| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| ccm-b0.32r1-82004 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold104:809822-809969 | - | 3,125 | 38.01 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| ccm-b0.32r1-21492 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold11:906127-906374 | - | 5,318 | 64.69 | GAGUGACGAGAAAGUGGCGUA | | MIRNA | ShortStack |
| ccm-b0.32r1-21639 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold11:1297525-1297707 | + | 317 | 3.86 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | ShortStack |
| ccm-b0.32r1-83269 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold110:66669-66831 | + | 106 | 1.29 | GAUAAAGGAGACUAGGAAGUU | | MIRNA | ShortStack |
| ccm-b0.32r1-83421 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold110:566254-566405 | - | 412 | 5.01 | GCCUGUUUCCCCUAAUGACGCC | | MIRNA | ShortStack |
| ccm-b0.32r1-83510 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold110:879140-879313 | + | 8,576 | 104.32 | GCUCAGGGGCCGAGAUGCAUG | | MIRNA | ShortStack |
| ccm-b0.32r1-84123 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold111:801250-801547 | + | 176,496 | 2,146.99 | UGUACCAUGAUUUGUAGACGAG | | MIRNA | ShortStack |
| ccm-b0.32r1-23068 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold12:2624646-2624901 | - | 2,012 | 24.48 | CCCGCUUUGCAUCAACUGAAU | miR168 | MIRNA | ShortStack |
| ccm-b0.32r1-94130 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold138:937502-937599 | - | 451 | 5.49 | GCGUAUGUGGAGCCAAGCAUG | miR160 | MIRNA | ShortStack |
| ccm-b0.32r1-23835 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold13b:579791-580041 | + | 442 | 5.38 | UGUACCAUGAUUUGCACACGAG | | MIRNA | ShortStack |
| ccm-b0.32r1-24548 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold13b:2867307-2867476 | - | 18,365 | 223.40 | UGAGACUGAAGAAGAUUGCCCCC | | MIRNA | ShortStack |
| ccm-b0.32r1-24849 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold13b:3654869-3654968 | + | 475 | 5.78 | UGAAGCUGCCAGCAUGAUCUU | miR167 | MIRNA | ShortStack |
| ccm-b0.32r1-96192 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold145:1200381-1200552 | + | 54 | 0.66 | UUGAUGCUCUAAUUGAUUGUG | | MIRNA | ShortStack |
| ccm-b0.32r1-97398 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold149:796343-796553 | + | 82 | 1.00 | ACUGGAAGUAUUCAGGGUCUA | | MIRNA | ShortStack |
| ccm-b0.32r1-25266 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold14b:258734-259003 | - | 200 | 2.43 | UGUUGAUAUGAGAAUGUGAGAUG | | MIRNA | ShortStack |
| ccm-b0.32r1-97453 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold150:78209-78388 | - | 103 | 1.25 | CCACUCGGCGGCCACUGACGA | | MIRNA | ShortStack |
| ccm-b0.32r1-98880 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold155:552676-552790 | - | 3,828 | 46.57 | ACAGGAGAGAAUGAAAAUGGA | | MIRNA | ShortStack |
| ccm-b0.32r1-27127 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold16:196145-196287 | - | 37,629 | 457.74 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| ccm-b0.32r1-100415 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold161a:621242-621432 | - | 1,960 | 23.84 | AGCUGCCCCAAGAAUUUCAUA | | MIRNA | ShortStack |
| ccm-b0.32r1-101423 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold165:421833-422001 | + | 2,608 | 31.73 | UACUCAGGCGCGGCGUAGCCAUU | | MIRNA | ShortStack |
| ccm-b0.32r1-101426 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold165:425726-425975 | + | 4,582 | 55.74 | UACUCAGGCGCGGCGUAGCCAUU | | MIRNA | ShortStack |
| ccm-b0.32r1-102661 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold170:605066-605209 | + | 146 | 1.78 | CAACUAGGAGCUCUGCUGCAUUU | | MIRNA | ShortStack |
| ccm-b0.32r1-102673 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold170:634907-635168 | - | 312 | 3.80 | CCUGCCCUGAAUCAAUUGAAU | | MIRNA | ShortStack |
| ccm-b0.32r1-104218 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold177:706875-707039 | + | 336 | 4.09 | GAAAACAUAUUGUUGCUCGAC | | MIRNA | ShortStack |
| ccm-b0.32r1-104759 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold180:75274-75368 | + | 86 | 1.05 | GAUGGGACUGGUGUAUAUAAAC | | MIRNA | ShortStack |
| ccm-b0.32r1-106516 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold188a:452551-452742 | + | 161 | 1.96 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | ShortStack |
| ccm-b0.32r1-106964 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold190a:485257-485352 | + | 271 | 3.30 | AGGACAGCAUUUGAGAGGAUU | | MIRNA | ShortStack |
| ccm-b0.32r1-107209 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold191:250330-250481 | + | 54,345 | 661.08 | AGGAAACAUAUUGUGGCUCGGC | | MIRNA | ShortStack |
| ccm-b0.32r1-107303 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold191:522925-523076 | + | 3,767 | 45.82 | UGACUGAGAAGUUGAGUGCUA | | MIRNA | ShortStack |
| ccm-b0.32r1-108191 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold196a:558327-558452 | - | 5,206 | 63.33 | UAGAGCGGAAAGGAUCGUCCAC | | MIRNA | ShortStack |
| ccm-b0.32r1-112504 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold220:1022453-1022572 | + | 98 | 1.19 | UUCCUGUGUACUGUAUUUCUUC | | MIRNA | ShortStack |
| ccm-b0.32r1-114884 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold236:257574-257764 | - | 7,820 | 95.13 | CCGGACCAGGCUUCAUUCCUC | miR166 | MIRNA | ShortStack |
| ccm-b0.32r1-34699 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold24:696869-697144 | + | 668 | 8.13 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | ShortStack |
| ccm-b0.32r1-35120 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold24:1949750-1949962 | - | 1,753 | 21.32 | UCUCUGUGUACUGUAUUUCUU | | MIRNA | ShortStack |
| ccm-b0.32r1-115448 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold240:165680-165920 | - | 6,040 | 73.47 | GUGAAACUUGGGGGUCUCGUG | | MIRNA | ShortStack |
| ccm-b0.32r1-115607 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold241:126758-126962 | + | 381 | 4.64 | AAAUAGUAGCAGUUCUGAAUU | | MIRNA | ShortStack |
| ccm-b0.32r1-116883 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold249:629590-629717 | - | 62 | 0.75 | UAGAAUAACACCAACUUUGACAGC | | MIRNA | ShortStack |
| ccm-b0.32r1-35727 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold25:1445785-1445998 | - | 186 | 2.26 | GCAGAAUGUAAUGCUUUAGAU | | MIRNA | ShortStack |
| ccm-b0.32r1-117811 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold259:55893-56008 | - | 1,611 | 19.60 | UCUGUCCUCUUCGCCGUUCAUC | | MIRNA | ShortStack |
| ccm-b0.32r1-117827 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold259:168212-168328 | + | 1,617 | 19.67 | UCUGUCCUCUUCGCCGUUCAUC | | MIRNA | ShortStack |
| ccm-b0.32r1-36897 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold26:2523683-2523888 | - | 2,604 | 31.68 | GGAGAUUGUACAAAGAGAUACU | | MIRNA | ShortStack |
| ccm-b0.32r1-118803 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold266:150960-151096 | + | 99 | 1.20 | GCGUAUGAGGAGCCAAGCAUA | miR160 | MIRNA | ShortStack |
| ccm-b0.32r1-38777 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold29:1201807-1202027 | + | 18,494 | 224.97 | UCCAAAGGGAUCGCAUUGCUC | miR393 | MIRNA | ShortStack |
| ccm-b0.32r1-38967 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold29:1788729-1789008 | - | 465 | 5.66 | GUGAACAUCAUCCACUACACG | | MIRNA | ShortStack |
| ccm-b0.32r1-12533 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold3:2379113-2379394 | + | 183 | 2.23 | UUCAGGGUCCAAUGGAGCACC | | MIRNA | ShortStack |
| ccm-b0.32r1-40171 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold30:2932879-2933086 | - | 330 | 4.01 | GGUAUGUCGUCUGGCUCGAUU | | MIRNA | ShortStack |
| ccm-b0.32r1-122753 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold308:309745-309877 | + | 95,671 | 1,163.79 | CAGCUUGAAAUGUAGUAUCCU | | MIRNA | ShortStack |
| ccm-b0.32r1-40519 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold31:129884-130086 | + | 4,469 | 54.36 | GAUGUUGAGAUUGAAGUGGUG | | MIRNA | ShortStack |
| ccm-b0.32r1-40522 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold31:136245-136382 | + | 4,631 | 56.33 | UGAUGGAAUGAAGAUGCCGAGU | | MIRNA | ShortStack |
| ccm-b0.32r1-40662 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold31:629539-629638 | + | 4,927 | 59.94 | GCUCACUCUCUAUCUGUCAUC | miR156 | MIRNA | ShortStack |
| ccm-b0.32r1-40666 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold31:645791-645957 | + | 1,101 | 13.39 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| ccm-b0.32r1-123448 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold318:82082-82220 | + | 605 | 7.36 | CAGGAGCUAUGUAUGCAGGGA | | MIRNA | ShortStack |
| ccm-b0.32r1-42832 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold33:808910-809104 | + | 2,936 | 35.72 | AGAAGUGGAAAUCCUUGAGU | | MIRNA | ShortStack |
| ccm-b0.32r1-45156 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold35:3719429-3719705 | + | 154 | 1.87 | CUACUUCUUCCAUAAUCACUC | | MIRNA | ShortStack |
| ccm-b0.32r1-45658 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold36:925955-926094 | + | 1,271 | 15.46 | UGAAGCUGCCAGCAUGAUCUU | miR167 | MIRNA | ShortStack |
| ccm-b0.32r1-45813 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold36:1393551-1393660 | - | 7,149 | 86.96 | UAAGUCGUUCAUGUGCUUCGC | | MIRNA | ShortStack |
| ccm-b0.32r1-126870 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold384:29618-29909 | + | 227 | 2.76 | UGUUGAUAUGAGAAUGUGAGAUG | | MIRNA | ShortStack |
| ccm-b0.32r1-13195 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold4:448359-448654 | + | 24,160 | 293.89 | CUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | ShortStack |
| ccm-b0.32r1-48402 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold40:502351-502439 | + | 751 | 9.14 | UGUAAAAGCAUUCUGGAUCUA | | MIRNA | ShortStack |
| ccm-b0.32r1-128556 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold425:242879-243039 | - | 11,826 | 143.86 | AAGUGGUGGAAAAGCUCGAGU | | MIRNA | ShortStack |
| ccm-b0.32r1-50472 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold43:406344-406482 | + | 15,579 | 189.51 | UCGGACCAGGCUUCAUUCCUC | miR166 | MIRNA | ShortStack |
| ccm-b0.32r1-50502 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold43:501159-501379 | + | 8,803 | 107.08 | UGUCCCGGUGAACAGUUUUCUU | | MIRNA | ShortStack |
| ccm-b0.32r1-52431 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold44:3797182-3797309 | - | 40,787 | 496.15 | UCGGACCAGGCUUCAUUCCUC | miR166 | MIRNA | ShortStack |
| ccm-b0.32r1-129886 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold473:162846-163003 | + | 21,960 | 267.13 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| ccm-b0.32r1-14416 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold5:130418-130567 | - | 2,326 | 28.30 | UGAGGAAUUAUGGAAAGAAGGG | | MIRNA | ShortStack |
| ccm-b0.32r1-130470 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold502:67572-67795 | - | 233 | 2.83 | UGAAUUGUCUCUGAAGCUGAC | | MIRNA | ShortStack |
| ccm-b0.32r1-59865 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold57:48113-48331 | - | 783 | 9.53 | CGCCACUUCUUCGUCACUCCC | | MIRNA | ShortStack |
| ccm-b0.32r1-60006 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold57:419456-419730 | + | 48 | 0.58 | AGAUAUUAGUGCGGUUCAAUG | miR171 | MIRNA | ShortStack |
| ccm-b0.32r1-61427 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold59:1824796-1825091 | - | 245 | 2.98 | CACCGAUAGUGAAUGGUGGCUU | | MIRNA | ShortStack |
| ccm-b0.32r1-16317 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold6:2531900-2532110 | + | 2,234 | 27.18 | UCUUCUUCCCAUAUUUGCUCUA | | MIRNA | ShortStack |
| ccm-b0.32r1-62277 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold60:1169246-1169358 | + | 174 | 2.12 | GGAUGAGAAACCUAGGAAGAC | | MIRNA | ShortStack |
| ccm-b0.32r1-64332 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold64:1174404-1174554 | - | 53 | 0.65 | UGCAUUUACACCUGCACCUAC | miR530 | MIRNA | ShortStack |
| ccm-b0.32r1-134328 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold6469:778-906 | + | 108 | 1.31 | GGAGUGCAUUAGGGCUGGGCC | | MIRNA | ShortStack |
| ccm-b0.32r1-131916 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold678:7048-7141 | - | 810 | 9.85 | UUACCUUUUAAUUUGAACCUU | | MIRNA | ShortStack |
| ccm-b0.32r1-131923 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold678:22930-23043 | + | 755 | 9.18 | UUACCUUUUAAUUUGAACCUU | | MIRNA | ShortStack |
| ccm-b0.32r1-17036 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold7:1040604-1040751 | - | 27,583 | 335.53 | UUUGCAUAAAUUCGUAGACUAG | | MIRNA | ShortStack |
| ccm-b0.32r1-17045 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold7:1063181-1063336 | - | 325 | 3.95 | CAGGAAGAAAGAAAAUGUAGA | | MIRNA | ShortStack |
| ccm-b0.32r1-17113 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold7:1280020-1280148 | + | 6,590 | 80.16 | UGAUGGAAUGAAGAUGCGGAGUA | | MIRNA | ShortStack |
| ccm-b0.32r1-17253 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold7:1749507-1749620 | + | 551 | 6.70 | GCUCACUCUCUAUCUGUCAUC | miR156 | MIRNA | ShortStack |
| ccm-b0.32r1-67349 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold72:118623-118768 | - | 3,029 | 36.85 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| ccm-b0.32r1-70542 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold79:831033-831179 | + | 1,664 | 20.24 | UCCAAAGGGAUCACAUUGCUCC | miR393 | MIRNA | ShortStack |
| ccm-b0.32r1-72581 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold83:642752-642894 | - | 221 | 2.69 | UUGAAUGAGUGCUUGAAAGCC | | MIRNA | ShortStack |
| ccm-b0.32r1-74145 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold86:8017-8208 | - | 75 | 0.91 | AGGGGCUGGUUCCUGUGAGAAUGC | | MIRNA | ShortStack |
| ccm-b0.32r1-75408 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold89c:46892-47145 | + | 460 | 5.60 | ACAUCGAUGAGAUGAUUCGGC | | MIRNA | ShortStack |
| ccm-b0.32r1-19049 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold9:103185-103307 | + | 398 | 4.84 | UCUGCAUGUAUUCGUACACCA | | MIRNA | ShortStack |
| ccm-b0.32r1-75890 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold90:436998-437248 | + | 66 | 0.80 | CCUAAGAAUGAUUUUAUACUC | | MIRNA | ShortStack |
| ccm-b0.32r1-76058 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold90:995588-995711 | + | 1,657 | 20.16 | UUGCUAGAAUAUGAAGAGGUU | | MIRNA | ShortStack |
| ccm-b0.32r1-76923 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold92b:991778-992043 | + | 7,408 | 90.12 | CCCGGACACUUUGCAAGGAAA | | MIRNA | ShortStack |
| ccm-b0.32r1-77568 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold93b:1273972-1274195 | - | 42 | 0.51 | CAAUUUCACCCUGUCCCCACC | | MIRNA | ShortStack |
| ccm-b0.32r1-79993 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold99:341487-341691 | - | 58 | 0.71 | AGAAAUGUUAGACCAUCUACC | | MIRNA | ShortStack |
| ccm-b0.32r1-80119 | Cuscuta campestris (Field Dodder) 0.32 | Ccam0.32_scaffold99:713675-713948 | - | 11,054 | 134.47 | UCUUGGUGAUGUUUGGGACGAC | | MIRNA | ShortStack |
Data from Lunardon et al. (2020)