het siRNAsData from Lunardon et al. (2020)miRNA

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Genome

Fragaria x ananassa (Strawberry) genome build 1.0 (fan-b1.0)

Version v1.0 of Fragaria x ananassa cv. Reikou from The Genome Database for Rosaceae

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
fan-b1.0r1-319Fragaria x ananassa (Strawberry) 1.0FANhyb_icon00002377_a:905-928-1601.06UUUGGAUUGAAGGGAGCUCCUmiR159nearMIRNAShortStack
fan-b1.0r1-378Fragaria x ananassa (Strawberry) 1.0FANhyb_icon00002946_a:391-412-1140.75UUUGUUAAAUGGAACCACCACAnearMIRNAShortStack
fan-b1.0r1-613Fragaria x ananassa (Strawberry) 1.0FANhyb_icon00005210_a:313-334-1671.10UAAGAUGCAAGUAGUACCCGAnearMIRNAShortStack
fan-b1.0r1-644Fragaria x ananassa (Strawberry) 1.0FANhyb_icon00005607_a:150-193+3762.48GCAGGUUGUCCUUCGCUAGUCmiR169nearMIRNAShortStack
fan-b1.0r1-996Fragaria x ananassa (Strawberry) 1.0FANhyb_icon00009918_a:238-260+3092.04UUGAUAGAGAUUGAGUAGGAUUnearMIRNAShortStack
fan-b1.0r1-1533Fragaria x ananassa (Strawberry) 1.0FANhyb_icon00017815_a:1-130-3262.15GCUAUUAGGGGUGUUGCAAUCnearMIRNAShortStack
fan-b1.0r1-1751Fragaria x ananassa (Strawberry) 1.0FANhyb_icon00021891_a:1-142-101,130666.99UUGACAGAAGAGAGUGAGCACmiR156nearMIRNAShortStack
fan-b1.0r1-2056Fragaria x ananassa (Strawberry) 1.0FANhyb_icon00027851_a:279-407-2,04113.46UUGGACUGAAGGGUGCUCCUUmiR319nearMIRNAShortStack
fan-b1.0r1-2674Fragaria x ananassa (Strawberry) 1.0FANhyb_icon00040969_a:226-328-2,83918.72UUGACGGAAGAGAGCGAGCACmiR156nearMIRNAShortStack
fan-b1.0r1-3068Fragaria x ananassa (Strawberry) 1.0FANhyb_icon00050788_a:35-171+1721.13UCCGGACAGACGACGUCGCCnearMIRNAShortStack
fan-b1.0r1-4518Fragaria x ananassa (Strawberry) 1.0FANhyb_icon18696281_s:123-145-4,12327.19UAUGUCGCAGGAGAGAUGGUACnearMIRNAShortStack
fan-b1.0r1-4552Fragaria x ananassa (Strawberry) 1.0FANhyb_icon18808757_s:120-141+15,463101.98UAUGUCGCAGGAGAGAUGGUACnearMIRNAShortStack
fan-b1.0r1-4562Fragaria x ananassa (Strawberry) 1.0FANhyb_icon18857007_s:118-155-3762.48AAGGCAACAAUAGAAGAGAGCUAUnearMIRNAShortStack
fan-b1.0r1-4721Fragaria x ananassa (Strawberry) 1.0FANhyb_icon19427651_s:1-65+6294.15UCUUUUUUUGAUGGCUGGAAUmiR11296nearMIRNAShortStack
fan-b1.0r1-4864Fragaria x ananassa (Strawberry) 1.0FANhyb_icon20011737_s:290-362-4,71531.10UGAACUGAGGGUACGAUCUGAnearMIRNAShortStack
fan-b1.0r1-5289Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00000005:53598-53620+4032.66UCCAAAGGGAUCGCAUUGAUUUmiR393nearMIRNAShortStack
fan-b1.0r1-5350Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00000007:205041-205070-950.63AUUGACAAAGAGAUUCAUGAUCAGnearMIRNAShortStack
fan-b1.0r1-8355Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00000322:2690-2757-7574.99GGAGGGUGGAGAACGGAGGGAnearMIRNAShortStack
fan-b1.0r1-9796Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00000594:26022-26119+9,09659.99GGAAUGUUGUCUGGCUCGAGGmiR166nearMIRNAShortStack
fan-b1.0r1-9797Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00000594:26200-26226+2,19914.50UCGGACCAGGCUUCAUUCCCCmiR166nearMIRNAShortStack
fan-b1.0r1-10885Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00000889:26636-26658-1,1427.53UUGAAGUGAUUUGAGGAUUGGnearMIRNAShortStack
fan-b1.0r1-10886Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00000889:28348-28370-1,1547.61UUGAAGUGAUUUGAGGAUUGGnearMIRNAShortStack
fan-b1.0r1-11632Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00001139:4878-5116+14,62596.46CAGAAAACUGGAAUUCGGCGGnearMIRNAShortStack
fan-b1.0r1-12242Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00001408:8437-8460-18,555122.38UGACAGAAGAUAGAGAGCACmiR156nearMIRNAShortStack
fan-b1.0r1-12620Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00001639:1017-1037+3092.04UGCCAAAGGAGAUUUGCUCGGmiR399nearMIRNAShortStack
fan-b1.0r1-13010Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00001889:2815-2870-3922.59UCUAGGGUGAUUGAGCAGGGUnearMIRNAShortStack
fan-b1.0r1-13576Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00002422:2905-3047+390,8362,577.70GGGGAUGUAGCUCAGAUGGUnearMIRNAShortStack
fan-b1.0r1-15307Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00004504:2179-2226-4,06726.82UCAUCCAACACAUCAUCGGCAUnearMIRNAShortStack
fan-b1.0r1-16406Fragaria x ananassa (Strawberry) 1.0FANhyb_rscf00006001:387-412-4,54329.96UACGCAGGAGAGAUGGCGCCGUnearMIRNAShortStack