Data from Lunardon et al. (2020)
Data from Lunardon et al. (2020)Version v8 of Lactuca sativa cv. Salinas from Phytozome
Click links below to show sub-sets of annotations
| ShortStack | Reyes-Chin-Wo_et_al_2017 | |
| MIRNA | 55 | 61 |
| nearMIRNA | 43 | 8 |
| siRNA20 | 10 | 6 |
| siRNA21 | 766 | 5 |
| siRNA22 | 393 | 1 |
| siRNA23 | 135 | 0 |
| siRNA24 | 9,298 | 1 |
| OtherRNA | 2,990 | 1 |
| NotExpressed | 0 | 1 |
| accession | aligned reads | unaligned reads | source db | is refset? Alignments that are reference sets (value of 1) are mergers of other component libraries used to compile master small RNA annotations for a species. | tissue | ecotype / cultivar | genotype | replicate id Alignments that are biological replicates have the same replicate ids | refset id If set, the alignment is part of the indicated reference set | description |
|---|---|---|---|---|---|---|---|---|---|---|
| lettuce_all_reference_set | 331,626,361 | 56,787,318 | none | 1 | leaf | mixed | wt | refset1 | 1 | merge of 10 libraries - reference set 1 |