Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
tcc-b1.1r1-12496 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:1-1251 | - | 5,765 | 2,722.92 | AACAAGCCUUCAAUUAUCUAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12497 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:1358-4475 | . | 651 | 307.48 | GGGUUGCUAACUCAACGGUAGAGUACUCGGCUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12498 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:4564-9668 | . | 3,860 | 1,823.15 | GCGUCCAUUGUCUAAUGGAUAGGACAGAGGUCUUCUAAAC | | OtherRNA | ShortStack |
tcc-b1.1r1-12499 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:9775-12047 | - | 493 | 232.85 | UGUAGGCAUUAUUUUUUUUUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-12500 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:12171-14465 | - | 809 | 382.11 | AUUGUAUCAUUAACCAUUUCUUUAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12501 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:14553-17173 | . | 572 | 270.17 | UCGAAUGAAUUCAAGAACAUAUUC | | OtherRNA | ShortStack |
tcc-b1.1r1-12502 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:17261-17771 | . | 37 | 17.48 | AGACUAAUUAUUGUGGACGUUUCC | | OtherRNA | ShortStack |
tcc-b1.1r1-12503 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:17854-18672 | . | 52 | 24.56 | CUUUAAUAACUCAUAAUCAGACCU | | OtherRNA | ShortStack |
tcc-b1.1r1-12504 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:18749-22515 | . | 389 | 183.73 | AUUUAGUAAUUCCUGAACUCUUUC | | OtherRNA | ShortStack |
tcc-b1.1r1-12505 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:22598-22819 | . | 8 | 3.78 | CCGGAUGAGAGGAAACUCGC | | OtherRNA | ShortStack |
tcc-b1.1r1-12506 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:22903-26812 | . | 314 | 148.31 | AUUUUUCUAUUGGAGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-12507 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:26895-27135 | . | 11 | 5.20 | AUCUGUAUCUUCAAUUUUUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12508 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:27243-27941 | . | 40 | 18.89 | GGUAGAAAUUGAAUUAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12509 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:28012-31509 | - | 68,911 | 32,547.96 | GGGAUUGUAGUUCAAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12510 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:31584-32977 | . | 1,303 | 615.43 | GCCCUUUUAACUCAGUGGUAGAGUAACGCCAUG | | OtherRNA | ShortStack |
tcc-b1.1r1-12511 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:33078-37657 | . | 4,687 | 2,213.76 | GAAUGUGUCUCAAAAUCUGAAAAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-12512 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:38104-44253 | . | 22,039 | 10,409.43 | CGCGGGAUAGAGCAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12513 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:44445-44833 | . | 49 | 23.14 | UGAAACUCAUGUACUCUUUUGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12514 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:44913-45683 | . | 84 | 39.68 | UUAGGGGAUCGGCUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-12515 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:45759-47188 | - | 14,228 | 6,720.15 | UCUGCUUUUAUGUUAUUUCGUACUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12516 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:47292-49078 | . | 588 | 277.72 | ACUGCUAUGUAGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-12517 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:49283-49351 | . | 21 | 9.92 | AAUGAUAAUAAAAAAAAUAGAACUAAGAUAUA | | OtherRNA | ShortStack |
tcc-b1.1r1-12518 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:49410-49503 | . | 7 | 3.31 | UAAUUAGUUCUAGCUAUUAUACU | | OtherRNA | ShortStack |
tcc-b1.1r1-12519 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:49576-49989 | . | 20 | 9.45 | GGAAUACUCGAACGGUCGA | | OtherRNA | ShortStack |
tcc-b1.1r1-12520 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:50069-50301 | + | 1,172 | 553.56 | GGGGAUAUGGCGAAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-12521 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:50397-51695 | + | 1,056 | 498.77 | GUCGGGAUAGCUCAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12522 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:51787-52390 | . | 77 | 36.37 | AGAUCUAUGAACUAGCCCGUGUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12523 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:52467-54695 | . | 254 | 119.97 | AUGAACAAAUGCCCGAACCAAAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-12524 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:54833-58417 | . | 5,157 | 2,435.75 | AGGGCUAUAGCUCAGUUAGGUAGAGCACCUCGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12525 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:58637-60861 | + | 5,453 | 2,575.55 | AAAGGAUUGAGCCGAUC | | OtherRNA | ShortStack |
tcc-b1.1r1-12526 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:60958-69500 | . | 3,267 | 1,543.07 | AUAUAGGAAUUCUUGAACCCAAGA | | OtherRNA | ShortStack |
tcc-b1.1r1-12527 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:69578-72026 | - | 16,699 | 7,887.25 | AGGGAUGUAGCGCAGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-12528 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:72130-73773 | . | 245 | 115.72 | ACUAAUUUCUACUCUACCUUCCCCGAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12529 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:73905-74757 | - | 246 | 116.19 | AUCUGGUUAGGAUCGAUCUAAACCAGUCUAUUAUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12530 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:74844-75638 | - | 61 | 28.81 | AAUUACCAAACGUCUAGCAUUCCCUCACGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-12531 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:75750-75956 | . | 11 | 5.20 | ACCACGUCUUUUUGCUAUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12532 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:76033-76154 | . | 5 | 2.36 | AAAACGGAGCCUGGAUACUUCAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12533 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:76304-84376 | + | 7,616 | 3,597.18 | GGUAGUUCGACCGCGAAAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12534 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:84471-84920 | . | 55 | 25.98 | UGUUGAUAGUUAGAAUAGAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12535 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:85000-87262 | . | 214 | 101.08 | AUACUGUGGUCCGCC | | OtherRNA | ShortStack |
tcc-b1.1r1-12536 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:87371-88881 | . | 190 | 89.74 | AUUGAAAGAUCUUGAAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12537 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:88959-91719 | . | 681 | 321.65 | GUUAUUCUAUUCCACCUCUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12538 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:91811-93363 | . | 105 | 49.59 | GAAAUAGGAUGAAUUGAGACGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12539 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:93443-94260 | . | 86 | 40.62 | AUAGAUGUGGAUCUCAGACCUAUG | | siRNA21 | ShortStack |
tcc-b1.1r1-12540 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:94381-94822 | - | 24 | 11.34 | AUUGACUAUUUGUCCCUCUGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12541 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:94963-95353 | . | 39 | 18.42 | ACUCUGUCUGUAACUCACU | | OtherRNA | ShortStack |
tcc-b1.1r1-12542 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:95434-96245 | . | 51 | 24.09 | ACAGGAUGUAUUGAACUCAUAAUUCAU | | OtherRNA | ShortStack |
tcc-b1.1r1-12543 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:96321-96751 | . | 34 | 16.06 | AAGUGCUACAAGAUCUCGUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12544 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:96924-99198 | . | 532 | 251.27 | AACAAGAAUUCUUGAACAGCG | | OtherRNA | ShortStack |
tcc-b1.1r1-12545 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:99317-101774 | . | 395 | 186.57 | UAGUAGCCUCAUUAGACCGUACAUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-12546 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:101849-104054 | - | 10,186 | 4,811.04 | AGUUACUAAUUCAUGAUCUGGC | | siRNA22 | ShortStack |
tcc-b1.1r1-12547 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:104172-105505 | . | 254 | 119.97 | AGGGAUAUAACUCAGCGGUAGAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12548 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:105607-114219 | + | 54,508 | 25,745.15 | GGGCCUGUAGCUCAGAGGA | | OtherRNA | ShortStack |
tcc-b1.1r1-12549 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:114303-114811 | - | 38 | 17.95 | GGCUGAACUAACUCAUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12550 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:114892-115366 | . | 33 | 15.59 | UUUCGGAUCUAUUUACUUACU | | OtherRNA | ShortStack |
tcc-b1.1r1-12551 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:115479-117111 | . | 107 | 50.54 | AUAUUACAAAGUUAACUGGAAUUUUCUAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12552 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:117182-117234 | - | 6 | 2.83 | AAAUUUGAAGGAGACCCGUAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12553 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:117342-117412 | + | 6 | 2.83 | GUAGGACGACAAAAAAAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-12554 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:117539-118060 | . | 107 | 50.54 | AGUAGACAAAAUCAUCAGUUCAAAAUAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12555 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:118125-118578 | . | 34 | 16.06 | AGAGAAAUAAUGAUU | miR8415 | OtherRNA | ShortStack |
tcc-b1.1r1-12556 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:118710-118905 | . | 8 | 3.78 | AAAAAAGGAUAAAUAAAUAAAAGGAUA | | OtherRNA | ShortStack |
tcc-b1.1r1-12557 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:118985-119389 | + | 4,205 | 1,986.10 | GCCGCUAUGGUGAAAUCGGUAGACACGCUGCUCUUA | | OtherRNA | ShortStack |
tcc-b1.1r1-12558 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:119475-119739 | . | 25 | 11.81 | AAUGUAAUGACUAGAAGAGCUACU | | OtherRNA | ShortStack |
tcc-b1.1r1-12559 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:119816-120317 | . | 83 | 39.20 | UAUUACUUGGACCGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12560 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:120439-126225 | . | 1,385 | 654.16 | AUCUAUAAAUUUUUGAACAUCAU | | OtherRNA | ShortStack |
tcc-b1.1r1-12561 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:126309-128585 | . | 196 | 92.57 | GCCGGUCCUUUGGGAAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12562 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:128679-129423 | . | 21 | 9.92 | AGGGGAUAAAAUAUUUUCAGGAAC | | OtherRNA | ShortStack |
tcc-b1.1r1-12563 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:129515-129828 | . | 18 | 8.50 | CGUGUUGCUCUUGUAUUGCCU | | OtherRNA | ShortStack |
tcc-b1.1r1-12564 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:129975-130267 | . | 23 | 10.86 | AUCGAAUCUGGAACUUUGGUUCUUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-12565 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:130424-130500 | - | 5 | 2.36 | UAAAAAAGACUAUGGAUAUGAU | | OtherRNA | ShortStack |
tcc-b1.1r1-12566 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:130652-130893 | . | 17 | 8.03 | AAUAUGAUUUAUCUCAGAGUAGAU | | OtherRNA | ShortStack |
tcc-b1.1r1-12567 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:131307-131437 | . | 7 | 3.31 | CAGAUCUGACUAAGA | | OtherRNA | ShortStack |
tcc-b1.1r1-12568 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:131760-132197 | . | 28 | 13.23 | GAGUGGUCCGAGGAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12569 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:132400-132933 | . | 39 | 18.42 | ACGAAUUUCAUGCUCGGCUGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12570 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:133019-133447 | . | 18 | 8.50 | AUGAAUUGUAUACUGAUUGGAU | | OtherRNA | ShortStack |
tcc-b1.1r1-12571 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:133532-133649 | + | 8 | 3.78 | AUUCACUCGGAUCUCUUCUGUUU | | siRNA21 | ShortStack |
tcc-b1.1r1-12572 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:133772-144694 | - | 55,472 | 26,200.47 | GGGGAUAUAGCUCAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12573 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:144774-146916 | . | 290 | 136.97 | ACGGUUCUGUAGAGUGGC | | OtherRNA | ShortStack |
tcc-b1.1r1-12574 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:147023-149670 | + | 10,568 | 4,991.47 | AGUUACUAAUUCAUGAUCUGGCAU | | siRNA22 | ShortStack |
tcc-b1.1r1-12575 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:149753-152280 | . | 565 | 266.86 | AACAAGAAUUCUUGAACAGCG | | OtherRNA | ShortStack |
tcc-b1.1r1-12576 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:152364-154545 | . | 144 | 68.01 | GAUUUGACCUUUUCGAACUCUGUC | | OtherRNA | ShortStack |
tcc-b1.1r1-12577 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:154734-155677 | . | 74 | 34.95 | AUAGAUGUGGAUCUCAGACCUAUG | | OtherRNA | ShortStack |
tcc-b1.1r1-12578 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:155769-156984 | . | 98 | 46.29 | AUCUAUCAGAGAAAAAAGAACGAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-12579 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:157059-157262 | . | 19 | 8.97 | GAUAUCUAAUGAAACCGUCGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-12580 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:157367-157823 | . | 17 | 8.03 | AAAUCCUGGAUUUUCGAAUUGAGA | | OtherRNA | ShortStack |
tcc-b1.1r1-12581 | Theobroma cacao (Cacao) 1.1 | cacao1chloroplast:157930-160603 | - | 15,732 | 7,430.52 | GGCGGAUGUAGCCAAGUGGA | | OtherRNA | ShortStack |
tcc-b1.1r1-12582 | Theobroma cacao (Cacao) 1.1 | cacao1rdna_scaffold_175:121-3431 | + | 321,724 | 151,956.30 | UUGUCGCUCCGAUUCGU | | OtherRNA | ShortStack |
tcc-b1.1r1-12583 | Theobroma cacao (Cacao) 1.1 | cacao1rdna_scaffold_175:3954-4327 | . | 38 | 17.95 | UGGCUGGCACCACAGGGCCCGAGC | | OtherRNA | ShortStack |
tcc-b1.1r1-12584 | Theobroma cacao (Cacao) 1.1 | cacao1rdna_scaffold_175:4512-4811 | - | 48 | 22.67 | GAUGCUGCUGUUGCCUGGC | | OtherRNA | ShortStack |
tcc-b1.1r1-12585 | Theobroma cacao (Cacao) 1.1 | cacao1rdna_scaffold_175:5755-5863 | + | 5 | 2.36 | ACGAGAGCUUCUGUUGUGCAUGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12586 | Theobroma cacao (Cacao) 1.1 | cacao1rdna_scaffold_175:5941-6193 | . | 25 | 11.81 | GCAGGCCUGGAAAAGUUCGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-12587 | Theobroma cacao (Cacao) 1.1 | cacao1rdna_scaffold_175:6274-6650 | . | 69 | 32.59 | UGCCUUCGGGCCGUGGCAUCC | | OtherRNA | ShortStack |
tcc-b1.1r1-12588 | Theobroma cacao (Cacao) 1.1 | cacao1rdna_scaffold_175:6732-10515 | + | 374,090 | 176,689.74 | ACAACGACUCUCGGC | | OtherRNA | ShortStack |
tcc-b1.1r1-846 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5702-5800 | + | 5 | 2.36 | UAUAGAACUCCAGUUUGAAACUGC | | siRNA24 | ShortStack |
tcc-b1.1r1-847 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10814-10839 | + | 15 | 7.09 | UACGGUGAACUCUCCU | | OtherRNA | ShortStack |
tcc-b1.1r1-848 | Theobroma cacao (Cacao) 1.1 | scaffold_1:29469-29673 | . | 7 | 3.31 | GUAGCCAGAUUAGAGUUUGAACUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-849 | Theobroma cacao (Cacao) 1.1 | scaffold_1:29898-29966 | - | 10 | 4.72 | UUGUGUUCUUCCGUAGCUUUUAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-850 | Theobroma cacao (Cacao) 1.1 | scaffold_1:44947-45183 | . | 7 | 3.31 | AGCAGCCAACUUUCUCACGAUUUC | | OtherRNA | ShortStack |
tcc-b1.1r1-851 | Theobroma cacao (Cacao) 1.1 | scaffold_1:48715-48835 | . | 6 | 2.83 | UACGGAUGGGGAACAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-852 | Theobroma cacao (Cacao) 1.1 | scaffold_1:54164-54376 | . | 5 | 2.36 | CAAUGCCAUGUAGAUAAAUUUCAU | | siRNA24 | ShortStack |
tcc-b1.1r1-853 | Theobroma cacao (Cacao) 1.1 | scaffold_1:70845-71283 | . | 96 | 45.34 | AACCAGAUCUGACCGUUAAGUGCC | | siRNA24 | ShortStack |
tcc-b1.1r1-854 | Theobroma cacao (Cacao) 1.1 | scaffold_1:79417-79521 | . | 11 | 5.20 | AUCGAUUUCUCUGUUCGGCAUUCA | | siRNA24 | ShortStack |
tcc-b1.1r1-855 | Theobroma cacao (Cacao) 1.1 | scaffold_1:80313-80472 | . | 6 | 2.83 | AGGUUUUUGUACAUGACGUGUA | | siRNA24 | ShortStack |
tcc-b1.1r1-856 | Theobroma cacao (Cacao) 1.1 | scaffold_1:160788-161137 | . | 77 | 36.37 | ACUACGUCUGAAUCUGAUCAAUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-857 | Theobroma cacao (Cacao) 1.1 | scaffold_1:197798-197939 | - | 7 | 3.31 | UUAAAGGAAUUGACA | miR1520 | OtherRNA | ShortStack |
tcc-b1.1r1-858 | Theobroma cacao (Cacao) 1.1 | scaffold_1:310509-310823 | - | 8 | 3.78 | CCUCGGGGUUUUGCUGUG | | OtherRNA | ShortStack |
tcc-b1.1r1-859 | Theobroma cacao (Cacao) 1.1 | scaffold_1:318333-318359 | - | 5 | 2.36 | AACGAUCUUAACUAAUAGCUUCUG | | siRNA24 | ShortStack |
tcc-b1.1r1-860 | Theobroma cacao (Cacao) 1.1 | scaffold_1:333827-333841 | + | 5 | 2.36 | GGUGAAAUUGCGUAG | miR5308 | OtherRNA | ShortStack |
tcc-b1.1r1-861 | Theobroma cacao (Cacao) 1.1 | scaffold_1:373879-374009 | . | 21 | 9.92 | GAGACUCACGAUUUUAUGAAGAUA | | siRNA24 | ShortStack |
tcc-b1.1r1-862 | Theobroma cacao (Cacao) 1.1 | scaffold_1:405437-405534 | . | 5 | 2.36 | AACAAAAUGUCAGAUGGUGGAUU | | siRNA21 | ShortStack |
tcc-b1.1r1-863 | Theobroma cacao (Cacao) 1.1 | scaffold_1:450120-450658 | + | 67 | 31.65 | CCAUGACGUGUUACAUGUUUCUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-864 | Theobroma cacao (Cacao) 1.1 | scaffold_1:469492-469555 | + | 6 | 2.83 | UUCCAUUAGCCGUAAAUUCGCAGGGAUGUAGAAUAGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-865 | Theobroma cacao (Cacao) 1.1 | scaffold_1:470885-471075 | + | 7 | 3.31 | UUUACCGGCUGUAUGC | | OtherRNA | ShortStack |
tcc-b1.1r1-866 | Theobroma cacao (Cacao) 1.1 | scaffold_1:481536-481631 | - | 150 | 70.85 | UAUUGGCCUGGUUCACUCAGA | miR171 | OtherRNA | ShortStack |
tcc-b1.1r1-867 | Theobroma cacao (Cacao) 1.1 | scaffold_1:529607-529730 | - | 7 | 3.31 | CUGACUUAUGAACAAAAAUGUAG | | OtherRNA | ShortStack |
tcc-b1.1r1-868 | Theobroma cacao (Cacao) 1.1 | scaffold_1:534310-534416 | . | 10 | 4.72 | UCGAACCGAACUAACUGAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-869 | Theobroma cacao (Cacao) 1.1 | scaffold_1:547435-547452 | + | 5 | 2.36 | CUGGGACUGAGGACC | | OtherRNA | ShortStack |
tcc-b1.1r1-870 | Theobroma cacao (Cacao) 1.1 | scaffold_1:582626-582797 | + | 7 | 3.31 | CAGCGCAAGGCCCUGUUUUCUUCAGAC | | OtherRNA | ShortStack |
tcc-b1.1r1-871 | Theobroma cacao (Cacao) 1.1 | scaffold_1:586747-586814 | . | 7 | 3.31 | UUGGGCCAAACAGUUAGAAAC | | siRNA24 | ShortStack |
tcc-b1.1r1-872 | Theobroma cacao (Cacao) 1.1 | scaffold_1:586899-587057 | . | 11 | 5.20 | UGUAUAUGAUGAACAUUCCAAGGA | | siRNA24 | ShortStack |
tcc-b1.1r1-873 | Theobroma cacao (Cacao) 1.1 | scaffold_1:611528-611607 | + | 608 | 287.17 | UCCGUUGUCGUCCAGUGGC | | OtherRNA | ShortStack |
tcc-b1.1r1-874 | Theobroma cacao (Cacao) 1.1 | scaffold_1:615929-616007 | - | 6 | 2.83 | ACAUGAUCAAGGGAAAGACCCCUGAGGAGAUCAGAAAGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-875 | Theobroma cacao (Cacao) 1.1 | scaffold_1:616824-616989 | - | 7 | 3.31 | CGAGUAAGAUCCUGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-876 | Theobroma cacao (Cacao) 1.1 | scaffold_1:622736-622827 | - | 5 | 2.36 | GGAGGAGAGGAAGAAGGCUCGACGUUUGCGCAAAGCAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-877 | Theobroma cacao (Cacao) 1.1 | scaffold_1:624426-624445 | - | 9 | 4.25 | AUGACUUGAGAGGUA | | OtherRNA | ShortStack |
tcc-b1.1r1-878 | Theobroma cacao (Cacao) 1.1 | scaffold_1:633540-633848 | - | 11 | 5.20 | CAGCAUACUCUGUAACCCUCUCAGCAUC | | OtherRNA | ShortStack |
tcc-b1.1r1-879 | Theobroma cacao (Cacao) 1.1 | scaffold_1:634879-634955 | - | 5 | 2.36 | CCUGCAUAUCUUGAUCC | | OtherRNA | ShortStack |
tcc-b1.1r1-880 | Theobroma cacao (Cacao) 1.1 | scaffold_1:719389-719625 | . | 12 | 5.67 | AAGAUCAUCUGUCAAUUCAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-881 | Theobroma cacao (Cacao) 1.1 | scaffold_1:762738-762813 | - | 6 | 2.83 | AAUGAGAAUGGAGAACUUGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-882 | Theobroma cacao (Cacao) 1.1 | scaffold_1:770007-770230 | . | 6 | 2.83 | ACGUUAAGGGUAAACACU | | siRNA24 | ShortStack |
tcc-b1.1r1-883 | Theobroma cacao (Cacao) 1.1 | scaffold_1:770569-770732 | . | 5 | 2.36 | AUGACACGACAAACA | | siRNA24 | ShortStack |
tcc-b1.1r1-884 | Theobroma cacao (Cacao) 1.1 | scaffold_1:771319-771349 | - | 5 | 2.36 | AGAACGUGUGAGGUAACUGUGAAU | | siRNA21 | ShortStack |
tcc-b1.1r1-885 | Theobroma cacao (Cacao) 1.1 | scaffold_1:780656-780765 | . | 7 | 3.31 | AGUGACAUUUUGACUGAAGACGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-886 | Theobroma cacao (Cacao) 1.1 | scaffold_1:785824-785880 | . | 7 | 3.31 | UAGGAUCUCGUCUCAAAUCGAUU | | siRNA22 | ShortStack |
tcc-b1.1r1-887 | Theobroma cacao (Cacao) 1.1 | scaffold_1:814173-814318 | . | 13 | 6.14 | AGGGAUGUUAGUUACUUGCUGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-888 | Theobroma cacao (Cacao) 1.1 | scaffold_1:814957-815091 | + | 26 | 12.28 | UUAAAUUGUUAGAUAUGUGCUGUC | | OtherRNA | ShortStack |
tcc-b1.1r1-889 | Theobroma cacao (Cacao) 1.1 | scaffold_1:897750-897898 | . | 5 | 2.36 | CUUGACAUAAAAUUAUGAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-890 | Theobroma cacao (Cacao) 1.1 | scaffold_1:924239-924300 | - | 7 | 3.31 | AACACAACACGAGAAUAUACGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-891 | Theobroma cacao (Cacao) 1.1 | scaffold_1:960975-960989 | + | 87 | 41.09 | CCGGUGGGACCUCCA | miR9993 | OtherRNA | ShortStack |
tcc-b1.1r1-892 | Theobroma cacao (Cacao) 1.1 | scaffold_1:985054-985069 | - | 5 | 2.36 | AAGGAUUGACAGACC | | OtherRNA | ShortStack |
tcc-b1.1r1-893 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1004589-1004673 | + | 24 | 11.34 | UCCGUUGUAGUCUAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-894 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1005242-1005470 | . | 10 | 4.72 | UUAGUGCCUUGAUUUGAAGAAUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-895 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1006142-1006178 | - | 530 | 250.33 | UCCGUUGUAGUCUAGUUGGUCAGGAUA | | OtherRNA | ShortStack |
tcc-b1.1r1-896 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1013086-1013140 | - | 12 | 5.67 | AUAUAUAAUGUAGCAACGUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-897 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1019432-1019682 | + | 72 | 34.01 | AAGGUAGGCUCAAGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-898 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1043894-1044411 | - | 12 | 5.67 | GGGAAUUGCCUGAUGGGAUGAAACCGAGC | | OtherRNA | ShortStack |
tcc-b1.1r1-899 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1045743-1046055 | - | 9 | 4.25 | CGACUUCGGAGAAAACCA | | OtherRNA | ShortStack |
tcc-b1.1r1-900 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1071460-1071636 | - | 6 | 2.83 | UUAAGUGAUUGAAGAUGACAUGGA | | siRNA24 | ShortStack |
tcc-b1.1r1-901 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1071717-1071748 | + | 7 | 3.31 | UAAAUAGUAUCUGAAUGUCGU | | OtherRNA | ShortStack |
tcc-b1.1r1-902 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1075329-1075430 | + | 193 | 91.16 | GGGUGUUUGGUCUAGUGGUAUGAUUCUCGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-903 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1079461-1079597 | + | 27 | 12.75 | GCGGGGAUAGCUCAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-904 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1092545-1092841 | . | 9 | 4.25 | UUGGUGUAUAGGUUUCGAAUA | | OtherRNA | ShortStack |
tcc-b1.1r1-905 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1092930-1093322 | + | 37 | 17.48 | AUGUAACAACCUAAUCAUGACGUG | | siRNA24 | ShortStack |
tcc-b1.1r1-906 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1128212-1128467 | . | 19 | 8.97 | UCAUCUGUUGGUCCCUUCGAGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-907 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1148276-1148347 | . | 6 | 2.83 | CUUUUUGUUAUUGUGUGUUUUCCA | | siRNA24 | ShortStack |
tcc-b1.1r1-908 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1148522-1148816 | . | 17 | 8.03 | GGGACGUGUGUGGUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-909 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1235906-1236167 | . | 37 | 17.48 | UUCAGGACCGUGACAUCCAAAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-910 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1259426-1259526 | - | 776 | 366.52 | GGUGGCUGUAGUUUAGUGGUGAGAAUUCCACGUUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-911 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1278178-1280309 | . | 240 | 113.36 | UUGGAAAAGAGAUUGUAGAGA | | siRNA21 | ShortStack |
tcc-b1.1r1-912 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1331217-1331388 | + | 5 | 2.36 | UACGGCAGGCUUUUCAGAC | | OtherRNA | ShortStack |
tcc-b1.1r1-913 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1331606-1331681 | . | 14 | 6.61 | GCUGGAAUAGCUCGU | | OtherRNA | ShortStack |
tcc-b1.1r1-914 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1332295-1332451 | + | 5 | 2.36 | AAGGAAGGAUCCUUCAUGAUCGAUCGCUUGGAGGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-915 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1332531-1332728 | + | 5 | 2.36 | AAUCGCAUGUCCAAGGAGAAGACUGAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-916 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1337448-1337561 | - | 21 | 9.92 | AGAGAUCCUAGGAGGAUGAGACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-917 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1341081-1341460 | . | 25 | 11.81 | ACUUGAUUGAUAGAUUAAUUCACU | | siRNA24 | ShortStack |
tcc-b1.1r1-918 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1342440-1342651 | . | 12 | 5.67 | AAACCUAGAUCUUCACUGAUGUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-919 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1342772-1342953 | . | 8 | 3.78 | ACAAUAUACUGAUUGUCACAGAUC | | siRNA23 | ShortStack |
tcc-b1.1r1-920 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1413046-1413186 | + | 17 | 8.03 | GUUAUUACGUGGGAAUAGAAUGAG | | siRNA24 | ShortStack |
tcc-b1.1r1-921 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1413593-1413886 | . | 10 | 4.72 | GAUCUGGCCAGAUCUGGC | | siRNA24 | ShortStack |
tcc-b1.1r1-922 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1483635-1483693 | - | 168 | 79.35 | GCUGGAGUAGCUCAG | miR4900 | OtherRNA | ShortStack |
tcc-b1.1r1-923 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1490594-1490608 | - | 7 | 3.31 | UGUUGUCUGAUUUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-924 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1525862-1525947 | + | 188 | 88.80 | GUCGUUGUAGUAUAGUGGUGAGUAUUCCCGCCUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-925 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1599291-1599392 | - | 131 | 61.87 | GGACCCGUAGCUCAG | | OtherRNA | ShortStack |
tcc-b1.1r1-926 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1602825-1602955 | + | 6 | 2.83 | AAUAAGAAUAGAGGAUAAAUGACU | | siRNA24 | ShortStack |
tcc-b1.1r1-927 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1614806-1614997 | . | 8 | 3.78 | UUUUGGAUCAAAUAAGUUAUUAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-928 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1616715-1616781 | - | 6 | 2.83 | AGAUCUGUAAGCUCAAAACGG | | OtherRNA | ShortStack |
tcc-b1.1r1-929 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1617647-1619244 | - | 62 | 29.28 | CCGUGGUUUUUCCCCUUA | | OtherRNA | ShortStack |
tcc-b1.1r1-930 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1619414-1619546 | - | 7 | 3.31 | ACAUCGGAAUGACCUCCAAGCC | | OtherRNA | ShortStack |
tcc-b1.1r1-931 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1619670-1619876 | - | 10 | 4.72 | AGGAUGUGUAAGAUGUCAGGGCAAAAGUCC | | OtherRNA | ShortStack |
tcc-b1.1r1-932 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1627217-1627472 | - | 6 | 2.83 | AGCGAGAAUUCUGUUGUGGA | | OtherRNA | ShortStack |
tcc-b1.1r1-933 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1719143-1719163 | - | 18 | 8.50 | CUGUAGUUAAGCUGGUA | | OtherRNA | ShortStack |
tcc-b1.1r1-934 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1733441-1733500 | + | 1,397 | 659.83 | CCGCUGUAGCACAAA | | OtherRNA | ShortStack |
tcc-b1.1r1-935 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1782564-1782584 | - | 8 | 3.78 | UGAUUGGGCGUAAAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-936 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1828204-1828405 | . | 10 | 4.72 | AAGUGCAAUACGAAAGUCAGACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-937 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1831448-1831563 | - | 7 | 3.31 | AAAAUGACUGAAUAGAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-938 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1902847-1903175 | - | 23 | 10.86 | UACGUGACUAGUUAGUAAGACAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-939 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1926619-1926650 | . | 5 | 2.36 | AAAUCUUUAAUACAAACUACCAUC | | siRNA24 | ShortStack |
tcc-b1.1r1-940 | Theobroma cacao (Cacao) 1.1 | scaffold_1:1936041-1936068 | - | 5 | 2.36 | AAUCCGAUCGAUUCUGUAUUAAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-941 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2034396-2034412 | - | 8 | 3.78 | GACCGGCAGACUUGAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-942 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2049714-2050551 | - | 70 | 33.06 | CGACUCAUAGAGAGGCUCUUGUAUGA | | OtherRNA | ShortStack |
tcc-b1.1r1-943 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2051127-2051318 | - | 30 | 14.17 | UGACCUUAAGGACUUGGCUCAAAAGUGUGUUGAUG | | OtherRNA | ShortStack |
tcc-b1.1r1-944 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2052238-2052325 | - | 34 | 16.06 | CAGCGAUGAUGAAUAAUGGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-945 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2052429-2052552 | - | 200 | 94.46 | CAUAAUGAGGAUGAAUUAUGAAAGUCUGAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-946 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2052641-2052837 | - | 133 | 62.82 | UUCUCGGUGAUGAUC | | OtherRNA | ShortStack |
tcc-b1.1r1-947 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2077783-2077909 | . | 5 | 2.36 | AUAAAUCACAAACUCAUGUUCUCA | | siRNA24 | ShortStack |
tcc-b1.1r1-948 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2084568-2084714 | . | 7 | 3.31 | UUUCUCAUACCAAACACU | | OtherRNA | ShortStack |
tcc-b1.1r1-949 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2196272-2196294 | - | 6 | 2.83 | UUCCAUCUCUUGCACACUGU | miR2950 | siRNA20 | ShortStack |
tcc-b1.1r1-950 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2223298-2223474 | . | 9 | 4.25 | AAGUUAUAAUUGGUGUGAAUCUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-951 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2248874-2249063 | . | 10 | 4.72 | AUUCUUGUGUUCUUGUGGGUGUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-952 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2250286-2250637 | . | 19 | 8.97 | AACACGUUUAUGGAAUAUGAGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-953 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2251456-2251682 | . | 9 | 4.25 | AAAAGAUCUCGAAUGGAGUAUGUG | | siRNA24 | ShortStack |
tcc-b1.1r1-954 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2252216-2252385 | + | 20 | 9.45 | UGUUGCUGUGCUCGUGGACGUAGG | | siRNA24 | ShortStack |
tcc-b1.1r1-955 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2294801-2294829 | - | 13 | 6.14 | GCACCGAUCAAUGAACCAAAUGCU | | siRNA24 | ShortStack |
tcc-b1.1r1-956 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2375292-2375530 | . | 6 | 2.83 | GUGAUUAUAAAAAGCACUCGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-957 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2375610-2375654 | . | 5 | 2.36 | UAUAUAUUGAGUAGGUUCAGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-958 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2452139-2452195 | . | 6 | 2.83 | CUUCAGUUCAGUUUGGGCU | | siRNA24 | ShortStack |
tcc-b1.1r1-959 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2466545-2466692 | . | 7 | 3.31 | UUUAAGGGAUUAAACUCUAAGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-960 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2466978-2467157 | . | 11 | 5.20 | AGACAUGACGUGUAACAAUUUUGA | | siRNA24 | ShortStack |
tcc-b1.1r1-961 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2467324-2467439 | + | 9 | 4.25 | GUGAACACAGUAGACUGAUAUAGA | | siRNA24 | ShortStack |
tcc-b1.1r1-962 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2481227-2481257 | - | 81 | 38.26 | AUUGCUAAUCACUUGAUGUAG | | siRNA21 | ShortStack |
tcc-b1.1r1-963 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2508234-2508248 | - | 7 | 3.31 | CACCAGGAGUGGAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-964 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2521683-2521965 | + | 10 | 4.72 | GAUUAUCGAAUUGCCAGAUCUGGAG | | OtherRNA | ShortStack |
tcc-b1.1r1-965 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2525754-2525770 | + | 17 | 8.03 | UCCGGGUUGAAGACA | | OtherRNA | ShortStack |
tcc-b1.1r1-966 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2529975-2530094 | . | 6 | 2.83 | CUCGUGAACGUGAAUCUUACACC | | siRNA24 | ShortStack |
tcc-b1.1r1-967 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2561705-2561798 | . | 5 | 2.36 | CUGCUAUACCCACCA | | OtherRNA | ShortStack |
tcc-b1.1r1-968 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2589551-2589672 | - | 5 | 2.36 | GAAGGGAGCUUGACC | | OtherRNA | ShortStack |
tcc-b1.1r1-969 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2601093-2601206 | . | 6 | 2.83 | CUCCUCUCUAGAGCUCCC | | OtherRNA | ShortStack |
tcc-b1.1r1-970 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2601307-2601336 | + | 8 | 3.78 | ACUCCGUUGACGUAGAUAAGAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-971 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2611666-2611753 | . | 10 | 4.72 | ACGUAUCCUUAUAACCUGAGCA | | siRNA24 | ShortStack |
tcc-b1.1r1-972 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2616652-2617034 | . | 16 | 7.56 | GUUCACGGAGUAAAACUGUUCUU | | siRNA24 | ShortStack |
tcc-b1.1r1-973 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2617220-2617523 | . | 15 | 7.09 | AAAGGUUCCCAUGGUGUAGACGAU | | OtherRNA | ShortStack |
tcc-b1.1r1-974 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2618124-2618265 | . | 6 | 2.83 | AAGGAUUCUGCUCCAAGAUUGUGG | | siRNA24 | ShortStack |
tcc-b1.1r1-975 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2618548-2618618 | - | 6 | 2.83 | UUUCACUCUGUGGAUGUAGGCAAA | | siRNA24 | ShortStack |
tcc-b1.1r1-976 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2661689-2661737 | - | 7 | 3.31 | AAGACUAAACUCUGUAUGUGCAG | | siRNA24 | ShortStack |
tcc-b1.1r1-977 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2667981-2668154 | + | 9 | 4.25 | UAUGAUGAUGUGGCACUGACGUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-978 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2669628-2669801 | + | 8 | 3.78 | ACGUCAAGUCAUCAU | | OtherRNA | ShortStack |
tcc-b1.1r1-979 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2698290-2698330 | . | 8 | 3.78 | AAUGGUACUGAUCGUGGAACG | | siRNA24 | ShortStack |
tcc-b1.1r1-980 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2698415-2698552 | . | 10 | 4.72 | AUCUUUGAUACUGUCGUAACGUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-981 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2727538-2727613 | . | 8 | 3.78 | GGGGAAGUCGGAACU | | OtherRNA | ShortStack |
tcc-b1.1r1-982 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2731266-2731304 | + | 10 | 4.72 | UCAGGCGAUUGUGGGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-983 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2827066-2827313 | . | 15 | 7.09 | AGAGUCAGUGUAACAGAGAGACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-984 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2840141-2840245 | . | 9 | 4.25 | GAAAAUUUCGUAGAACUAGUAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-985 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2841451-2841756 | . | 25 | 11.81 | AUUUACGUGAUUCAGUCUCUUGCU | | siRNA24 | ShortStack |
tcc-b1.1r1-986 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2862129-2862293 | + | 5 | 2.36 | UGCGUUUGCAUUUUGAGAGCU | | siRNA21 | ShortStack |
tcc-b1.1r1-987 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2870061-2870147 | . | 12 | 5.67 | CGGACACUGUGAUUAAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-988 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2872161-2872224 | + | 5 | 2.36 | AAUGAGGCUCACGAUUUUAUGAAG | | siRNA22 | ShortStack |
tcc-b1.1r1-989 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2953206-2953314 | - | 20 | 9.45 | GGGAUUGUAGUUCAACC | | OtherRNA | ShortStack |
tcc-b1.1r1-990 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2958568-2958826 | + | 9 | 4.25 | CUCCUUGCAAUUUCCUUGUCUUUGGCCUAACACA | | OtherRNA | ShortStack |
tcc-b1.1r1-991 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2969369-2969595 | . | 9 | 4.25 | UUUUUUGGAUAUUUUAGUUUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-992 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2969925-2969965 | + | 8 | 3.78 | AUGUGUAUCUACAGAGUUUUGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-993 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2993539-2993675 | + | 6 | 2.83 | AGCUUCAGAUCAUCAGGACCGUUAGAUUCAUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-994 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2993752-2994177 | + | 12 | 5.67 | AACUAUCCACGUCGGAUUCAAUCAACGGAUGCUGAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-995 | Theobroma cacao (Cacao) 1.1 | scaffold_1:2994356-2994691 | + | 9 | 4.25 | UACAGAUGAGAAGACGGAUCAGAAGAAGGAGG | | OtherRNA | ShortStack |
tcc-b1.1r1-996 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3065982-3066135 | - | 14 | 6.61 | AAGUAUAGGAUUACAAGUUUAUGA | | siRNA24 | ShortStack |
tcc-b1.1r1-997 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3070810-3071021 | + | 5 | 2.36 | ACUGGAACUCGACGCUAAAGCGUA | | OtherRNA | ShortStack |
tcc-b1.1r1-998 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3098603-3098825 | . | 9 | 4.25 | AGGAAUACUCUAGAUAUGAAUAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-999 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3098955-3099165 | . | 19 | 8.97 | ACUGACUUUGAGCAUUACGUGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1000 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3099766-3099992 | . | 11 | 5.20 | UUUGCUCAAGGAGAAAGAACAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1001 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3123756-3124104 | + | 8 | 3.78 | UAUUCGGUUUUAGUUUGUAAAGAA | | siRNA24 | ShortStack |
tcc-b1.1r1-1002 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3146091-3146105 | + | 8 | 3.78 | CCCGGCCGUCGGGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1003 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3187985-3188007 | - | 5 | 2.36 | CUCAGAAUCCGGGCU | miR995 | OtherRNA | ShortStack |
tcc-b1.1r1-1004 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3190874-3191041 | . | 8 | 3.78 | AGAACACUGUAUAAUUUUGACAAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1005 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3257515-3257723 | - | 5 | 2.36 | GAAUUUCGGAGAUCUCUAAAAUUUUGAAUUUUGUGG | | OtherRNA | ShortStack |
tcc-b1.1r1-1006 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3258328-3258811 | - | 26 | 12.28 | CUCCAUCUAAAUCUGCUCCGGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1007 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3280345-3280661 | . | 10 | 4.72 | UUUCCAUUGUGUAGAGCUAGU | | siRNA21 | ShortStack |
tcc-b1.1r1-1008 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3280964-3281093 | . | 5 | 2.36 | AUGGAAGUCAGAGUUCAGCAACUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1009 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3283119-3283242 | . | 7 | 3.31 | GAUGUGACACUGACG | | OtherRNA | ShortStack |
tcc-b1.1r1-1010 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3284982-3285449 | - | 17 | 8.03 | UUACGAUAUCACGACAUGAAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1011 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3285695-3286023 | - | 8 | 3.78 | UUUCAAUCGUUACGCUACUCUUGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1012 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3308004-3308253 | - | 8 | 3.78 | AAUCCCGGACUUGUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1013 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3308364-3308745 | - | 12 | 5.67 | UUGCGGGCAAAAUUGUUC | | OtherRNA | ShortStack |
tcc-b1.1r1-1014 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3309029-3309190 | - | 7 | 3.31 | AAGGCUAUUGAUGACAAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1015 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3309275-3309568 | - | 6 | 2.83 | UCUUGGAUCCUGGGG | | OtherRNA | ShortStack |
tcc-b1.1r1-1016 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3315866-3315976 | + | 9 | 4.25 | AACUAAUUCAGACUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1017 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3320916-3320933 | - | 11 | 5.20 | CAGCCGGACGGUGGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1018 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3330703-3330903 | - | 5 | 2.36 | AGAUUCGGAUGUACA | | OtherRNA | ShortStack |
tcc-b1.1r1-1019 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3364265-3364464 | . | 17 | 8.03 | AAGACUAAAUACGAACACGACAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1020 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3365375-3365561 | + | 5 | 2.36 | AUCAGGAGGAAGCUGCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1021 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3382353-3382603 | + | 11 | 5.20 | UGGGUCAGGUCAUUAAUCUUGCAGUUGUGCUGUCACUUUCUCUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1022 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3383060-3383220 | + | 10 | 4.72 | UAUGAUUGCUCUUUCAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1023 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3383756-3383824 | + | 5 | 2.36 | ACAUGGACCCAAACACACCCACGAAAUUUGACAAUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1024 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3383905-3384083 | . | 13 | 6.14 | CCAUUCUUGACACCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1025 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3403960-3404030 | + | 8 | 3.78 | AUUUAUUUAAUGAUGACUGUGUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1026 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3467600-3467636 | - | 11 | 5.20 | UCUAUCAUGUAGUACUGAUGUGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1027 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3516615-3516633 | + | 33 | 15.59 | UCCGCUGUAGCACAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1028 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3627216-3627305 | - | 36 | 17.00 | GCUUUCGUAGCUCAGUUGGUUAGAGCACCCGUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1029 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3638447-3638548 | - | 5 | 2.36 | AUGGAUUAAGUCCCUGAAUUUCUCGAUUGUUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1030 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3641591-3641689 | - | 5 | 2.36 | AAAACCGAAGGUCAACUCCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1031 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3644094-3644362 | . | 17 | 8.03 | UCUUGGUGUUGGGUCUAGCCCAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1032 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3652434-3652532 | - | 63 | 29.76 | UCAGGCGAUUGUGGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1033 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3739167-3739342 | . | 9 | 4.25 | CUUCAACACUUGAUGUAACUCAGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1034 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3773490-3773619 | . | 9 | 4.25 | AUGACAGUUGGUAUCAGAGUGAUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1035 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3807552-3807586 | . | 5 | 2.36 | CGCCAUCUGUCGUGACGUGGGGGG | | siRNA21 | ShortStack |
tcc-b1.1r1-1036 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3906307-3906932 | - | 58 | 27.39 | UAUAUGUGCUGAAGAGAGCCAUGCAAAAAAUUGGGGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1037 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3907225-3907403 | - | 12 | 5.67 | UGUCCAGACCAAUAUAUAUGCUCAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1038 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3907539-3907635 | - | 29 | 13.70 | CAGUAUUUGUUCGGACGUGUUAGCAUGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1039 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3907751-3907974 | - | 16 | 7.56 | AUGACUAUGGCUUUGAGGAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1040 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3917012-3917155 | . | 8 | 3.78 | AACUCUGUUCCGUAUAAAAAGUUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1041 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3921522-3921536 | - | 19 | 8.97 | AGGGAUGUAGCGCCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1042 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3934990-3935403 | + | 10 | 4.72 | GACAGACUGAGAACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1043 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3936034-3936134 | + | 5 | 2.36 | GAUUUGGGAACUUUGCC | | OtherRNA | ShortStack |
tcc-b1.1r1-1044 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3937585-3937739 | - | 6 | 2.83 | UCUUUUCUUGGAUGUUAAUUUUAGCACUAUCAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1045 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3941806-3941901 | - | 5 | 2.36 | CUUCCAUUUGCCUCCAAAUGCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1046 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3942164-3942308 | - | 70 | 33.06 | UAGUGUUUGGAUGCAAUGGAAGU | | siRNA23 | ShortStack |
tcc-b1.1r1-1047 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3970116-3970587 | - | 16 | 7.56 | UGGAGGAAGGUGAGUUCUCUGAAGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1048 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3970674-3970911 | - | 7 | 3.31 | UAAAUGUGGAUGUAACUGAAUUUCAGACC | | OtherRNA | ShortStack |
tcc-b1.1r1-1049 | Theobroma cacao (Cacao) 1.1 | scaffold_1:3971523-3971672 | - | 12 | 5.67 | UCCUCAGUGAAACUGGUUCUGGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1050 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4047372-4047489 | . | 6 | 2.83 | UCGCGGAUGUUGACG | | OtherRNA | ShortStack |
tcc-b1.1r1-1051 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4059076-4059130 | - | 11 | 5.20 | CCUUUUGAUAUGUGGUGAGGUAGU | | siRNA21 | ShortStack |
tcc-b1.1r1-1052 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4160628-4160646 | - | 48 | 22.67 | GAAUGCAUUGGAUGGAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1053 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4213084-4213256 | - | 6 | 2.83 | AGGCCAAUUGUGUAGAAUGUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1054 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4246768-4246957 | . | 6 | 2.83 | AAACCAAGAGACUAAAUGACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1055 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4247691-4247879 | . | 10 | 4.72 | UUAAGUAUUUUGGAUAAAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1056 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4251820-4251953 | + | 6 | 2.83 | UGGAUGAUGAUAUAACAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1057 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4260056-4260175 | - | 6 | 2.83 | UCCUAUCAGAACUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1058 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4262516-4262663 | . | 6 | 2.83 | AUCCGACUGGGGGCCAAAGCCUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1059 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4317943-4318049 | + | 6 | 2.83 | UUGCGUAACUAGUUGAUUGACAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1060 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4318448-4318816 | . | 28 | 13.23 | GUUUUGGAUGGCGAGAUAGACAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1061 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4331653-4331790 | . | 6 | 2.83 | CUUCGAUGUCGGCUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1062 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4372398-4372603 | . | 20 | 9.45 | AAGAAUGUGUAUGUGAACAGGUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1063 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4377061-4377201 | . | 8 | 3.78 | UUUGUCGACAGUGCGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1064 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4378346-4378564 | . | 13 | 6.14 | AUUAAUGUAAGUAUUAACGGACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1065 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4378876-4379052 | . | 12 | 5.67 | AUUUACGUGGUUUGAUCUUUUGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1066 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4421605-4421622 | - | 10 | 4.72 | UUGAACGUGGACAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1067 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4423366-4423562 | . | 12 | 5.67 | CGAUCUUUUGUACCAACUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1068 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4424815-4424872 | + | 7 | 3.31 | AAAAUCAGAUCUUUGGAUAAAACC | | siRNA24 | ShortStack |
tcc-b1.1r1-1069 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4427276-4427461 | . | 8 | 3.78 | UUAUGAUCAUAGACAUAGAAGAGG | | OtherRNA | ShortStack |
tcc-b1.1r1-1070 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4446983-4447073 | + | 9 | 4.25 | UUGGUGUACGAUCUCUUUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1071 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4485940-4486019 | - | 1,301 | 614.49 | GCGCCUGUAGCUCAGUGGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1072 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4494484-4494572 | - | 5 | 2.36 | GACUUUGUGAAAUGACC | | OtherRNA | ShortStack |
tcc-b1.1r1-1073 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4509404-4509500 | - | 983 | 464.29 | GGGGGUGUAGCUCAUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1074 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4553279-4553408 | + | 45 | 21.25 | CUCUCUGAUGUGGAUGAGUCCCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1075 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4587832-4587982 | - | 21 | 9.92 | AUACCUUUCUCGGCCUUUUGGCUAAGAUCAAGUGUAGUAUCUGUUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1076 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4589311-4589568 | . | 5 | 2.36 | UUCGAUGUGAGACUUUGUA | | siRNA20 | ShortStack |
tcc-b1.1r1-1077 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4590064-4590323 | . | 7 | 3.31 | GGAAGUAAAGGAGGAUGUCAUGGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1078 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4590434-4590801 | . | 13 | 6.14 | AUGGACGUGAAUCUCACAUAAUUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1079 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4660402-4660486 | + | 487 | 230.02 | UAAGUACAUGGGAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1080 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4662595-4662653 | + | 5 | 2.36 | CCCGCAUGGGACUGUACGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1081 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4662978-4663311 | + | 9 | 4.25 | UAUAUCAACGAGGACGAUGAUGAAAAAGAAUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1082 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4684309-4684391 | - | 51 | 24.09 | UUGCCGUGAUGACUACUAGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1083 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4685367-4685464 | - | 13 | 6.14 | UUGAUCCUGAGCGGUUACCUGAGCAAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1084 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4691574-4691691 | . | 9 | 4.25 | AUUCGAACUCUGCUCUUUAAGUAG | | siRNA24 | ShortStack |
tcc-b1.1r1-1085 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4710420-4710560 | . | 11 | 5.20 | ACUCUUCCGUCUACUUUGAGUCGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1086 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4711113-4711263 | - | 5 | 2.36 | CUUAAACGUGAUAAAGAAAACUGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1087 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4711893-4711955 | + | 5 | 2.36 | UACAAGAGCUCAAAGUAGGCC | | siRNA21 | ShortStack |
tcc-b1.1r1-1088 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4712316-4712488 | - | 10 | 4.72 | UGUGUAGCGAUCUCUAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1089 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4712635-4712670 | + | 5 | 2.36 | AUAUGUUGGAUUUAGACUGUAGCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1090 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4713006-4713165 | . | 8 | 3.78 | UCUGUUAUCUAAAUGUAGAAAUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1091 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4713456-4713855 | . | 23 | 10.86 | AAUAUGAAAGCUCAUAUCGGACUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1092 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4714334-4714432 | . | 6 | 2.83 | GGGUAUGUGUAGCCAAAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1093 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4749939-4750166 | + | 6 | 2.83 | ACUAACGUAACACUGAUAUACUGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1094 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4779485-4779661 | . | 13 | 6.14 | UUGCGUGAUUAGGUUGUAAGCAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1095 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4780094-4780157 | . | 6 | 2.83 | UAGAUCCGCGCUGCAAACUGAUU | | siRNA23 | ShortStack |
tcc-b1.1r1-1096 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4782297-4782374 | + | 17 | 8.03 | GGUCCCAUGGUCUAGUGGUCAGGACAUUGGACUCUGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1097 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4788765-4789045 | . | 17 | 8.03 | AAAUUAUGUUCGACGAUGUUUCCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1098 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4792888-4793100 | + | 13 | 6.14 | UAUUACGUGACUGAUUGAUAUGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1099 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4797649-4797689 | + | 5 | 2.36 | AUCCGUAUAUGUAUUCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1100 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4852209-4852295 | . | 5 | 2.36 | AUUCGGAACUCAAGGUCCAGUUUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1101 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4866395-4866494 | . | 26 | 12.28 | AAAUACUGUCUAUCUCGUCAUUCA | | siRNA24 | ShortStack |
tcc-b1.1r1-1102 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4866773-4867105 | . | 23 | 10.86 | CGAUUUUAGAUAUUACGUGACUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1103 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4869971-4870169 | . | 6 | 2.83 | AUAUGACUGUUAGUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1104 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4897805-4898001 | . | 6 | 2.83 | AGGGGCGACCCACGGCUGAGAGAG | | OtherRNA | ShortStack |
tcc-b1.1r1-1105 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4936768-4936784 | + | 6 | 2.83 | UAAAUCAUGUGGGCUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1106 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4966738-4966785 | + | 8 | 3.78 | UCGCUACCGUCCUGGAACUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1107 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4967070-4967622 | + | 24 | 11.34 | AGACUGAUCUGCGUUUCCAGAGCCAUGCUGUUCUGGCUCUCCAGGAA | | OtherRNA | ShortStack |
tcc-b1.1r1-1108 | Theobroma cacao (Cacao) 1.1 | scaffold_1:4971870-4971992 | - | 20 | 9.45 | CGGCGUGUGUAGAAGAAAUAAAAGAACAAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1109 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5012147-5012297 | + | 16 | 7.56 | AACGUGUGGAUCCGAGAACUCAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1110 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5037235-5037284 | + | 5 | 2.36 | ACGUGUGGAUCCGAGAACUCAACC | | nearMIRNA | ShortStack |
tcc-b1.1r1-1111 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5041962-5042036 | + | 12 | 5.67 | GAGGAUGUGGGACGUGUCAUCCAUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1112 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5042907-5043042 | . | 5 | 2.36 | UUGUUGAGGGUGCUGCCAUUUGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1113 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5046293-5046607 | . | 9 | 4.25 | AAGGGAAAAUGAGAAGAAAACA | | OtherRNA | ShortStack |
tcc-b1.1r1-1114 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5047029-5047233 | . | 17 | 8.03 | AUUUAUUCUGCGAACCAAACGUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1115 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5052777-5052825 | . | 10 | 4.72 | AAAAGAUCGACGCCUAAACGACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1116 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5065651-5065666 | - | 18 | 8.50 | CGAACCCGUCGGCUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1117 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5074203-5074307 | . | 5 | 2.36 | CAGUCCGAUGUAAACUUUCACAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1118 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5078702-5078776 | . | 13 | 6.14 | GUCCACGUUGUACUGUUUGGGAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1119 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5112758-5112934 | . | 11 | 5.20 | CAUUAAAUUUGUCGUGUUCGUAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1120 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5165962-5166201 | . | 7 | 3.31 | AUUGGAUGCCGUUAAGGAAAAUGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1121 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5174125-5174236 | - | 7 | 3.31 | AAUAGACACUGUACUAAGCUCUUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1122 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5175883-5176018 | . | 5 | 2.36 | CGACUGUCGCGCCAUCAGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1123 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5176829-5176990 | . | 8 | 3.78 | AUCUCGAGCUUAUGUUCCCUAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1124 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5178046-5178131 | . | 5 | 2.36 | UUUAGAUCUAGGUUCGGGAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1125 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5214269-5214322 | + | 7 | 3.31 | UGGUUUGACGUAUGCACAUGAUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1126 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5214712-5214783 | - | 11 | 5.20 | AAGUGCGGAGUUCGAAACGAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1127 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5239556-5239594 | - | 7 | 3.31 | AAGUUUGGAUUGGUGGAAGAAAUGGUUAUCUUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1128 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5261422-5261491 | - | 8 | 3.78 | UGGAUUGUAGUUCAAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1129 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5287983-5288199 | . | 5 | 2.36 | ACGCUCUCCCGUCGUACUGGUGGG | | OtherRNA | ShortStack |
tcc-b1.1r1-1130 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5332063-5332187 | + | 7 | 3.31 | UGGGUUCGAUCCCCAGUGGAGUCGGUAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1131 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5334393-5334574 | - | 5 | 2.36 | UCCUGAUUUCCAUGUCAAGAAGGGUCGUCUUGCUGGCUC | | OtherRNA | ShortStack |
tcc-b1.1r1-1132 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5338978-5339136 | + | 5 | 2.36 | UCGGGCAUGCUAUCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1133 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5391458-5391636 | - | 9 | 4.25 | CAACGGAGAGCGGGCUGGGUUCCAAGAUGUUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1134 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5434169-5434275 | . | 9 | 4.25 | AAGGUUGUACUCGAGCAUUUGGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1135 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5455072-5455313 | - | 10 | 4.72 | AUACAUGGCGUAUAACAACUUAGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1136 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5458745-5458907 | . | 8 | 3.78 | AAUCCGUUGGAAAAGAUAAAGAUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1137 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5461127-5461318 | . | 7 | 3.31 | CAAACCCCAAACUCCUUAAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1138 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5464863-5464909 | . | 5 | 2.36 | GAGGAUCAUGUACCAACCGAUGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1139 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5513796-5513845 | - | 5 | 2.36 | UACUAAACUGCAUGAAUUUAUGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1140 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5521931-5522190 | - | 27 | 12.75 | AUAAUUAGAUCGUUACACGUUAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1141 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5522486-5522798 | . | 14 | 6.61 | GAAAUCGAGAGCUUAGCAGACAAA | | OtherRNA | ShortStack |
tcc-b1.1r1-1142 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5541479-5541709 | . | 6 | 2.83 | UUAUAUAUUAUGCGGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1143 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5559864-5559880 | - | 5 | 2.36 | UGUGGCGAAGAAGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1144 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5561548-5561564 | - | 7 | 3.31 | UUGAAAUUGUCGGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1145 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5588999-5589141 | . | 29 | 13.70 | ACAGCGAAUCUGAACUUAUGCAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1146 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5589240-5589345 | . | 14 | 6.61 | CACGUCUUGCGAGUUGCUCUUGUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1147 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5590697-5590846 | - | 5 | 2.36 | GGAUAAGGAUGAAGACA | | OtherRNA | ShortStack |
tcc-b1.1r1-1148 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5591033-5591269 | . | 24 | 11.34 | AGUUGAUUUAGGAUUUAUUUUCUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1149 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5594339-5594393 | + | 5 | 2.36 | AUUAGGUACCUGUGAAGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1150 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5598448-5598541 | - | 285 | 134.61 | GGGGAUGUAGCUCAGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1151 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5602369-5602534 | - | 11 | 5.20 | UACUCUGGACUGCGAACACUGAGAGGUACAGCAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1152 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5602721-5602899 | - | 10 | 4.72 | UGAUUUGCAGAAGCAGCUGAGGUCCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1153 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5603449-5603581 | - | 11 | 5.20 | CCACCGAGCUUGUUCAUGAGAAA | | OtherRNA | ShortStack |
tcc-b1.1r1-1154 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5609998-5610201 | - | 7 | 3.31 | UAUUGAUUUUGGAAAUUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1155 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5616852-5617120 | . | 19 | 8.97 | AAAGAACAAAAAGCAACAACA | | siRNA24 | ShortStack |
tcc-b1.1r1-1156 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5669401-5669502 | - | 5 | 2.36 | GUGUCGUGUCGUGUUAUACGU | | siRNA23 | ShortStack |
tcc-b1.1r1-1157 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5669841-5670005 | + | 15 | 7.09 | UUAAACGUGUUUGUCGUACCUGAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1158 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5682898-5683079 | . | 9 | 4.25 | AUAGCUGCCGAUCGAUAAAAUGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1159 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5704427-5704511 | - | 5 | 2.36 | UUGAUCGGGUUGUAAUGCUUGGAGCAGUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1160 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5708541-5708678 | - | 5 | 2.36 | UAGAAUCAGGGGCUUUAGAAGCAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1161 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5785618-5785742 | + | 5 | 2.36 | AUAUAUUUCGUGACUGGAGGAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1162 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5787236-5787388 | - | 15 | 7.09 | UUGGUAUUAUGAAUGGAAUAGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1163 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5790480-5790579 | . | 6 | 2.83 | UUCUGUACUCCCGAUUUCUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1164 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5792717-5792927 | . | 9 | 4.25 | AUUUAUAGACAGUGAUUUGGGUGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1165 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5808268-5808344 | + | 5 | 2.36 | ACAUGUGUCUGGAUUGCUUUAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1166 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5810641-5810860 | . | 15 | 7.09 | AUCGAACCGAACUAACCGAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1167 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5870509-5870640 | . | 6 | 2.83 | AUAAUCUCUGUUAACGUUGUUUGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1168 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5877432-5877448 | + | 7 | 3.31 | AGACCCUGUUGAGCC | miR263 | OtherRNA | ShortStack |
tcc-b1.1r1-1169 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5893472-5893577 | - | 22 | 10.39 | ACCAGCGGAUCCGUGGCGCAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1170 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5913467-5913530 | + | 6 | 2.83 | UAUUGUUGAAGAAGAGCUUGGAGCCCCUGUAGAUGAUACCUUUGAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1171 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5914200-5914271 | . | 5 | 2.36 | CGAUCCUUUAGACCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1172 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5921005-5921212 | + | 6 | 2.83 | AGUAAAUUGGUCAUGAGAAGUCUAACAGCUGUGCACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1173 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5961958-5962174 | . | 5 | 2.36 | UUGAAUGUGAAUUCCGCUCUGCAA | | OtherRNA | ShortStack |
tcc-b1.1r1-1174 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5965846-5966147 | . | 15 | 7.09 | AGUGAUCUGUUACAAAAUAAAC | | siRNA23 | ShortStack |
tcc-b1.1r1-1175 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5966795-5966953 | - | 5 | 2.36 | GAAUAAAACUUGUGAUGAAUGAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1176 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5967674-5968185 | . | 19 | 8.97 | AACAUGACGUGUAACAACCUAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1177 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5986588-5986768 | . | 5 | 2.36 | AUCAUUAUUUUGCUUGC | | siRNA21 | ShortStack |
tcc-b1.1r1-1178 | Theobroma cacao (Cacao) 1.1 | scaffold_1:5987271-5987446 | . | 18 | 8.50 | CAGUGGUCUGUUACAAAACAAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1179 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6025308-6026041 | . | 78 | 36.84 | AUAACGACUCAAGUUCAACCACUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1180 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6050420-6050563 | . | 17 | 8.03 | GACCCGAUUAUACUGGAUUAGAGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1181 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6057061-6057181 | . | 7 | 3.31 | GAAAAUUUUCAGAUCUUAACGUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1182 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6058037-6058161 | + | 7 | 3.31 | GAUAAAAAAGAAUGGACUGUUAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1183 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6082900-6083025 | . | 5 | 2.36 | AUUAUGACUAUAACGUACGU | | siRNA20 | ShortStack |
tcc-b1.1r1-1184 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6083841-6083938 | + | 6 | 2.83 | UAUCACGUUAGCACCAUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1185 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6106295-6106347 | + | 8 | 3.78 | GUCCACUGGGCUGUUUGACUUGGU | | siRNA23 | ShortStack |
tcc-b1.1r1-1186 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6107280-6107355 | - | 5 | 2.36 | AAAUGUGCUACUCGUGUCUGACAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1187 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6107716-6107846 | . | 7 | 3.31 | UCGUGUCGUGUUGUGUUACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1188 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6108027-6108416 | . | 24 | 11.34 | AGAUAGUGGAUCUUGGGGUUCUCA | | siRNA24 | ShortStack |
tcc-b1.1r1-1189 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6109044-6109141 | - | 9 | 4.25 | GCAUUACGUGACUGACUUUAGACA | | siRNA24 | ShortStack |
tcc-b1.1r1-1190 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6115398-6115589 | - | 23 | 10.86 | UAAACGCGUGCAUGUAGAUAUCAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1191 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6134435-6134645 | . | 24 | 11.34 | AGGACUUCGUCGAUUAGAAUCAGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1192 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6134969-6135140 | . | 10 | 4.72 | CGAAAGAACUCGUCUCUACAAGCC | | siRNA24 | ShortStack |
tcc-b1.1r1-1193 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6138345-6138559 | . | 8 | 3.78 | GAAAGGAAGAAAGAGCAAACGAGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1194 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6151433-6151682 | . | 15 | 7.09 | AUUGUCGAUCUAAGAUUAAAAAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1195 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6151903-6152031 | + | 9 | 4.25 | UGACGUGUAACAUCUGGUGAUGAA | | siRNA24 | ShortStack |
tcc-b1.1r1-1196 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6221493-6221513 | - | 14 | 6.61 | UUGGGAAUGCAGCUCUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1197 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6227806-6228036 | . | 8 | 3.78 | CGAUCUCGAGGAUGAUGACA | | siRNA24 | ShortStack |
tcc-b1.1r1-1198 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6239164-6239263 | . | 9 | 4.25 | GGUGGCGACUCCUUUUU | | siRNA23 | ShortStack |
tcc-b1.1r1-1199 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6239618-6239701 | . | 5 | 2.36 | AUUAUUCGUCGAAUUUGUGAAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1200 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6289521-6289712 | . | 10 | 4.72 | UAUAUGCAAAAAUAUCGUCGACGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1201 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6322353-6322604 | . | 9 | 4.25 | AUGGGUCGGUCGCCGGAAAAGCAAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1202 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6378623-6378683 | - | 16 | 7.56 | CUUCCUUGGAUGUCUGAAACUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1203 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6378875-6378999 | - | 20 | 9.45 | UUGGAUGUCUGAGACCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1204 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6408172-6408343 | . | 25 | 11.81 | ACAAUAAGAUUUGUCGUAACGUGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1205 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6410124-6410300 | - | 6 | 2.83 | AAAGAGUAUAAGAACUGGAUAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1206 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6412606-6412629 | - | 5 | 2.36 | AUCCGAUCGUUAACAACGUUUAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1207 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6439962-6439996 | - | 6 | 2.83 | UUACGUGGGAAUAGAAUGACGUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1208 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6440575-6440867 | . | 6 | 2.83 | AAAGGAUGGCACAACACGGUGGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1209 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6443297-6443444 | - | 7 | 3.31 | GUUGUAUUUUUUGGGUCUGUAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1210 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6444885-6445055 | - | 13 | 6.14 | UCUGUGACUGAGGAUAUCC | | OtherRNA | ShortStack |
tcc-b1.1r1-1211 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6445951-6446118 | - | 38 | 17.95 | ACCGUUCAUUGUUUGUACUGAAG | | OtherRNA | ShortStack |
tcc-b1.1r1-1212 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6447088-6447314 | - | 5 | 2.36 | CUCCAUUGAUCACUGCAAACACUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1213 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6447589-6447733 | - | 5 | 2.36 | CUUAUGGCUUGUGGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1214 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6450263-6450339 | - | 5 | 2.36 | CAAGGAAUUUGGUGGUACUGAGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1215 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6467371-6467677 | . | 8 | 3.78 | UGGAUCUGAUAAAUAUACUGUAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1216 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6474493-6474705 | . | 8 | 3.78 | AAGCCCACUGAAAAGAACCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1217 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6531992-6532244 | - | 7 | 3.31 | AUACCUUAAUGUCAUAUCUGCUCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1218 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6541564-6541580 | - | 88 | 41.56 | UCCGUUGUAGUCACGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1219 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6552796-6552876 | - | 5 | 2.36 | GGGAUGGUAGCUACCAAAGUGAGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1220 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6553469-6553614 | . | 7 | 3.31 | CUUCGCUUCUAGACUCCUAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1221 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6587582-6587887 | . | 12 | 5.67 | AAUAAGGUAGGAGGUUGAAACACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1222 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6590613-6590755 | - | 7 | 3.31 | ACGACUAUUUGACUUAAUGGGUAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1223 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6611933-6611960 | + | 6 | 2.83 | GUUGACGUGCACUCUCAAACAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1224 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6614655-6614914 | . | 10 | 4.72 | AGGACUUCGUCAAUUAGAAUCAGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1225 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6615240-6615369 | - | 16 | 7.56 | AAACGCGUGCAUGUAGACAUCAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1226 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6625283-6625361 | + | 11 | 5.20 | CUCUAAGGGUCGGGUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1227 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6631688-6631949 | + | 11 | 5.20 | AUUGCGUAACUGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1228 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6670438-6670567 | - | 73 | 34.48 | ACGGAGCCGUGUGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1229 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6672512-6672776 | - | 112 | 52.90 | UGAGAAUUUCUGGAAGGGCUCCCUUUGGGGUAAAGCCCUAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1230 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6677663-6677799 | - | 15 | 7.09 | CAGAGAGUACAGAGCGAACUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1231 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6678659-6678820 | . | 182 | 85.96 | AAAUUAUGACGUAGGCUCUCC | | OtherRNA | ShortStack |
tcc-b1.1r1-1232 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6703163-6703599 | - | 16 | 7.56 | UCAUCUGUUGUGACUUGUGAUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1233 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6703846-6704108 | - | 15 | 7.09 | UUGUGCUCAGUGGUGGUUCAACUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1234 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6704187-6704332 | - | 9 | 4.25 | AUUGUACUGGAUUCUGGUGAUGGUGUAUCUCACACUGUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1235 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6704427-6704805 | - | 12 | 5.67 | UGUGCUGGCGAUGAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1236 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6711311-6711577 | + | 38 | 17.95 | UAACAGCUCUGAAGGUUC | | OtherRNA | ShortStack |
tcc-b1.1r1-1237 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6738801-6738886 | . | 5 | 2.36 | CAACCAAACGUACUAUUAUAGAAU | | siRNA22 | ShortStack |
tcc-b1.1r1-1238 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6741618-6741634 | - | 6 | 2.83 | UUCUUCGGAAUGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1239 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6742681-6742747 | + | 29 | 13.70 | GGGAUUGUAGUUCAGC | miR11292 | OtherRNA | ShortStack |
tcc-b1.1r1-1240 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6750382-6750544 | + | 10 | 4.72 | AUCUCUAACUUUUCUGAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1241 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6780485-6780674 | + | 8 | 3.78 | AUGAAUCCUGCCACUUAUUCCGAG | | siRNA24 | ShortStack |
tcc-b1.1r1-1242 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6780796-6780933 | - | 5 | 2.36 | UAACUAGAACAAGUGAAGCGCC | | siRNA24 | ShortStack |
tcc-b1.1r1-1243 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6796461-6796701 | . | 9 | 4.25 | CAAUUAAAUGACGUGUAACAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1244 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6805337-6805647 | . | 25 | 11.81 | CUGAGAUCUGUGAUAUUCUAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1245 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6809560-6809653 | . | 7 | 3.31 | UCAUUCAGAUCUACAGACAUCAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1246 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6824326-6824437 | . | 5 | 2.36 | CGUUUGAUUCUGAUC | | OtherRNA | ShortStack |
tcc-b1.1r1-1247 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6850094-6850210 | - | 10 | 4.72 | AUGGAUCUGUCAGACACAAUGAG | | siRNA24 | ShortStack |
tcc-b1.1r1-1248 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6853554-6853569 | + | 16 | 7.56 | UCGCUGGGAGCUCCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1249 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6854967-6855096 | + | 84 | 39.68 | AGGUGGAUCUCUAAACCAAUUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1250 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6899365-6899556 | . | 7 | 3.31 | GAUCACGGAAUAGCAAAAACCAUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1251 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6899645-6899918 | . | 40 | 18.89 | GACGGUGACUGUGACGGAAGCGGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1252 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6911492-6911680 | . | 7 | 3.31 | CUUCUAUGUUAGAUCCGAAUGCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1253 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6913248-6913360 | . | 6 | 2.83 | UGGCGAAAUAGACAGGAAUGGAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1254 | Theobroma cacao (Cacao) 1.1 | scaffold_1:6972369-6972470 | . | 6 | 2.83 | AAUCUCUGUCGACACCGUCACUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1255 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7003726-7003845 | . | 5 | 2.36 | AAGCACGGGAUCUCU | miR4563 | OtherRNA | ShortStack |
tcc-b1.1r1-1256 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7010066-7010146 | . | 6 | 2.83 | UGGUUUCUGUUAUGAUUAUGACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1257 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7010757-7010914 | . | 10 | 4.72 | GUGUAGCGAUCUCUUGUACAAUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1258 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7011633-7011736 | . | 7 | 3.31 | ACGAUAUGAAUUUUUGAAGUUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1259 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7011937-7012153 | . | 37 | 17.48 | AAACGUGUUAAGAUAAAACUGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1260 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7020798-7020815 | + | 25 | 11.81 | CCAUCGGGCGUGCCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1261 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7052481-7052895 | . | 12 | 5.67 | AGAUCUUUUCAAGACCUUUCCAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1262 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7053711-7053910 | + | 6 | 2.83 | AAAACGUGAUUUCUGAUUUUGAA | | siRNA24 | ShortStack |
tcc-b1.1r1-1263 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7054119-7054507 | . | 16 | 7.56 | GAAGUCUAUGAUUCUGAAUAAGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1264 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7095471-7095500 | + | 12 | 5.67 | AAGGACUAACUACUAACUACCGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1265 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7100512-7100538 | . | 6 | 2.83 | ACACCGAUCUGGAGGUCUAGCAACC | | OtherRNA | ShortStack |
tcc-b1.1r1-1266 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7114084-7114143 | - | 6 | 2.83 | AUGAUGUUGACGUAGACGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1267 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7140036-7140118 | . | 13 | 6.14 | AUCGAUGAGAAACUCCGAACAGGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1268 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7160462-7160510 | - | 5 | 2.36 | CGAUUUUGUGUAGAAUAACUA | | siRNA21 | ShortStack |
tcc-b1.1r1-1269 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7160619-7160727 | - | 5 | 2.36 | AAUGAUAACGUGACAUGUUAGUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1270 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7177592-7177826 | . | 19 | 8.97 | AGUAACUGUUCUACUUGUAUUAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1271 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7177909-7178065 | + | 6 | 2.83 | UUCUUCUUUUGUAUCUAUUCACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1272 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7193948-7193965 | - | 10 | 4.72 | CGGCGAUGCACCCCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1273 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7274336-7274475 | . | 13 | 6.14 | AGACGAUCGGUGUAACAAAACGUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1274 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7290429-7290537 | . | 7 | 3.31 | CGAACCGAACUAACUGAAUUAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1275 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7305874-7306056 | - | 7 | 3.31 | UCAAGUAGUUUGUAGUAGGGGUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1276 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7371419-7371461 | + | 5 | 2.36 | GUGUCGAUGUCACGUGGUAGAUA | | siRNA23 | ShortStack |
tcc-b1.1r1-1277 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7373683-7373851 | . | 13 | 6.14 | AUCCAUUGACUGUAAUAUGAUUGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1278 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7386964-7387101 | - | 10 | 4.72 | UGCUAAGUUUGAUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1279 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7439349-7439448 | + | 5 | 2.36 | AUUGACGGUGUUUUGUAUUGAUGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1280 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7464424-7464500 | . | 6 | 2.83 | CAAUAUAAACGACUAAAAAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1281 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7465255-7465379 | . | 5 | 2.36 | UUUCGAUCUGUAGAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1282 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7466622-7466712 | + | 6 | 2.83 | AUGGGACUUUCCGAGAAAACUUGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1283 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7475982-7476204 | + | 12 | 5.67 | GUCGAUUCCGGAGGUUGCACCCCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1284 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7484208-7484314 | . | 6 | 2.83 | CUUUUCGAAUCCGUCCAUUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1285 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7495721-7496019 | . | 60 | 28.34 | AACCGUGGGAUCUGGUCGGGAAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1286 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7508965-7509303 | + | 14 | 6.61 | GGGUCAUUUGAGCUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1287 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7509401-7509566 | + | 14 | 6.61 | GAACUUCACUGGCUGCCAAGAUCUCGCAAAGCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1288 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7509684-7509765 | + | 8 | 3.78 | UUUGGAGUUGGAAUGUGAA | | OtherRNA | ShortStack |
tcc-b1.1r1-1289 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7516788-7516904 | . | 5 | 2.36 | UUAUUAUGUGAUUGAAGAUGACU | | siRNA23 | ShortStack |
tcc-b1.1r1-1290 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7519693-7519971 | - | 23 | 10.86 | AUGACGUGGUAAUGCUAACAUGGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1291 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7526596-7526667 | . | 5 | 2.36 | GUUAACGGUAUUUGCACUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1292 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7567254-7567334 | + | 30 | 14.17 | AACGACUGUGUAUUAGAAUAAGAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1293 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7573128-7573145 | + | 5 | 2.36 | AAGAACUUUGAAAAGAGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1294 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7596111-7596222 | + | 7 | 3.31 | AUAGAUCUCUUUAUAAUUUUAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1295 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7596823-7596907 | - | 5 | 2.36 | AAUAUGACGUGUAACAAUCUAACC | | siRNA24 | ShortStack |
tcc-b1.1r1-1296 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7653054-7653260 | - | 6 | 2.83 | GAUUGGGCUACUUGGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1297 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7653542-7653743 | . | 7 | 3.31 | AUAUUAUCUUCCCAACAAUC | | siRNA20 | ShortStack |
tcc-b1.1r1-1298 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7655309-7655615 | . | 12 | 5.67 | AUGAAUAGUCUGGUGAGGAAUGCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1299 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7655695-7655728 | + | 7 | 3.31 | AUGGACAUUGCGUGACUGACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1300 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7655824-7656011 | + | 15 | 7.09 | GUAUUGCGUGACUUGUAGUAAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1301 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7656609-7656933 | . | 12 | 5.67 | GAAUGGCGAGAUAGACU | | siRNA23 | ShortStack |
tcc-b1.1r1-1302 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7697183-7697263 | . | 7 | 3.31 | GUGGGAUCCGUGACA | | OtherRNA | ShortStack |
tcc-b1.1r1-1303 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7697591-7697952 | . | 14 | 6.61 | UCUUUUAGGUCGAGAAUGUGGACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1304 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7718056-7718155 | . | 13 | 6.14 | CUGAACCUGACACAUUCACGACUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1305 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7719518-7719697 | . | 6 | 2.83 | AGACGUGAUGAAAACUCUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1306 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7729038-7729190 | . | 10 | 4.72 | UGGGUUGUUGAUUAAAGACGUGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1307 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7762471-7762568 | + | 13 | 6.14 | AAUAACGUCUGUGUGUGUCUAAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1308 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7797516-7797730 | + | 6 | 2.83 | AAUCGAUCGAUCUAAGUUAU | | siRNA23 | ShortStack |
tcc-b1.1r1-1309 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7798470-7798514 | . | 6 | 2.83 | AGCCGAAUAACUGUAAUAACCACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1310 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7834059-7834172 | + | 7 | 3.31 | AAGAUCUUUUUAUCUACUCGAUAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1311 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7895863-7895983 | . | 8 | 3.78 | CGAAAAUCGGGUCUUGACACCA | | siRNA24 | ShortStack |
tcc-b1.1r1-1312 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7921353-7922478 | + | 371 | 175.23 | AUCUGAUCUUAUAACUGUACUGUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1313 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7924594-7924675 | - | 5 | 2.36 | UAUUGCCCUUGACUGGGUUGGUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1314 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7925525-7926725 | . | 326 | 153.98 | GACUACGACUGAUAAAGACUUAUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1315 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7953112-7953213 | . | 11 | 5.20 | UUGGUUAGGGAAAGAGAACGUGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1316 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7953429-7953491 | - | 5 | 2.36 | AAUUGUACUCUCUUAAACAACUCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1317 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7976345-7976378 | + | 6 | 2.83 | UGUGCACAAAUGGACUAGUAGCUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1318 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7978050-7978218 | . | 6 | 2.83 | UAUAGUGUAGGGUUUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1319 | Theobroma cacao (Cacao) 1.1 | scaffold_1:7998327-7998791 | . | 17 | 8.03 | CAGUUGUGAUAAUAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1320 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8023872-8024070 | . | 31 | 14.64 | GCGAUCUCUCGUCUCUGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1321 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8033249-8033265 | + | 23 | 10.86 | UCCGCUGUAGCACCCCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1322 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8141323-8141395 | - | 7 | 3.31 | AUGAUGAUGUGACAUACUGACAUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1323 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8166692-8166779 | - | 22 | 10.39 | ACGGACGUGAUCUCAUGACAGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1324 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8181725-8181825 | . | 9 | 4.25 | AAGAUUGUGCAACAAAGAUCAAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1325 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8181911-8182057 | . | 5 | 2.36 | AUUUCGAUUUGUAUGCCUAUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1326 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8182302-8182429 | - | 20 | 9.45 | AAGUGAUUUGUUGACAGCUUCAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1327 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8195863-8195968 | . | 5 | 2.36 | CGAAUAGUAGGAUGGUAAUAGAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1328 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8205852-8205939 | + | 6 | 2.83 | UUGGCAGACUUGAAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1329 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8207401-8207490 | - | 9 | 4.25 | AUUUUAUAUCUGUGACACUGAUGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1330 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8216606-8216726 | - | 19 | 8.97 | GGUUCUAUGGUGUAGUGGUUAGCACUCUGGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1331 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8256812-8256968 | + | 9 | 4.25 | UAAGAUGAGUUGGGAGAUCUUUAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1332 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8295315-8295428 | . | 5 | 2.36 | UGAGUGUCCUCUUCCUGUCUGUAA | | siRNA24 | ShortStack |
tcc-b1.1r1-1333 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8316422-8316508 | - | 153 | 72.27 | UCGGACCAGGCUUCAUUCCU | miR166 | nearMIRNA | ShortStack |
tcc-b1.1r1-1334 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8329343-8329509 | + | 5 | 2.36 | GAUGGACAGCAUACUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1335 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8345161-8345333 | . | 11 | 5.20 | AAAAUGUCACGGAUCUCAUAUCAG | | siRNA24 | ShortStack |
tcc-b1.1r1-1336 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8390627-8390782 | - | 5 | 2.36 | GCAAGACUACAAUGAAUAAAAGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1337 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8428353-8428450 | - | 5 | 2.36 | AGGAAAGAAGGCGUUUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1338 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8433931-8434012 | . | 5 | 2.36 | UCUAGAUAUGGAAUGUAAGACA | | siRNA24 | ShortStack |
tcc-b1.1r1-1339 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8444038-8444321 | . | 16 | 7.56 | CAUUGUCAGGUGGGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1340 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8458555-8458615 | + | 5 | 2.36 | AAAGUAAUUAUGGGUAGACGAAAG | | siRNA24 | ShortStack |
tcc-b1.1r1-1341 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8520336-8520403 | - | 20 | 9.45 | AGACGUGAACCUAAACAUAUGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1342 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8520490-8520666 | + | 14 | 6.61 | GAACAUUCUUCGUCAAGUAGACA | | OtherRNA | ShortStack |
tcc-b1.1r1-1343 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8520800-8520963 | + | 17 | 8.03 | AUUGUGUGACUUAGGCAUUGCUUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1344 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8529984-8530069 | - | 5 | 2.36 | CUUAAUCAUUGUAUCUUUAGAGCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1345 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8533304-8533521 | - | 10 | 4.72 | GACGUGUAAGAACCUAACCAUGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1346 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8533810-8533954 | . | 5 | 2.36 | AAAACACCUAUUUCAACUAAAAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1347 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8535401-8535515 | + | 89 | 42.04 | UCGCGCGGCCCCUGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1348 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8539708-8539842 | - | 7 | 3.31 | AAAUAUGGUAACUGAUGAUAUGGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1349 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8540402-8540481 | . | 7 | 3.31 | AUGGGCUAUGGGAACUUCUUUGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1350 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8542086-8542270 | + | 6 | 2.83 | CUUCUUGAGUCACUAUCACAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1351 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8561702-8561783 | . | 8 | 3.78 | UAUCUCGCCAUCUAUUUCUCUUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1352 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8561987-8562182 | - | 9 | 4.25 | ACUGGUUUUUAGACAUUGUGUGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1353 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8562336-8562607 | . | 12 | 5.67 | AAAGGAUAUGAGUUGAUUUGAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1354 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8565171-8565267 | - | 5 | 2.36 | CGAACUAUCUAAAAAACCGAACU | | siRNA23 | ShortStack |
tcc-b1.1r1-1355 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8599924-8600000 | + | 20 | 9.45 | UUCCAUGAUUCCUCGUAUUUAAGUCUCUGAUGAUC | | OtherRNA | ShortStack |
tcc-b1.1r1-1356 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8607602-8607771 | . | 7 | 3.31 | ACUUUGCGUGACUGAUUGAUGGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1357 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8632008-8632579 | . | 179 | 84.55 | CGUGAACUAGCUGAACUCUUG | | siRNA21 | ShortStack |
tcc-b1.1r1-1358 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8632740-8633013 | . | 41 | 19.37 | AAGGAACAGAUAGGGAGGCUC | | siRNA21 | ShortStack |
tcc-b1.1r1-1359 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8633233-8633445 | . | 46 | 21.73 | CUGAUUUGCUGAACAACCAUC | | siRNA21 | ShortStack |
tcc-b1.1r1-1360 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8634292-8634453 | . | 6 | 2.83 | CCUGCGCCUGUAUUCCUCUGU | | siRNA21 | ShortStack |
tcc-b1.1r1-1361 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8634638-8635210 | . | 32 | 15.11 | UUUGAGACAAUACUGAAAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1362 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8656724-8656741 | - | 32 | 15.11 | CCAUCGGGCGUGCCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1363 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8658805-8659184 | . | 17 | 8.03 | AUCCGGUUUAGUCAAGAUCAGACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1364 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8663987-8664222 | . | 64 | 30.23 | AACCGUGGGAUCUGGUCGGGAAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1365 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8669502-8669695 | + | 8 | 3.78 | UUCUGUGUGCUUGUCUGACCAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1366 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8694660-8694843 | + | 9 | 4.25 | UGGCAAGCCCAACUCUAUAAAA | | siRNA22 | ShortStack |
tcc-b1.1r1-1367 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8696714-8696850 | . | 14 | 6.61 | UUGCGUAGGGCAUCUAACCGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1368 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8697915-8698076 | - | 5 | 2.36 | CAUGUGGAUCUUAAUGACGUCAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1369 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8724742-8724885 | + | 5 | 2.36 | AAAUCUCCUAAUCAGUUUCCCAUGUCCAAGUUGCAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1370 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8725384-8725540 | + | 8 | 3.78 | UUAACGCCAAGGACAUGUUGGAGAGACUGAGAGGGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1371 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8725895-8726015 | + | 9 | 4.25 | ACUGGGCUGAAUUUCUUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1372 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8726167-8726647 | + | 25 | 11.81 | UCUAUGGUCUUAGAUA | miR403 | OtherRNA | ShortStack |
tcc-b1.1r1-1373 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8773937-8774131 | + | 5 | 2.36 | CCCCUCCAUCUCCACCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1374 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8778012-8778185 | . | 12 | 5.67 | AAUACGACGUUGUUUUCAUGGACC | | siRNA24 | ShortStack |
tcc-b1.1r1-1375 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8779154-8779344 | . | 10 | 4.72 | AGGAUCUUGACAUUAUACUGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1376 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8793096-8793414 | . | 41 | 19.37 | AUCUGACCGCGAGAAGCACCGAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1377 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8796421-8796520 | . | 8 | 3.78 | UACCCAAAUCCAUUCCGAACUCGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1378 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8835451-8835667 | - | 7 | 3.31 | UUUGAUGGUAUCCGU | miR4951 | OtherRNA | ShortStack |
tcc-b1.1r1-1379 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8863143-8863160 | - | 13 | 6.14 | AACCAUGUGGGCUCU | miR156 | OtherRNA | ShortStack |
tcc-b1.1r1-1380 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8877089-8877309 | - | 43 | 20.31 | AUCUGUGUACAAUAAGCCGAUGCUCUGGAAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1381 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8899186-8899238 | . | 6 | 2.83 | AUGUACGGUAUCUCGAUGAAAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1382 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8915109-8915126 | - | 14 | 6.61 | UUCAGGGAGGUAGUGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1383 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8932312-8932354 | - | 6 | 2.83 | AUUUAAGUGGACGUUACUGGAGAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1384 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8954915-8955007 | - | 8 | 3.78 | ACUCUCUAUAGUAUCUGAACAUUU | | siRNA21 | ShortStack |
tcc-b1.1r1-1385 | Theobroma cacao (Cacao) 1.1 | scaffold_1:8990156-8990776 | . | 36 | 17.00 | AUCCUAUUGUAGCCUACCAUUGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1386 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9048379-9048567 | . | 9 | 4.25 | ACCUAUAAGGACUUGGACUGGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1387 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9064644-9064847 | . | 21 | 9.92 | AAGAACGUAGACUAGUUUAAGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1388 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9065038-9065230 | + | 5 | 2.36 | UCGGGGCUAUUUUCUCAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1389 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9087658-9087741 | - | 5 | 2.36 | ACUAAACAGUGGGCUGCAUUGAU | | siRNA22 | ShortStack |
tcc-b1.1r1-1390 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9092340-9092535 | + | 6 | 2.83 | AUGGGUCUAUGGAUGGAACACUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1391 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9159071-9159175 | + | 7 | 3.31 | AGAACGGAAUAUGAUAGCGAAUGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1392 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9182354-9182434 | + | 10 | 4.72 | UCUAUAUCGACCAGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1393 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9205708-9205755 | - | 8 | 3.78 | CAAUUUAACCAUGACAUGUCACAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1394 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9213931-9214165 | + | 7 | 3.31 | AAGAAGCUGUACGAGAAUAGGUAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1395 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9266867-9267110 | . | 11 | 5.20 | UCAUACCUGUCUUCUCU | | siRNA21 | ShortStack |
tcc-b1.1r1-1396 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9273704-9273854 | + | 5 | 2.36 | AAUGGAAGAGGGAAAUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1397 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9281472-9281631 | - | 5 | 2.36 | CUUAAUCUGGCGUGUCACA | | siRNA24 | ShortStack |
tcc-b1.1r1-1398 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9308726-9308847 | + | 10 | 4.72 | GCUGUGCCCGUGGACGUAGGUCAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1399 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9315101-9315129 | - | 6 | 2.83 | AUUGAUUGGGUUAGAUCUUGAGCG | | OtherRNA | ShortStack |
tcc-b1.1r1-1400 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9315201-9315274 | - | 5 | 2.36 | CUGUGCCCGUGAACGUAGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1401 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9330776-9330869 | - | 5 | 2.36 | AACAAACUCUCUGGUUCCAUUCCC | | siRNA24 | ShortStack |
tcc-b1.1r1-1402 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9348417-9348874 | . | 41 | 19.37 | AAUGGUCUCCUGUAACAUGCUACG | | siRNA24 | ShortStack |
tcc-b1.1r1-1403 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9349016-9349122 | + | 7 | 3.31 | ACUUGCUGAGUAGUUGGACUCACC | | OtherRNA | ShortStack |
tcc-b1.1r1-1404 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9349201-9349427 | . | 28 | 13.23 | UUUGGAGAUUUAAUUUUGAAUAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1405 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9398363-9398480 | - | 7 | 3.31 | CUAUGUGAUCUUGACGUGAUAUAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1406 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9462938-9463118 | . | 11 | 5.20 | AAUCGUGUCGUGUCUUAUAUUGACG | | siRNA24 | ShortStack |
tcc-b1.1r1-1407 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9463568-9463597 | - | 12 | 5.67 | AACGUGUCAGAUCUGAAUAAUAUA | | nearMIRNA | ShortStack |
tcc-b1.1r1-1408 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9468709-9468936 | . | 14 | 6.61 | UGCUAGAGAGAGAAAGUGAGGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1409 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9469970-9470084 | + | 6 | 2.83 | CUAGGUGAGGAGGAUUUCGAGACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1410 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9471380-9471510 | + | 15 | 7.09 | GAUUAUGACGUGGUAUACUGAUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1411 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9472484-9472666 | . | 8 | 3.78 | GAGGUCAUGAAUGGGCUAUGGGA | | siRNA23 | ShortStack |
tcc-b1.1r1-1412 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9492216-9492294 | . | 5 | 2.36 | UGAGGAACAAGAAGA | miR1249 | OtherRNA | ShortStack |
tcc-b1.1r1-1413 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9558475-9558549 | + | 10 | 4.72 | AUUGAUUGAUUGAUUGUUGUAG | | siRNA22 | ShortStack |
tcc-b1.1r1-1414 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9591358-9591480 | - | 13 | 6.14 | UAAUCGUGUCGUGUCAUGUUACA | | siRNA24 | ShortStack |
tcc-b1.1r1-1415 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9591684-9591988 | . | 16 | 7.56 | UUAAACGUGUUUGUCGUGUCUGAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1416 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9605905-9606036 | . | 6 | 2.83 | AUAGAUAAAUCUUGACGUAAAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1417 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9606164-9606281 | . | 6 | 2.83 | AAUUGAUAUAGAUAAGUUUUGACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1418 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9610184-9610275 | . | 6 | 2.83 | UCGAUCGGCAUUCGAGGUAAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1419 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9616461-9616506 | . | 6 | 2.83 | CUUCCUAUCUAAAGAGUAGAAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1420 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9637494-9637591 | . | 5 | 2.36 | AUAGAAGUAGACGAGAAUAGAAUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1421 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9658691-9658707 | - | 5 | 2.36 | GGGGAUAUAGUUCAGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1422 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9671652-9671858 | . | 8 | 3.78 | AAAGGGUGUUUUUGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1423 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9681454-9681674 | . | 6 | 2.83 | CUAGACUAAAUAGACACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1424 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9683292-9683526 | . | 12 | 5.67 | GUAAUAGACUACUGUAAUGU | miR2804 | siRNA24 | ShortStack |
tcc-b1.1r1-1425 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9684558-9684676 | . | 8 | 3.78 | UCAACGUGUAGAUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1426 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9695689-9695799 | + | 5 | 2.36 | ACUCUAGUCCUACUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1427 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9696686-9696743 | . | 6 | 2.83 | CGUAUCAAUCGUGUUAUCAUGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1428 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9697020-9697153 | . | 9 | 4.25 | GUCUUAAAUCUGAAACAUGUAUC | | OtherRNA | ShortStack |
tcc-b1.1r1-1429 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9726785-9726875 | . | 7 | 3.31 | AUUACAUCCCUCAGCUGUAGUGUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1430 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9742737-9742938 | . | 5 | 2.36 | UUGGAUCUUAGAUAUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1431 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9743788-9743887 | - | 24 | 11.34 | AUUCGGACUAACGGGUAUAGGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1432 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9761271-9761538 | . | 6 | 2.83 | GUCACUGGACCUAUUAUUGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1433 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9810145-9810189 | - | 19 | 8.97 | AAUGACGUACUACUUGAUCUGUGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1434 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9813482-9813759 | . | 18 | 8.50 | AUUGUCAGGUCUAAAAAUAAGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1435 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9814035-9814198 | . | 15 | 7.09 | UUUGGAUUUAGUCUUAACGUACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1436 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9816746-9816832 | + | 26 | 12.28 | GUGUAUCGCGCACGGACGAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1437 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9836304-9836602 | . | 89 | 42.04 | AGGAUUUGGCCCGAACUGUUCGGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1438 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9843188-9843324 | . | 7 | 3.31 | AGACUUCGAAACAAAAUGAAUGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1439 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9876011-9876158 | . | 6 | 2.83 | UUUGGUAUUGCAGUUCAGAUUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1440 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9894975-9895653 | . | 47 | 22.20 | GUGUCAAAGGACUGUAGUAGUUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1441 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9934022-9934338 | . | 7 | 3.31 | CACCAAAGGGCUUUCUACUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1442 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9971535-9971733 | . | 5 | 2.36 | ACAAAACUGUCUCUGUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1443 | Theobroma cacao (Cacao) 1.1 | scaffold_1:9971822-9972062 | + | 6 | 2.83 | UCGGUGUGUAACAUCUUCUGCUA | | OtherRNA | ShortStack |
tcc-b1.1r1-1444 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10064511-10064702 | + | 6 | 2.83 | UUACAUGCUCUUGAUUUAAACGGU | | siRNA22 | ShortStack |
tcc-b1.1r1-1445 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10102820-10102892 | . | 9 | 4.25 | UCAAUACACAAAUGUAUAACUCCC | | OtherRNA | ShortStack |
tcc-b1.1r1-1446 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10111764-10111830 | + | 7 | 3.31 | GUUUAUUCAAUAAUGACUGUGUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1447 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10112851-10112878 | - | 8 | 3.78 | AUCCUCUUAUUCUGCAUGAACAUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1448 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10184329-10184460 | . | 8 | 3.78 | AAAGGAUGAUGUUAGCGUUGACGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1449 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10225568-10225730 | . | 15 | 7.09 | AAACGUGUCGUGUUCGUAUUUAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1450 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10226746-10226929 | + | 5 | 2.36 | AUAUUCUCUUAUUCUGCAUGAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1451 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10227976-10228189 | - | 6 | 2.83 | AAAACAGUAGAAUAUUAAGAAAUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1452 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10270579-10270780 | + | 6 | 2.83 | CUUUGAUACUGUCGUAACUUGC | | siRNA22 | ShortStack |
tcc-b1.1r1-1453 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10286096-10286238 | . | 6 | 2.83 | AGACUGCUAGAUACACUCGAGGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1454 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10287565-10287608 | . | 5 | 2.36 | CACUCUCUAUCGAUUUUUUCUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1455 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10287717-10287782 | - | 10 | 4.72 | UUGUGUCGAUGACAUGGUUGA | | siRNA21 | ShortStack |
tcc-b1.1r1-1456 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10296775-10296876 | + | 10 | 4.72 | CUGUGCUCAUUGGUGCUGCAGCAGUUGGCUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1457 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10297541-10297642 | + | 9 | 4.25 | CUGACAAGAAGUCCAUAACUGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1458 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10297934-10298340 | + | 33 | 15.59 | GUGGGACACAGUACUACAUCGUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1459 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10321205-10321381 | . | 5 | 2.36 | UUACGGUCAAAUUGUUCAGAUGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1460 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10333181-10333274 | - | 8 | 3.78 | AACGUGUGCUGUGAAGAUGAAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1461 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10341167-10341235 | . | 5 | 2.36 | ACGACCCGGAACUCCCAUCGAGCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1462 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10341812-10342014 | . | 7 | 3.31 | CUCGAGUAAACUAAUGACAACAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1463 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10343051-10343113 | . | 7 | 3.31 | AACUCCAUUUACAAAUUCAGCUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1464 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10356191-10356287 | - | 7 | 3.31 | UACUGAGAAUAUGAUUGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1465 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10367461-10367781 | . | 17 | 8.03 | UGGAACUUGUUAUCAUCUUUA | | siRNA21 | ShortStack |
tcc-b1.1r1-1466 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10368429-10368594 | + | 6 | 2.83 | GAAACGAUUUGUUGUAGAGAC | | siRNA21 | ShortStack |
tcc-b1.1r1-1467 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10369587-10369645 | . | 6 | 2.83 | GGCGGCGACGUGGGA | | OtherRNA | ShortStack |
tcc-b1.1r1-1468 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10374649-10374786 | . | 12 | 5.67 | ACAGGAAUGAAAUAGAAUAGUUAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1469 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10376809-10376862 | + | 12 | 5.67 | AAGGCUCUAACGAUCAUGUUGUAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1470 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10377458-10377598 | . | 6 | 2.83 | CAAAUGGAUAAAAGAUGGACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1471 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10403700-10403827 | + | 10 | 4.72 | UCUCUGAAGUGAAUGCGACAUCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1472 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10416323-10416575 | . | 8 | 3.78 | UUGGAUUUAAUUGCAAAAACGUGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1473 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10423764-10423909 | . | 8 | 3.78 | ACUAUGGUUGGUCAAGGUAGAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1474 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10437833-10438015 | . | 9 | 4.25 | GCGGAUUCGAGAGAACGUUCUCGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1475 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10439562-10439962 | - | 7 | 3.31 | UGACGAGGCUGAAAAAGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1476 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10451157-10451172 | + | 15 | 7.09 | CCGGGCUCAGACGCCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1477 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10460050-10460182 | . | 7 | 3.31 | AGGAUUUGCAUUCAUGAAAACACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1478 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10460467-10460631 | . | 12 | 5.67 | AAUCUAAAAGGUACGUAGACCAG | | siRNA24 | ShortStack |
tcc-b1.1r1-1479 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10527501-10527689 | + | 12 | 5.67 | UGUGCUCGUGUGUCUUAUUGAA | | OtherRNA | ShortStack |
tcc-b1.1r1-1480 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10528522-10528832 | + | 24 | 11.34 | GAGGUCUUGUUGAAAACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1481 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10528970-10529150 | + | 9 | 4.25 | AUUGAAGUGAUGGCGUAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1482 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10544855-10544959 | . | 5 | 2.36 | AAAAUGUGAAUGAUUACUCUGAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1483 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10547038-10547086 | - | 5 | 2.36 | GAGACGGACUGUUUAUUUGAAUAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1484 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10549919-10550134 | . | 15 | 7.09 | AAAAACUACUGAAUUCCAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1485 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10579779-10579988 | . | 9 | 4.25 | AAUCUGAAGAUCCAAACAAAACUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1486 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10582236-10582341 | + | 5 | 2.36 | CCCCACGUGAAUGUGUAACUCGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1487 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10587525-10587555 | . | 6 | 2.83 | CAAGAUCUUUAGAACAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1488 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10614472-10614671 | . | 6 | 2.83 | UUUUCAGAUUCAGAGGCAGU | | siRNA20 | ShortStack |
tcc-b1.1r1-1489 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10654421-10654514 | - | 5 | 2.36 | ACUUUGUACCUUGACUCUCAACU | | siRNA23 | ShortStack |
tcc-b1.1r1-1490 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10670764-10670787 | - | 7 | 3.31 | ACGACCCGGAACUCCCAUCGAGCA | | siRNA24 | ShortStack |
tcc-b1.1r1-1491 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10694337-10694458 | . | 20 | 9.45 | AAAUUAGGAGAUUACAAGAACAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1492 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10695927-10696123 | . | 5 | 2.36 | GUGGACGUAUCUUCUGAACGC | | siRNA22 | ShortStack |
tcc-b1.1r1-1493 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10750533-10750739 | - | 6 | 2.83 | UGACCUACUCCCGACACUCUCGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1494 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10770163-10770392 | . | 12 | 5.67 | CCAAUCUUCAGGCACAAUCUCUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1495 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10772310-10772587 | . | 11 | 5.20 | GAAAGUGGACCGCUAGAUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1496 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10778930-10779022 | . | 5 | 2.36 | UGAUGUGGGAUUCGUGAUAUUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1497 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10782309-10782452 | - | 5 | 2.36 | UUUAUAUCGGGUUUGUCUAUAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1498 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10839465-10839662 | + | 6 | 2.83 | AUCUGAACGGUCGCCGAUCUUAGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1499 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10841652-10841751 | . | 6 | 2.83 | UAGAUCUAAAAAAUCGUAGACUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1500 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10861547-10861675 | + | 5 | 2.36 | AUGAAAAAUGCCUGUAUGUAUAAG | | siRNA24 | ShortStack |
tcc-b1.1r1-1501 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10872307-10872412 | + | 5 | 2.36 | AAAUUCUACUGCAAUGAACUCAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1502 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10933418-10933716 | + | 7 | 3.31 | GCAAUGUGUCUAGGAGGAGAACCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1503 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10934003-10934119 | - | 10 | 4.72 | AAAAUUUCGACAGUAUAACGUGGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1504 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10950603-10950634 | + | 5 | 2.36 | GUUCAGAUCUAUAACUCAACAUAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1505 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10950812-10950991 | . | 8 | 3.78 | UGAUGACUGCAUUAUAG | miR2733 | OtherRNA | ShortStack |
tcc-b1.1r1-1506 | Theobroma cacao (Cacao) 1.1 | scaffold_1:10980665-10980744 | . | 10 | 4.72 | CCAACGGACCAGUUGAUGUGAACC | | siRNA24 | ShortStack |
tcc-b1.1r1-1507 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11004653-11004765 | - | 10 | 4.72 | UCUUCCGACUGACCUUUUUGUAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1508 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11005206-11005620 | . | 11 | 5.20 | AUCUAGAAUCAAACGCUCUGACCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1509 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11017092-11017236 | . | 9 | 4.25 | CUGAGGAUGGGAUGAUCGGUCGGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1510 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11018094-11018270 | . | 6 | 2.83 | ACUAGUGGGACCCAAAGACACAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1511 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11045738-11045791 | + | 7 | 3.31 | CCCGAACCCGUCGGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1512 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11120596-11120726 | + | 7 | 3.31 | GAGGAAGGAUCAUUG | miR8958 | OtherRNA | ShortStack |
tcc-b1.1r1-1513 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11121358-11121375 | + | 14 | 6.61 | GCAGUUGGACGUGGGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1514 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11148498-11148523 | + | 5 | 2.36 | AAUGACGUGUUAGUACUAUGUAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1515 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11150823-11150944 | - | 9 | 4.25 | AUGCUGACGUGAUAUUGAUAUGAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1516 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11151726-11151940 | . | 11 | 5.20 | ACCAAAUCUGAUUGUGAGAAGUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1517 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11181861-11182057 | . | 5 | 2.36 | GUGUCACAAACUCUGAACCCUAUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1518 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11182506-11182621 | + | 6 | 2.83 | AUCUGAAUGCCAUAUCCGAAAUCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1519 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11217896-11217949 | . | 14 | 6.61 | UAGGUUGACUAGAAUUCUAUAUCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1520 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11233328-11233513 | . | 6 | 2.83 | GAUGUGUGACCCGAUAGAGAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1521 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11258631-11258909 | . | 26 | 12.28 | ACGUCGAUCUGGCACACUAUGUGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1522 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11259421-11259590 | . | 9 | 4.25 | CACGUUUGGUUCGCGGAAUAGAUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1523 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11269818-11270010 | . | 13 | 6.14 | AGGGAAUAGCUAUUACUGACUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1524 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11270282-11270425 | - | 25 | 11.81 | ACGACUGGAUCUGGCCGUGGAGUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1525 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11282487-11282550 | + | 5 | 2.36 | UCUCUGUAGCUCACCACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1526 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11283673-11283826 | . | 7 | 3.31 | ACAGAUCAGUUGGAGGGAUCCAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1527 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11292004-11292251 | . | 19 | 8.97 | AAAGAUCGAAAGGAACAUUCAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1528 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11329454-11329567 | + | 6 | 2.83 | GAGGUUGAGAGCUCUGACACC | | OtherRNA | ShortStack |
tcc-b1.1r1-1529 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11333041-11333219 | . | 7 | 3.31 | AUCCGUCAUUUUUGGAACUAUCUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1530 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11333310-11333707 | . | 11 | 5.20 | AGAAGAUGUACAUGAACAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1531 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11334562-11334689 | . | 5 | 2.36 | UUUCUAUUUGGACAGUUGCUGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1532 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11366067-11366196 | . | 5 | 2.36 | CUCUGAACGCUGGCAUGUC | | OtherRNA | ShortStack |
tcc-b1.1r1-1533 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11399122-11399357 | . | 12 | 5.67 | CAGCUCUCUCUAAUUUUAUUGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1534 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11415073-11415190 | + | 6 | 2.83 | CUCUAUAUUAUCUUUGCGAUUCGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1535 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11415610-11415775 | . | 6 | 2.83 | AAUCGUGUCGUGUCGUAUAUUGAC | | siRNA21 | ShortStack |
tcc-b1.1r1-1536 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11436079-11436258 | . | 18 | 8.50 | UAGAAAUGACAUGUUGACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1537 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11446724-11446800 | - | 6 | 2.83 | GACCAGAAAAUGACAAGAACGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1538 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11453369-11453553 | . | 5 | 2.36 | AGCCAAGACAGUUCUACAAGUUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1539 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11476388-11476531 | - | 5 | 2.36 | UUGAAGGAUUUAAGUUGCUUGAAG | | siRNA24 | ShortStack |
tcc-b1.1r1-1540 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11486022-11486193 | . | 6 | 2.83 | AUGUACGAUCUCUCGAUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1541 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11502785-11502895 | . | 5 | 2.36 | GAUGCUGUUGGAGAGUUAGACGGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1542 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11506493-11506530 | + | 14 | 6.61 | UAUGAGUGCUCUCCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1543 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11508446-11508613 | - | 7 | 3.31 | AAACUGUCAAGGACU | miR319 | OtherRNA | ShortStack |
tcc-b1.1r1-1544 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11562159-11562339 | - | 10 | 4.72 | GCAUGGUCUCGAUUCCAAUCAUGGAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1545 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11576723-11576920 | - | 16 | 7.56 | CUCAUUUUGGAGAACUUGAUAACUUUGUUGGAUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1546 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11577659-11577790 | - | 17 | 8.03 | UUAAGGCUAAUGGCUCAAAGAAGGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1547 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11577912-11578093 | - | 8 | 3.78 | ACUGAACUCAGGAUUCAAAGCUCUUAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1548 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11578520-11578565 | - | 8 | 3.78 | CCCGCUUUUCAGUCCGAUCAAUGGCUGACUCU | | OtherRNA | ShortStack |
tcc-b1.1r1-1549 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11619865-11619900 | + | 5 | 2.36 | UCUAACCGAUUAAGAGAUCUCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1550 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11640851-11640899 | . | 5 | 2.36 | UCACCAACUCUGAACUCUGGAGUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1551 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11656896-11656995 | . | 7 | 3.31 | CACUUUUGGAUGAUCUAUGAAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1552 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11657430-11657508 | . | 7 | 3.31 | AACCGUACUCUUGAAUCCAAUUCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1553 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11658036-11658097 | . | 6 | 2.83 | CUCUGUCGAGUCUCAAUUAGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1554 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11659650-11659667 | + | 6 | 2.83 | UUAGACCUUCGGAAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1555 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11667769-11668373 | + | 37 | 17.48 | UGACUGAUAUAGUGCAUGUGUAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1556 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11668467-11668483 | - | 8 | 3.78 | UUGUCGCUCUGAUUCGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1557 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11670439-11670488 | + | 5 | 2.36 | UUGGUCUUGAAAAGUGUUGGGGGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1558 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11671375-11671492 | . | 24 | 11.34 | ACCUUCGGGUGUAUCUAGCAGUCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1559 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11686266-11686491 | + | 23 | 10.86 | UUGUUGGUAGAACCAUGAGGGCUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1560 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11687458-11687498 | + | 12 | 5.67 | UGGUACCCUAGUUGAGCAUGGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1561 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11690958-11691160 | - | 5 | 2.36 | CGAACUGAACUAACCGAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1562 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11707982-11708040 | . | 6 | 2.83 | UCCGGCAUGCAUAUAAUUUUGAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1563 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11827366-11827409 | . | 5 | 2.36 | UUCUUUCCAGUGAACCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1564 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11852876-11853113 | . | 24 | 11.34 | AAGUAAGGUAGAAUGUCACAGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1565 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11853932-11854255 | . | 48 | 22.67 | AAACGUGAGCUCGUAAUAAGUGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1566 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11854339-11854548 | . | 6 | 2.83 | AACGUGGAACCAUGUGAGUGUAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1567 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11869917-11870169 | . | 11 | 5.20 | UUAUUUCUACCAACCAAACACUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1568 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11899559-11899593 | - | 5 | 2.36 | AAACUUAGGUCUGGUAGU | | siRNA22 | ShortStack |
tcc-b1.1r1-1569 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11902800-11902918 | - | 5 | 2.36 | GUGUCUAACGAGGGUGCGGGGU | | siRNA23 | ShortStack |
tcc-b1.1r1-1570 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11903100-11903250 | + | 5 | 2.36 | CUAACGAGGGUAAGUAAAUAUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1571 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11908637-11908755 | . | 5 | 2.36 | UAGAAUUCUGAUGGACCCUAC | | siRNA23 | ShortStack |
tcc-b1.1r1-1572 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11934917-11934982 | + | 6 | 2.83 | ACAACGACUCACGGU | miR172 | OtherRNA | ShortStack |
tcc-b1.1r1-1573 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11944873-11945103 | . | 8 | 3.78 | CAAAAUCGUUGUUCAUCGCUU | | siRNA21 | ShortStack |
tcc-b1.1r1-1574 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11945455-11945686 | - | 13 | 6.14 | UUUUAGGCAUUGCGUAACUGG | | OtherRNA | ShortStack |
tcc-b1.1r1-1575 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11980229-11980562 | . | 16 | 7.56 | AACGAUGUUUGUAUUUUUAUGAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1576 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11982660-11982786 | . | 7 | 3.31 | GAUUUACUUGUGAAUUUGAGGUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1577 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11986423-11986515 | . | 6 | 2.83 | AAUCUCUUCUGGUGGCUAAAA | | siRNA24 | ShortStack |
tcc-b1.1r1-1578 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11988172-11988307 | . | 9 | 4.25 | AACGUGUCACGGCUGUUCAUGGGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1579 | Theobroma cacao (Cacao) 1.1 | scaffold_1:11990024-11990224 | . | 5 | 2.36 | AGGACCGAUCUGUGGUUGAGGAGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1580 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12014413-12014578 | . | 13 | 6.14 | UAUCUGUCUGUUGUGCUCUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1581 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12044569-12044935 | . | 18 | 8.50 | UGAGUGCAUGCAGAUUUCUGUGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1582 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12045018-12045360 | . | 27 | 12.75 | GCUGACUUCUUGUAGUAUUAUGGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1583 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12064236-12064317 | - | 6 | 2.83 | UGUGGAUCAUCCUGUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1584 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12079222-12079269 | + | 8 | 3.78 | AUGACGUGGCGUAACGUUCUCAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1585 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12079393-12079424 | . | 5 | 2.36 | CACGUCACGUCAUAAUUUGAACCG | | siRNA24 | ShortStack |
tcc-b1.1r1-1586 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12088209-12088332 | + | 10 | 4.72 | GUAAGAAUAGAAUAAAGUAGGAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1587 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12093115-12093221 | . | 6 | 2.83 | AUGCUGACUGUGAUUUGGGUUUGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1588 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12103867-12104452 | - | 877 | 414.22 | UCCCAAUGAGGAAGAAUUCCCAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1589 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12171830-12171972 | + | 8 | 3.78 | CGGGGAAUAAGGGUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1590 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12189239-12189395 | - | 5 | 2.36 | UGACAUGUGGACCCACGAGCGACC | | siRNA24 | ShortStack |
tcc-b1.1r1-1591 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12203155-12203273 | + | 5 | 2.36 | AAAAGACUUCUGACGACCAACGUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1592 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12215697-12215971 | . | 25 | 11.81 | UUAUUUACGGACUUGCAAGGU | | siRNA21 | ShortStack |
tcc-b1.1r1-1593 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12233642-12233692 | + | 8 | 3.78 | UUAUCAUGACGUGUAAUAAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1594 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12235208-12235326 | . | 8 | 3.78 | CAUGACGUGUCACCAACUCUUAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1595 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12245431-12245617 | . | 7 | 3.31 | UUGAUGUCAUCUCUGCUAUAA | | siRNA24 | ShortStack |
tcc-b1.1r1-1596 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12248288-12248421 | . | 5 | 2.36 | ACGAUAGCUUGACGACUCCACUAG | | siRNA22 | ShortStack |
tcc-b1.1r1-1597 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12259158-12259236 | . | 8 | 3.78 | AAGUCCGUCUAAAGAAUAAUAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1598 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12283124-12283138 | - | 5 | 2.36 | UACAGUCCGACGACC | | OtherRNA | ShortStack |
tcc-b1.1r1-1599 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12308333-12308527 | . | 5 | 2.36 | AGGCUCUGCACCUCAAUCCGAAAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1600 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12308745-12309091 | + | 17 | 8.03 | ACUAGUUCGUAAGGCAUUGUGUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1601 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12315636-12315757 | - | 7 | 3.31 | CUCACCGGAGUAUAACAAGAUUAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1602 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12315914-12316008 | + | 7 | 3.31 | UGAAACCGAACUAAUUCUGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1603 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12316335-12316374 | . | 5 | 2.36 | AAAUAUAAACCGAACUGAACGACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1604 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12316665-12316729 | . | 6 | 2.83 | UGUUAAUCUGUCAUAUCCGUCACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1605 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12366998-12367311 | - | 6 | 2.83 | GCCGAUCACCCGAAUACAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1606 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12391701-12391927 | + | 9 | 4.25 | AGGGUUUAGAGUGUGUGACACGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1607 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12407158-12407226 | + | 17 | 8.03 | AAGAAUCUCGGAAUUUUGAAAACG | | siRNA24 | ShortStack |
tcc-b1.1r1-1608 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12412009-12412097 | . | 7 | 3.31 | CCAUGAUCAUGUUUGUAGACAGCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1609 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12414218-12414392 | . | 6 | 2.83 | AAAAGAAGAAGUUGUACGUGAACA | | siRNA21 | ShortStack |
tcc-b1.1r1-1610 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12419654-12419770 | . | 6 | 2.83 | UGGAGUUGGUGGUCGGAGCCC | | siRNA21 | ShortStack |
tcc-b1.1r1-1611 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12422755-12422790 | + | 7 | 3.31 | AUGACGUGACAUGUUAAUUUGACA | | siRNA24 | ShortStack |
tcc-b1.1r1-1612 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12428190-12428332 | . | 6 | 2.83 | ACGUCUAACUUCGUAUUGCACUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1613 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12452870-12452989 | + | 5 | 2.36 | AGACUGAUUUUUAGGUAUUGCGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1614 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12472130-12472262 | . | 5 | 2.36 | CAGACUCUAUAUGAAUGCAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1615 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12480197-12480368 | . | 7 | 3.31 | AUGUCUUCGUUGCACUGACUCUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1616 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12497128-12497245 | . | 7 | 3.31 | GUUUCGGGUUGAGAUGCGGAGCCC | | siRNA24 | ShortStack |
tcc-b1.1r1-1617 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12503409-12503427 | - | 76 | 35.90 | CCUGUUGAGCUUGAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1618 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12505609-12505889 | + | 185 | 87.38 | CCGCUGUAGCACAAA | | OtherRNA | ShortStack |
tcc-b1.1r1-1619 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12516513-12516607 | . | 20 | 9.45 | UCCGGGGACUCCCUCAAACGACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1620 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12517440-12517655 | . | 9 | 4.25 | CAAGUGAAAAACUCAGUCUGUCA | | siRNA24 | ShortStack |
tcc-b1.1r1-1621 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12550378-12550502 | . | 6 | 2.83 | ACGACAGCUGGCGACUCCACUAGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1622 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12668119-12668193 | . | 5 | 2.36 | AUUCUCUGAAGUGAGUGCGACAUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1623 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12701899-12701945 | + | 5 | 2.36 | AGUGUUGGACAGUGCUACGAUCGUUAACUUCGUUGAAGAUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1624 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12702087-12702256 | + | 5 | 2.36 | CAGACCCCAAGGAGCUC | | OtherRNA | ShortStack |
tcc-b1.1r1-1625 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12758725-12758892 | . | 11 | 5.20 | UUCGUGUCUUAACGUAUCUGACA | | siRNA23 | ShortStack |
tcc-b1.1r1-1626 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12776566-12776872 | . | 6 | 2.83 | UGAUAAUGUGUGAGACGGCACGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1627 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12777624-12777863 | + | 14 | 6.61 | UUAGUGUGUCACGACUGUUGAUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1628 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12779823-12779927 | - | 5 | 2.36 | GAUGCAUGAUCCGUCGUAACUGAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1629 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12786792-12786874 | + | 5 | 2.36 | AGGGAUAUAACUCAA | | OtherRNA | ShortStack |
tcc-b1.1r1-1630 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12849424-12849533 | . | 5 | 2.36 | UCAUACUGGUGGGAUCCGGGAGU | | siRNA23 | ShortStack |
tcc-b1.1r1-1631 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12874161-12874269 | - | 25 | 11.81 | GGUAGCGACUGUUUAUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1632 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12913713-12913851 | + | 5 | 2.36 | AACGUGUCACAGCUGUUACUGGCGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1633 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12921083-12921262 | . | 6 | 2.83 | CGGUAAGGACAAUUGUAACGU | | siRNA23 | ShortStack |
tcc-b1.1r1-1634 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12923571-12923632 | . | 8 | 3.78 | AACGUCUGUGUGAGUCAUUUCUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1635 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12984028-12984133 | - | 14 | 6.61 | GUCAAGAUGGCCGAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1636 | Theobroma cacao (Cacao) 1.1 | scaffold_1:12999667-12999854 | . | 13 | 6.14 | UCCGAGGAACUUGUAGAGACGAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1637 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13000078-13000680 | . | 91 | 42.98 | UCUGCUUUGUGGAUCUCAGGAGGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1638 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13002035-13002197 | - | 5 | 2.36 | ACUUAGGAAAAAUCUGGAGUUACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1639 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13006409-13006537 | . | 5 | 2.36 | UCGAGAUGAAUGAAACCUGCGGAG | | siRNA24 | ShortStack |
tcc-b1.1r1-1640 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13011313-13011556 | . | 8 | 3.78 | AAUUUACGGGCUAGUGAUCUUUCCCAAAGUUUUGGGACAUAUAG | | OtherRNA | ShortStack |
tcc-b1.1r1-1641 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13012939-13013061 | . | 18 | 8.50 | UCUGUCGACGAAUCUAAAAUCAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1642 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13013377-13013611 | . | 30 | 14.17 | UUGUAUUUCUUUGCUUAUGGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1643 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13043851-13044063 | + | 6 | 2.83 | AAGCACUUCUGUUGAAAACGUAUC | | siRNA21 | ShortStack |
tcc-b1.1r1-1644 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13062882-13062899 | + | 5 | 2.36 | AAGCUCGUUUGAUUCC | | OtherRNA | ShortStack |
tcc-b1.1r1-1645 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13068595-13068817 | . | 10 | 4.72 | AUAUUCUGGUGUCCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1646 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13099797-13100097 | . | 10 | 4.72 | AUGUGCCCGAAGGUCUUCAGAAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1647 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13106188-13106313 | + | 5 | 2.36 | ACCCUCAAGAAUUCUAAUCACUUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1648 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13114413-13114625 | - | 5 | 2.36 | GGAAUCUAACUGUAGAGGAGUAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1649 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13115210-13115254 | + | 11 | 5.20 | CUCUCAACCGAUCUAGUGAAAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1650 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13130369-13130671 | . | 18 | 8.50 | AAAGACGAUCGAACAAAACAUAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1651 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13152947-13153099 | + | 18 | 8.50 | AUUACGUGAUAAUAGAAUGAAGUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1652 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13153541-13154008 | . | 100 | 47.23 | AACCGUGGGAUCUGGUCAGGAAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1653 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13154602-13154617 | + | 9 | 4.25 | UAAAAAGCUCGUAGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1654 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13172287-13172301 | + | 5 | 2.36 | CGACGCCAGGAUAAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1655 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13213973-13214971 | . | 119 | 56.21 | GACUGCUAGAGAGAUAUUCGA | | siRNA21 | ShortStack |
tcc-b1.1r1-1656 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13215310-13215538 | . | 7 | 3.31 | UUUCACCAGGACUGAAUGGGA | | siRNA21 | ShortStack |
tcc-b1.1r1-1657 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13216525-13217343 | - | 235 | 111.00 | UGUGCUCAUGGGAUUU | | OtherRNA | ShortStack |
tcc-b1.1r1-1658 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13217732-13217939 | - | 22 | 10.39 | CCAUGCGCAGAACUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1659 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13218462-13218566 | . | 11 | 5.20 | AAUACCAUGUAGCAAUGCUGACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1660 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13220690-13220802 | . | 6 | 2.83 | UUUGUAACAGACUACUGUAAUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1661 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13221193-13221425 | . | 9 | 4.25 | CAGCUGCAAUGUUAUCUUCUCUGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1662 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13239240-13239371 | . | 7 | 3.31 | AUCGAGGUAGAUCUAGAUUAGUAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1663 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13256964-13257275 | + | 7 | 3.31 | AUAUUGAAACCUUAGUCUCGGAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1664 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13272721-13272751 | - | 5 | 2.36 | AUAUACUCCGGUCUCACACAUCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1665 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13275980-13276202 | . | 8 | 3.78 | ACUAAUAUAUGGUCUGCUGAAUGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1666 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13302145-13302408 | . | 11 | 5.20 | AGAUCGGCGUCAAGGAUCUGCUGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1667 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13303502-13303679 | - | 5 | 2.36 | AAUUGGAUGUCACGAAAAGAAC | | OtherRNA | ShortStack |
tcc-b1.1r1-1668 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13321058-13321128 | + | 5 | 2.36 | CGAGAGUAGACUGCUAAAUACAUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1669 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13351862-13352094 | + | 21 | 9.92 | AAGACUCCGUCGAUUAGAAUCGAG | | siRNA24 | ShortStack |
tcc-b1.1r1-1670 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13397225-13397402 | + | 20 | 9.45 | AAUGGCUGGUGGAGCUCAGACUGG | | siRNA24 | ShortStack |
tcc-b1.1r1-1671 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13397523-13397547 | + | 9 | 4.25 | ACUACUCCUCAAACGUGGUCUGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1672 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13398039-13398164 | . | 17 | 8.03 | AUAAUUUUUGCAUCGGUCAGAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1673 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13536280-13536345 | - | 12 | 5.67 | UAAACGAUCGAAAACUGCGAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1674 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13539791-13539932 | . | 5 | 2.36 | ACCACCGACUCAUCAGCUCAUGUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1675 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13563670-13563867 | - | 7 | 3.31 | AUUGAGAAAUUUAUGUAAGCUGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1676 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13596358-13596485 | . | 5 | 2.36 | AUGAUAAGUAAGCUCAAAGAAAUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1677 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13604146-13604256 | . | 5 | 2.36 | AUCGGAGUAUAAUAAGAUUAUCA | | OtherRNA | ShortStack |
tcc-b1.1r1-1678 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13641692-13641891 | . | 11 | 5.20 | ACAGGAGUUGAUGUGAAUCAUGAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1679 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13642382-13642464 | . | 25 | 11.81 | UUCGUAUCUAAUCGUGUCUGACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1680 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13649621-13649728 | + | 14 | 6.61 | UUUGUAGAUCGACGACGAUAUGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1681 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13658459-13658509 | . | 5 | 2.36 | AUUCAGUUAGAGGUAGAUUGAAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1682 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13661253-13661418 | . | 5 | 2.36 | ACUUCCAAUAAAAAAUGACUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1683 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13661782-13661902 | . | 6 | 2.83 | GUUCAAUGUAGUCCCUAUGACGU | | siRNA23 | ShortStack |
tcc-b1.1r1-1684 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13670751-13670789 | - | 9 | 4.25 | AUGACUGUGUGAUAUUUUUCAAUC | | siRNA23 | ShortStack |
tcc-b1.1r1-1685 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13671535-13671689 | . | 7 | 3.31 | AUUUGUCAUUCUAUAUCGCGUGGC | | OtherRNA | ShortStack |
tcc-b1.1r1-1686 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13675669-13675724 | . | 8 | 3.78 | GCGUGUAGGACAUGCGCAUGACGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1687 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13675816-13675966 | + | 5 | 2.36 | UAGCAUGACGUGUAACAAUUUUAUUUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1688 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13718583-13718747 | . | 5 | 2.36 | AAACAACUACGUCGAUAUGGGAUU | | siRNA23 | ShortStack |
tcc-b1.1r1-1689 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13744926-13745071 | - | 23 | 10.86 | AUCGGGCUUGUGACAACCGUCGCG | | siRNA24 | ShortStack |
tcc-b1.1r1-1690 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13767723-13767863 | + | 9 | 4.25 | UGGAGAGAGAGGACACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1691 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13768379-13768821 | + | 11 | 5.20 | CUGACCCUGUUAUCAAAGGAUUCAUGCCC | | OtherRNA | ShortStack |
tcc-b1.1r1-1692 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13768914-13769099 | + | 6 | 2.83 | AAAUGGGGUUGCGGGAUUGGACGG | | OtherRNA | ShortStack |
tcc-b1.1r1-1693 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13781239-13781510 | - | 9 | 4.25 | GACGUGUCACAUGUUUCUGUACAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1694 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13785731-13786001 | - | 20 | 9.45 | CAGAUCUGAUCGUGGAGUGUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1695 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13791830-13791991 | . | 10 | 4.72 | GAUGGUGCUUAACAGAGAGUUGAC | | siRNA24 | ShortStack |
tcc-b1.1r1-1696 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13792366-13792586 | . | 7 | 3.31 | GCAUUCGUGACUCACCACCU | | siRNA20 | ShortStack |
tcc-b1.1r1-1697 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13806772-13806873 | . | 5 | 2.36 | AUGGCUUGAGCAUGUGACACGU | | siRNA22 | ShortStack |
tcc-b1.1r1-1698 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13822192-13822363 | . | 7 | 3.31 | AAAAUGAUUUCGAUUCUCUCUAUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1699 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13855975-13856116 | - | 7 | 3.31 | UGUCGUGUCGUGUCGUGUUAC | | siRNA21 | ShortStack |
tcc-b1.1r1-1700 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13876626-13876812 | . | 13 | 6.14 | ACUUCGUGGACGUAGGCAAGAGGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1701 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13878750-13878887 | . | 6 | 2.83 | UCGGCCUCUUGCCUACGUCCACGA | | siRNA24 | ShortStack |
tcc-b1.1r1-1702 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13880822-13881045 | . | 14 | 6.61 | CUACAUAGUAAAUUUACGAAAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1703 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13885012-13885227 | + | 99 | 46.76 | CAACGGCGGACCCGUAGGUGGU | | siRNA22 | ShortStack |
tcc-b1.1r1-1704 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13885533-13885647 | + | 79 | 37.31 | UUACGUGGGUCCUUUCGAGUUC | | siRNA22 | ShortStack |
tcc-b1.1r1-1705 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13895607-13895795 | + | 5 | 2.36 | UUACGUGACUUGUUUAUAGAUU | | siRNA22 | ShortStack |
tcc-b1.1r1-1706 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13915836-13915991 | . | 17 | 8.03 | CGUGUUUAAUCGUGUUAUCGUGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1707 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13916396-13916591 | + | 5 | 2.36 | AUUUACGACACGUUAACAUGAAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1708 | Theobroma cacao (Cacao) 1.1 | scaffold_1:13947919-13948029 | + | 5 | 2.36 | GAUAAUCUAUCUUUGGAACUUAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1709 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14014866-14014880 | + | 16 | 7.56 | CCACUUCUGACGCCA | miR2478 | OtherRNA | ShortStack |
tcc-b1.1r1-1710 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14040819-14040867 | - | 5 | 2.36 | AACAUCUGAAAUCUAUAUAAACUC | | siRNA24 | ShortStack |
tcc-b1.1r1-1711 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14040950-14041201 | + | 20 | 9.45 | AACCGAACUAAUCGAACUCAUAUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1712 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14066709-14066846 | . | 7 | 3.31 | AUAUACUAACCGAACUAUUAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1713 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14095472-14095619 | . | 6 | 2.83 | CAAAUGUGACCCGAUCUUUAAACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1714 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14138335-14138570 | . | 21 | 9.92 | ACUCCGUGGACGUAGGUAAGAAGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1715 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14148303-14148548 | . | 5 | 2.36 | CUUCCUAAUCUAUUGAACAAACAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1716 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14196599-14196614 | - | 6 | 2.83 | UAGAGGGACUAUGGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1717 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14199605-14199632 | - | 5 | 2.36 | AUUCGAUGACCAGUAGACAGAGUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1718 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14244919-14244971 | - | 5 | 2.36 | GCUAAUCGAUCUGAACUAACCGAA | | siRNA24 | ShortStack |
tcc-b1.1r1-1719 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14248472-14248539 | . | 6 | 2.83 | AACCGAACUAACCGAACUCAUGUA | | siRNA24 | ShortStack |
tcc-b1.1r1-1720 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14258631-14258746 | - | 8 | 3.78 | UUCCAUCGACUGUCUUAAAUUGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1721 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14263324-14263361 | . | 5 | 2.36 | ACGACUAAGAAAGACAUGAGAUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1722 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14270262-14270468 | . | 8 | 3.78 | AUCGAGAUAGACUCAGACCAGUGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1723 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14367574-14367700 | . | 8 | 3.78 | AUCUAGAUAGUAGAAGAUU | | siRNA22 | ShortStack |
tcc-b1.1r1-1724 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14368333-14368477 | + | 27 | 12.75 | GUUGUGCCCGUGGACGUAGGUCAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1725 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14412841-14412858 | + | 24 | 11.34 | UACCUGGUUGAUCCCGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1726 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14476227-14476358 | - | 8 | 3.78 | UCUGUGAGAAACAAACU | | OtherRNA | ShortStack |
tcc-b1.1r1-1727 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14476458-14477029 | - | 61 | 28.81 | UUGGGAUUCGAGAAAUAUC | | OtherRNA | ShortStack |
tcc-b1.1r1-1728 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14477334-14477593 | - | 11 | 5.20 | GUCUCAUUCUUCCCAUAAUCCCGCCAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1729 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14478682-14478852 | - | 11 | 5.20 | AUAGAAUAGUUAUUAUGUGAGAAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1730 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14491038-14491054 | + | 10 | 4.72 | AGUGGGCCAUUUUUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1731 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14550760-14550967 | + | 11 | 5.20 | AUUCUGUGGGAAUAGAAUAAAGUG | | OtherRNA | ShortStack |
tcc-b1.1r1-1732 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14551485-14551576 | . | 6 | 2.83 | UCUAUUCUGUGACUCAUAU | | OtherRNA | ShortStack |
tcc-b1.1r1-1733 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14604885-14604971 | . | 5 | 2.36 | AGACAGAGACAGACAGAGACA | | OtherRNA | ShortStack |
tcc-b1.1r1-1734 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14606342-14606530 | - | 16 | 7.56 | AUCUAUGUGGCACUGACGUGAUAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1735 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14616144-14616239 | - | 5 | 2.36 | UUGUCUGAUAGUCUGCUUCAUAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1736 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14662340-14662468 | . | 6 | 2.83 | AAGAAACCGAUAUGUAAGCCUUGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1737 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14803714-14803835 | + | 6 | 2.83 | ACGACCCGGAACCUGCCUCAGGCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1738 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14873712-14873802 | . | 10 | 4.72 | UAUAGACAUGUGUGAUUAUUGACU | | siRNA24 | ShortStack |
tcc-b1.1r1-1739 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14881389-14881425 | . | 9 | 4.25 | ACAAUCCUCUCUGAUCUCUCAAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1740 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14899618-14899692 | . | 5 | 2.36 | UCACACUAUGGGAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1741 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14922503-14922676 | . | 6 | 2.83 | UUUUUAGGUCUAGUGAAGCU | | siRNA21 | ShortStack |
tcc-b1.1r1-1742 | Theobroma cacao (Cacao) 1.1 | scaffold_1:14924473-14924609 | . | 11 | 5.20 | AAAAUGUAGAGAUGACACCAAGGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1743 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15081304-15081444 | . | 12 | 5.67 | AUGUUAGAUCCGAAUGCUCAGUU | | siRNA23 | ShortStack |
tcc-b1.1r1-1744 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15089949-15090111 | + | 5 | 2.36 | UUGGAGGACAUCAAAAGU | | OtherRNA | ShortStack |
tcc-b1.1r1-1745 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15119882-15119970 | - | 7 | 3.31 | GAGACUUUUCCUUCACUUUG | | siRNA24 | ShortStack |
tcc-b1.1r1-1746 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15120088-15120515 | + | 22 | 10.39 | AUUUAAUGAGACCUGUUAUCGAGU | | siRNA24 | ShortStack |
tcc-b1.1r1-1747 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15131824-15131927 | . | 5 | 2.36 | GCUUUAAAAUGCUCAUGGACGUCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1748 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15132405-15132555 | . | 6 | 2.83 | AAGCGUGACAAAAGAAACUCGGUU | | siRNA24 | ShortStack |
tcc-b1.1r1-1749 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15137534-15137799 | . | 6 | 2.83 | ACACUGAUUGCAUGCAGACUUGGC | | siRNA24 | ShortStack |
tcc-b1.1r1-1750 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15140767-15140902 | . | 7 | 3.31 | AACAGUUGGCUGCACAAUUUCGAU | | siRNA24 | ShortStack |
tcc-b1.1r1-1751 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15141680-15141739 | . | 6 | 2.83 | AUGGGUUUUUGACGUGUCACGGCU | | siRNA24 | ShortStack |
tcc-b1.1r1-1752 | Theobroma cacao (Cacao) 1.1 | scaffold_1:15152065-15152280 | + | 6 | 2.83 | GAGAGGAUUUGAAAUUUUGUUCGU | | siRNA21 | ShortStack |