ccm-b0.32r1-84382	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1701658-1701958	+	46	0.56	CAUCGAGAUCGUCUACAGUGCGUGCGGU		OtherRNA	ShortStack
ccm-b0.32r1-84383	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1703169-1703755	+	104	1.27	CAGAGAAGAUCAAGAAGUUGAGAACCAAGGAGAUC		OtherRNA	ShortStack
ccm-b0.32r1-84438	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1883801-1885322	-	793	9.65	CCGGACAAGGAAAUCUUGA		OtherRNA	ShortStack
ccm-b0.32r1-84442	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1892855-1893581	+	93	1.13	UCAAAUCUUUAAUUUUGCUAUGACUAUCAC		OtherRNA	ShortStack
ccm-b0.32r1-84445	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1900006-1900208	-	95	1.16	CGAGAUCGUGUUGUUGAAGCA		OtherRNA	ShortStack
ccm-b0.32r1-84446	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1900400-1900538	-	186	2.26	AAUCCAAUUAGUGGCUGACAUGU		OtherRNA	ShortStack
ccm-b0.32r1-84454	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1919701-1919927	.	42	0.51	AGACAUGAGAGAAGUUUAUACUGG		OtherRNA	ShortStack
ccm-b0.32r1-84462	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1943752-1944217	+	43	0.52	CAAAGCUGUGUCUAACU		OtherRNA	ShortStack
ccm-b0.32r1-84463	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:1944290-1944948	+	47	0.57	GAUGUUGUUCUUGUCUCCGCUA		OtherRNA	ShortStack
ccm-b0.32r1-84488	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2004284-2004424	.	53	0.65	AUACAGAGAAGGAUAUUGUGUACU		OtherRNA	ShortStack
ccm-b0.32r1-84499	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2065671-2066129	.	44	0.54	AAGAUCCCCAACACAAAGUGAUUG		OtherRNA	ShortStack
ccm-b0.32r1-84511	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2124706-2124974	.	47	0.57	AUCGAAUCCGAUAGGUCCAGACCA		OtherRNA	ShortStack
ccm-b0.32r1-84514	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2142741-2142853	.	62	0.75	UGUGUCUGGAUUGAAUCU		OtherRNA	ShortStack
ccm-b0.32r1-84525	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2159285-2159691	+	72	0.88	AAUUGACGUGCGCUAGUAGUUGCU		OtherRNA	ShortStack
ccm-b0.32r1-84532	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2173022-2173222	-	44	0.54	AGCGGUGACGAUGAAGACGAUGAU		OtherRNA	ShortStack
ccm-b0.32r1-84571	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2301694-2302268	+	183	2.23	GCACGGAGUACGGUAGAAUACCUC		OtherRNA	ShortStack
ccm-b0.32r1-84587	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2342596-2342992	.	62	0.75	UGAAUUGUGGUCGGGACUGAGUG		OtherRNA	ShortStack
ccm-b0.32r1-84591	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2361334-2361526	+	162	1.97	UUGCCUCUGAAUAAGA		OtherRNA	ShortStack
ccm-b0.32r1-84592	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2361612-2361716	+	5,199	63.24	UCCAAUGAUGGUAAACCUUUGAGACCUGAAU		OtherRNA	ShortStack
ccm-b0.32r1-84593	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2361795-2361887	+	2,852	34.69	CGAAGUGAUGAUCGCACUGGGCUCUGAGA		OtherRNA	ShortStack
ccm-b0.32r1-84599	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2376655-2377224	+	157	1.91	UUUUGUUUGAUGGUAACU		OtherRNA	ShortStack
ccm-b0.32r1-84600	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2380059-2380666	.	47	0.57	AAAUGGUAUGUUUGUGAAGUUUGU		OtherRNA	ShortStack
ccm-b0.32r1-84615	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2423519-2423730	.	49	0.60	GAGAGAAAUUUUGAAGCCCCGGGA		OtherRNA	ShortStack
ccm-b0.32r1-84634	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2452233-2452383	+	1,548	18.83	AUCUCUCAGGCGUCGCCA		OtherRNA	ShortStack
ccm-b0.32r1-84642	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2475805-2476303	+	57	0.69	UCCAUCUGCUCCCGGUAGAGAUUCUUG		OtherRNA	ShortStack
ccm-b0.32r1-84643	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2479008-2479151	-	48	0.58	AUUUAAGUUUGACCGUGUGAAUAGU		OtherRNA	ShortStack
ccm-b0.32r1-84677	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2614822-2615356	.	108	1.31	AGAGGGCUCGUAGUACCUGCU		OtherRNA	ShortStack
ccm-b0.32r1-84690	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2649344-2649609	.	75	0.91	AACCAGUUAGGAUAAACUUAAGCC		OtherRNA	ShortStack
ccm-b0.32r1-84691	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2649786-2650070	-	59	0.72	CCAGUGCUCUGAAUGA		OtherRNA	ShortStack
ccm-b0.32r1-84706	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2718311-2718627	.	245	2.98	AUUUUUCAAAUCACUAGGUCAAGAGUUCAAAGCU		OtherRNA	ShortStack
ccm-b0.32r1-84720	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2760624-2761267	.	75	0.91	ACCGAACCCGAACCUGACAUGACC		OtherRNA	ShortStack
ccm-b0.32r1-84721	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2761836-2762609	.	85	1.03	ACCCUGUGAAUAGUGAACGAGAAC		OtherRNA	ShortStack
ccm-b0.32r1-84722	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2762702-2763226	.	121	1.47	AUCCGGAUGUAUGGUAUAAGU		OtherRNA	ShortStack
ccm-b0.32r1-84723	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2763581-2764085	.	92	1.12	AAUUGAAUCGUGUGUAACCCCUAC		OtherRNA	ShortStack
ccm-b0.32r1-84756	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2844254-2844842	.	50	0.61	AUCGGAGUGUCAUUGAAUGACAUC		OtherRNA	ShortStack
ccm-b0.32r1-84766	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2880113-2880144	-	371	4.51	CCGGUCGUCUCGUCCCU		OtherRNA	ShortStack
ccm-b0.32r1-84778	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2924591-2924688	+	554	6.74	GACGCUUUGGCCGAGUGGUUAAGG		OtherRNA	ShortStack
ccm-b0.32r1-84787	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2944010-2944404	-	42	0.51	AUCAUGAGGAACGUGAAGGGAC		OtherRNA	ShortStack
ccm-b0.32r1-84798	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:2983833-2984043	-	147	1.79	UUCCUUGACUGAUUCGAAC		OtherRNA	ShortStack
ccm-b0.32r1-84815	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:3054267-3054612	.	52	0.63	AUACUCCUUCCGUCCCACUGUGUU		OtherRNA	ShortStack
ccm-b0.32r1-84816	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:3058995-3059348	.	55	0.67	GAGGACAUGAUGAAUCUAGAGUCG		OtherRNA	ShortStack
ccm-b0.32r1-84822	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:3067471-3068044	.	46	0.56	AGCCAACGGGCUUUGGGCCGGCCU		OtherRNA	ShortStack
ccm-b0.32r1-84823	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:3068959-3069467	.	133	1.62	AGGUGACUCCGUUUGGACUGCAGA		OtherRNA	ShortStack
ccm-b0.32r1-84834	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:3131496-3131922	+	160	1.95	UUCAGAUACAAUGAAUAUUUCUCCAAGCAGCCUUGGACAUGA		OtherRNA	ShortStack
ccm-b0.32r1-84849	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:3159281-3159482	.	73	0.89	ACCACAAGCUGUUAUGAAUUUGCC		OtherRNA	ShortStack
ccm-b0.32r1-84892	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:3251394-3251693	+	64	0.78	ACGUGAUUAGUUAAGGACAAUUU		OtherRNA	ShortStack
ccm-b0.32r1-84907	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold111:3299852-3300018	.	50	0.61	CAAAAGGCCUAAUAGCUCUGGUACC		OtherRNA	ShortStack
ccm-b0.32r1-84917	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:24546-25375	-	141	1.72	ACCCUGACUGUGGACUCAAC		OtherRNA	ShortStack
ccm-b0.32r1-84918	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:26460-27072	-	113	1.38	UAAGACCAUAGACUUGAUUAAGG		OtherRNA	ShortStack
ccm-b0.32r1-84939	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:89688-90558	.	184	2.24	AGGAACAAUGAAUAAUGAGACGGU		OtherRNA	ShortStack
ccm-b0.32r1-84973	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:197041-197317	.	46	0.56	AUGGGUCAUCUGUAAACAACAACU		OtherRNA	ShortStack
ccm-b0.32r1-84999	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:255042-255680	.	70	0.85	AUUUGGACGAAAUCGCAGUGAAUC		OtherRNA	ShortStack
ccm-b0.32r1-85011	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:281695-281716	-	3,391	41.25	ACACCUGUUGGGACCU		OtherRNA	ShortStack
ccm-b0.32r1-85031	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:345350-346208	-	235	2.86	AACGAAUUGGAUGAUC		OtherRNA	ShortStack
ccm-b0.32r1-85034	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:352409-353467	-	57	0.69	CACCAACGUUUCCGGCCAA		OtherRNA	ShortStack
ccm-b0.32r1-85035	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:356160-356781	.	62	0.75	UGGCCGGUACGUAGAGACGUGUU		OtherRNA	ShortStack
ccm-b0.32r1-85062	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:469452-470612	+	70	0.85	UCGACGAGUGGCUCCCACUCUUGGACACC		OtherRNA	ShortStack
ccm-b0.32r1-85063	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:470702-472161	+	103	1.25	AUUUGAGUGAAUAAUUCUAACUGCAGA		OtherRNA	ShortStack
ccm-b0.32r1-85080	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:528558-529165	-	795	9.67	CGUUUGAUUCUGAUUUCCAGC		OtherRNA	ShortStack
ccm-b0.32r1-85081	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:529290-529584	.	113	1.38	ACUAGAACCAUUUGAGAACACACU		OtherRNA	ShortStack
ccm-b0.32r1-85149	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:735780-736419	.	119	1.45	CACCACGAGGCGCUGC		OtherRNA	ShortStack
ccm-b0.32r1-85150	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:736565-737418	.	258	3.14	UUUGUUUGAUGGUAACC		OtherRNA	ShortStack
ccm-b0.32r1-85154	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:748479-749036	.	181	2.20	AAGUAUUAUACAGAGUCUGAAUA		OtherRNA	ShortStack
ccm-b0.32r1-85158	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:760329-760498	.	47	0.57	UCUGAAUUAACGUAGUACUCAUUC		OtherRNA	ShortStack
ccm-b0.32r1-85167	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:819505-820103	-	73	0.89	UAUGGAUAUACCUCGUG		OtherRNA	ShortStack
ccm-b0.32r1-85169	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:822919-823638	.	75	0.91	AGAUGCUCUAACUAGGACUAAAGG		OtherRNA	ShortStack
ccm-b0.32r1-85171	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:828909-829502	.	154	1.87	CGGAUUCGAACUUGAGCGGAGG		OtherRNA	ShortStack
ccm-b0.32r1-85197	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold112a:969040-969159	-	46	0.56	ACCGGAAGAAACUGGAAGGAACUG		OtherRNA	ShortStack
ccm-b0.32r1-85262	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:26905-27581	+	113	1.38	CAGGAGAGGCUACUGGGGAAACA		OtherRNA	ShortStack
ccm-b0.32r1-85274	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:45114-45492	.	95	1.16	CCGUCGAUUUGAAAAAU		OtherRNA	ShortStack
ccm-b0.32r1-85299	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:113606-114225	-	497	6.05	UUAUGAAAGACGAACG		OtherRNA	ShortStack
ccm-b0.32r1-85306	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:138147-138816	.	89	1.08	GGCUGUCGGUGGACUG		OtherRNA	ShortStack
ccm-b0.32r1-85315	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:152505-152775	-	1,642	19.97	GGGGAUGUAGCUCAGA		OtherRNA	ShortStack
ccm-b0.32r1-85344	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:223463-224306	+	223	2.71	AAACUGGACGAGAAUACACUGAGA		OtherRNA	ShortStack
ccm-b0.32r1-85370	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:336466-337582	+	93	1.13	GUGGACCGACGCGGAC		OtherRNA	ShortStack
ccm-b0.32r1-85377	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:353412-353659	.	45	0.55	AUUUAGAUCGAACCACAGUAAAAG		OtherRNA	ShortStack
ccm-b0.32r1-85385	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:360227-360564	.	97	1.18	AAGGAGGUAGGGGUGU		OtherRNA	ShortStack
ccm-b0.32r1-85389	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:366016-366365	+	47	0.57	AUGUAUUGUUACCGGCAGCGAAGAUUGUUGACUGU		OtherRNA	ShortStack
ccm-b0.32r1-85395	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:388349-389538	.	144	1.75	AUCGUCGCCGGAGGUAUUAUU		OtherRNA	ShortStack
ccm-b0.32r1-85401	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:404387-404659	.	90	1.10	AUUAGAAUAUUGUUGACAUAGAAG		OtherRNA	ShortStack
ccm-b0.32r1-85419	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:465168-465371	+	107	1.30	UUUCGGAAUAACGUUAGAGAUUAGC		OtherRNA	ShortStack
ccm-b0.32r1-85433	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:513399-513661	-	75	0.91	GCCGCUGUAGCACAAC		OtherRNA	ShortStack
ccm-b0.32r1-85434	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:514189-514870	-	140	1.70	ACCCCAGUCGUCGAUCGGUC		OtherRNA	ShortStack
ccm-b0.32r1-85435	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:515622-515884	.	56	0.68	AUUCUUUAGGACUUGAACUCUUAA		OtherRNA	ShortStack
ccm-b0.32r1-85446	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:540440-541008	+	50	0.61	GUGACUUGAGCUACUAGAGCUUA		OtherRNA	ShortStack
ccm-b0.32r1-85447	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:545399-545726	-	365	4.44	GCUGGAAUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.32r1-85451	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:554589-554998	.	87	1.06	AUCCGGCUGUAUCAUACUCCCUCC		OtherRNA	ShortStack
ccm-b0.32r1-85471	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:605467-605753	.	55	0.67	ACCCUGAGAGAAUAGUCGGAGAAA		OtherRNA	ShortStack
ccm-b0.32r1-85493	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:680842-681868	-	49	0.60	GACGAUCUUGCUGUUGA		OtherRNA	ShortStack
ccm-b0.32r1-85494	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:683238-683658	-	48	0.58	AUCUGAAGAGCCUGGG		OtherRNA	ShortStack
ccm-b0.32r1-85495	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:685425-685554	-	355	4.32	AAGAUCUCUACUGACAUGG		OtherRNA	ShortStack
ccm-b0.32r1-85496	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:686127-686339	-	88	1.07	UUAUUGCUCUUAAAGAUCCUGCAGACAUGG		OtherRNA	ShortStack
ccm-b0.32r1-85528	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:770974-771394	-	45	0.55	UCAACUGUUCUUAGACUCCCAGG		OtherRNA	ShortStack
ccm-b0.32r1-85556	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:875998-876191	+	42	0.51	UGCGAUGAUUACAAAUUUGUCCUCCUGAACUGAUU		OtherRNA	ShortStack
ccm-b0.32r1-85573	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:1017859-1018543	.	90	1.10	UUUCCCAAUGUAGAACUUAAAUU		OtherRNA	ShortStack
ccm-b0.32r1-85580	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:1040372-1041385	+	61	0.74	AGGUCGUGUCGGGCGAA		OtherRNA	ShortStack
ccm-b0.32r1-85581	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:1043287-1043970	+	46	0.56	AAUGGGACAUGUGAGCCAGUGAGC		OtherRNA	ShortStack
ccm-b0.32r1-85588	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold113:1069155-1069665	.	262	3.19	AUGGAAGUAGAUGAGU		OtherRNA	ShortStack
ccm-b0.32r1-132681	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1137:50-1047	-	375,782	4,571.20	GAUAACCGUAGUAAUUCUAGAGCUAA		OtherRNA	ShortStack
ccm-b0.32r1-132682	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1137:4314-4892	-	160,137	1,947.99	GUGCGCUGGAUUAUGACU		OtherRNA	ShortStack
ccm-b0.32r1-85598	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:33593-34578	-	689	8.38	AUUGUUGGUCUUCAACGAGGAAUUCCUAGUAAGCGUA		OtherRNA	ShortStack
ccm-b0.32r1-85605	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:46789-47486	.	136	1.65	AAUUGCGUAAGCGGUGUGGGAUUA		OtherRNA	ShortStack
ccm-b0.32r1-85649	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:196150-197076	.	111	1.35	AUUGAGAACUAAAUAUGAAAAACA		OtherRNA	ShortStack
ccm-b0.32r1-85650	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:203915-205438	-	118	1.44	UGGGGCACGUGGAAUCA		OtherRNA	ShortStack
ccm-b0.32r1-85672	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:259415-260328	.	329	4.00	UCCGACUUUGUGAAAUA		OtherRNA	ShortStack
ccm-b0.32r1-85724	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:432394-432567	+	1,540	18.73	UGGCUACAUGUACCAAGAUUGGGGCUA		OtherRNA	ShortStack
ccm-b0.32r1-85727	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:440390-440530	.	44	0.54	AGAACCGGAGUCGAACUGAACAAG		OtherRNA	ShortStack
ccm-b0.32r1-85748	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:523873-524079	.	51	0.62	UUUGGGAAUAACGUUAGAGAUUAGU		OtherRNA	ShortStack
ccm-b0.32r1-85754	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:536186-536625	.	159	1.93	UGGCGGUGCGUUUCGAACUCGUAAC		OtherRNA	ShortStack
ccm-b0.32r1-85780	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:611310-611673	.	207	2.52	ACACUGAACUGGACCUUAGAA		OtherRNA	ShortStack
ccm-b0.32r1-85781	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:611806-612280	.	445	5.41	AGGUUCUAUAGGAACUGGACGAUC		OtherRNA	ShortStack
ccm-b0.32r1-85782	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:612385-612673	.	513	6.24	AGAGCAUCGCAUUUGUAAUG		OtherRNA	ShortStack
ccm-b0.32r1-85800	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:665469-665618	+	65	0.79	AUUGGGUGCAGAGGAAAC		OtherRNA	ShortStack
ccm-b0.32r1-85801	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:665728-667182	+	495	6.02	AGAGUAUCCCGCAUCGGAAAAAUG		OtherRNA	ShortStack
ccm-b0.32r1-85807	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:687512-687837	.	51	0.62	GAACUUUAAUUGUAGAUUGGUAGU		OtherRNA	ShortStack
ccm-b0.32r1-85823	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:737750-738438	.	45	0.55	AUGGUGUUGGCUAAUAAUCUUUUG		OtherRNA	ShortStack
ccm-b0.32r1-85828	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:747115-747715	.	149	1.81	CCUGUAAAUAGUGAACAUGCAUU		OtherRNA	ShortStack
ccm-b0.32r1-85844	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:835659-836181	-	650	7.91	UGGAAGGGCUAGAAUUCC		OtherRNA	ShortStack
ccm-b0.32r1-85850	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:849420-849627	-	196	2.38	ACGGGCACCUGUAGGGAUUAGUGU		OtherRNA	ShortStack
ccm-b0.32r1-85856	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:867516-867589	+	1,070	13.02	GCGUCUGUAGUCCAAU		OtherRNA	ShortStack
ccm-b0.32r1-85875	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:927439-928276	+	304	3.70	AUACCCGGUUUCCGCUCUGAACGC		OtherRNA	ShortStack
ccm-b0.32r1-85876	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:928987-929361	+	86	1.05	AUAGGGCUGUGGCAAGGAG		OtherRNA	ShortStack
ccm-b0.32r1-85877	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:930345-931311	+	172	2.09	UUCCGGCAGAACCACUGAUGUUCU		OtherRNA	ShortStack
ccm-b0.32r1-85894	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:986802-987627	+	316	3.84	AGAUAAACACUGGCGGCACCUGGU		OtherRNA	ShortStack
ccm-b0.32r1-85903	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold114:1029279-1029683	-	76	0.93	UCGCGUCGGGUUCACCA	miR5077	OtherRNA	ShortStack
ccm-b0.32r1-132685	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1140:4061-4177	+	225	2.74	UACCUAGUUGAUCCUGC		OtherRNA	ShortStack
ccm-b0.32r1-132686	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1140:4266-4339	+	64	0.78	UAAAAGGUCAAUGCGGGUUUC		OtherRNA	ShortStack
ccm-b0.32r1-132687	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1140:5150-5339	+	1,227	14.93	GGAGUAUGGUCGCAAGGCUGAAACU		OtherRNA	ShortStack
ccm-b0.32r1-85927	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:57572-58363	.	47	0.57	AUAAGAUCGAUCUUGUGUUGUAUG		OtherRNA	ShortStack
ccm-b0.32r1-85938	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:111650-111958	.	62	0.75	AAUCAUGAGUGAACACUGACUUGG		OtherRNA	ShortStack
ccm-b0.32r1-85974	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:349336-350259	.	86	1.05	CACUCUUGGACCAAGGG		OtherRNA	ShortStack
ccm-b0.32r1-85975	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:350348-350625	+	79	0.96	AAAAUGCCGGUGCUGCACUCAUUAGAGAGGUUGCC		OtherRNA	ShortStack
ccm-b0.32r1-85976	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:351036-351457	+	42	0.51	AAAUGAUCAAACUUGGUCUGUUGAGU		OtherRNA	ShortStack
ccm-b0.32r1-85977	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:351860-352612	.	54	0.66	CAGGAUAUGGAUGAGAAAAUCACA		OtherRNA	ShortStack
ccm-b0.32r1-86024	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:584495-584944	.	74	0.90	GCCGCUGUAGCACUUU		OtherRNA	ShortStack
ccm-b0.32r1-86038	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:670254-670424	.	55	0.67	AGGGUUUACCGGGCUGUUAGGAGC		OtherRNA	ShortStack
ccm-b0.32r1-86057	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:727643-727827	.	139	1.69	GCGGACCGCUCGAGCUGU		OtherRNA	ShortStack
ccm-b0.32r1-86060	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:738082-738328	.	59	0.72	UGUGAUCUGAUCUCUAAUAAGAAU		OtherRNA	ShortStack
ccm-b0.32r1-86074	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:781517-782580	.	68	0.83	CGAGUCAACGGGCGAGU		OtherRNA	ShortStack
ccm-b0.32r1-86114	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:966968-967324	.	91	1.11	AAGUGAGGAUUGCUAUGAUACAAG		OtherRNA	ShortStack
ccm-b0.32r1-86134	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold115:1021506-1021916	.	862	10.49	CUAGAGAAUUCGUUGAACUAAA		OtherRNA	ShortStack
ccm-b0.32r1-86154	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:4371-4540	+	73	0.89	UUGGAAAGAACUUCGUGUCAAC		OtherRNA	ShortStack
ccm-b0.32r1-86184	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:83960-84119	.	42	0.51	AGGACUUGCAUUACCAAACAUGGU		OtherRNA	ShortStack
ccm-b0.32r1-86193	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:140101-140312	-	63	0.77	CGGCUGUCGGUGGACUG		OtherRNA	ShortStack
ccm-b0.32r1-86200	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:166463-166762	+	42	0.51	AAGAUAAAAUGGAUUAGAGAAGUG		OtherRNA	ShortStack
ccm-b0.32r1-86214	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:204000-204266	-	58	0.71	GAAGAUGAAGGACACCGAUUCUGAAGAGG		OtherRNA	ShortStack
ccm-b0.32r1-86216	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:206973-207145	+	49	0.60	ACGGAAUGCAGUUUUUUCUAAACG		OtherRNA	ShortStack
ccm-b0.32r1-86233	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:253207-253539	+	77	0.94	CCGAAUCUGGUGAACC		OtherRNA	ShortStack
ccm-b0.32r1-86234	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:254636-254758	+	42	0.51	AUUCCAGACGAGCUUGGUAACUUG		OtherRNA	ShortStack
ccm-b0.32r1-86235	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:255896-256163	+	88	1.07	UUGUUGAUGUAAGAAGAUCUGUAUCCA		OtherRNA	ShortStack
ccm-b0.32r1-86263	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:353915-354269	-	2,291	27.87	UCCGUUGUAGUCUAGUUGGUCAGGAUACUC		OtherRNA	ShortStack
ccm-b0.32r1-86266	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:355818-355978	-	6,290	76.52	UCCGUUGUAGUCUAGUUGGUCAGGAUACUC		OtherRNA	ShortStack
ccm-b0.32r1-86276	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:421572-422526	-	48	0.58	GAUCGGAGUUGGCUAAUUC		OtherRNA	ShortStack
ccm-b0.32r1-86294	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:463474-463855	+	118	1.44	UGAUGAGAUCGGCGGU		OtherRNA	ShortStack
ccm-b0.32r1-86295	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:464016-465369	.	216	2.63	UACACGGAAUUGGAAUUGAAUUC		OtherRNA	ShortStack
ccm-b0.32r1-86335	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:639990-641128	.	161	1.96	UGGUUUAGUACUACUGGAACGUGU		OtherRNA	ShortStack
ccm-b0.32r1-86355	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:709796-710085	-	95	1.16	GCGGCGACGUGGGUGGG		OtherRNA	ShortStack
ccm-b0.32r1-86361	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:734429-735304	-	61	0.74	AAGACGUGACUGAGUUAG		OtherRNA	ShortStack
ccm-b0.32r1-86368	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:761924-762171	.	59	0.72	AACUGGACAAAUACUCAGGAACGG		OtherRNA	ShortStack
ccm-b0.32r1-86395	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:854357-855781	+	93	1.13	AGAUGGACCCGAGCUUUGAAACGC		OtherRNA	ShortStack
ccm-b0.32r1-86402	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:882253-883816	-	332	4.04	CUUGAGGUCGAGAGCUC		OtherRNA	ShortStack
ccm-b0.32r1-86407	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold116:894071-894263	.	119	1.45	UUUGAGACACUAACUGCCGGGUACC		OtherRNA	ShortStack
ccm-b0.32r1-132705	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold1175:3829-4424	.	46	0.56	AGAAUUUAGAACGAUAUUUGCUGG		OtherRNA	ShortStack
ccm-b0.32r1-86466	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:17678-18213	-	52	0.63	UGGUUUAGACUAGUACUGUGUG		OtherRNA	ShortStack
ccm-b0.32r1-86471	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:36865-37014	.	43	0.52	ACGAACUAAAUACGGAAUAUACUC		OtherRNA	ShortStack
ccm-b0.32r1-86478	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:63998-64055	+	46	0.56	AUAUUUACUUCUGAGCUC		OtherRNA	ShortStack
ccm-b0.32r1-86481	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:87331-87647	.	50	0.61	ACAUAAAAUGUCUGUGCAAUUCCA		OtherRNA	ShortStack
ccm-b0.32r1-86496	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:128680-129090	+	53	0.65	AGGACAUAUUCAGAACCCUGAGAG		OtherRNA	ShortStack
ccm-b0.32r1-86497	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:129460-129806	.	49	0.60	AUGGUUUGGUUUGUGGGUGUGGGUUG		OtherRNA	ShortStack
ccm-b0.32r1-86535	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:260694-261028	.	48	0.58	GAUUACGGUGGCGGCCA		OtherRNA	ShortStack
ccm-b0.32r1-86537	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:265545-265707	+	167	2.03	UGUUGCUUUGACUCCU		OtherRNA	ShortStack
ccm-b0.32r1-86541	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:277786-277974	.	332	4.04	ACCACGUCUGUACUGUAAAUAUGC		OtherRNA	ShortStack
ccm-b0.32r1-86542	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:293841-294151	+	48	0.58	ACGUAAUACUCACUCUGACAAAGG		OtherRNA	ShortStack
ccm-b0.32r1-86594	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:430717-430938	+	46	0.56	UGACGACCAGAUCUCUGAGU		OtherRNA	ShortStack
ccm-b0.32r1-86595	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:431654-432226	+	112	1.36	AGCUGGGAACUGUGAUG		OtherRNA	ShortStack
ccm-b0.32r1-86600	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:451203-451745	+	206	2.51	CGACGAUCUUCAACGGUACUUUGG		OtherRNA	ShortStack
ccm-b0.32r1-86613	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:471740-472324	.	53	0.65	CCAGAUGGGGACUCCGGAAGCU		OtherRNA	ShortStack
ccm-b0.32r1-86654	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:613061-613523	+	43	0.52	ACAAGGAUAGUCCGGCUGCUAAGUUCCUCCU		OtherRNA	ShortStack
ccm-b0.32r1-86726	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:845379-846351	.	52	0.63	CGACGUGUCAGAACUUGGUUC		OtherRNA	ShortStack
ccm-b0.32r1-86739	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:881838-882045	.	47	0.57	AACAGUCGCGGGAACC		OtherRNA	ShortStack
ccm-b0.32r1-86746	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:919384-920530	-	9,439	114.82	UCAUUGAUUGAAAGAGCUGUUUUUGUUCUCUGAGCCU		OtherRNA	ShortStack
ccm-b0.32r1-86747	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117a:920615-920724	-	164	2.00	AUAAUGUUCUGAGACUU		OtherRNA	ShortStack
ccm-b0.32r1-86756	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:35411-35860	-	1,869	22.74	CCGGCUUUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.32r1-86761	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:41031-41225	.	47	0.57	UGCGGAAAGAUCAUUG		OtherRNA	ShortStack
ccm-b0.32r1-86789	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:128489-128600	+	2,827	34.39	GGUUCCAUGGUCUAGUGGUCAGGACAUUGGACUC		OtherRNA	ShortStack
ccm-b0.32r1-86792	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:134954-134992	-	112	1.36	AUCAUUAAUUGUUUACACUUGUAG		OtherRNA	ShortStack
ccm-b0.32r1-86796	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:145036-145628	+	55	0.67	AAGUACCGGAGGGAGAAGGGGCUGC		OtherRNA	ShortStack
ccm-b0.32r1-86798	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:147129-148043	.	201	2.45	GCCCGUCUAGCUCAGU		OtherRNA	ShortStack
ccm-b0.32r1-86816	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:208255-209150	.	176	2.14	CCGGCUGUUUCUGUUAGA		OtherRNA	ShortStack
ccm-b0.32r1-86820	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:228766-229643	+	163	1.98	UCCGUUGUAGCCUAGA		OtherRNA	ShortStack
ccm-b0.32r1-86823	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:241388-241938	.	112	1.36	AAAGGGACUAGACUAAGAAGAUCA		OtherRNA	ShortStack
ccm-b0.32r1-86856	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:368243-369090	-	123	1.50	AAUUUGUGGAUCGGAGUGUGUG		OtherRNA	ShortStack
ccm-b0.32r1-86867	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:425427-425658	+	49	0.60	UUCUUUAACUUCAGAACAG		OtherRNA	ShortStack
ccm-b0.32r1-86869	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:433981-434393	.	43	0.52	UUUCCAAUGUAGGACUUUUGGUA		OtherRNA	ShortStack
ccm-b0.32r1-86883	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:482201-482563	-	57	0.69	UGUUCGAGACACUCUGGCGCCCUGGCC		OtherRNA	ShortStack
ccm-b0.32r1-86885	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:485739-486567	.	88	1.07	AGAGAAGGCUGACAGUCGGUUGUC		OtherRNA	ShortStack
ccm-b0.32r1-86910	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:592658-593259	-	44	0.54	GGAAGACGGUGGCUGAGA		OtherRNA	ShortStack
ccm-b0.32r1-86917	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:611051-611252	+	58	0.71	GGUCUGAACUGGCCGGUCCGGUU		OtherRNA	ShortStack
ccm-b0.32r1-86922	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:631024-631514	.	73	0.89	AACUUGUAUGUGUUGAAGGAGUGGAAAGCUUUGUCUUU		OtherRNA	ShortStack
ccm-b0.32r1-86949	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:703658-704581	.	200	2.43	AAUACAACUGAAAAAGAACCU		OtherRNA	ShortStack
ccm-b0.32r1-86973	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:774853-776141	.	141	1.72	GAGGACAUUGUCAUGC		OtherRNA	ShortStack
ccm-b0.32r1-86986	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:811111-812255	+	130	1.58	CAGGGAAAAGAAUAUCGAU		OtherRNA	ShortStack
ccm-b0.32r1-86987	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:812520-812822	+	75	0.91	ACAGGAUUGUAGCAGGGAUG		OtherRNA	ShortStack
ccm-b0.32r1-86994	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:840343-840579	.	209	2.54	GAUUUAACUGGGUUGUUGCUGUU		OtherRNA	ShortStack
ccm-b0.32r1-87013	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:884684-884906	+	67	0.82	UAUUAGGAAAAAAGAAUGACGUG		OtherRNA	ShortStack
ccm-b0.32r1-87022	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:914331-914600	.	75	0.91	AGGAAGAAGGACCAAACUACGAGU		OtherRNA	ShortStack
ccm-b0.32r1-87052	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:992986-993468	.	49	0.60	AUUAUAAAAUCUAAUAGACUAUGG		OtherRNA	ShortStack
ccm-b0.32r1-87072	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1040587-1040754	.	54	0.66	AUGGUUCGGUAUUGGUUUUGGUAC		OtherRNA	ShortStack
ccm-b0.32r1-87078	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1053339-1054324	.	740	9.00	AUAACCGAACCGUAUCUGAACUGA		OtherRNA	ShortStack
ccm-b0.32r1-87079	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1060792-1061283	.	87	1.06	AAUUGCUGGAAAAGUAGAUGUG		OtherRNA	ShortStack
ccm-b0.32r1-87088	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1081626-1081926	+	56	0.68	CUCUAAUCUCGCCGGCGGCAGGU		OtherRNA	ShortStack
ccm-b0.32r1-87125	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1175563-1176169	+	104	1.27	GUUGGGUGGAUAAAAAUGGCUC		OtherRNA	ShortStack
ccm-b0.32r1-87129	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1186149-1186476	+	93	1.13	CGAGGACCUCCGGAACAAGAGCGAUCUGCUU		OtherRNA	ShortStack
ccm-b0.32r1-87130	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1186589-1187148	+	137	1.67	UCUCUCGUAGGAUUCUACAGC		OtherRNA	ShortStack
ccm-b0.32r1-87153	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1240478-1240952	.	44	0.54	AGUAGAACAGCACGUCGCGGC		OtherRNA	ShortStack
ccm-b0.32r1-87206	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1368506-1368829	+	53	0.65	UUGGAUUGUUUGGUGCGGGCGGGUU		OtherRNA	ShortStack
ccm-b0.32r1-87211	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1380594-1381143	+	101	1.23	CGAACGAUGGUUGCUUGAACU		OtherRNA	ShortStack
ccm-b0.32r1-87233	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1447455-1447675	+	110	1.34	AUUUGCAAGUUUGGCUUUUCUGUUACAUAU		OtherRNA	ShortStack
ccm-b0.32r1-87238	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1476767-1476946	-	44	0.54	AGAGUUUGGACUUGAUUAAGU		OtherRNA	ShortStack
ccm-b0.32r1-87259	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1521337-1521559	-	207	2.52	UAAGAUGUGAUAUGUAGAUUAUC		OtherRNA	ShortStack
ccm-b0.32r1-87264	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1535953-1536507	.	60	0.73	AAUGUCUGUAUUCUGCGAAAGAGC		OtherRNA	ShortStack
ccm-b0.32r1-87269	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1575865-1575944	+	7,303	88.84	UCCAUUGUCGUCCAGCGGUUAGGAUACUUGGCU		OtherRNA	ShortStack
ccm-b0.32r1-87284	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold117b:1624210-1624895	.	54	0.66	AACAGAAUUUUGACCUUGUUCGGG		OtherRNA	ShortStack
ccm-b0.32r1-87319	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:97474-97681	+	56	0.68	UCCGUCGUAGUCUAGA		OtherRNA	ShortStack
ccm-b0.32r1-87339	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:125702-125997	.	58	0.71	AUGCUAGUGACUCUAUUACAAGAU		OtherRNA	ShortStack
ccm-b0.32r1-87340	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:126982-127508	.	51	0.62	ACCGCCACCAAGAACUCAUGAUCU		OtherRNA	ShortStack
ccm-b0.32r1-87344	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:135824-136087	.	124	1.51	AUGGUGCUCUGUUCGCAAAAAUGA		OtherRNA	ShortStack
ccm-b0.32r1-87345	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:136246-136750	.	83	1.01	AGUAAGAUGUGAUAGGUAGAUUAUC		OtherRNA	ShortStack
ccm-b0.32r1-87371	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:230997-231206	-	53	0.65	AUUCUUGAAUAGUUGGAUGUGAUG		OtherRNA	ShortStack
ccm-b0.32r1-87415	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:384094-384585	.	60	0.73	AGAACUUCAAACUCAGCGACGAGU		OtherRNA	ShortStack
ccm-b0.32r1-87422	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:419213-420352	.	90	1.10	AAAAUGGAUCUUUAAACUGUCUGC		OtherRNA	ShortStack
ccm-b0.32r1-87425	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:435119-435502	.	43	0.52	AUUGUACGAGAGGAUGUGUAACGC		OtherRNA	ShortStack
ccm-b0.32r1-87440	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:501104-501310	.	48	0.58	ACCGAGGUAGCGGGUUCUGAAACA		OtherRNA	ShortStack
ccm-b0.32r1-87446	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:505785-505876	.	50	0.61	UUAGGACUUGAACUCUUCACUUC		OtherRNA	ShortStack
ccm-b0.32r1-87459	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:536173-536514	+	60	0.73	AAAAACUAGCUGUGGACGUGAAGCCUGG		OtherRNA	ShortStack
ccm-b0.32r1-87460	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:536801-537777	+	80	0.97	UCGGUGAUUAAGAUCUGCAUUGUGAAGU		OtherRNA	ShortStack
ccm-b0.32r1-87468	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:551696-551993	.	53	0.65	AUCGAACUAGAGUCGAGAAUGCUC		OtherRNA	ShortStack
ccm-b0.32r1-87482	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:594513-595019	.	62	0.75	AGUAUGGCCUUGUAUGAUUUUACA		OtherRNA	ShortStack
ccm-b0.32r1-87495	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:636732-637520	.	43	0.52	GUCGACAGCACCCGUCCUCCCUGC		OtherRNA	ShortStack
ccm-b0.32r1-87497	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:656939-657355	.	103	1.25	CCGGCAGGUCGGACCA		OtherRNA	ShortStack
ccm-b0.32r1-87521	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:755423-755845	.	58	0.71	AAAUUGACGUGCGUUGGUAGCUGC		OtherRNA	ShortStack
ccm-b0.32r1-87522	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:756396-757111	.	105	1.28	CGAGCUGGGCAUGUUGAACUCCC		OtherRNA	ShortStack
ccm-b0.32r1-87529	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:771280-771658	-	47	0.57	CGCGGCGACGUGGGUU		OtherRNA	ShortStack
ccm-b0.32r1-87533	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:778033-778430	.	48	0.58	ACAUAAAAGAAGUGGGCCUCUUGC		OtherRNA	ShortStack
ccm-b0.32r1-87537	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:789932-790573	.	63	0.77	ACUUGUCUGUGUAAAGCAUGGAUU		OtherRNA	ShortStack
ccm-b0.32r1-87552	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:833913-834360	.	44	0.54	AUCAACGGAUGACACUCACUCAUU		OtherRNA	ShortStack
ccm-b0.32r1-87568	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:876688-877378	.	83	1.01	AGAGCGGUAGAACAGAGCACCGGC		OtherRNA	ShortStack
ccm-b0.32r1-87586	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:948057-948753	+	63	0.77	ACCGGCCCGUGGGAAG		OtherRNA	ShortStack
ccm-b0.32r1-87619	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118a:1056981-1057347	.	45	0.55	AACCCUACUGUUUUAAACUUUGAC		OtherRNA	ShortStack
ccm-b0.32r1-87680	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118c:191932-192641	+	42	0.51	GUGAGGCGAUUCGGAGGGUUUGUGUCC		OtherRNA	ShortStack
ccm-b0.32r1-87707	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118c:369644-370662	.	47	0.57	AGACUGAGAAUGAUGCACAAUAGA		OtherRNA	ShortStack
ccm-b0.32r1-87717	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118c:387760-388915	.	90	1.10	CGCGGGGUGGAGCAGU		OtherRNA	ShortStack
ccm-b0.32r1-87720	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118c:399960-400731	.	91	1.11	UCCGGAAUUUGUGUCACUUCUUAA		OtherRNA	ShortStack
ccm-b0.32r1-87728	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118c:436222-436327	-	160	1.95	AAUUCUCUGUAAUUGUAUCUGCCU		OtherRNA	ShortStack
ccm-b0.32r1-87729	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118c:436917-437287	.	75	0.91	CAGAUAUCUCAGAAGCCACUU		OtherRNA	ShortStack
ccm-b0.32r1-87741	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold118c:559656-560323	.	49	0.60	UCGGGUGGGUGGGUGUGUGU		OtherRNA	ShortStack
ccm-b0.32r1-87749	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold119:38563-38970	+	44	0.54	UAUGAUGGACAAGGUG		OtherRNA	ShortStack
ccm-b0.32r1-87750	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold119:39048-39512	.	87	1.06	GCACUGUAAGCUUCUCAAGUU		OtherRNA	ShortStack
ccm-b0.32r1-87753	Cuscuta campestris (Field Dodder) 0.32	Ccam0.32_scaffold119:49279-51002	.	232	2.82	ACCAAACAUGAAUUCAGACUGACA		OtherRNA	ShortStack