het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Fragaria vesca (Woodland Strawberry) genome build 2.0 (fve-b2.0)

Version v2.0 of Fragaria vesca cv. Hawaii4 from The Genome Database for Rosaceae

Locus type

Annotation source

Name contains:

Family contains:

NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
fve-b2.0r1-480Fragaria vesca (Woodland Strawberry) 2.0Fvb1:2269518-2269917-4931.40AUUGUGUGUAUUGCAAAUCGGUAsiRNA23ShortStack
fve-b2.0r1-794Fragaria vesca (Woodland Strawberry) 2.0Fvb1:3619769-3619864+2,8368.04GGGGAUGUAGCUCAAAUGGUAGAsiRNA23ShortStack
fve-b2.0r1-2537Fragaria vesca (Woodland Strawberry) 2.0Fvb1:10764348-10764458+22,59064.02GGGGAUGUAGCUCAAAUGGUAGAsiRNA23ShortStack
fve-b2.0r1-4443Fragaria vesca (Woodland Strawberry) 2.0Fvb1:17824160-17824242-57,433162.75GGGGAUGUAGCUCAGAUGGUAGAsiRNA23ShortStack
fve-b2.0r1-4872Fragaria vesca (Woodland Strawberry) 2.0Fvb1:19452841-19453004+3200.91UGGACGUAAGCGUAGUAGCCCUGsiRNA23ShortStack
fve-b2.0r1-5870Fragaria vesca (Woodland Strawberry) 2.0Fvb1:23040888-23040921+2960.84UAUGGGUAGCCCUAUCUUCGGUAsiRNA23ShortStack
fve-b2.0r1-8323Fragaria vesca (Woodland Strawberry) 2.0Fvb2:8275704-8275729+1200.34UCAAUGAUGGUGGGUCGUAGAUAsiRNA23ShortStack
fve-b2.0r1-8419Fragaria vesca (Woodland Strawberry) 2.0Fvb2:8657559-8657844+6291.78UUGGACGCGAGCGUAGUAGCCCAsiRNA23ShortStack
fve-b2.0r1-11159Fragaria vesca (Woodland Strawberry) 2.0Fvb2:18608252-18608340+70,689200.32GGGGAUGUAGCUCAGAUGGUAGAsiRNA23ShortStack
fve-b2.0r1-12651Fragaria vesca (Woodland Strawberry) 2.0Fvb2:24968774-24968941-5821.65UAUCGGAUGUCCCCGAAGGGACAsiRNA23ShortStack
fve-b2.0r1-12874Fragaria vesca (Woodland Strawberry) 2.0Fvb2:26167673-26167739+6861.94GCGGGGAUAGCUCAGUUGGGAGAsiRNA23ShortStack
fve-b2.0r1-13280Fragaria vesca (Woodland Strawberry) 2.0Fvb2:28032453-28032517-7,55121.40GGGGAUGUAGCUCAGAUGGUAGAsiRNA23ShortStack
fve-b2.0r1-13700Fragaria vesca (Woodland Strawberry) 2.0Fvb3:938797-938821+2570.73GCGGGGAUAGCUCAGUUGGGAGAsiRNA23ShortStack
fve-b2.0r1-18317Fragaria vesca (Woodland Strawberry) 2.0Fvb3:18477641-18477750+1,5554.41CUGAGAAAACUGUAGUAUUGAUAsiRNA23ShortStack
fve-b2.0r1-19396Fragaria vesca (Woodland Strawberry) 2.0Fvb3:22389543-22389650.2560.73UGGUGUGACGUGAGCGUUGGACAsiRNA23ShortStack
fve-b2.0r1-19599Fragaria vesca (Woodland Strawberry) 2.0Fvb3:23106957-23107457.4421.25AUAGGGAUUAACAUGAAGUUACAsiRNA23ShortStack
fve-b2.0r1-20429Fragaria vesca (Woodland Strawberry) 2.0Fvb3:25900966-25901009-2430.69GACGUGAGCGUUGGACGCGAGCAsiRNA23ShortStack
fve-b2.0r1-20564Fragaria vesca (Woodland Strawberry) 2.0Fvb3:26332483-26332600.1850.52AGUGUGAUAUAUGAGAUUGUUCAsiRNA23ShortStack
fve-b2.0r1-20932Fragaria vesca (Woodland Strawberry) 2.0Fvb3:27546416-27546441-2330.66GCGGGGAUAGCUCAGUUGGGAGAsiRNA23ShortStack
fve-b2.0r1-21147Fragaria vesca (Woodland Strawberry) 2.0Fvb3:28348020-28348255+8212.33GACGUGAGCGUUGGACGUAAGCAsiRNA23ShortStack
fve-b2.0r1-21931Fragaria vesca (Woodland Strawberry) 2.0Fvb3:31570644-31570782.1,6134.57UCGAAUGAAUUCAAGGACAUAUUCsiRNA23ShortStack
fve-b2.0r1-22095Fragaria vesca (Woodland Strawberry) 2.0Fvb3:32139840-32139990-6361.80GAGAAGGGCUGUAUAUAUAUAUGsiRNA23ShortStack
fve-b2.0r1-22185Fragaria vesca (Woodland Strawberry) 2.0Fvb3:32527059-32527084+1,0492.97UAUUGCUGGUAUGAUCGCAUCCAsiRNA23ShortStack
fve-b2.0r1-22998Fragaria vesca (Woodland Strawberry) 2.0Fvb4:2360130-2360303-3370.96AGAAGCGGAUAUUAAUUUAGACAsiRNA23ShortStack
fve-b2.0r1-26996Fragaria vesca (Woodland Strawberry) 2.0Fvb4:16444150-16444434.4521.28UAUGGGUAGCCCUAUCUUCGGUUsiRNA23ShortStack
fve-b2.0r1-27074Fragaria vesca (Woodland Strawberry) 2.0Fvb4:16726902-16727323-3781.07UGGAGUAAACUGUCGAGCGCAUAsiRNA23ShortStack
fve-b2.0r1-27082Fragaria vesca (Woodland Strawberry) 2.0Fvb4:16747509-16747761-3531.00UUGGAUAGUUAAUGGAGUAAUCAsiRNA23ShortStack
fve-b2.0r1-27758Fragaria vesca (Woodland Strawberry) 2.0Fvb4:19138903-19139697.3,0548.65CAACUUUUAGUCAAAUGGUGGGAsiRNA23ShortStack
fve-b2.0r1-30401Fragaria vesca (Woodland Strawberry) 2.0Fvb4:29327806-29327836+2750.78AGGGGACUGUAUAUAUAUAUAUAsiRNA23ShortStack
fve-b2.0r1-31004Fragaria vesca (Woodland Strawberry) 2.0Fvb4:32226078-32226144-25,15471.28GGGGAUGUAGCUCAGAUGGUAGAsiRNA23ShortStack
fve-b2.0r1-33830Fragaria vesca (Woodland Strawberry) 2.0Fvb5:11797129-11797326-7472.12CGCCAGGGACUAAGAGUAAAACUsiRNA23ShortStack
fve-b2.0r1-33852Fragaria vesca (Woodland Strawberry) 2.0Fvb5:11895559-11895733+3350.95UUCGGGUCCCACUGGGCGUGCCAsiRNA23ShortStack
fve-b2.0r1-33854Fragaria vesca (Woodland Strawberry) 2.0Fvb5:11907316-11907486+4311.22UUCGGGUCCCACUGGGCGUGCCAsiRNA23ShortStack
fve-b2.0r1-34265Fragaria vesca (Woodland Strawberry) 2.0Fvb5:13402546-13402639-1420.40UUGAUGUAAACAAUUGUAGGCCUsiRNA23ShortStack
fve-b2.0r1-35290Fragaria vesca (Woodland Strawberry) 2.0Fvb5:17235867-17235891-2100.60AGGACUAACAUGAUGAUCGACCAsiRNA23ShortStack
fve-b2.0r1-36877Fragaria vesca (Woodland Strawberry) 2.0Fvb5:22890701-22890760-4231.20GCGGGGAUAGCUCAGUUGGGAGAsiRNA23ShortStack
fve-b2.0r1-37421Fragaria vesca (Woodland Strawberry) 2.0Fvb5:24949133-24949340+8262.34AGAAUGAGAGACUGAAUGAAACAsiRNA23ShortStack
fve-b2.0r1-37643Fragaria vesca (Woodland Strawberry) 2.0Fvb5:25738768-25738958.2940.83UGCUGCAGAUUUGGCGUUUGGUAsiRNA23ShortStack
fve-b2.0r1-39383Fragaria vesca (Woodland Strawberry) 2.0Fvb6:3446348-3446530-9902.81CAUUCCUCUCCACACCUCUUACUsiRNA23ShortStack
fve-b2.0r1-42085Fragaria vesca (Woodland Strawberry) 2.0Fvb6:12948391-12948416+2690.76GAUUAUGUGCGGAGGAUUAUUCAsiRNA23ShortStack
fve-b2.0r1-46021Fragaria vesca (Woodland Strawberry) 2.0Fvb6:26661092-26661223.6781.92CAAUGAGAUAAAGAUGUAAAACUsiRNA23ShortStack
fve-b2.0r1-47749Fragaria vesca (Woodland Strawberry) 2.0Fvb6:32839372-32839444+28,43080.56GGGGAUGUAGCUCAGAUGGUAGAsiRNA23ShortStack
fve-b2.0r1-49326Fragaria vesca (Woodland Strawberry) 2.0Fvb7:831610-831725.2510.71AGAAGCGGAUAUUAAUUUAGACAsiRNA23ShortStack
fve-b2.0r1-49591Fragaria vesca (Woodland Strawberry) 2.0Fvb7:1753244-1753268+3040.86UAUGGGUAGCCCUAUCUUCGGUAsiRNA23ShortStack
fve-b2.0r1-50218Fragaria vesca (Woodland Strawberry) 2.0Fvb7:4157621-4157741.5631.60UAUGAGUAGCCCUAUCUUCGGUAsiRNA23ShortStack
fve-b2.0r1-50737Fragaria vesca (Woodland Strawberry) 2.0Fvb7:6420888-6421091+1440.41AUUUUGGGGAGGUUGUAUUUACAsiRNA23ShortStack
fve-b2.0r1-51986Fragaria vesca (Woodland Strawberry) 2.0Fvb7:11405384-11405707.9112.58UCGGGAAAAGGUCGUCUGUGAUAsiRNA23ShortStack
fve-b2.0r1-52408Fragaria vesca (Woodland Strawberry) 2.0Fvb7:12973892-12973966+31,22588.48GGGGAUGUAGCUCAGAUGGUAGAsiRNA23ShortStack
fve-b2.0r1-54260Fragaria vesca (Woodland Strawberry) 2.0Fvb7:20529102-20529328+5641.60AAAUCAGAUUGAGAAUUCCUAAUsiRNA23ShortStack