| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| tcc-b1.1r1-12539 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:93443-94260 | . | 86 | 40.62 | AUAGAUGUGGAUCUCAGACCUAUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-12571 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:133532-133649 | + | 8 | 3.78 | AUUCACUCGGAUCUCUUCUGUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-862 | Theobroma cacao (Cacao) 1.1 | scaffold_1:405437-405534 | . | 5 | 2.36 | AACAAAAUGUCAGAUGGUGGAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-884 | Theobroma cacao (Cacao) 1.1 | scaffold_1:771319-771349 | - | 5 | 2.36 | AGAACGUGUGAGGUAACUGUGAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-911 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1278178-1280309 | . | 240 | 113.36 | UUGGAAAAGAGAUUGUAGAGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-962 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2481227-2481257 | - | 81 | 38.26 | AUUGCUAAUCACUUGAUGUAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-986 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2862129-2862293 | + | 5 | 2.36 | UGCGUUUGCAUUUUGAGAGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1007 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3280345-3280661 | . | 10 | 4.72 | UUUCCAUUGUGUAGAGCUAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1035 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3807552-3807586 | . | 5 | 2.36 | CGCCAUCUGUCGUGACGUGGGGGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-1051 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4059076-4059130 | - | 11 | 5.20 | CCUUUUGAUAUGUGGUGAGGUAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1087 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4711893-4711955 | + | 5 | 2.36 | UACAAGAGCUCAAAGUAGGCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1177 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5986588-5986768 | . | 5 | 2.36 | AUCAUUAUUUUGCUUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1268 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7160462-7160510 | - | 5 | 2.36 | CGAUUUUGUGUAGAAUAACUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-1357 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8632008-8632579 | . | 179 | 84.55 | CGUGAACUAGCUGAACUCUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-1358 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8632740-8633013 | . | 41 | 19.37 | AAGGAACAGAUAGGGAGGCUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1359 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8633233-8633445 | . | 46 | 21.73 | CUGAUUUGCUGAACAACCAUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1360 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8634292-8634453 | . | 6 | 2.83 | CCUGCGCCUGUAUUCCUCUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1384 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8954915-8955007 | - | 8 | 3.78 | ACUCUCUAUAGUAUCUGAACAUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1395 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9266867-9267110 | . | 11 | 5.20 | UCAUACCUGUCUUCUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1455 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10287717-10287782 | - | 10 | 4.72 | UUGUGUCGAUGACAUGGUUGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-1465 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10367461-10367781 | . | 17 | 8.03 | UGGAACUUGUUAUCAUCUUUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-1466 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10368429-10368594 | + | 6 | 2.83 | GAAACGAUUUGUUGUAGAGAC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1535 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11415610-11415775 | . | 6 | 2.83 | AAUCGUGUCGUGUCGUAUAUUGAC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1573 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11944873-11945103 | . | 8 | 3.78 | CAAAAUCGUUGUUCAUCGCUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1592 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12215697-12215971 | . | 25 | 11.81 | UUAUUUACGGACUUGCAAGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1609 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12414218-12414392 | . | 6 | 2.83 | AAAAGAAGAAGUUGUACGUGAACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-1610 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12419654-12419770 | . | 6 | 2.83 | UGGAGUUGGUGGUCGGAGCCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1643 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13043851-13044063 | + | 6 | 2.83 | AAGCACUUCUGUUGAAAACGUAUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1655 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13213973-13214971 | . | 119 | 56.21 | GACUGCUAGAGAGAUAUUCGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-1656 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13215310-13215538 | . | 7 | 3.31 | UUUCACCAGGACUGAAUGGGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-1699 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13855975-13856116 | - | 7 | 3.31 | UGUCGUGUCGUGUCGUGUUAC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1741 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14922503-14922676 | . | 6 | 2.83 | UUUUUAGGUCUAGUGAAGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1752 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15152065-15152280 | + | 6 | 2.83 | GAGAGGAUUUGAAAUUUUGUUCGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1769 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15555756-15555885 | . | 5 | 2.36 | CCUAGAAAUUUCUGGAGAAUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1790 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15914113-15914218 | + | 5 | 2.36 | CAGUUGGUAUCAGAACAUACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1792 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15997516-15997538 | + | 26 | 12.28 | AACAAGAAUUCUUGAACAGCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-1814 | Theobroma cacao (Cacao) 1.1 | scaffold_1:16840531-16840659 | . | 10 | 4.72 | AGAAAGAGAAUGCUGACUUGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-1815 | Theobroma cacao (Cacao) 1.1 | scaffold_1:16841209-16841605 | . | 59 | 27.87 | UUAGCGGCUGUGAGUUCAUACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1816 | Theobroma cacao (Cacao) 1.1 | scaffold_1:16841687-16841774 | . | 24 | 11.34 | CGUGGACUUCAGCUAUAACUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1826 | Theobroma cacao (Cacao) 1.1 | scaffold_1:16933645-16933809 | + | 32 | 15.11 | UGAUUUAGAGGAUGUAGCCUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1841 | Theobroma cacao (Cacao) 1.1 | scaffold_1:17401325-17401560 | . | 8 | 3.78 | GCAACACGUGUACUCGAUCCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1842 | Theobroma cacao (Cacao) 1.1 | scaffold_1:17401741-17401814 | . | 10 | 4.72 | AGUUAUCUUCGCUACUGAUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1908 | Theobroma cacao (Cacao) 1.1 | scaffold_1:20778962-20779139 | - | 6 | 2.83 | AAGAAAAGACGAAACCUGAUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-1910 | Theobroma cacao (Cacao) 1.1 | scaffold_1:20850076-20850242 | + | 11 | 5.20 | AAUAAAGACAUAGUACCUAUCACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-1923 | Theobroma cacao (Cacao) 1.1 | scaffold_1:22035410-22035497 | . | 11 | 5.20 | AUGUGUCACGAUCCGGUACUCUCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-1944 | Theobroma cacao (Cacao) 1.1 | scaffold_1:23627068-23627137 | - | 6 | 2.83 | CGAGCUCGUGACAACCGCUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-1953 | Theobroma cacao (Cacao) 1.1 | scaffold_1:24299339-24299428 | + | 6 | 2.83 | GAAAGUUUGUCGUGGAGGCGUGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2070 | Theobroma cacao (Cacao) 1.1 | scaffold_1:29502423-29502567 | . | 6 | 2.83 | UUCUACCCUAACCAACAGUGCAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2079 | Theobroma cacao (Cacao) 1.1 | scaffold_1:30008052-30008190 | . | 5 | 2.36 | GAGAUCAGGGAACAGAUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-2097 | Theobroma cacao (Cacao) 1.1 | scaffold_1:30471611-30471656 | - | 5 | 2.36 | CGACUGAAUCUUAUCACAACGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2131 | Theobroma cacao (Cacao) 1.1 | scaffold_1:31011519-31011682 | + | 5 | 2.36 | AUUUUUGGGUAUUGUGUGACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2162 | Theobroma cacao (Cacao) 1.1 | scaffold_1:31375870-31375956 | . | 5 | 2.36 | UCUAAAUCUAGGUGAUGACUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2171 | Theobroma cacao (Cacao) 1.1 | scaffold_1:31518445-31518554 | . | 6 | 2.83 | CGGUUGUCACUGGCUCGAUGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2203 | Theobroma cacao (Cacao) 1.1 | scaffold_1:32099953-32100072 | + | 5 | 2.36 | UGAUGUUAAAGGAAGAUUCUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2247 | Theobroma cacao (Cacao) 1.1 | scaffold_1:32725164-32725205 | - | 9 | 4.25 | AUCGAUACAUUCUGAACAAGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2296 | Theobroma cacao (Cacao) 1.1 | scaffold_1:33524124-33524244 | - | 10 | 4.72 | GGGAGGACGCCGGCGCG | | siRNA21 | ShortStack |
| tcc-b1.1r1-2344 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34241239-34241368 | - | 8 | 3.78 | GACACGUUUGAUUCGCGGAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2361 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34576201-34576484 | . | 1,236 | 583.79 | UCAGGUAGGUUGUACUCGUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2362 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34576908-34577080 | . | 272 | 128.47 | UCAUCUGCAACAUUACUUGGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-2363 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34577165-34577927 | . | 1,047 | 494.52 | CAAGUAGCUCUUCAAUAUUGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2365 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34580954-34581229 | . | 26 | 12.28 | AUCCAACCGGUCUUGUUUUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-2366 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34581570-34581641 | - | 5 | 2.36 | CCAAGUUAGGAGGCAAAUCGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2367 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34581793-34581957 | . | 22 | 10.39 | AUGACGGGCUAGAAUAUCAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2368 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34582089-34582173 | - | 21 | 9.92 | UCUUGUUGGAUUGGUGCCUCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2369 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34587173-34587621 | . | 78 | 36.84 | UUGUCGAGAACAGUUGAAGUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-2370 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34588141-34588232 | . | 36 | 17.00 | UCAUCUGCAACCUGACUUGGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-2371 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34588317-34588679 | . | 149 | 70.38 | UUCUUGUGUGGAUUCAGCAUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2372 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34589304-34589664 | . | 75 | 35.42 | UCAGCUGUUGAUCUGCAUUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-2373 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34589793-34589833 | . | 6 | 2.83 | AUGCUGUUUUACAUCUCUAGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-2374 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34590003-34590178 | . | 6 | 2.83 | AACGUGUUGGAACCAGAUAGUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-2376 | Theobroma cacao (Cacao) 1.1 | scaffold_1:34592947-34593171 | - | 15 | 7.09 | CUUCCGACUGUGUUAAUGGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2404 | Theobroma cacao (Cacao) 1.1 | scaffold_1:35044592-35044619 | . | 5 | 2.36 | AUAUCACUGCAGCAUUGACGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2425 | Theobroma cacao (Cacao) 1.1 | scaffold_1:35426321-35426977 | . | 25 | 11.81 | UGAACUGCCCGAUAUUAGAGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-2426 | Theobroma cacao (Cacao) 1.1 | scaffold_1:35427097-35427883 | . | 41 | 19.37 | AAGCUGUCCUGACGAUGUUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-2441 | Theobroma cacao (Cacao) 1.1 | scaffold_1:35637711-35637731 | - | 5 | 2.36 | AGCUCUCUGAACUCCAAACC | | siRNA21 | ShortStack |
| tcc-b1.1r1-2477 | Theobroma cacao (Cacao) 1.1 | scaffold_1:36308432-36308466 | + | 5 | 2.36 | AACUCCGGACUUGUUAAGGCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2544 | Theobroma cacao (Cacao) 1.1 | scaffold_1:37741758-37741993 | . | 5 | 2.36 | UGUUUCGCGGACGAUUACUCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2582 | Theobroma cacao (Cacao) 1.1 | scaffold_1:38381653-38381806 | . | 5 | 2.36 | UGACCUUACUAACUCAGCAGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2583 | Theobroma cacao (Cacao) 1.1 | scaffold_1:38382273-38382469 | . | 6 | 2.83 | CUUGUGUUGCGGGGAAGCCUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2584 | Theobroma cacao (Cacao) 1.1 | scaffold_1:38382555-38384338 | . | 758 | 358.02 | CAAGAGUUGGAAGUUGGUUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-2586 | Theobroma cacao (Cacao) 1.1 | scaffold_1:38388893-38389216 | . | 14 | 6.61 | GCUCUGAGGCUGAGCUACCAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2588 | Theobroma cacao (Cacao) 1.1 | scaffold_1:38397503-38397892 | . | 29 | 13.70 | CUAGAACUAUCAAGAAUCUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2618 | Theobroma cacao (Cacao) 1.1 | scaffold_1:38786243-38786479 | + | 15 | 7.09 | UUCAUUCCAAAUAUCAUCUAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-14 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:252932-253145 | . | 7 | 3.31 | AACCACUCUGUCACUGUGCUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-15 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:256755-257256 | . | 24 | 11.34 | UUGAAGGGUAAGAAGAAAUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-17 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:265411-265551 | . | 12 | 5.67 | UUCUGGAGAUGCUUUGAAGGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-18 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:265634-267018 | . | 104 | 49.12 | UUGUAGUUCUCAUGACAGAUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-20 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:275172-276150 | . | 210 | 99.19 | UUAUCGGAGAAAGAUUGCUGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-23 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:283027-283551 | . | 34 | 16.06 | CAACAUCUUGAUCUCAACGGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-24 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:284139-284343 | . | 10 | 4.72 | CUAGCGUCUUUCCUUUUUCUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-25 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:284451-284669 | . | 20 | 9.45 | CGUUACCGGAGAAAGAUUGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-26 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:290725-291067 | . | 15 | 7.09 | UGCAGCUGCAUUUUAUCACAA | | siRNA21 | ShortStack |
| tcc-b1.1r1-27 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:291148-291234 | . | 8 | 3.78 | ACAUCUACGGUCUUUGAAGAA | | siRNA21 | ShortStack |
| tcc-b1.1r1-28 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:291718-292280 | - | 44 | 20.78 | CGAGUGCUCUGUUUCAUUUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-89 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1313811-1313934 | - | 19 | 8.97 | GAGGGUAGGAUCAUGUCG | | siRNA21 | ShortStack |
| tcc-b1.1r1-90 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1314037-1314144 | - | 91 | 42.98 | UCUUUUGGAUAUGUUUACAAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-108 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1610087-1610118 | . | 6 | 2.83 | UUUCAUCUCUGAUACUACGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-110 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1651208-1651328 | . | 7 | 3.31 | AACCCAACUUUGGGUGACUGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-121 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1712224-1712330 | - | 5 | 2.36 | GAGAUGGUGAAAAGAUGUGGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-122 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1712554-1712759 | . | 19 | 8.97 | AGAUCUUGCAAAACUUCUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-126 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1748122-1748258 | . | 6 | 2.83 | UGCCAAAGGUAGACCUCCACG | | siRNA21 | ShortStack |
| tcc-b1.1r1-127 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1767232-1767823 | . | 18 | 8.50 | UUAAGAUCUGUUGGAACCAUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-128 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1767966-1768764 | . | 65 | 30.70 | CUUCAUGUGACUUUGACAGCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-129 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1768847-1769201 | . | 11 | 5.20 | ACAUUUUGAUUGUUGUGCUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-130 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1814811-1814886 | . | 15 | 7.09 | CAAUACUUUGAUAUUAAAACGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-145 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:1957544-1957703 | . | 8 | 3.78 | UCGUGUCUUAAACUUGUCAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-243 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:3660270-3660290 | - | 5 | 2.36 | AGAAUCCUGAUGAUGCUGCAA | miR172 | siRNA21 | ShortStack |
| tcc-b1.1r1-290 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:4480022-4480143 | + | 7 | 3.31 | UAUAUACUCGUACGAAUUAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-339 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:5947222-5948159 | . | 51 | 24.09 | ACGAUAUGUCUUCACACCUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-345 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:6066618-6066815 | . | 5 | 2.36 | CAAGAUAUGUGGCUAAUGGAGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-355 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:6289680-6289774 | + | 30 | 14.17 | CAGAUAAGCACUAAACACUACUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-432 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:10578968-10579002 | - | 7 | 3.31 | AUCGAUCAGGGUUCUCAAUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-470 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:12357553-12357717 | . | 5 | 2.36 | AUUUUCUUUGAUAGCAGCUCCUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-501 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:14565308-14565490 | + | 7 | 3.31 | CUUUGAUCUGAAGUGAACCAGCUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-506 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:14740423-14740571 | . | 6 | 2.83 | GAGGUUCCGGGUCGUGACAACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-523 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:15493282-15493406 | + | 5 | 2.36 | CCUUGGCGGACUCGGUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-535 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:15967549-15967671 | + | 6 | 2.83 | AUGAUGUGGCAUGUAACAACUUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-540 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:16309643-16309735 | + | 5 | 2.36 | UCCGUGACAUUUUACCCACUCAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-551 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:16553179-16553210 | - | 6 | 2.83 | ACGGCUGUCAGACCUAAUACUAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-663 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:21798450-21798536 | . | 10 | 4.72 | CCGUUUCGAACUCCGCACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-673 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:22023828-22024212 | . | 14 | 6.61 | UUAUCAUUAUAGACAAGCUGAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-674 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:22024309-22024380 | . | 6 | 2.83 | UAUGCCUCCGAUUGUUUUUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-675 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:22024848-22024969 | . | 7 | 3.31 | CUUCGUGAUGUAGUAUCUUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-699 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:22516504-22516654 | . | 5 | 2.36 | UUAUUGUGCUUAAAGAAUCAGUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-703 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:22632463-22632584 | . | 6 | 2.83 | GCUUCCACUUGUAGAAAUCCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-704 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:22632659-22632766 | + | 5 | 2.36 | CUAGUAUAUCCUUCCAUGCAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-745 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:23587910-23588013 | - | 5 | 2.36 | GAGAGUUGCGUGACAGGUAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-770 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:24224453-24224625 | . | 5 | 2.36 | AUGAUGAGUGACACUGACGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-776 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:24257481-24257780 | . | 230 | 108.63 | CGGGAUGAAGAAAUUAGGACG | | siRNA21 | ShortStack |
| tcc-b1.1r1-782 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:24407829-24409349 | . | 90 | 42.51 | UCUCGGAUCUCUUUGACAUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-783 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:24412951-24412990 | - | 5 | 2.36 | UUCUUAGAUCUGUUGGGAUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-808 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:24626640-24626818 | + | 5 | 2.36 | UAACCCUCGUAGCUAAAACUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-810 | Theobroma cacao (Cacao) 1.1 | scaffold_10r:24636487-24636517 | - | 1,941 | 916.77 | UCGGUAAGUUGCUUAGCCUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-12273 | Theobroma cacao (Cacao) 1.1 | scaffold_11:18839-18908 | . | 5 | 2.36 | UUGCAGCGGUUGUCACGGGCUCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-12437 | Theobroma cacao (Cacao) 1.1 | scaffold_139:838-868 | + | 5 | 2.36 | UUUCCUCGGGAAACGUGAAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-12453 | Theobroma cacao (Cacao) 1.1 | scaffold_187:2826-2963 | . | 13 | 6.14 | UUAGAACUAAAGUGGAGUAGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2656 | Theobroma cacao (Cacao) 1.1 | scaffold_2:640432-640605 | - | 15 | 7.09 | AUAGCCUUUGUGACAACAUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2730 | Theobroma cacao (Cacao) 1.1 | scaffold_2:2234876-2234988 | - | 5 | 2.36 | AUGACGGUAGCAACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2740 | Theobroma cacao (Cacao) 1.1 | scaffold_2:2476550-2476838 | + | 9 | 4.25 | GAGAAGGUCUGGAGAAAUAUCUUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-2746 | Theobroma cacao (Cacao) 1.1 | scaffold_2:2676529-2676592 | + | 5 | 2.36 | AUGCCAGUUAUUGUGCUCUGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-2764 | Theobroma cacao (Cacao) 1.1 | scaffold_2:3000660-3000832 | . | 5 | 2.36 | UUUAUUUGUGCUGUGUGGAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-2822 | Theobroma cacao (Cacao) 1.1 | scaffold_2:3883869-3883935 | + | 6 | 2.83 | AAAGGAAAACGUACGAUGACUCCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-3040 | Theobroma cacao (Cacao) 1.1 | scaffold_2:7793210-7793306 | - | 8 | 3.78 | AGAUCUGGCUGGAUCUCAGUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-3047 | Theobroma cacao (Cacao) 1.1 | scaffold_2:8087497-8087714 | . | 16 | 7.56 | UCUGGCUAGAUCUCAGUUAAAUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3070 | Theobroma cacao (Cacao) 1.1 | scaffold_2:8665235-8665385 | - | 5 | 2.36 | AUAUAAAUGAUUGGCUAAUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3161 | Theobroma cacao (Cacao) 1.1 | scaffold_2:10265158-10265276 | . | 43 | 20.31 | UGUACGGCGAAGGAUCUCAGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-3182 | Theobroma cacao (Cacao) 1.1 | scaffold_2:10970271-10970394 | . | 6 | 2.83 | GAGGUCAGUGAGUCUCAAAUUCGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-3218 | Theobroma cacao (Cacao) 1.1 | scaffold_2:11444472-11444535 | + | 7 | 3.31 | GUCAAGGAUUGUAUUUUAUUAAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3225 | Theobroma cacao (Cacao) 1.1 | scaffold_2:11641767-11641960 | + | 5 | 2.36 | CAUGGAUAGCGUGAACCGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3258 | Theobroma cacao (Cacao) 1.1 | scaffold_2:12311029-12311242 | - | 6 | 2.83 | AUAAUUGAUUAUGAUGUGAUUCGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3393 | Theobroma cacao (Cacao) 1.1 | scaffold_2:18978866-18978935 | + | 5 | 2.36 | AGCACUGCAUCAGAACCUGAGAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3411 | Theobroma cacao (Cacao) 1.1 | scaffold_2:21718659-21718793 | + | 5 | 2.36 | UUAAGGAAAGCUGCUGGAAAC | | siRNA21 | ShortStack |
| tcc-b1.1r1-3474 | Theobroma cacao (Cacao) 1.1 | scaffold_2:27706228-27706251 | + | 8 | 3.78 | UGACGGACUCGGUUAGAUGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3492 | Theobroma cacao (Cacao) 1.1 | scaffold_2:29240795-29240859 | - | 7 | 3.31 | GUCCGGGAAAGGCAAAGGAAUUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3555 | Theobroma cacao (Cacao) 1.1 | scaffold_2:31769396-31769494 | . | 5 | 2.36 | AUUCGGACUAAGUUUGCAAAA | | siRNA21 | ShortStack |
| tcc-b1.1r1-3624 | Theobroma cacao (Cacao) 1.1 | scaffold_2:33287309-33287448 | - | 5 | 2.36 | CUGCCAGGCGCCACCUUCACC | | siRNA21 | ShortStack |
| tcc-b1.1r1-3655 | Theobroma cacao (Cacao) 1.1 | scaffold_2:33958650-33958681 | + | 6 | 2.83 | AACUCCGGACUUGUUAAGGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3737 | Theobroma cacao (Cacao) 1.1 | scaffold_2:35874879-35875010 | - | 7 | 3.31 | CGACGGAUCUAAAAUUAAUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3748 | Theobroma cacao (Cacao) 1.1 | scaffold_2:36059681-36059724 | + | 125 | 59.04 | UUCGUUGUCUGUUCGACCUUG | miR858 | siRNA21 | ShortStack |
| tcc-b1.1r1-3749 | Theobroma cacao (Cacao) 1.1 | scaffold_2:36061966-36061986 | + | 7 | 3.31 | AGGUCGAACUGAUAGCGAAUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-3853 | Theobroma cacao (Cacao) 1.1 | scaffold_2:37929464-37929615 | . | 5 | 2.36 | AUAAGCCACCAAACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-3860 | Theobroma cacao (Cacao) 1.1 | scaffold_2:38098375-38098506 | + | 5 | 2.36 | GAUGUCAUCUCUGUUCUUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-3939 | Theobroma cacao (Cacao) 1.1 | scaffold_2:39888556-39888655 | + | 8 | 3.78 | UCUUUGUUUUCUGUUUCGAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4003 | Theobroma cacao (Cacao) 1.1 | scaffold_2:40851398-40851425 | + | 17 | 8.03 | UGUGUUCUCAGGUCACCCCUU | miR398 | siRNA21 | ShortStack |
| tcc-b1.1r1-4004 | Theobroma cacao (Cacao) 1.1 | scaffold_2:40855970-40856106 | . | 6 | 2.83 | CUUGUUCCAGCUCUGCAAAAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-4049 | Theobroma cacao (Cacao) 1.1 | scaffold_2:41723076-41723189 | + | 117 | 55.26 | UGAAGUGUUUGGGGGAACUCU | miR395 | siRNA21 | ShortStack |
| tcc-b1.1r1-4050 | Theobroma cacao (Cacao) 1.1 | scaffold_2:41727044-41727138 | + | 103 | 48.65 | UGAAGUGUUUGGGGGAACUCC | miR395 | siRNA21 | ShortStack |
| tcc-b1.1r1-4053 | Theobroma cacao (Cacao) 1.1 | scaffold_2:41929959-41930251 | + | 7 | 3.31 | GCACUGCAGAAGUUACACGGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-4055 | Theobroma cacao (Cacao) 1.1 | scaffold_2:41976377-41976867 | . | 1,008 | 476.10 | UCCGACUGUCCAAAUAUGGGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-4114 | Theobroma cacao (Cacao) 1.1 | scaffold_3:670218-670659 | . | 1,270 | 599.85 | AUGACUACGAAAGCUCUUCUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4120 | Theobroma cacao (Cacao) 1.1 | scaffold_3:703472-703614 | . | 6 | 2.83 | CAUGAUAGAAAUCUUUGAACCCAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4133 | Theobroma cacao (Cacao) 1.1 | scaffold_3:819720-819946 | + | 5 | 2.36 | AGCAUCUAGCUCGUGGACCCUAGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-4189 | Theobroma cacao (Cacao) 1.1 | scaffold_3:1833765-1833854 | - | 5 | 2.36 | UUUAUCGAUUUCUCUGUUUGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-4224 | Theobroma cacao (Cacao) 1.1 | scaffold_3:2365008-2365100 | . | 6 | 2.83 | GUUCCGGAUCGUGACAACCCACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-4273 | Theobroma cacao (Cacao) 1.1 | scaffold_3:4032851-4032955 | - | 5 | 2.36 | AUUCCUAGACUGUGAAGCUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-4276 | Theobroma cacao (Cacao) 1.1 | scaffold_3:4147158-4147467 | - | 26,174 | 12,362.47 | UUUGGAUUGAAGGGAGCUCUA | miR159 | siRNA21 | ShortStack |
| tcc-b1.1r1-4287 | Theobroma cacao (Cacao) 1.1 | scaffold_3:4745948-4746063 | - | 5 | 2.36 | UUCGGGGUAAAAAAUGUCUGUCG | | siRNA21 | ShortStack |
| tcc-b1.1r1-4293 | Theobroma cacao (Cacao) 1.1 | scaffold_3:4948035-4948213 | . | 5 | 2.36 | UCAUACUGGUGGGAUCCGGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4330 | Theobroma cacao (Cacao) 1.1 | scaffold_3:6080612-6080777 | + | 7 | 3.31 | AAACGUGAAAGAACUCUUAGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-4331 | Theobroma cacao (Cacao) 1.1 | scaffold_3:6081138-6081223 | . | 5 | 2.36 | AAAUCAUUCGUAGACUAACCUAAC | | siRNA21 | ShortStack |
| tcc-b1.1r1-4382 | Theobroma cacao (Cacao) 1.1 | scaffold_3:8353995-8354180 | + | 5 | 2.36 | UUUCUUGAGACAUUGUUGAUCUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-4439 | Theobroma cacao (Cacao) 1.1 | scaffold_3:13787749-13787810 | + | 5 | 2.36 | CUUAAUUCUUGUAGUAAUGCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-4445 | Theobroma cacao (Cacao) 1.1 | scaffold_3:14472145-14472168 | - | 9 | 4.25 | UGACGGACUCGGUUAGAUGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4462 | Theobroma cacao (Cacao) 1.1 | scaffold_3:15688043-15688141 | - | 5 | 2.36 | UUCUAUCACAGCGAAAACUCUUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-4467 | Theobroma cacao (Cacao) 1.1 | scaffold_3:16679152-16679272 | - | 5 | 2.36 | UAUGACUAUUAGACACAAUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4479 | Theobroma cacao (Cacao) 1.1 | scaffold_3:17325279-17325463 | + | 5 | 2.36 | UGACUGUGAAGAUGAUUACGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4498 | Theobroma cacao (Cacao) 1.1 | scaffold_3:18070094-18070126 | - | 5 | 2.36 | GUCUGGGAUGAGUAGUACUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-4527 | Theobroma cacao (Cacao) 1.1 | scaffold_3:18813603-18813744 | + | 6 | 2.83 | AUAGCGUAGAAUCAGAAGAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4532 | Theobroma cacao (Cacao) 1.1 | scaffold_3:18922287-18922455 | + | 5 | 2.36 | GACUGUCGACGAGAGUUUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-4538 | Theobroma cacao (Cacao) 1.1 | scaffold_3:19040258-19040330 | - | 5 | 2.36 | CUAAAUAGGCUAAACAACCCAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4575 | Theobroma cacao (Cacao) 1.1 | scaffold_3:19880791-19881096 | . | 13 | 6.14 | UUGUAGUCAUGCUGGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-4577 | Theobroma cacao (Cacao) 1.1 | scaffold_3:19911966-19912099 | + | 5 | 2.36 | CGAUAAACCGGUCUACGUAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4774 | Theobroma cacao (Cacao) 1.1 | scaffold_3:24235482-24235762 | . | 6 | 2.83 | UGAUCAAACUUUAGCAGCUGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-4807 | Theobroma cacao (Cacao) 1.1 | scaffold_3:24680405-24680621 | + | 5 | 2.36 | CUUGCUGUGGUAUCAAACUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-4810 | Theobroma cacao (Cacao) 1.1 | scaffold_3:24778217-24778522 | . | 82 | 38.73 | UCAUUAUCUGAACCAACUUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5001 | Theobroma cacao (Cacao) 1.1 | scaffold_3:28905544-28905643 | - | 528 | 249.38 | UCGGACCAGGCUUCAUUCCCC | miR166 | siRNA21 | ShortStack |
| tcc-b1.1r1-5005 | Theobroma cacao (Cacao) 1.1 | scaffold_3:28974554-28974643 | . | 5 | 2.36 | AAGUAUUACACCCGAACAUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5080 | Theobroma cacao (Cacao) 1.1 | scaffold_3:30215969-30216039 | . | 6 | 2.83 | AAGAACGAAAACUGAUCCACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5084 | Theobroma cacao (Cacao) 1.1 | scaffold_3:30424843-30425315 | . | 1,824 | 861.51 | CAAGUUUGCUGUGGCACAGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5226 | Theobroma cacao (Cacao) 1.1 | scaffold_3:33556280-33556392 | - | 5 | 2.36 | GGUGCUGUAGAAGUUGAGGAUAGUUGUGACAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-5260 | Theobroma cacao (Cacao) 1.1 | scaffold_3:34314295-34314323 | + | 5 | 2.36 | GACGUGACAUGCUGAUAUAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-12351 | Theobroma cacao (Cacao) 1.1 | scaffold_31:51994-52448 | . | 42 | 19.84 | UUCCGAAUUUGAAGACCAUCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-12352 | Theobroma cacao (Cacao) 1.1 | scaffold_31:55788-56518 | . | 50 | 23.62 | CUGAUGAGCUGGAGU | miR2118 | siRNA21 | ShortStack |
| tcc-b1.1r1-12353 | Theobroma cacao (Cacao) 1.1 | scaffold_31:85068-85329 | . | 10 | 4.72 | UUUGAACUUCCAUAAUUGCCG | | siRNA21 | ShortStack |
| tcc-b1.1r1-12354 | Theobroma cacao (Cacao) 1.1 | scaffold_31:86302-86401 | . | 5 | 2.36 | UGUUGUGACUUCAAAGAUCUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-5272 | Theobroma cacao (Cacao) 1.1 | scaffold_4:320600-320895 | . | 10 | 4.72 | CCGGUUUUGCUAAGUAUGGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5288 | Theobroma cacao (Cacao) 1.1 | scaffold_4:668948-669312 | . | 10 | 4.72 | UUGGAUCUAUGGCUGCCUGAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5340 | Theobroma cacao (Cacao) 1.1 | scaffold_4:1728465-1728650 | . | 8 | 3.78 | UUGCUGCACCACCACCACUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5356 | Theobroma cacao (Cacao) 1.1 | scaffold_4:2103019-2103181 | . | 7 | 3.31 | GAUGUGAAACGUUGACUUCUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5361 | Theobroma cacao (Cacao) 1.1 | scaffold_4:2277695-2277805 | - | 5 | 2.36 | AAACUCUCGGGUGUAUCUAGUGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5366 | Theobroma cacao (Cacao) 1.1 | scaffold_4:2355658-2355794 | . | 7 | 3.31 | AAGGGUAUGGAUAUUCUGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5375 | Theobroma cacao (Cacao) 1.1 | scaffold_4:2531789-2531814 | + | 12 | 5.67 | UUGAGCCGUGCCAAUAUCACA | miR171 | siRNA21 | ShortStack |
| tcc-b1.1r1-5393 | Theobroma cacao (Cacao) 1.1 | scaffold_4:2848127-2848307 | + | 5 | 2.36 | GAGAUUCAUUGAGCAAACUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5395 | Theobroma cacao (Cacao) 1.1 | scaffold_4:2880419-2880440 | + | 6 | 2.83 | UAGCCAAGGAUGAGUUGCCUG | miR169 | siRNA21 | ShortStack |
| tcc-b1.1r1-5399 | Theobroma cacao (Cacao) 1.1 | scaffold_4:2918547-2919056 | . | 111 | 52.43 | CGGAGGCUGCAAGACACUUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5416 | Theobroma cacao (Cacao) 1.1 | scaffold_4:3318790-3318842 | . | 8 | 3.78 | UACGUCCACGGAGUGAAACUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5452 | Theobroma cacao (Cacao) 1.1 | scaffold_4:3856708-3856815 | . | 8 | 3.78 | CUGAUGAAGAUGAAUUGACAUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5458 | Theobroma cacao (Cacao) 1.1 | scaffold_4:4067535-4067673 | . | 6 | 2.83 | CCGCCUACUGUAGCAAUUAGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5461 | Theobroma cacao (Cacao) 1.1 | scaffold_4:4101265-4101577 | . | 26 | 12.28 | CGUGUCUCUGGACUAUCAUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5466 | Theobroma cacao (Cacao) 1.1 | scaffold_4:4186795-4186898 | - | 6 | 2.83 | ACAAUCGCCGUGACGUCCCGAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5473 | Theobroma cacao (Cacao) 1.1 | scaffold_4:4433688-4433843 | . | 7 | 3.31 | UUCUGUAAUUGUUGUAGAAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5507 | Theobroma cacao (Cacao) 1.1 | scaffold_4:7717968-7718024 | - | 6 | 2.83 | ACAUACUUCGUUUGGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5508 | Theobroma cacao (Cacao) 1.1 | scaffold_4:7754629-7754741 | . | 6 | 2.83 | AUUCAAGAUCUAAUCUGGCUACAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5544 | Theobroma cacao (Cacao) 1.1 | scaffold_4:10532334-10532437 | + | 5 | 2.36 | UUCCGAUCACAAUUGAACCUACGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5628 | Theobroma cacao (Cacao) 1.1 | scaffold_4:15670721-15670895 | . | 6 | 2.83 | CAACUGGGUGCCUGAUUGUCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5634 | Theobroma cacao (Cacao) 1.1 | scaffold_4:15807182-15807295 | . | 5 | 2.36 | AAUGUAGAAUCUGUGACAACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5637 | Theobroma cacao (Cacao) 1.1 | scaffold_4:15993563-15993771 | - | 5 | 2.36 | AAACAAUUUUUGUGACGUAAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-5642 | Theobroma cacao (Cacao) 1.1 | scaffold_4:16323179-16323384 | . | 5 | 2.36 | AUGAAAUCAGGAUUUUGGCAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5655 | Theobroma cacao (Cacao) 1.1 | scaffold_4:16675464-16675646 | + | 13 | 6.14 | UUCUCAAACUCUGAAUUACCAUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5666 | Theobroma cacao (Cacao) 1.1 | scaffold_4:16937537-16937699 | + | 5 | 2.36 | UACGAGGAUAAUACUGCUUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5686 | Theobroma cacao (Cacao) 1.1 | scaffold_4:17174809-17174935 | + | 7 | 3.31 | CGUGGUAAUAUUGACGUGACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-5736 | Theobroma cacao (Cacao) 1.1 | scaffold_4:18016763-18016845 | + | 69 | 32.59 | UGUUUUGAUAGAUUCUGUCUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5761 | Theobroma cacao (Cacao) 1.1 | scaffold_4:18752176-18752302 | . | 5 | 2.36 | AUUGGAGGGCCCAAAAGACGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-5815 | Theobroma cacao (Cacao) 1.1 | scaffold_4:19957038-19957360 | . | 13 | 6.14 | GUGUGGCCUUGAUGAGAACAUCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-5835 | Theobroma cacao (Cacao) 1.1 | scaffold_4:20706486-20706630 | . | 6 | 2.83 | GUAUAAAAUGACAGAUAACAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5855 | Theobroma cacao (Cacao) 1.1 | scaffold_4:21093831-21093899 | . | 6 | 2.83 | CUGUGGUAGCUUGUAGAUACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-5871 | Theobroma cacao (Cacao) 1.1 | scaffold_4:21328769-21328853 | . | 5 | 2.36 | GCGAAGACGGGUAUUCCUCAAAAA | | siRNA21 | ShortStack |
| tcc-b1.1r1-5877 | Theobroma cacao (Cacao) 1.1 | scaffold_4:21526719-21526838 | + | 5 | 2.36 | AACGGUCACUGCAGUGGUGUGAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5885 | Theobroma cacao (Cacao) 1.1 | scaffold_4:21698376-21698443 | - | 6 | 2.83 | AUCUAAUUGUGUCUGAUACGUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5891 | Theobroma cacao (Cacao) 1.1 | scaffold_4:21839256-21839484 | - | 18 | 8.50 | UAUCGUUUGAUGUAAAACAUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5893 | Theobroma cacao (Cacao) 1.1 | scaffold_4:21863048-21863111 | . | 7 | 3.31 | UAUAACUGUGCUCCCUUUCGAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5895 | Theobroma cacao (Cacao) 1.1 | scaffold_4:21863935-21864375 | . | 22 | 10.39 | ACACUGCCAGAAUCAAUAUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5897 | Theobroma cacao (Cacao) 1.1 | scaffold_4:21881191-21881412 | . | 8 | 3.78 | UUUGCUUGUAUUGGAUGAUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5912 | Theobroma cacao (Cacao) 1.1 | scaffold_4:22071585-22071739 | . | 11 | 5.20 | UCUGCUAUGCUUCCGAUUCGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5914 | Theobroma cacao (Cacao) 1.1 | scaffold_4:22111966-22112037 | - | 6 | 2.83 | CUGGAUGACGGAAUAGAGAAA | | siRNA21 | ShortStack |
| tcc-b1.1r1-5928 | Theobroma cacao (Cacao) 1.1 | scaffold_4:22310075-22310189 | - | 5 | 2.36 | AACUACAUUAACGUCUGGAUCUCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5943 | Theobroma cacao (Cacao) 1.1 | scaffold_4:22525006-22525285 | . | 5 | 2.36 | AAUAAGUCUAACUAUAGUAACAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-5958 | Theobroma cacao (Cacao) 1.1 | scaffold_4:22728255-22728456 | - | 6 | 2.83 | UAUCAGUUCGGACCACAAAUUACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-5961 | Theobroma cacao (Cacao) 1.1 | scaffold_4:22755396-22755674 | . | 131 | 61.87 | UAUAUAGGUAGACCUUCCGGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-5966 | Theobroma cacao (Cacao) 1.1 | scaffold_4:22840880-22841248 | . | 1,608 | 759.49 | CGGAAGGUCUCCCCAUGUAGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6001 | Theobroma cacao (Cacao) 1.1 | scaffold_4:23802502-23802525 | - | 5 | 2.36 | GCAGAUGACUCUGACAAAGGCUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6034 | Theobroma cacao (Cacao) 1.1 | scaffold_4:24474316-24474427 | . | 7 | 3.31 | GAGACAGAUUUUCACCGAAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6037 | Theobroma cacao (Cacao) 1.1 | scaffold_4:24475003-24475272 | . | 5 | 2.36 | AAGGGCGGGCUAGAAUAGGAUAA | | siRNA21 | ShortStack |
| tcc-b1.1r1-6062 | Theobroma cacao (Cacao) 1.1 | scaffold_4:24982492-24982719 | + | 235 | 111.00 | UUCCAUCAAGAUUCUGAGCAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6063 | Theobroma cacao (Cacao) 1.1 | scaffold_4:24989304-24989408 | + | 114 | 53.84 | CAAGUUGCAGCUGAACAGACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6100 | Theobroma cacao (Cacao) 1.1 | scaffold_4:25788378-25788963 | . | 739 | 349.04 | UCGGUUUAGAUUUUGGAUUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6102 | Theobroma cacao (Cacao) 1.1 | scaffold_4:25789467-25789673 | . | 107 | 50.54 | UUUGACGAGCCAUUAGUAGAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6103 | Theobroma cacao (Cacao) 1.1 | scaffold_4:25789776-25789884 | . | 23 | 10.86 | AUGAGGGCUUGGACUUGUCUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6104 | Theobroma cacao (Cacao) 1.1 | scaffold_4:25789979-25790083 | . | 16 | 7.56 | AUCAUGGUUAUUAGGAGCUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-6106 | Theobroma cacao (Cacao) 1.1 | scaffold_4:25792027-25792336 | . | 58 | 27.39 | UGGAACACCAAAGACCUCUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6107 | Theobroma cacao (Cacao) 1.1 | scaffold_4:25792666-25792774 | . | 10 | 4.72 | CUUGAUUCUCCGUUAUUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6108 | Theobroma cacao (Cacao) 1.1 | scaffold_4:25792859-25793039 | . | 15 | 7.09 | UUACUUUUGUUGAUGACGAUGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-6109 | Theobroma cacao (Cacao) 1.1 | scaffold_4:25793219-25793295 | . | 6 | 2.83 | UGUGUACUGCUCUGUUAUAAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6174 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27111058-27111939 | . | 200 | 94.46 | UCCAUUCUAGGACGUAAUCUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6175 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27112039-27112220 | - | 14 | 6.61 | UCUGGUGGCUUGGAAUUCUCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-6176 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27112521-27112585 | . | 9 | 4.25 | ACUUGACGCUGCAAGGACUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-6177 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27112683-27112755 | . | 9 | 4.25 | CGAGGAUGGAUAUUAACAUGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6178 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27112846-27113055 | . | 11 | 5.20 | CGAUCUCGUGGAUCUUUGCCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-6179 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27113384-27113735 | . | 12 | 5.67 | UUCCGCAACUCAUUCUUUAGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-6203 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27667185-27667592 | . | 21 | 9.92 | UCUCUGUGUUGACAAUGAUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6204 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27668425-27668642 | . | 5 | 2.36 | UGAGUGAAAGAGGUGUAAAAC | | siRNA21 | ShortStack |
| tcc-b1.1r1-6211 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27863242-27863329 | . | 6 | 2.83 | UCUGAAGAAUUCGAUACUUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-6212 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27863404-27863596 | + | 7 | 3.31 | UAUGAGGACUGUUCCAACUCAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6213 | Theobroma cacao (Cacao) 1.1 | scaffold_4:27864000-27864119 | + | 5 | 2.36 | UUUGUGUCUGGAGAAUUUUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6243 | Theobroma cacao (Cacao) 1.1 | scaffold_4:28214139-28214221 | + | 5 | 2.36 | UUGUUCUGCCGUAGUUGAUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-6263 | Theobroma cacao (Cacao) 1.1 | scaffold_4:28735842-28735960 | . | 7 | 3.31 | UAAUGUUGGCAUGGCUGAUGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6272 | Theobroma cacao (Cacao) 1.1 | scaffold_4:28892669-28892763 | . | 5 | 2.36 | CAUUUUUAGUAUUCAUGGACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6446 | Theobroma cacao (Cacao) 1.1 | scaffold_4:32240909-32241002 | + | 5 | 2.36 | UUGAUCUGAAAUUGUUUUGUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6451 | Theobroma cacao (Cacao) 1.1 | scaffold_4:32283811-32284129 | + | 99 | 46.76 | UAAACCAACUCUGCAGACUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-6459 | Theobroma cacao (Cacao) 1.1 | scaffold_4:32488159-32488322 | . | 7 | 3.31 | AAGAUUGUUCGUCAAGCUUGGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6489 | Theobroma cacao (Cacao) 1.1 | scaffold_4:33007249-33007954 | . | 4,890 | 2,309.64 | AAAACAAGGAACACCGAACGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6517 | Theobroma cacao (Cacao) 1.1 | scaffold_5:228189-228219 | - | 72 | 34.01 | CAUGUGCCCCUCUUCCCCAUC | miR164 | siRNA21 | ShortStack |
| tcc-b1.1r1-6547 | Theobroma cacao (Cacao) 1.1 | scaffold_5:663351-663597 | + | 94 | 44.40 | UAUAUAAUUGAUCUCUACAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6571 | Theobroma cacao (Cacao) 1.1 | scaffold_5:989361-989576 | - | 6 | 2.83 | UCGUUGACCAAGUAUGAGAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6594 | Theobroma cacao (Cacao) 1.1 | scaffold_5:1220120-1220476 | - | 554 | 261.67 | UAUUGGUUGGUAGUAAAACGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6595 | Theobroma cacao (Cacao) 1.1 | scaffold_5:1221273-1221650 | - | 355 | 167.67 | UAAACGACUCAUGAACAAUCG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6596 | Theobroma cacao (Cacao) 1.1 | scaffold_5:1222156-1222504 | . | 102 | 48.18 | UAAAGAAACUUGAAACAGAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6618 | Theobroma cacao (Cacao) 1.1 | scaffold_5:1789231-1789342 | + | 5 | 2.36 | UGAACUGACUAAAUUCUCUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6642 | Theobroma cacao (Cacao) 1.1 | scaffold_5:2095584-2095665 | + | 530 | 250.33 | UGAAGUGUUUGGGGGAACUCC | miR395 | siRNA21 | ShortStack |
| tcc-b1.1r1-6655 | Theobroma cacao (Cacao) 1.1 | scaffold_5:2336069-2336138 | . | 5 | 2.36 | AAUUCGAGACUUAGACACCAACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-6714 | Theobroma cacao (Cacao) 1.1 | scaffold_5:3339883-3339909 | . | 13 | 6.14 | AGGUGCAGAUGCAGGUGCAGA | miR530 | siRNA21 | ShortStack |
| tcc-b1.1r1-6739 | Theobroma cacao (Cacao) 1.1 | scaffold_5:3921973-3922151 | . | 8 | 3.78 | CAGAUCUAGCACUCAACGGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6748 | Theobroma cacao (Cacao) 1.1 | scaffold_5:3975366-3975651 | . | 40 | 18.89 | CCAGAUCUGGCACUCAACGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6808 | Theobroma cacao (Cacao) 1.1 | scaffold_5:5129853-5129985 | + | 7 | 3.31 | GCGUGACUUGUGCAAUUCAUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-6879 | Theobroma cacao (Cacao) 1.1 | scaffold_5:6982263-6982325 | - | 5 | 2.36 | CUCUAGGACUGCUACAGUGUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6957 | Theobroma cacao (Cacao) 1.1 | scaffold_5:11102051-11102140 | . | 7 | 3.31 | AUCGGGCCCGUGACAACCACC | | siRNA21 | ShortStack |
| tcc-b1.1r1-6974 | Theobroma cacao (Cacao) 1.1 | scaffold_5:12282289-12282312 | - | 7 | 3.31 | AUCAAAUAAAGACAUAGUACCCGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-6979 | Theobroma cacao (Cacao) 1.1 | scaffold_5:12536757-12536946 | - | 9 | 4.25 | AUGUGUCUAGGAGGAGAGCCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-6997 | Theobroma cacao (Cacao) 1.1 | scaffold_5:13578251-13578377 | . | 5 | 2.36 | AAGGCUCUAGCAUCAAUUCCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-7072 | Theobroma cacao (Cacao) 1.1 | scaffold_5:19184652-19184839 | + | 5 | 2.36 | UUUCGUCGUAUGUUUUCUCACAUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7144 | Theobroma cacao (Cacao) 1.1 | scaffold_5:23958991-23959107 | . | 5 | 2.36 | UCACGACGGUUGUCACGAGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7157 | Theobroma cacao (Cacao) 1.1 | scaffold_5:24630875-24631015 | . | 5 | 2.36 | GUGCUGGUGGGUUUUCUGACGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7176 | Theobroma cacao (Cacao) 1.1 | scaffold_5:24887714-24887959 | . | 5 | 2.36 | AGAGGAAGUUUGCUAAAGUAGAGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7198 | Theobroma cacao (Cacao) 1.1 | scaffold_5:25731367-25731436 | + | 6 | 2.83 | AACUCCGAACUUGUUAAGACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7235 | Theobroma cacao (Cacao) 1.1 | scaffold_5:27145694-27145817 | + | 8 | 3.78 | GGCGGAUCUGGGAGAAUAUCCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7241 | Theobroma cacao (Cacao) 1.1 | scaffold_5:27270643-27270720 | . | 5 | 2.36 | CCAAACGAGGAAAGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7260 | Theobroma cacao (Cacao) 1.1 | scaffold_5:27618324-27618408 | - | 5 | 2.36 | UUCUGUCCGGAAAACUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7261 | Theobroma cacao (Cacao) 1.1 | scaffold_5:27618492-27618580 | + | 6 | 2.83 | UUCCAAUCUAGAACAAUCAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7264 | Theobroma cacao (Cacao) 1.1 | scaffold_5:27738296-27738471 | - | 6 | 2.83 | UGGAGACUCUACCUGAAUUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7265 | Theobroma cacao (Cacao) 1.1 | scaffold_5:27738741-27738819 | . | 5 | 2.36 | CAAAAUGAUAACACUCCGGUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7267 | Theobroma cacao (Cacao) 1.1 | scaffold_5:27739860-27741155 | . | 119 | 56.21 | ACAUGAUCUCUGCAGUUCCAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7268 | Theobroma cacao (Cacao) 1.1 | scaffold_5:27741698-27743071 | . | 559 | 264.03 | UCCGGAUUUCUAUGAAGACAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7306 | Theobroma cacao (Cacao) 1.1 | scaffold_5:28612353-28612442 | + | 6 | 2.83 | GUGGAGUCGCCAUCUGUCGUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7309 | Theobroma cacao (Cacao) 1.1 | scaffold_5:28675625-28675720 | - | 7 | 3.31 | UGAACGAUUGGUCGGUAGUGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7315 | Theobroma cacao (Cacao) 1.1 | scaffold_5:28834526-28834680 | . | 6 | 2.83 | UAGUAAAAAUAUUGGUGGCGACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7330 | Theobroma cacao (Cacao) 1.1 | scaffold_5:29108385-29108436 | . | 6 | 2.83 | UUGACUACUGACUAGACUUACGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7354 | Theobroma cacao (Cacao) 1.1 | scaffold_5:29523247-29523377 | . | 5 | 2.36 | ACACGAUACGUUAACAUGAUACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7369 | Theobroma cacao (Cacao) 1.1 | scaffold_5:29710927-29711065 | . | 5 | 2.36 | UUCUUGUGUCGUAUUAACGUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7397 | Theobroma cacao (Cacao) 1.1 | scaffold_5:30166127-30166297 | + | 5 | 2.36 | AUUCUCGAACUUGCACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7410 | Theobroma cacao (Cacao) 1.1 | scaffold_5:30704236-30704387 | + | 6 | 2.83 | CUUCUAUUCUCUUUGUAGUUAAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7418 | Theobroma cacao (Cacao) 1.1 | scaffold_5:30863165-30863410 | - | 68 | 32.12 | UCGUAAUACUGUUGAUACUGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7419 | Theobroma cacao (Cacao) 1.1 | scaffold_5:30863719-30863993 | - | 113 | 53.37 | GUUGAUACUGGAAGGAACUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7420 | Theobroma cacao (Cacao) 1.1 | scaffold_5:30901064-30901187 | . | 5 | 2.36 | CAAUGUGUGGAUUUCGGUUUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7423 | Theobroma cacao (Cacao) 1.1 | scaffold_5:30951574-30952115 | . | 21 | 9.92 | GUUUUGAGCCUGAUAUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7424 | Theobroma cacao (Cacao) 1.1 | scaffold_5:30952192-30952416 | - | 21 | 9.92 | UUUUUGGGAAAAUGUUGAAGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-7441 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31297373-31297550 | . | 8 | 3.78 | CGUGUCAGCCGAGUAAUCUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-7479 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31688130-31688313 | . | 21 | 9.92 | CAAUCUACUAUCUCAAACUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7481 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31690066-31690197 | + | 5 | 2.36 | CCAAUGUCUCACUGAACACGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-7482 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31690302-31690809 | . | 27 | 12.75 | UGCGCUGGAAGACAUAACCAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7483 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31690910-31691017 | . | 6 | 2.83 | UUUGUAGUUUAAUUGGUCAUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7484 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31691300-31691608 | . | 34 | 16.06 | GAUUAGAUCUCGAGGAAGUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7486 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31716126-31716350 | . | 17 | 8.03 | CAAAGAUCUUCACCAACUCGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7487 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31718812-31719238 | . | 45 | 21.25 | UAAAAAUCUUGUAUCUGUCCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7488 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31719599-31719929 | . | 8 | 3.78 | CGCUGUUAUCCCUUUGCUUCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7490 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31745264-31745448 | . | 9 | 4.25 | GGAUGGAUUGGAGCAGCCGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7491 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31747749-31747869 | . | 14 | 6.61 | CAUCUUGUCUUCGGAGCUAA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7492 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31748625-31749674 | . | 278 | 131.31 | UUGUGAUCUGCAGCCUACAGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-7495 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31763428-31763824 | . | 11 | 5.20 | UGGUAUCCCUGUGAAGUUCGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7496 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31782933-31782983 | + | 9 | 4.25 | UGAGAAUCUAGAGGACCUGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7497 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31786182-31786395 | . | 9 | 4.25 | UGCUGAGUUGAAUAAUGGUGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7498 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31786480-31786868 | . | 12 | 5.67 | UUGGUAGUGAAAGAAGAAAUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7499 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31786943-31787129 | + | 6 | 2.83 | AAAGGAAAGAUGUGAACACUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-7500 | Theobroma cacao (Cacao) 1.1 | scaffold_5:31787258-31787673 | . | 36 | 17.00 | AGGGCUUUGAGAAACAAACGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7519 | Theobroma cacao (Cacao) 1.1 | scaffold_5:32136306-32136411 | . | 5 | 2.36 | GAGGGAAUCUGUGAUACGUCG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7532 | Theobroma cacao (Cacao) 1.1 | scaffold_5:32527323-32527555 | . | 8 | 3.78 | GAGGGAACCUGCAGCAGGGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-7583 | Theobroma cacao (Cacao) 1.1 | scaffold_5:33849130-33849372 | . | 12 | 5.67 | ACUCUUACAAGAGUAGAUCGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7621 | Theobroma cacao (Cacao) 1.1 | scaffold_5:34385439-34385690 | - | 13 | 6.14 | AUGUGUGCAUGUGUCUGAAGCAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7622 | Theobroma cacao (Cacao) 1.1 | scaffold_5:34386132-34386233 | . | 114 | 53.84 | UGGCAAAAGGAGAGGCUGGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7671 | Theobroma cacao (Cacao) 1.1 | scaffold_5:35217232-35219435 | . | 499 | 235.69 | AUGGACAAAACAUUGAGAUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7672 | Theobroma cacao (Cacao) 1.1 | scaffold_5:35220118-35220207 | + | 7 | 3.31 | UGGAAGAAGUAGUAGUUGCAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7716 | Theobroma cacao (Cacao) 1.1 | scaffold_5:36071851-36072267 | . | 83 | 39.20 | CUGGCUGAGACCCUUGAUCUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-7759 | Theobroma cacao (Cacao) 1.1 | scaffold_5:36581575-36581804 | . | 5 | 2.36 | UCCAUGAUGAGUCGUGCAGAUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-7763 | Theobroma cacao (Cacao) 1.1 | scaffold_5:36679717-36680112 | + | 35 | 16.53 | UUCGGAUAUUGGGUUUUCGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7803 | Theobroma cacao (Cacao) 1.1 | scaffold_5:37567011-37567226 | . | 8 | 3.78 | CCCCCUCGCCGGGUUGUCCAAUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-7839 | Theobroma cacao (Cacao) 1.1 | scaffold_5:38659907-38659994 | . | 10 | 4.72 | CGCGACGUCUCGGUAGACAUUCG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7843 | Theobroma cacao (Cacao) 1.1 | scaffold_5:38673306-38673494 | . | 5 | 2.36 | GAGUUGUUGGGUCUAAGACUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7851 | Theobroma cacao (Cacao) 1.1 | scaffold_5:38791466-38792645 | . | 174 | 82.18 | CUAGUGCGGCUAGUAGAUUGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7888 | Theobroma cacao (Cacao) 1.1 | scaffold_5:39690864-39690949 | + | 7 | 3.31 | UACUGCAAACGUGGUUGGCGAUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7897 | Theobroma cacao (Cacao) 1.1 | scaffold_5:39827196-39828487 | . | 169 | 79.82 | UGUUGAGACAAAUGGACUUAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7898 | Theobroma cacao (Cacao) 1.1 | scaffold_5:39829992-39831099 | . | 258 | 121.86 | UUUAGGAAAAAUGUUGAAACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7945 | Theobroma cacao (Cacao) 1.1 | scaffold_5:40346150-40346288 | + | 5 | 2.36 | AUAUACGCAACUAUUGAGUCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-12484 | Theobroma cacao (Cacao) 1.1 | scaffold_514:467-664 | . | 7 | 3.31 | UCAGGAGGAGAUAGGAAUGAAGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7953 | Theobroma cacao (Cacao) 1.1 | scaffold_6:83100-83259 | . | 6 | 2.83 | CGGUUCGGUUUCGGUUAGUUUCAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-7985 | Theobroma cacao (Cacao) 1.1 | scaffold_6:688450-688558 | + | 5 | 2.36 | UAUGUCAUUUUCAUGCUUUGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-7986 | Theobroma cacao (Cacao) 1.1 | scaffold_6:688671-688911 | . | 9 | 4.25 | CCAUCUGCAGAUGCUUGAAGGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-7998 | Theobroma cacao (Cacao) 1.1 | scaffold_6:912977-913204 | . | 5 | 2.36 | ACAACAUAAGUAUUGUCGACGGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8066 | Theobroma cacao (Cacao) 1.1 | scaffold_6:2223109-2223284 | - | 6 | 2.83 | UUUACCUCGGAUAGAUGAUCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-8085 | Theobroma cacao (Cacao) 1.1 | scaffold_6:2467332-2467394 | . | 15 | 7.09 | UUAAACCGGUCUACAAUUUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8090 | Theobroma cacao (Cacao) 1.1 | scaffold_6:2509157-2509208 | . | 5 | 2.36 | GAAGACUUUGAUGAUAUGCUAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8100 | Theobroma cacao (Cacao) 1.1 | scaffold_6:2612670-2612778 | . | 1,162 | 548.83 | UUCCACAGCUUUCUUGAACUU | miR396 | siRNA21 | ShortStack |
| tcc-b1.1r1-8123 | Theobroma cacao (Cacao) 1.1 | scaffold_6:2920000-2920111 | + | 6 | 2.83 | UAAUGCACCAACCAAUGAGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8245 | Theobroma cacao (Cacao) 1.1 | scaffold_6:6464960-6465099 | . | 8 | 3.78 | AAGAGUUCUCUGUCUUCGGACUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8292 | Theobroma cacao (Cacao) 1.1 | scaffold_6:8227094-8227123 | - | 5 | 2.36 | AUUUCUUAAAACUUUGACUCGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-8294 | Theobroma cacao (Cacao) 1.1 | scaffold_6:8264395-8264458 | . | 7 | 3.31 | CUAAUCUCAUAUCAAAGAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-8324 | Theobroma cacao (Cacao) 1.1 | scaffold_6:9733858-9733929 | - | 6 | 2.83 | CUCAUCGAGCUCGUGACAACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8332 | Theobroma cacao (Cacao) 1.1 | scaffold_6:9932073-9932187 | + | 5 | 2.36 | UCUCGGUAGACACUUAUUGCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-8359 | Theobroma cacao (Cacao) 1.1 | scaffold_6:11505032-11505082 | - | 9 | 4.25 | UUAAAACAGACUGUAAUUGAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8385 | Theobroma cacao (Cacao) 1.1 | scaffold_6:13622684-13623552 | + | 835 | 394.39 | UGGACUAAACUACUUUAUCUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8466 | Theobroma cacao (Cacao) 1.1 | scaffold_6:17560058-17560217 | + | 5 | 2.36 | CAUGGCCUAGGGCAGUGACCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8469 | Theobroma cacao (Cacao) 1.1 | scaffold_6:17582949-17582976 | - | 7 | 3.31 | UCAAUGAGCUUCCUGAUGAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8496 | Theobroma cacao (Cacao) 1.1 | scaffold_6:18016142-18016381 | . | 7 | 3.31 | GGGAACCCGUCCGUCAGACGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8529 | Theobroma cacao (Cacao) 1.1 | scaffold_6:19051301-19051413 | - | 6 | 2.83 | UUCUCUGAACUGUAUUAGCUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-8564 | Theobroma cacao (Cacao) 1.1 | scaffold_6:19757872-19758293 | . | 24 | 11.34 | CGACUGCUCAACAUUCUUUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-8565 | Theobroma cacao (Cacao) 1.1 | scaffold_6:19758383-19758707 | . | 27 | 12.75 | UGGAUUUGCUCUAGUAAAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8626 | Theobroma cacao (Cacao) 1.1 | scaffold_6:20733605-20733631 | + | 5 | 2.36 | GCAAAAGGACUGUAACGAUUAUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8629 | Theobroma cacao (Cacao) 1.1 | scaffold_6:20804401-20804560 | . | 7 | 3.31 | CAGAUUUUGUGGCGACUCUUACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-8632 | Theobroma cacao (Cacao) 1.1 | scaffold_6:20815483-20815938 | . | 57 | 26.92 | CCUCCCCUAGAUGUAUUCUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8644 | Theobroma cacao (Cacao) 1.1 | scaffold_6:20992025-20992278 | . | 47 | 22.20 | UGGAUCUGACCGUAGAGUGCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-8713 | Theobroma cacao (Cacao) 1.1 | scaffold_6:22146873-22147083 | . | 5 | 2.36 | UCCAGGAACAGUUAUUGACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8722 | Theobroma cacao (Cacao) 1.1 | scaffold_6:22373422-22373447 | + | 117 | 55.26 | UCAGGUCAUCUUGCAGCUUCA | miR167 | siRNA21 | ShortStack |
| tcc-b1.1r1-8730 | Theobroma cacao (Cacao) 1.1 | scaffold_6:22488276-22488540 | . | 21 | 9.92 | CUACUGAACAAUUUGACCGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8738 | Theobroma cacao (Cacao) 1.1 | scaffold_6:22737631-22737739 | . | 5 | 2.36 | GAUUACAAAACUCCAUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-8749 | Theobroma cacao (Cacao) 1.1 | scaffold_6:22916266-22916428 | - | 5 | 2.36 | AGGCAGAUCCGGUCAUGUAAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-8818 | Theobroma cacao (Cacao) 1.1 | scaffold_6:24080261-24080340 | + | 15 | 7.09 | UUUCGGGUGCGAAGUUCGAGACGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-8892 | Theobroma cacao (Cacao) 1.1 | scaffold_6:25502944-25503076 | . | 5 | 2.36 | CGCAGGGUUUAACAGAUUCC | | siRNA21 | ShortStack |
| tcc-b1.1r1-8907 | Theobroma cacao (Cacao) 1.1 | scaffold_6:25661481-25661755 | - | 5 | 2.36 | CAAAUAAGGGCAAAUAGAGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8917 | Theobroma cacao (Cacao) 1.1 | scaffold_6:25760019-25760135 | . | 7 | 3.31 | CUUUCUCUCCUUUCUCCCUGCGGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-8942 | Theobroma cacao (Cacao) 1.1 | scaffold_6:26088221-26088419 | - | 6 | 2.83 | UAAUCGUGUCUGACUCGUUAACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-8950 | Theobroma cacao (Cacao) 1.1 | scaffold_6:26285048-26285637 | . | 36 | 17.00 | CUAUUCUGCCUUGUCUCUGGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-8952 | Theobroma cacao (Cacao) 1.1 | scaffold_6:26286269-26286583 | - | 18 | 8.50 | GCUGGUAGAGCACUGCCUCUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-8953 | Theobroma cacao (Cacao) 1.1 | scaffold_6:26287406-26287618 | - | 7 | 3.31 | UUGUCGGACACAUGUUGCCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-8954 | Theobroma cacao (Cacao) 1.1 | scaffold_6:26288101-26288379 | . | 8 | 3.78 | CAGGGAUCUCCACGUGCAUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-8955 | Theobroma cacao (Cacao) 1.1 | scaffold_6:26288725-26288992 | . | 9 | 4.25 | UCCUCAGCAAACUAACCAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8956 | Theobroma cacao (Cacao) 1.1 | scaffold_6:26289219-26289407 | - | 6 | 2.83 | UGAAUGGGUAGUGUCUCGUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-8957 | Theobroma cacao (Cacao) 1.1 | scaffold_6:26290418-26290563 | + | 6 | 2.83 | UCCAAGGAAGGAUGCAAGUAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-12397 | Theobroma cacao (Cacao) 1.1 | scaffold_66:58735-58861 | . | 5 | 2.36 | UGAGACUAUAAAAUUAUUUGAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-12400 | Theobroma cacao (Cacao) 1.1 | scaffold_68:22573-22599 | - | 7 | 3.31 | AAAUGGGCUGCCUUUUCAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9024 | Theobroma cacao (Cacao) 1.1 | scaffold_7:183833-183934 | + | 6 | 2.83 | UAUGGUAUUACGUGACUGGUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9039 | Theobroma cacao (Cacao) 1.1 | scaffold_7:382889-383166 | . | 7 | 3.31 | GAGGUAAUUGUAAAACAGCAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9041 | Theobroma cacao (Cacao) 1.1 | scaffold_7:383772-384018 | . | 7 | 3.31 | CAGUACGUGGACAUUUCAGAC | | siRNA21 | ShortStack |
| tcc-b1.1r1-9043 | Theobroma cacao (Cacao) 1.1 | scaffold_7:384651-384840 | . | 7 | 3.31 | CUCUUCUGGGAUAGGACCUGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-9044 | Theobroma cacao (Cacao) 1.1 | scaffold_7:385188-385475 | + | 7 | 3.31 | CUCCGAACUCUUUAGGAAUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9075 | Theobroma cacao (Cacao) 1.1 | scaffold_7:884808-884890 | - | 5 | 2.36 | UUCGUAGAACGGGCAUCACGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9078 | Theobroma cacao (Cacao) 1.1 | scaffold_7:946807-946898 | + | 5 | 2.36 | ACAUUGUGUGACUAGAUUUUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-9126 | Theobroma cacao (Cacao) 1.1 | scaffold_7:1917250-1917274 | - | 5 | 2.36 | GUCUGACGGACUGGUUCUCGGACC | | siRNA21 | ShortStack |
| tcc-b1.1r1-9133 | Theobroma cacao (Cacao) 1.1 | scaffold_7:2157253-2157408 | - | 6 | 2.83 | AACAUGGCUUGUAGUAACUAUAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9154 | Theobroma cacao (Cacao) 1.1 | scaffold_7:2699349-2699397 | + | 12 | 5.67 | ACGGAUAUGGGUACGUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9195 | Theobroma cacao (Cacao) 1.1 | scaffold_7:3204885-3205052 | . | 6 | 2.83 | UUGAUCCUGUACAACUUCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-9197 | Theobroma cacao (Cacao) 1.1 | scaffold_7:3369754-3369968 | . | 12 | 5.67 | CAUGGACUCAUUCUUUGGAAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9199 | Theobroma cacao (Cacao) 1.1 | scaffold_7:3387912-3388022 | . | 7 | 3.31 | UGUGUUGAUCUUAGACGAUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9202 | Theobroma cacao (Cacao) 1.1 | scaffold_7:3402012-3402481 | - | 29 | 13.70 | UUCUUAGAUCACGUGGGGCGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9203 | Theobroma cacao (Cacao) 1.1 | scaffold_7:3409668-3409899 | . | 6 | 2.83 | GUUUUAUGAACUUUGGGUAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9213 | Theobroma cacao (Cacao) 1.1 | scaffold_7:3502383-3502602 | . | 10 | 4.72 | CACGUGAUCUAAGAAUAAGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9242 | Theobroma cacao (Cacao) 1.1 | scaffold_7:4233317-4233548 | . | 5 | 2.36 | GAAUUCCUGAACCGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-9390 | Theobroma cacao (Cacao) 1.1 | scaffold_7:6379556-6379576 | + | 16 | 7.56 | UUUGGAUUGAAGGGGGCUCCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-9393 | Theobroma cacao (Cacao) 1.1 | scaffold_7:6425364-6425451 | . | 5 | 2.36 | UCGAGUAAAUUUUUCUAGGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9420 | Theobroma cacao (Cacao) 1.1 | scaffold_7:6843968-6843998 | - | 5 | 2.36 | ACAGACUUGUACUCUCCACCAUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9525 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9352225-9352327 | - | 5 | 2.36 | UUCGUGUUGAUUUUAGAUGAUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9527 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9377845-9377893 | + | 61 | 28.81 | UUAGAGGAUUUUGGAAGCAGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-9528 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9378201-9378371 | + | 191 | 90.21 | CCUGUGCUGCCGACUUGCUAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9534 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9413339-9413437 | . | 5 | 2.36 | ACGAAUCGAGACUUGUUCCUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9535 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9414556-9414691 | . | 8 | 3.78 | GCUUGAAAUUCGUGACUGUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9536 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9435405-9436841 | . | 1,115 | 526.64 | UCAUUGUAGACAAGUUGUGCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-9537 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9436969-9437388 | + | 24 | 11.34 | CCGAUUUGGAUGAAUUCUUCA | | siRNA21 | ShortStack |
| tcc-b1.1r1-9538 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9437535-9437672 | + | 5 | 2.36 | UGAGCACCAACUCUGCACAUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9539 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9452716-9454152 | . | 158 | 74.63 | UCGUAGAGCUGGAAUUAUGCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9541 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9454973-9455141 | + | 5 | 2.36 | CAGAUGAGGUAGAGGAGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9542 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9455670-9455950 | . | 10 | 4.72 | CGAGACUAGAUUUGAACAUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9546 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9535782-9535823 | + | 12 | 5.67 | UGAAGUCUGGUUUAUCGUGGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-9551 | Theobroma cacao (Cacao) 1.1 | scaffold_7:9702128-9704333 | . | 507 | 239.47 | UUGAACACGUUCGAAGCUGUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9680 | Theobroma cacao (Cacao) 1.1 | scaffold_7:13519226-13519400 | - | 6 | 2.83 | UUGCAAAUAAAGGUAGAAUGUUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-9682 | Theobroma cacao (Cacao) 1.1 | scaffold_7:13609778-13609938 | . | 13 | 6.14 | CGGUCUCGGUAGGAUGCCUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9700 | Theobroma cacao (Cacao) 1.1 | scaffold_7:15342767-15342797 | - | 5 | 2.36 | UUUAAAUAUGACGUGUAACUUAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9702 | Theobroma cacao (Cacao) 1.1 | scaffold_7:15505386-15505528 | + | 6 | 2.83 | UGUGACGGAAGAUGAGGUACGGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9714 | Theobroma cacao (Cacao) 1.1 | scaffold_7:16078452-16078611 | . | 5 | 2.36 | CCCUAGACGCGAAUGUGAAAACU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9720 | Theobroma cacao (Cacao) 1.1 | scaffold_7:16579683-16579851 | . | 5 | 2.36 | CCGCAAGACUUAGAUAUCAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9750 | Theobroma cacao (Cacao) 1.1 | scaffold_7:18838899-18838934 | - | 5 | 2.36 | CAAGGGAGUUUCGGGUCGUGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-9752 | Theobroma cacao (Cacao) 1.1 | scaffold_7:18909849-18909968 | + | 7 | 3.31 | CGAAAACUCUUGUCGAUGUAUGAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9776 | Theobroma cacao (Cacao) 1.1 | scaffold_7:19703672-19703692 | - | 34 | 16.06 | UCUCUCGGUUCACUUUCCUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9777 | Theobroma cacao (Cacao) 1.1 | scaffold_7:19704217-19704258 | - | 33 | 15.59 | AGGAACCUGAACCGAGAGUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-9779 | Theobroma cacao (Cacao) 1.1 | scaffold_7:19754274-19754294 | - | 24 | 11.34 | UCUCUCGGUUCACUUUCCUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9780 | Theobroma cacao (Cacao) 1.1 | scaffold_7:19754431-19754474 | - | 37 | 17.48 | UCUGCUAUCAGCUCUGCUUGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-9781 | Theobroma cacao (Cacao) 1.1 | scaffold_7:19754833-19754855 | - | 13 | 6.14 | AGGAACCUGAACCGAGAGUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-9783 | Theobroma cacao (Cacao) 1.1 | scaffold_7:19813445-19814186 | - | 1,120 | 529.00 | ACUUUCGGUUCACUUUCCUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9790 | Theobroma cacao (Cacao) 1.1 | scaffold_7:20174568-20174614 | - | 11 | 5.20 | CUGCGAUGUUUCUUUCUCGAAAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9799 | Theobroma cacao (Cacao) 1.1 | scaffold_7:20479748-20479802 | + | 31 | 14.64 | CCUCUCGGUUCACUUUCCUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9800 | Theobroma cacao (Cacao) 1.1 | scaffold_7:20525430-20525450 | + | 20 | 9.45 | AGGAACCUGAACCGAGAGUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-9801 | Theobroma cacao (Cacao) 1.1 | scaffold_7:20525635-20525806 | + | 12 | 5.67 | UGCGAGCAGAACUGACAACGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9802 | Theobroma cacao (Cacao) 1.1 | scaffold_7:20525994-20526016 | + | 42 | 19.84 | UCUCUCGGUUCACUUUCCUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-9816 | Theobroma cacao (Cacao) 1.1 | scaffold_7:21002889-21003030 | - | 6 | 2.83 | GACUAUUAUGGACUUUGUCUCAGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-9828 | Theobroma cacao (Cacao) 1.1 | scaffold_7:21445424-21445622 | . | 5 | 2.36 | UUAGUGCUCUUAAAUCAAAAC | | siRNA21 | ShortStack |
| tcc-b1.1r1-9918 | Theobroma cacao (Cacao) 1.1 | scaffold_7:24014294-24014433 | . | 5 | 2.36 | AAUCUGAAUCAAGGCUCCACCAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10093 | Theobroma cacao (Cacao) 1.1 | scaffold_8:3113245-3113393 | . | 6 | 2.83 | UCUAAGGUACUUGACAACUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10107 | Theobroma cacao (Cacao) 1.1 | scaffold_8:3783051-3783283 | . | 9 | 4.25 | UCUACUGGUAUUGGAUGAUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10108 | Theobroma cacao (Cacao) 1.1 | scaffold_8:3783364-3783661 | . | 21 | 9.92 | CAGCAGAUUGCAGACAAGUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10109 | Theobroma cacao (Cacao) 1.1 | scaffold_8:3783781-3784081 | . | 12 | 5.67 | UCGACGAUUUACUGAAGAUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10191 | Theobroma cacao (Cacao) 1.1 | scaffold_8:5227218-5227413 | . | 7 | 3.31 | AGCAAUCACAUUCUCAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10313 | Theobroma cacao (Cacao) 1.1 | scaffold_8:8091983-8092034 | - | 12 | 5.67 | GACAUGUGGACUGAUCAUAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10370 | Theobroma cacao (Cacao) 1.1 | scaffold_8:9606543-9606716 | + | 6 | 2.83 | AAGUUCACUGAAUAUGACUCGCUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-10375 | Theobroma cacao (Cacao) 1.1 | scaffold_8:9741957-9742014 | + | 5 | 2.36 | UGACGUGUCACAUGUUUCUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10391 | Theobroma cacao (Cacao) 1.1 | scaffold_8:10170825-10171070 | . | 9 | 4.25 | AUCUUCACGGACCAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10433 | Theobroma cacao (Cacao) 1.1 | scaffold_8:10933990-10934114 | . | 5 | 2.36 | UUGGCAAGACUCUAACAUGAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10445 | Theobroma cacao (Cacao) 1.1 | scaffold_8:11391681-11391757 | . | 9 | 4.25 | UCCGAUCUAACUCGCCUAUAC | | siRNA21 | ShortStack |
| tcc-b1.1r1-10458 | Theobroma cacao (Cacao) 1.1 | scaffold_8:12482597-12482631 | . | 7 | 3.31 | UAAAUUAUCAGUCUCGACAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10463 | Theobroma cacao (Cacao) 1.1 | scaffold_8:12822986-12823026 | - | 6 | 2.83 | GCGUAUUUUCUCGGUUGCAUCCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10481 | Theobroma cacao (Cacao) 1.1 | scaffold_8:13594276-13594464 | . | 7 | 3.31 | AAAGCAACGCGGAUA | miR518 | siRNA21 | ShortStack |
| tcc-b1.1r1-10499 | Theobroma cacao (Cacao) 1.1 | scaffold_8:15102224-15102300 | + | 7 | 3.31 | AGACUGUGAACUCUUACUUUUUA | | siRNA21 | ShortStack |
| tcc-b1.1r1-10504 | Theobroma cacao (Cacao) 1.1 | scaffold_8:15352318-15352413 | . | 7 | 3.31 | AUUGCUAUUCUGUGGGAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10587 | Theobroma cacao (Cacao) 1.1 | scaffold_8:17965011-17965137 | - | 5 | 2.36 | CUUUUCGAUUAUUGGGACCAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10604 | Theobroma cacao (Cacao) 1.1 | scaffold_8:18174034-18174113 | . | 5 | 2.36 | AAAAUUCUCAGGCUUAUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10645 | Theobroma cacao (Cacao) 1.1 | scaffold_8:19278718-19278757 | + | 6 | 2.83 | UUAUUGUUCAGAAUUUCUGUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-10750 | Theobroma cacao (Cacao) 1.1 | scaffold_9:667669-667814 | . | 6 | 2.83 | GAUCUAGUCGGAGAACACG | | siRNA21 | ShortStack |
| tcc-b1.1r1-10761 | Theobroma cacao (Cacao) 1.1 | scaffold_9:922271-922354 | + | 5 | 2.36 | UUGGAUGAACAUCUGGUUUGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-10853 | Theobroma cacao (Cacao) 1.1 | scaffold_9:2878556-2878703 | - | 5 | 2.36 | GAAUUGGUCGAAGUGGAAGAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10938 | Theobroma cacao (Cacao) 1.1 | scaffold_9:4133623-4133703 | . | 5 | 2.36 | GAUGAUUGGUCGGGACACGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-10945 | Theobroma cacao (Cacao) 1.1 | scaffold_9:4328738-4330368 | . | 427 | 201.68 | UAAAGAAAGUUAGCAAUGAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10949 | Theobroma cacao (Cacao) 1.1 | scaffold_9:4423757-4423903 | + | 5 | 2.36 | UGAUAAGUUAUGAUUAGCGUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-10955 | Theobroma cacao (Cacao) 1.1 | scaffold_9:4461106-4461730 | . | 24 | 11.34 | CGAAUCUGUUGACUCUGCUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-10956 | Theobroma cacao (Cacao) 1.1 | scaffold_9:4462051-4462391 | . | 25 | 11.81 | UGGGAAGAAACUGAAGCCAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11014 | Theobroma cacao (Cacao) 1.1 | scaffold_9:5821010-5821142 | . | 5 | 2.36 | CUUUGGUAGCUACCAUCUCCUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11053 | Theobroma cacao (Cacao) 1.1 | scaffold_9:6704545-6704684 | . | 5 | 2.36 | UCUUUCGGGUGGAUUUAUCAAGAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-11087 | Theobroma cacao (Cacao) 1.1 | scaffold_9:7139542-7139616 | + | 6 | 2.83 | ACGUACUUGUCAUGAAAGAGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-11092 | Theobroma cacao (Cacao) 1.1 | scaffold_9:7191006-7191188 | . | 5 | 2.36 | GGUCCACGUAUGCUCUGCUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11124 | Theobroma cacao (Cacao) 1.1 | scaffold_9:7602578-7602713 | + | 5 | 2.36 | AUGGCUGUCGAAUCACUUGUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-11274 | Theobroma cacao (Cacao) 1.1 | scaffold_9:10504792-10505117 | . | 19 | 8.97 | UUAUGAUCAAUCUGUUGAAUGAGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-11302 | Theobroma cacao (Cacao) 1.1 | scaffold_9:12333811-12333838 | + | 67 | 31.65 | UUCCAAUGUGGACAGACGAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11315 | Theobroma cacao (Cacao) 1.1 | scaffold_9:13306618-13306790 | . | 6 | 2.83 | CAUUACAUGGACUGGACCUAUUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11320 | Theobroma cacao (Cacao) 1.1 | scaffold_9:13491841-13492048 | . | 7 | 3.31 | GCUCUUUGGUCUGUAAAUCAAC | | siRNA21 | ShortStack |
| tcc-b1.1r1-11390 | Theobroma cacao (Cacao) 1.1 | scaffold_9:16872557-16872655 | . | 8 | 3.78 | UCAUCGUACGUUUUCUUUUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11415 | Theobroma cacao (Cacao) 1.1 | scaffold_9:17686416-17686591 | - | 5 | 2.36 | UUGCAUUGAGAUAUGGUACUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11421 | Theobroma cacao (Cacao) 1.1 | scaffold_9:17925480-17925517 | + | 5 | 2.36 | GUGAUUGUCAUGGGCUCGAGGGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-11442 | Theobroma cacao (Cacao) 1.1 | scaffold_9:18645249-18645296 | - | 5 | 2.36 | AAAUUCUCUUGACGGACUUAA | | siRNA21 | ShortStack |
| tcc-b1.1r1-11478 | Theobroma cacao (Cacao) 1.1 | scaffold_9:19968908-19968937 | - | 5 | 2.36 | UUGAUCUACUUAAGAGUCUGAGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11484 | Theobroma cacao (Cacao) 1.1 | scaffold_9:20065144-20065185 | - | 24 | 11.34 | UCCUUGUCUCGGUGGUAACCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11506 | Theobroma cacao (Cacao) 1.1 | scaffold_9:21209656-21209732 | . | 5 | 2.36 | UGCUCGAUGGGCUUUACCUGA | | siRNA21 | ShortStack |
| tcc-b1.1r1-11512 | Theobroma cacao (Cacao) 1.1 | scaffold_9:21889284-21889445 | + | 38 | 17.95 | CAAACGUGGUCUGAUUUUCUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-11555 | Theobroma cacao (Cacao) 1.1 | scaffold_9:23880312-23880499 | - | 6 | 2.83 | AACAAUGAGACUAUAAAACUAUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11560 | Theobroma cacao (Cacao) 1.1 | scaffold_9:23998764-23998800 | + | 6 | 2.83 | UCUGCCGACUGCAGUCCAGACUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-11743 | Theobroma cacao (Cacao) 1.1 | scaffold_9:32421861-32422035 | . | 7 | 3.31 | GAUGAUGAUAUGGAAUGUUGAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11764 | Theobroma cacao (Cacao) 1.1 | scaffold_9:32781405-32781578 | + | 5 | 2.36 | GAUGCUGGAGUCCUCUGUUGUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11765 | Theobroma cacao (Cacao) 1.1 | scaffold_9:32782044-32782374 | . | 10 | 4.72 | CUAUGCAUUAUCCCUUCAGGG | | siRNA21 | ShortStack |
| tcc-b1.1r1-11766 | Theobroma cacao (Cacao) 1.1 | scaffold_9:32782497-32782917 | . | 9 | 4.25 | UUGGUUAGGGGAUUGUUCAUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11767 | Theobroma cacao (Cacao) 1.1 | scaffold_9:32783170-32783383 | . | 11 | 5.20 | AGACUACCAGAAUCCAUCUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11788 | Theobroma cacao (Cacao) 1.1 | scaffold_9:33052909-33053165 | . | 6 | 2.83 | AUUUACGUUUCUAGAUUCUGAUUU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11794 | Theobroma cacao (Cacao) 1.1 | scaffold_9:33149110-33149233 | . | 6 | 2.83 | UUUUAUUUAGAGUUGGGUUUG | | siRNA21 | ShortStack |
| tcc-b1.1r1-11807 | Theobroma cacao (Cacao) 1.1 | scaffold_9:33422959-33423166 | . | 5 | 2.36 | AUAUAUAUCUGGAUUCUGUGCCCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11826 | Theobroma cacao (Cacao) 1.1 | scaffold_9:33878611-33878820 | . | 14 | 6.61 | CUCUGUUGAUCUAUUGUUUCU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11884 | Theobroma cacao (Cacao) 1.1 | scaffold_9:34796242-34796368 | + | 5 | 2.36 | CAUCACAUCGGUGCCACAGGACAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11887 | Theobroma cacao (Cacao) 1.1 | scaffold_9:34953854-34954053 | - | 5 | 2.36 | CUUCGGCUGAAUCCACGCAUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-11904 | Theobroma cacao (Cacao) 1.1 | scaffold_9:35147029-35147106 | + | 5 | 2.36 | UUCGACUGCAGAAUUUUAUACUGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-11907 | Theobroma cacao (Cacao) 1.1 | scaffold_9:35230956-35231016 | - | 5 | 2.36 | CUUUGUCGAUUAGAAUCAGGU | | siRNA21 | ShortStack |
| tcc-b1.1r1-12002 | Theobroma cacao (Cacao) 1.1 | scaffold_9:36772664-36772773 | + | 15 | 7.09 | UUCCAUGACUCUUGACUGUAG | | siRNA21 | ShortStack |
| tcc-b1.1r1-12014 | Theobroma cacao (Cacao) 1.1 | scaffold_9:37037059-37037344 | . | 7 | 3.31 | UUCGUCUGAAUAACACUACA | | siRNA21 | ShortStack |
| tcc-b1.1r1-12043 | Theobroma cacao (Cacao) 1.1 | scaffold_9:37530318-37530444 | - | 6 | 2.83 | UCGCGUUGGAGUACAAACUUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-12061 | Theobroma cacao (Cacao) 1.1 | scaffold_9:37904671-37904749 | + | 6 | 2.83 | UGUGCAAACUGAUGGAUGGAA | | siRNA21 | ShortStack |
| tcc-b1.1r1-12097 | Theobroma cacao (Cacao) 1.1 | scaffold_9:38692004-38692054 | . | 6 | 2.83 | GAUAUGUCGGCAUGUUAUGUC | | siRNA21 | ShortStack |
| tcc-b1.1r1-12192 | Theobroma cacao (Cacao) 1.1 | scaffold_9:40314057-40314122 | - | 6 | 2.83 | AAAAUCCGUCUCGAACUUCGC | | siRNA21 | ShortStack |
| tcc-b1.1r1-12203 | Theobroma cacao (Cacao) 1.1 | scaffold_9:40528255-40528358 | - | 8 | 3.78 | AGAAUCCUGAUGAUGCUGCAG | miR172 | siRNA21 | ShortStack |
| tcc-b1.1r1-12225 | Theobroma cacao (Cacao) 1.1 | scaffold_9:41057081-41057217 | + | 5 | 2.36 | AAUUCUAUCCAGUGAUUCUGUAAU | | siRNA21 | ShortStack |
| tcc-b1.1r1-12235 | Theobroma cacao (Cacao) 1.1 | scaffold_9:41124944-41124970 | - | 324 | 153.03 | AGAAUCUUGAUGAUGCUGCAU | miR172 | siRNA21 | ShortStack |
| tcc-b1.1r1-12241 | Theobroma cacao (Cacao) 1.1 | scaffold_9:41160916-41161058 | . | 10 | 4.72 | UUAAGUGUGGUCGUAGCAUU | | siRNA21 | ShortStack |
Data from Lunardon et al. (2020)