Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
csa-b2r1-42 | Cucumis sativus (Cucumber) 2 | Chr1:241176-241405 | - | 162,076 | 249.00 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | ShortStack |
csa-MIR171b-1 | Cucumis sativus (Cucumber) 2 | Chr1:241216-241312 | - | 162,042 | 248.94 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-1 | Cucumis sativus (Cucumber) 2 | Chr1:241216-241312 | - | 162,042 | 248.94 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-b2r1-429 | Cucumis sativus (Cucumber) 2 | Chr1:1445662-1445740 | + | 363 | 0.56 | UCUAUCUAUACUAAAUCCAUU | | MIRNA | ShortStack |
csa-b2r1-637 | Cucumis sativus (Cucumber) 2 | Chr1:2135508-2135763 | - | 106,658 | 163.86 | UCGAUAAACCUCUGCAUCCAG | miR162 | MIRNA | ShortStack |
csa-MIR162 | Cucumis sativus (Cucumber) 2 | Chr1:2135592-2135705 | - | 106,637 | 163.83 | UCGAUAAACCUCUGCAUCCAG | miR162 | MIRNA | Ling_et_al_2017 |
csa-b2r1-756 | Cucumis sativus (Cucumber) 2 | Chr1:2522380-2522660 | + | 682,439 | 1,048.42 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | ShortStack |
csa-MIR157-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522422-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156b-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522422-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522422-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156e-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522422-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522423-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522423-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522423-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR159a | Cucumis sativus (Cucumber) 2 | Chr1:4427157-4427374 | + | 2,151,646 | 3,305.55 | UUUGGAUUGAAGGGAGCUCUA | miR159 | MIRNA | Ling_et_al_2017 |
csa-MIR159b-1 | Cucumis sativus (Cucumber) 2 | Chr1:4427158-4427373 | + | 2,151,646 | 3,305.55 | UUUGGAUUGAAGGGAGCUCUA | miR159 | MIRNA | Ling_et_al_2017 |
csa-MIR159c | Cucumis sativus (Cucumber) 2 | Chr1:4427158-4427373 | + | 2,151,646 | 3,305.55 | UUUGGAUUGAAGGGAGCUCUA | miR159 | MIRNA | Ling_et_al_2017 |
csa-b2r1-1432 | Cucumis sativus (Cucumber) 2 | Chr1:4895757-4895944 | - | 32,791 | 50.38 | CAGCCAAGGAUGACUUGCCGG | miR169 | MIRNA | ShortStack |
csa-MIR169b-1 | Cucumis sativus (Cucumber) 2 | Chr1:4895775-4895877 | - | 32,784 | 50.37 | CAGCCAAGGAUGACUUGCCGG | miR169 | MIRNA | Ling_et_al_2017 |
csa-b2r1-2228 | Cucumis sativus (Cucumber) 2 | Chr1:7211674-7211808 | + | 23,741 | 36.47 | UCAUUGAGUGCAGCGUUGAUG | miR397 | MIRNA | ShortStack |
csa-MIR397 | Cucumis sativus (Cucumber) 2 | Chr1:7211713-7211804 | + | 23,739 | 36.47 | UCAUUGAGUGCAGCGUUGAUG | miR397 | MIRNA | Ling_et_al_2017 |
csa-MIR396c-1 | Cucumis sativus (Cucumber) 2 | Chr1:12055083-12055242 | + | 8,784,042 | 13,494.81 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-3 | Cucumis sativus (Cucumber) 2 | Chr1:12055084-12055243 | + | 8,784,041 | 13,494.81 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-1 | Cucumis sativus (Cucumber) 2 | Chr1:12055086-12055241 | + | 8,784,041 | 13,494.81 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-1 | Cucumis sativus (Cucumber) 2 | Chr1:12055088-12055239 | + | 8,784,041 | 13,494.81 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-2 | Cucumis sativus (Cucumber) 2 | Chr1:12055088-12055238 | + | 8,784,041 | 13,494.81 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-b2r1-4117 | Cucumis sativus (Cucumber) 2 | Chr1:12060992-12061218 | - | 85,254 | 130.98 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | ShortStack |
csa-MIR396b-1 | Cucumis sativus (Cucumber) 2 | Chr1:12061006-12061154 | - | 85,169 | 130.84 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-3 | Cucumis sativus (Cucumber) 2 | Chr1:12061032-12061152 | - | 85,160 | 130.83 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-3 | Cucumis sativus (Cucumber) 2 | Chr1:12061034-12061150 | - | 85,160 | 130.83 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-2 | Cucumis sativus (Cucumber) 2 | Chr1:12065089-12065213 | - | 14,823 | 22.77 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-4 | Cucumis sativus (Cucumber) 2 | Chr1:12065090-12065229 | - | 14,823 | 22.77 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-2 | Cucumis sativus (Cucumber) 2 | Chr1:12065092-12065211 | - | 14,823 | 22.77 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-4 | Cucumis sativus (Cucumber) 2 | Chr1:12065092-12065211 | - | 14,823 | 22.77 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-4 | Cucumis sativus (Cucumber) 2 | Chr1:12065094-12065209 | - | 14,822 | 22.77 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-b2r1-4119 | Cucumis sativus (Cucumber) 2 | Chr1:12065097-12065280 | - | 14,832 | 22.79 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | ShortStack |
csa-b2r1-4141 | Cucumis sativus (Cucumber) 2 | Chr1:12101510-12101701 | - | 20,984 | 32.24 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | ShortStack |
csa-MIR171c-1 | Cucumis sativus (Cucumber) 2 | Chr1:12101563-12101675 | - | 20,979 | 32.23 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171e-1 | Cucumis sativus (Cucumber) 2 | Chr1:12101563-12101675 | - | 20,979 | 32.23 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-2 | Cucumis sativus (Cucumber) 2 | Chr1:12101566-12101673 | - | 20,979 | 32.23 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-2 | Cucumis sativus (Cucumber) 2 | Chr1:12101566-12101673 | - | 20,979 | 32.23 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR169e-3 | Cucumis sativus (Cucumber) 2 | Chr1:15616415-15616534 | + | 3,861 | 5.93 | UGAGCCAAGGAUGACUUGCCU | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR169e-2 | Cucumis sativus (Cucumber) 2 | Chr1:15616416-15616544 | + | 3,868 | 5.94 | UGAGCCAAGGAUGACUUGCCU | miR169 | MIRNA | Ling_et_al_2017 |
csa-b2r1-5875 | Cucumis sativus (Cucumber) 2 | Chr1:16315821-16315941 | - | 433 | 0.67 | GUAGAGACGUUAGAGUUGACU | | MIRNA | ShortStack |
csa-MIR399c-1 | Cucumis sativus (Cucumber) 2 | Chr1:16879724-16879902 | + | 737 | 1.13 | UGCCAAAGGAGAUUUGCCCGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-b2r1-7010 | Cucumis sativus (Cucumber) 2 | Chr1:18955957-18956118 | + | 5,737 | 8.81 | CGCUAUCCAUCCUGAGUUUCA | miR390 | MIRNA | ShortStack |
csa-MIR390-2 | Cucumis sativus (Cucumber) 2 | Chr1:18956000-18956118 | + | 5,734 | 8.81 | CGCUAUCCAUCCUGAGUUUCA | miR390 | MIRNA | Ling_et_al_2017 |
csa-MIR390-1 | Cucumis sativus (Cucumber) 2 | Chr1:18956001-18956119 | + | 5,734 | 8.81 | CGCUAUCCAUCCUGAGUUUCA | miR390 | MIRNA | Ling_et_al_2017 |
csa-b2r1-7757 | Cucumis sativus (Cucumber) 2 | Chr1:20943575-20943782 | - | 24,051 | 36.95 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | ShortStack |
csa-MIR164a-1 | Cucumis sativus (Cucumber) 2 | Chr1:20943619-20943728 | - | 24,045 | 36.94 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-2 | Cucumis sativus (Cucumber) 2 | Chr1:22344995-22345101 | + | 208 | 0.32 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-2 | Cucumis sativus (Cucumber) 2 | Chr1:22344996-22345100 | + | 208 | 0.32 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-2 | Cucumis sativus (Cucumber) 2 | Chr1:22344996-22345100 | + | 208 | 0.32 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR398b-1 | Cucumis sativus (Cucumber) 2 | Chr1:24920789-24920879 | + | 525,458 | 807.26 | UGUGUUCUCAGGUCGCCCCUG | miR398 | MIRNA | Ling_et_al_2017 |
csa-MIR4 | Cucumis sativus (Cucumber) 2 | Chr1:24920790-24920880 | + | 525,446 | 807.24 | UGUGUUCUCAGGUCGCCCCUG | miR398 | MIRNA | Ling_et_al_2017 |
csa-MIR167a-1 | Cucumis sativus (Cucumber) 2 | Chr1:28512214-28512456 | - | 338,605 | 520.20 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-1 | Cucumis sativus (Cucumber) 2 | Chr1:28512214-28512456 | - | 338,605 | 520.20 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-1 | Cucumis sativus (Cucumber) 2 | Chr1:28512214-28512456 | - | 338,605 | 520.20 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR171c-2 | Cucumis sativus (Cucumber) 2 | Chr2:1330897-1331012 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171e-2 | Cucumis sativus (Cucumber) 2 | Chr2:1330897-1331012 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR12 | Cucumis sativus (Cucumber) 2 | Chr2:1330903-1331011 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-3 | Cucumis sativus (Cucumber) 2 | Chr2:1330904-1331009 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-3 | Cucumis sativus (Cucumber) 2 | Chr2:1330904-1331009 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-b2r1-11312 | Cucumis sativus (Cucumber) 2 | Chr2:1330907-1331006 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | ShortStack |
csa-b2r1-11330 | Cucumis sativus (Cucumber) 2 | Chr2:1364728-1365014 | + | 987,596 | 1,517.23 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | ShortStack |
csa-MIR7 | Cucumis sativus (Cucumber) 2 | Chr2:1364800-1364959 | + | 987,585 | 1,517.21 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-5 | Cucumis sativus (Cucumber) 2 | Chr2:1364800-1364958 | + | 987,585 | 1,517.21 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-5 | Cucumis sativus (Cucumber) 2 | Chr2:1364802-1364956 | + | 987,584 | 1,517.21 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-6 | Cucumis sativus (Cucumber) 2 | Chr2:1364802-1364956 | + | 987,584 | 1,517.21 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-6 | Cucumis sativus (Cucumber) 2 | Chr2:1364803-1364954 | + | 987,583 | 1,517.21 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396c-2 | Cucumis sativus (Cucumber) 2 | Chr2:1372152-1372317 | - | 2,906,337 | 4,464.97 | UUCCACGGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-6 | Cucumis sativus (Cucumber) 2 | Chr2:1372152-1372317 | - | 2,906,337 | 4,464.97 | UUCCACGGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-7 | Cucumis sativus (Cucumber) 2 | Chr2:1372154-1372315 | - | 2,906,328 | 4,464.96 | UUCCACGGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-7 | Cucumis sativus (Cucumber) 2 | Chr2:1372155-1372313 | - | 2,906,328 | 4,464.96 | UUCCACGGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-5 | Cucumis sativus (Cucumber) 2 | Chr2:1372156-1372314 | - | 2,906,328 | 4,464.96 | UUCCACGGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR156b-2 | Cucumis sativus (Cucumber) 2 | Chr2:1701690-1701828 | + | 30,762 | 47.26 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-3 | Cucumis sativus (Cucumber) 2 | Chr2:1701690-1701828 | + | 30,762 | 47.26 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-2 | Cucumis sativus (Cucumber) 2 | Chr2:1701691-1701827 | + | 30,762 | 47.26 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-3 | Cucumis sativus (Cucumber) 2 | Chr2:1701691-1701827 | + | 30,762 | 47.26 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-3 | Cucumis sativus (Cucumber) 2 | Chr2:1701691-1701827 | + | 30,762 | 47.26 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-b2r1-12116 | Cucumis sativus (Cucumber) 2 | Chr2:3548764-3548931 | - | 843 | 1.30 | ACAAGUUAUGACUUAUGAGUC | | MIRNA | ShortStack |
csa-MIR20 | Cucumis sativus (Cucumber) 2 | Chr2:4667254-4667459 | - | 740 | 1.14 | UCGACCAGGACAAAGACUGAGU | | MIRNA | Ling_et_al_2017 |
csa-b2r1-12648 | Cucumis sativus (Cucumber) 2 | Chr2:4754726-4755011 | - | 139,911 | 214.94 | AAGCCAAGGAUGAAUUGCCGG | miR169 | MIRNA | ShortStack |
csa-MIR169a | Cucumis sativus (Cucumber) 2 | Chr2:4754807-4754944 | - | 139,884 | 214.90 | AAGCCAAGGAUGAAUUGCCGG | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR169b-2 | Cucumis sativus (Cucumber) 2 | Chr2:4754807-4754944 | - | 139,884 | 214.90 | AAGCCAAGGAUGAAUUGCCGG | miR169 | MIRNA | Ling_et_al_2017 |
csa-b2r1-13888 | Cucumis sativus (Cucumber) 2 | Chr2:8246005-8246146 | - | 27,994 | 43.01 | UUAGAUGACCAUCAACGAACG | miR827 | MIRNA | ShortStack |
csa-MIR827 | Cucumis sativus (Cucumber) 2 | Chr2:8246016-8246110 | - | 27,978 | 42.98 | UUAGAUGACCAUCAACGAACG | miR827 | MIRNA | Ling_et_al_2017 |
csa-b2r1-14971 | Cucumis sativus (Cucumber) 2 | Chr2:10691040-10691288 | - | 81,988 | 125.96 | UCAAGCUGCCAGCAUGAUCUAA | miR167 | MIRNA | ShortStack |
csa-MIR167a-2 | Cucumis sativus (Cucumber) 2 | Chr2:10691119-10691234 | - | 81,967 | 125.93 | UCAAGCUGCCAGCAUGAUCUAA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-2 | Cucumis sativus (Cucumber) 2 | Chr2:10691119-10691234 | - | 81,967 | 125.93 | UCAAGCUGCCAGCAUGAUCUAA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-2 | Cucumis sativus (Cucumber) 2 | Chr2:10691119-10691234 | - | 81,967 | 125.93 | UCAAGCUGCCAGCAUGAUCUAA | miR167 | MIRNA | Ling_et_al_2017 |
csa-b2r1-15133 | Cucumis sativus (Cucumber) 2 | Chr2:11090145-11090288 | - | 122,579 | 188.32 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | ShortStack |
csa-MIR167a-3 | Cucumis sativus (Cucumber) 2 | Chr2:11090154-11090254 | - | 122,567 | 188.30 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-3 | Cucumis sativus (Cucumber) 2 | Chr2:11090154-11090254 | - | 122,567 | 188.30 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-3 | Cucumis sativus (Cucumber) 2 | Chr2:11090154-11090254 | - | 122,567 | 188.30 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-b2r1-16301 | Cucumis sativus (Cucumber) 2 | Chr2:13796300-13796469 | - | 18,126 | 27.85 | UUCCAUCUCUUGCACACUGGA | miR2950 | MIRNA | ShortStack |
csa-MIR2950 | Cucumis sativus (Cucumber) 2 | Chr2:13796310-13796397 | - | 18,120 | 27.84 | UUCCAUCUCUUGCACACUGGA | miR2950 | MIRNA | Ling_et_al_2017 |
csa-b2r1-16978 | Cucumis sativus (Cucumber) 2 | Chr2:15576550-15576730 | - | 88,133 | 135.40 | UGAUUGAGCCGCGCCAAUAUC | miR171 | MIRNA | ShortStack |
csa-MIR171b-5 | Cucumis sativus (Cucumber) 2 | Chr2:15576606-15576745 | - | 88,123 | 135.38 | UGAUUGAGCCGCGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-5 | Cucumis sativus (Cucumber) 2 | Chr2:15576606-15576745 | - | 88,123 | 135.38 | UGAUUGAGCCGCGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-b2r1-16990 | Cucumis sativus (Cucumber) 2 | Chr2:15605287-15605581 | + | 61,580 | 94.61 | UUGGCAUUCUGUCCACCUCC | miR394 | MIRNA | ShortStack |
csa-MIR394-1 | Cucumis sativus (Cucumber) 2 | Chr2:15605355-15605498 | + | 61,571 | 94.59 | UUGGCAUUCUGUCCACCUCC | miR394 | MIRNA | Ling_et_al_2017 |
csa-MIR35 | Cucumis sativus (Cucumber) 2 | Chr2:18796326-18796450 | + | 1,429 | 2.20 | CUAUUGUCUCCAUUAUUUGUGAUA | | MIRNA | Ling_et_al_2017 |
csa-b2r1-17781 | Cucumis sativus (Cucumber) 2 | Chr2:18796328-18796542 | + | 1,441 | 2.21 | CUAUUGUCUCCAUUAUUUGUGAUA | | MIRNA | ShortStack |
csa-b2r1-18099 | Cucumis sativus (Cucumber) 2 | Chr2:19844334-19844506 | + | 126,016 | 193.60 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
csa-MIR157-2 | Cucumis sativus (Cucumber) 2 | Chr2:19844373-19844486 | + | 126,000 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-4 | Cucumis sativus (Cucumber) 2 | Chr2:19844373-19844486 | + | 126,000 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156e-2 | Cucumis sativus (Cucumber) 2 | Chr2:19844373-19844486 | + | 126,000 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-3 | Cucumis sativus (Cucumber) 2 | Chr2:19844374-19844486 | + | 125,999 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-4 | Cucumis sativus (Cucumber) 2 | Chr2:19844374-19844486 | + | 125,999 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-4 | Cucumis sativus (Cucumber) 2 | Chr2:19844374-19844486 | + | 125,999 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR15 | Cucumis sativus (Cucumber) 2 | Chr2:21647093-21647262 | - | 21,154 | 32.50 | UUGAGCCGCGUCAAUAUCUCU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171a | Cucumis sativus (Cucumber) 2 | Chr2:21647105-21647253 | - | 21,153 | 32.50 | UUGAGCCGCGUCAAUAUCUCU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171e-4 | Cucumis sativus (Cucumber) 2 | Chr2:21647105-21647253 | - | 21,153 | 32.50 | UUGAGCCGCGUCAAUAUCUCU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-6 | Cucumis sativus (Cucumber) 2 | Chr2:21647108-21647250 | - | 21,151 | 32.49 | UUGAGCCGCGUCAAUAUCUCU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-6 | Cucumis sativus (Cucumber) 2 | Chr2:21647108-21647250 | - | 21,151 | 32.49 | UUGAGCCGCGUCAAUAUCUCU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171c-3 | Cucumis sativus (Cucumber) 2 | Chr2:21671416-21671523 | + | 14,548 | 22.35 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171e-3 | Cucumis sativus (Cucumber) 2 | Chr2:21671416-21671523 | + | 14,548 | 22.35 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR30 | Cucumis sativus (Cucumber) 2 | Chr2:21671418-21671522 | + | 14,547 | 22.35 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-4 | Cucumis sativus (Cucumber) 2 | Chr2:21671419-21671520 | + | 14,547 | 22.35 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-4 | Cucumis sativus (Cucumber) 2 | Chr2:21671419-21671520 | + | 14,547 | 22.35 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | Ling_et_al_2017 |
csa-b2r1-18694 | Cucumis sativus (Cucumber) 2 | Chr2:21671425-21671572 | + | 14,559 | 22.37 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | ShortStack |
csa-MIR166-2 | Cucumis sativus (Cucumber) 2 | Chr2:22471791-22472067 | - | 48,373 | 74.32 | UCUCGGACCAGGCUUCAUUCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-b2r1-20467 | Cucumis sativus (Cucumber) 2 | Chr3:2872554-2872664 | - | 258 | 0.40 | UACCAAUAUUGGUGAACAUGC | | MIRNA | ShortStack |
csa-MIR166-4 | Cucumis sativus (Cucumber) 2 | Chr3:6590411-6590517 | - | 22,878 | 35.15 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-b2r1-22626 | Cucumis sativus (Cucumber) 2 | Chr3:9416358-9416598 | + | 9,701,579 | 14,904.41 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
csa-MIR166-3 | Cucumis sativus (Cucumber) 2 | Chr3:9416437-9416547 | + | 9,701,533 | 14,904.34 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-MIR45 | Cucumis sativus (Cucumber) 2 | Chr3:10177309-10177597 | - | 870 | 1.34 | UCGGUUGCCUCUAUGUUCUCU | | MIRNA | Ling_et_al_2017 |
csa-MIR393-1 | Cucumis sativus (Cucumber) 2 | Chr3:12618389-12618507 | - | 151,053 | 232.06 | UCCAAAGGGAUCGCAUUGAUC | miR393 | MIRNA | Ling_et_al_2017 |
csa-b2r1-27695 | Cucumis sativus (Cucumber) 2 | Chr3:22789902-22790038 | - | 61,074 | 93.83 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | ShortStack |
csa-MIR157-6 | Cucumis sativus (Cucumber) 2 | Chr3:22789940-22790046 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156b-6 | Cucumis sativus (Cucumber) 2 | Chr3:22789940-22790046 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-8 | Cucumis sativus (Cucumber) 2 | Chr3:22789940-22790046 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156e-6 | Cucumis sativus (Cucumber) 2 | Chr3:22789940-22790046 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-5 | Cucumis sativus (Cucumber) 2 | Chr3:22789942-22790045 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-7 | Cucumis sativus (Cucumber) 2 | Chr3:22789942-22790045 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-6 | Cucumis sativus (Cucumber) 2 | Chr3:22789942-22790045 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-b2r1-29028 | Cucumis sativus (Cucumber) 2 | Chr3:26167217-26167350 | + | 1,301 | 2.00 | UAUUACUCUCUUGGCCGGUGA | | MIRNA | ShortStack |
csa-b2r1-29399 | Cucumis sativus (Cucumber) 2 | Chr3:27316641-27316917 | - | 101,655 | 156.17 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | ShortStack |
csa-MIR164a-2 | Cucumis sativus (Cucumber) 2 | Chr3:27316706-27316829 | - | 101,613 | 156.11 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | Ling_et_al_2017 |
csa-b2r1-29559 | Cucumis sativus (Cucumber) 2 | Chr3:27889196-27889414 | + | 45,826 | 70.40 | GCCCUCGGGUCGCAGAUUACC | miR2111 | MIRNA | ShortStack |
csa-MIR2111-1 | Cucumis sativus (Cucumber) 2 | Chr3:27889247-27889348 | + | 45,803 | 70.37 | GCCCUCGGGUCGCAGAUUACC | miR2111 | MIRNA | Ling_et_al_2017 |
csa-b2r1-30082 | Cucumis sativus (Cucumber) 2 | Chr3:29772069-29772159 | - | 385 | 0.59 | UAUUUCCUUGAAUUUCUUUCU | | MIRNA | ShortStack |
csa-b2r1-32309 | Cucumis sativus (Cucumber) 2 | Chr3:36644789-36644980 | - | 97,591 | 149.93 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | ShortStack |
csa-MIR171c-4 | Cucumis sativus (Cucumber) 2 | Chr3:36644841-36644952 | - | 97,566 | 149.89 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-7 | Cucumis sativus (Cucumber) 2 | Chr3:36644844-36644950 | - | 97,559 | 149.88 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-7 | Cucumis sativus (Cucumber) 2 | Chr3:36644844-36644950 | - | 97,559 | 149.88 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR168-1 | Cucumis sativus (Cucumber) 2 | Chr4:4716620-4716829 | - | 488,177 | 749.98 | UCGCUUGGUGCAGGUCGGGAA | miR168 | MIRNA | Ling_et_al_2017 |
csa-MIR46 | Cucumis sativus (Cucumber) 2 | Chr4:6339490-6339716 | - | 1,796 | 2.76 | UAGGAGAGCAGCAAAGGCUGG | | MIRNA | Ling_et_al_2017 |
csa-MIR168-2 | Cucumis sativus (Cucumber) 2 | Chr4:10111629-10111810 | - | 145,779 | 223.96 | CCCGCCUUGCAUCAACUGAAU | miR168 | MIRNA | Ling_et_al_2017 |
csa-b2r1-38110 | Cucumis sativus (Cucumber) 2 | Chr4:13051810-13052020 | + | 248,303 | 381.47 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | ShortStack |
csa-MIR390-6 | Cucumis sativus (Cucumber) 2 | Chr4:13051826-13051937 | + | 248,272 | 381.42 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | Ling_et_al_2017 |
csa-MIR390-5 | Cucumis sativus (Cucumber) 2 | Chr4:13051827-13051938 | + | 248,272 | 381.42 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | Ling_et_al_2017 |
csa-b2r1-38177 | Cucumis sativus (Cucumber) 2 | Chr4:13196306-13196580 | + | 54,786 | 84.17 | UGGAGAAGCAGGGCACGUGCU | miR164 | MIRNA | ShortStack |
csa-MIR164a-3 | Cucumis sativus (Cucumber) 2 | Chr4:13196325-13196555 | + | 54,779 | 84.16 | UGGAGAAGCAGGGCACGUGCU | miR164 | MIRNA | Ling_et_al_2017 |
csa-MIR164b-1 | Cucumis sativus (Cucumber) 2 | Chr4:13196325-13196555 | + | 54,779 | 84.16 | UGGAGAAGCAGGGCACGUGCU | miR164 | MIRNA | Ling_et_al_2017 |
csa-b2r1-40083 | Cucumis sativus (Cucumber) 2 | Chr4:18390246-18390542 | - | 547,068 | 840.45 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
csa-b2r1-41374 | Cucumis sativus (Cucumber) 2 | Chr4:22021896-22022069 | + | 29,145 | 44.78 | GCUUACUCUCUAUCUGUCACC | miR156 | MIRNA | ShortStack |
csa-MIR156c-9 | Cucumis sativus (Cucumber) 2 | Chr4:22021965-22022083 | + | 29,127 | 44.75 | GCUUACUCUCUAUCUGUCACC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-6 | Cucumis sativus (Cucumber) 2 | Chr4:22021966-22022080 | + | 29,127 | 44.75 | GCUUACUCUCUAUCUGUCACC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-8 | Cucumis sativus (Cucumber) 2 | Chr4:22021966-22022080 | + | 29,127 | 44.75 | GCUUACUCUCUAUCUGUCACC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-7 | Cucumis sativus (Cucumber) 2 | Chr4:22021966-22022080 | + | 29,127 | 44.75 | GCUUACUCUCUAUCUGUCACC | miR156 | MIRNA | Ling_et_al_2017 |
csa-b2r1-41604 | Cucumis sativus (Cucumber) 2 | Chr4:22620541-22620706 | - | 280,238 | 430.53 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
csa-MIR157-7 | Cucumis sativus (Cucumber) 2 | Chr4:22620584-22620686 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-10 | Cucumis sativus (Cucumber) 2 | Chr4:22620584-22620686 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156e-7 | Cucumis sativus (Cucumber) 2 | Chr4:22620584-22620686 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-7 | Cucumis sativus (Cucumber) 2 | Chr4:22620585-22620685 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-9 | Cucumis sativus (Cucumber) 2 | Chr4:22620585-22620685 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-8 | Cucumis sativus (Cucumber) 2 | Chr4:22620585-22620685 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-b2r1-41694 | Cucumis sativus (Cucumber) 2 | Chr4:22864740-22864948 | + | 48,897 | 75.12 | UUGGCAUUCUGUCCACCUCC | miR394 | MIRNA | ShortStack |
csa-MIR394-2 | Cucumis sativus (Cucumber) 2 | Chr4:22864782-22864916 | + | 48,885 | 75.10 | UUGGCAUUCUGUCCACCUCC | miR394 | MIRNA | Ling_et_al_2017 |
csa-b2r1-42420 | Cucumis sativus (Cucumber) 2 | Chr5:1704354-1704452 | + | 833 | 1.28 | UAGUAUCAUAGUUGGUGGUCC | | MIRNA | ShortStack |
csa-b2r1-43276 | Cucumis sativus (Cucumber) 2 | Chr5:4265271-4265565 | + | 1,885,477 | 2,896.64 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
csa-MIR166-5 | Cucumis sativus (Cucumber) 2 | Chr5:4265341-4265515 | + | 1,885,460 | 2,896.61 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-MIR33 | Cucumis sativus (Cucumber) 2 | Chr5:4663076-4663229 | + | 1,810,648 | 2,781.68 | UUGGACUGAAGGGAGCUCCC | miR319 | MIRNA | Ling_et_al_2017 |
csa-b2r1-43605 | Cucumis sativus (Cucumber) 2 | Chr5:5408023-5408132 | + | 8,376 | 12.87 | AGGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | ShortStack |
csa-MIR399b-1 | Cucumis sativus (Cucumber) 2 | Chr5:5408038-5408126 | + | 8,376 | 12.87 | AGGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR399a-1 | Cucumis sativus (Cucumber) 2 | Chr5:5408039-5408126 | + | 8,376 | 12.87 | AGGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR5 | Cucumis sativus (Cucumber) 2 | Chr5:5408039-5408127 | + | 8,376 | 12.87 | AGGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-b2r1-43607 | Cucumis sativus (Cucumber) 2 | Chr5:5412549-5412739 | + | 17,010 | 26.13 | GGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | ShortStack |
csa-MIR399b-2 | Cucumis sativus (Cucumber) 2 | Chr5:5412590-5412680 | + | 17,001 | 26.12 | GGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR399a-2 | Cucumis sativus (Cucumber) 2 | Chr5:5412592-5412680 | + | 17,001 | 26.12 | GGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR169e-7 | Cucumis sativus (Cucumber) 2 | Chr5:7351174-7351291 | - | 3,549 | 5.45 | UAGCCAAAGAUGACUUGCCUGU | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR169c-3 | Cucumis sativus (Cucumber) 2 | Chr5:7351175-7351290 | - | 3,547 | 5.45 | UAGCCAAAGAUGACUUGCCUGU | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR169e-6 | Cucumis sativus (Cucumber) 2 | Chr5:7360871-7361014 | + | 1,648 | 2.53 | UGAGCCAAACAUGACUUGCCU | miR169 | MIRNA | Ling_et_al_2017 |
csa-b2r1-44295 | Cucumis sativus (Cucumber) 2 | Chr5:7361126-7361277 | + | 4,523 | 6.95 | UAGCCAAAAAUGACUUGCCUGC | miR169 | MIRNA | ShortStack |
csa-b2r1-44809 | Cucumis sativus (Cucumber) 2 | Chr5:8638447-8638639 | - | 36,715 | 56.41 | UCCAAAGGGAUCGCAUUGAUC | miR393 | MIRNA | ShortStack |
csa-MIR393-2 | Cucumis sativus (Cucumber) 2 | Chr5:8638527-8638627 | - | 36,708 | 56.39 | UCCAAAGGGAUCGCAUUGAUC | miR393 | MIRNA | Ling_et_al_2017 |
csa-MIR31 | Cucumis sativus (Cucumber) 2 | Chr5:10279809-10279980 | + | 6,823 | 10.48 | AACUGCCGACUCAUUCACUCA | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR395-2 | Cucumis sativus (Cucumber) 2 | Chr5:17058964-17059090 | + | 467 | 0.72 | GUUCCCUUCCAAACACUUCAGA | miR395 | MIRNA | Ling_et_al_2017 |
csa-b2r1-48118 | Cucumis sativus (Cucumber) 2 | Chr5:17058977-17059080 | + | 467 | 0.72 | GUUCCCUUCCAAACACUUCAGA | miR395 | MIRNA | ShortStack |
csa-MIR395-3 | Cucumis sativus (Cucumber) 2 | Chr5:17071561-17071658 | + | 90 | 0.14 | GUUCCCUUCCAAGCACUUCAGG | miR395 | MIRNA | Ling_et_al_2017 |
csa-MIR10 | Cucumis sativus (Cucumber) 2 | Chr5:19951230-19951374 | + | 150,835 | 231.73 | UGCUGCUCAUUCGUUAGUUCA | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR26 | Cucumis sativus (Cucumber) 2 | Chr5:19951230-19951374 | + | 150,835 | 231.73 | UGCUGCUCAUUCGUUAGUUCA | miR319 | MIRNA | Ling_et_al_2017 |
csa-b2r1-49372 | Cucumis sativus (Cucumber) 2 | Chr5:20153551-20153827 | - | 299,370 | 459.92 | UUCCAAGUCCACCCAUGCCCGC | | MIRNA | ShortStack |
csa-MIR3 | Cucumis sativus (Cucumber) 2 | Chr5:20153611-20153755 | - | 299,333 | 459.86 | UUCCAAGUCCACCCAUGCCCGC | | MIRNA | Ling_et_al_2017 |
csa-b2r1-49649 | Cucumis sativus (Cucumber) 2 | Chr5:20905023-20905308 | + | 191,917 | 294.84 | UGCACUGCCUCUUCCCUGGCUG | miR408 | MIRNA | ShortStack |
csa-MIR408-1 | Cucumis sativus (Cucumber) 2 | Chr5:20905113-20905251 | + | 191,866 | 294.76 | UGCACUGCCUCUUCCCUGGCUG | miR408 | MIRNA | Ling_et_al_2017 |
csa-MIR408-2 | Cucumis sativus (Cucumber) 2 | Chr5:20905113-20905251 | + | 191,866 | 294.76 | UGCACUGCCUCUUCCCUGGCUG | miR408 | MIRNA | Ling_et_al_2017 |
csa-MIR18 | Cucumis sativus (Cucumber) 2 | Chr5:20905120-20905259 | + | 191,864 | 294.76 | UGCACUGCCUCUUCCCUGGCUG | miR408 | MIRNA | Ling_et_al_2017 |
csa-b2r1-50226 | Cucumis sativus (Cucumber) 2 | Chr5:22540847-22541034 | - | 1,529 | 2.35 | CUGAAGUGUUUGGGGGAACUC | miR395 | MIRNA | ShortStack |
csa-MIR395-5 | Cucumis sativus (Cucumber) 2 | Chr5:22540926-22541033 | - | 1,525 | 2.34 | CUGAAGUGUUUGGGGGAACUC | miR395 | MIRNA | Ling_et_al_2017 |
csa-MIR395-4 | Cucumis sativus (Cucumber) 2 | Chr5:22543353-22543448 | + | 1,651 | 2.54 | AGUUUCCCUGAAUAACUUCAUC | miR395 | MIRNA | Ling_et_al_2017 |
csa-MIR319a-3 | Cucumis sativus (Cucumber) 2 | Chr5:23952464-23952681 | + | 355,922 | 546.80 | UUGGACUGAAGGGAGCUCCC | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR319b-4 | Cucumis sativus (Cucumber) 2 | Chr5:23952464-23952680 | + | 355,922 | 546.80 | UUGGACUGAAGGGAGCUCCC | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR319a-4 | Cucumis sativus (Cucumber) 2 | Chr5:23952482-23952681 | + | 355,920 | 546.80 | UUGGACUGAAGGGAGCUCCC | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR4414 | Cucumis sativus (Cucumber) 2 | Chr5:23952531-23952636 | + | 12,496 | 19.20 | AGCUGCUGACUCGUUGGCUCA | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR160-1 | Cucumis sativus (Cucumber) 2 | Chr5:24808636-24808735 | + | 40,846 | 62.75 | UGCCUGGCUCCCUGUAUGCCA | miR160 | MIRNA | Ling_et_al_2017 |
csa-b2r1-51242 | Cucumis sativus (Cucumber) 2 | Chr5:26033013-26033228 | + | 12,267 | 18.85 | UCGCAGGAGAGAUGGCACCAAC | | MIRNA | ShortStack |
csa-MIR13 | Cucumis sativus (Cucumber) 2 | Chr5:26033052-26033168 | + | 12,242 | 18.81 | UCGCAGGAGAGAUGGCACCAAC | | MIRNA | Ling_et_al_2017 |
csa-MIR34 | Cucumis sativus (Cucumber) 2 | Chr5:26041747-26041861 | - | 6,992 | 10.74 | GACCAUUCUCUUGUGACAUA | | MIRNA | Ling_et_al_2017 |
csa-b2r1-51249 | Cucumis sativus (Cucumber) 2 | Chr5:26041751-26041904 | - | 6,999 | 10.75 | GACCAUUCUCUUGUGACAUA | | MIRNA | ShortStack |
csa-MIR8 | Cucumis sativus (Cucumber) 2 | Chr5:26043755-26043878 | + | 45,179 | 69.41 | CCGCAGGAGAGAUGACACCCAC | | MIRNA | Ling_et_al_2017 |
csa-MIR9 | Cucumis sativus (Cucumber) 2 | Chr5:27212125-27212246 | - | 32,411 | 49.79 | UAAGAGCUUCGAUAGUAACAUG | | MIRNA | Ling_et_al_2017 |
csa-MIR6 | Cucumis sativus (Cucumber) 2 | Chr5:27212573-27212691 | - | 52,509 | 80.67 | AACUGCCAUAAUAACAUGAAG | | MIRNA | Ling_et_al_2017 |
csa-MIR11 | Cucumis sativus (Cucumber) 2 | Chr5:27357271-27357399 | + | 4,256 | 6.54 | CGAGGCCUUAGGGGAGAGUACG | miR477 | MIRNA | Ling_et_al_2017 |
csa-b2r1-52254 | Cucumis sativus (Cucumber) 2 | Chr6:1038264-1038446 | + | 7,798 | 11.98 | UCCAAAGGGAUCGCAUUGAUC | miR393 | MIRNA | ShortStack |
csa-MIR393-3 | Cucumis sativus (Cucumber) 2 | Chr6:1038277-1038413 | + | 7,682 | 11.80 | UCCAAAGGGAUCGCAUUGAUC | miR393 | MIRNA | Ling_et_al_2017 |
csa-b2r1-53443 | Cucumis sativus (Cucumber) 2 | Chr6:4097383-4097456 | + | 1,716 | 2.64 | UUUAGAUAUCAACAGCACUGU | | MIRNA | ShortStack |
csa-b2r1-54189 | Cucumis sativus (Cucumber) 2 | Chr6:6265215-6265405 | - | 1,602 | 2.46 | UAGCCAAGGAUGACUUGCCUGC | miR169 | MIRNA | ShortStack |
csa-MIR44 | Cucumis sativus (Cucumber) 2 | Chr6:6265223-6265403 | - | 1,600 | 2.46 | UAGCCAAGGAUGACUUGCCUGC | miR169 | MIRNA | Ling_et_al_2017 |
csa-b2r1-54424 | Cucumis sativus (Cucumber) 2 | Chr6:7030205-7030301 | + | 5,695 | 8.75 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
csa-b2r1-54729 | Cucumis sativus (Cucumber) 2 | Chr6:7852253-7852456 | - | 635 | 0.98 | UCUUGUUCUUGAUUUUGCUGC | | MIRNA | ShortStack |
csa-b2r1-55658 | Cucumis sativus (Cucumber) 2 | Chr6:10216811-10217081 | - | 437,272 | 671.78 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | ShortStack |
csa-MIR172a-3 | Cucumis sativus (Cucumber) 2 | Chr6:10216873-10216985 | - | 437,253 | 671.75 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR172c-4 | Cucumis sativus (Cucumber) 2 | Chr6:10216874-10216984 | - | 437,253 | 671.75 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-b2r1-55679 | Cucumis sativus (Cucumber) 2 | Chr6:10267256-10267466 | + | 77,080 | 118.42 | UGCAUUUGCACCUACACCUUC | miR530 | MIRNA | ShortStack |
csa-MIR530 | Cucumis sativus (Cucumber) 2 | Chr6:10267323-10267412 | + | 77,057 | 118.38 | UGCAUUUGCACCUACACCUUC | miR530 | MIRNA | Ling_et_al_2017 |
csa-MIR390-7 | Cucumis sativus (Cucumber) 2 | Chr6:11751221-11751336 | - | 27,997 | 43.01 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | Ling_et_al_2017 |
csa-b2r1-56278 | Cucumis sativus (Cucumber) 2 | Chr6:11751227-11751357 | - | 28,001 | 43.02 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | ShortStack |
csa-b2r1-56500 | Cucumis sativus (Cucumber) 2 | Chr6:12350260-12350532 | - | 96,302 | 147.95 | GGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | ShortStack |
csa-MIR172a-4 | Cucumis sativus (Cucumber) 2 | Chr6:12350306-12350480 | - | 96,288 | 147.93 | GGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR172c-2 | Cucumis sativus (Cucumber) 2 | Chr6:12350306-12350479 | - | 96,288 | 147.93 | GGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR172c-5 | Cucumis sativus (Cucumber) 2 | Chr6:12350307-12350480 | - | 96,288 | 147.93 | GGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-b2r1-57195 | Cucumis sativus (Cucumber) 2 | Chr6:14067590-14067811 | + | 3,675 | 5.65 | UCGCAGAAGAGAUGGUGCCGU | | MIRNA | ShortStack |
csa-MIR14 | Cucumis sativus (Cucumber) 2 | Chr6:14067645-14067759 | + | 3,646 | 5.60 | UCGCAGAAGAGAUGGUGCCGU | | MIRNA | Ling_et_al_2017 |
csa-MIR156c-11 | Cucumis sativus (Cucumber) 2 | Chr6:16464229-16464382 | - | 495 | 0.76 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-8 | Cucumis sativus (Cucumber) 2 | Chr6:16464230-16464381 | - | 495 | 0.76 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-10 | Cucumis sativus (Cucumber) 2 | Chr6:16464230-16464381 | - | 495 | 0.76 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-9 | Cucumis sativus (Cucumber) 2 | Chr6:16464230-16464381 | - | 495 | 0.76 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-b2r1-58700 | Cucumis sativus (Cucumber) 2 | Chr6:17956697-17956813 | + | 3,873 | 5.95 | UGGAGAGGCAGGGCACAUGCU | miR164 | MIRNA | ShortStack |
csa-MIR164b-2 | Cucumis sativus (Cucumber) 2 | Chr6:17956729-17956818 | + | 3,869 | 5.94 | UGGAGAGGCAGGGCACAUGCU | miR164 | MIRNA | Ling_et_al_2017 |
csa-b2r1-58894 | Cucumis sativus (Cucumber) 2 | Chr6:18465230-18465499 | - | 315,845 | 485.23 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | ShortStack |
csa-MIR172a-5 | Cucumis sativus (Cucumber) 2 | Chr6:18465290-18465432 | - | 315,833 | 485.21 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR172c-3 | Cucumis sativus (Cucumber) 2 | Chr6:18465291-18465431 | - | 315,833 | 485.21 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR172c-6 | Cucumis sativus (Cucumber) 2 | Chr6:18465291-18465431 | - | 315,833 | 485.21 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-b2r1-58963 | Cucumis sativus (Cucumber) 2 | Chr6:18652784-18652979 | + | 8,870,711 | 13,627.96 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
csa-MIR166-7 | Cucumis sativus (Cucumber) 2 | Chr6:18652833-18652962 | + | 8,870,707 | 13,627.96 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-MIR166-8 | Cucumis sativus (Cucumber) 2 | Chr6:19158799-19158937 | + | 540,746 | 830.74 | UCUCGGACCAGGCUUCAUUCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-b2r1-61298 | Cucumis sativus (Cucumber) 2 | Chr6:26675616-26675696 | - | 355 | 0.55 | UUUGGAAUGAUUUCUAAGUUC | | MIRNA | ShortStack |
csa-MIR399c-3 | Cucumis sativus (Cucumber) 2 | Chr6:27676182-27676315 | - | 385 | 0.59 | GGGCAAUUACUCUUUUGGCAGA | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR25 | Cucumis sativus (Cucumber) 2 | Chr6:27676184-27676295 | - | 385 | 0.59 | GGGCAAUUACUCUUUUGGCAGA | miR399 | MIRNA | Ling_et_al_2017 |
csa-b2r1-61494 | Cucumis sativus (Cucumber) 2 | Chr6:27676192-27676284 | - | 384 | 0.59 | GGGCAAUUACUCUUUUGGCAGA | miR399 | MIRNA | ShortStack |
csa-b2r1-61495 | Cucumis sativus (Cucumber) 2 | Chr6:27678889-27679188 | + | 21,786 | 33.47 | UGCCAAAAGAGACUUGCCCUG | | MIRNA | ShortStack |
csa-MIR399b-3 | Cucumis sativus (Cucumber) 2 | Chr6:27678975-27679112 | + | 21,731 | 33.39 | UGCCAAAAGAGACUUGCCCUG | | MIRNA | Ling_et_al_2017 |
csa-MIR399b-4 | Cucumis sativus (Cucumber) 2 | Chr6:27682122-27682211 | + | 3,215 | 4.94 | UGCCAAAAGAGACUUGCCCUG | | MIRNA | Ling_et_al_2017 |
csa-b2r1-61496 | Cucumis sativus (Cucumber) 2 | Chr6:27682129-27682206 | + | 3,215 | 4.94 | UGCCAAAAGAGACUUGCCCUG | | MIRNA | ShortStack |
csa-b2r1-61642 | Cucumis sativus (Cucumber) 2 | Chr6:28412184-28412298 | + | 460 | 0.71 | CAGGUCAAUGCAGACAAUAAU | | MIRNA | ShortStack |
csa-b2r1-61710 | Cucumis sativus (Cucumber) 2 | Chr6:28939442-28939608 | + | 62,102 | 95.41 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | ShortStack |
csa-MIR167a-4 | Cucumis sativus (Cucumber) 2 | Chr6:28939468-28939569 | + | 62,091 | 95.39 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-4 | Cucumis sativus (Cucumber) 2 | Chr6:28939468-28939569 | + | 62,091 | 95.39 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-4 | Cucumis sativus (Cucumber) 2 | Chr6:28939468-28939569 | + | 62,091 | 95.39 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR171c-5 | Cucumis sativus (Cucumber) 2 | Chr7:2408681-2408790 | + | 26,265 | 40.35 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171e-5 | Cucumis sativus (Cucumber) 2 | Chr7:2408681-2408790 | + | 26,265 | 40.35 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-8 | Cucumis sativus (Cucumber) 2 | Chr7:2408684-2408787 | + | 26,265 | 40.35 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-8 | Cucumis sativus (Cucumber) 2 | Chr7:2408684-2408787 | + | 26,265 | 40.35 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-b2r1-62681 | Cucumis sativus (Cucumber) 2 | Chr7:2408695-2408791 | + | 26,266 | 40.35 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | ShortStack |
csa-b2r1-67093 | Cucumis sativus (Cucumber) 2 | Chr7:14051588-14051863 | + | 187,361 | 287.84 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | ShortStack |
csa-MIR167a-5 | Cucumis sativus (Cucumber) 2 | Chr7:14051641-14051798 | + | 187,346 | 287.82 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-5 | Cucumis sativus (Cucumber) 2 | Chr7:14051641-14051798 | + | 187,346 | 287.82 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-5 | Cucumis sativus (Cucumber) 2 | Chr7:14051641-14051798 | + | 187,346 | 287.82 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-b2r1-67096 | Cucumis sativus (Cucumber) 2 | Chr7:14060834-14061073 | + | 735,864 | 1,130.50 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | ShortStack |
csa-MIR167a-6 | Cucumis sativus (Cucumber) 2 | Chr7:14060892-14061000 | + | 735,848 | 1,130.47 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-6 | Cucumis sativus (Cucumber) 2 | Chr7:14060892-14061000 | + | 735,848 | 1,130.47 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-6 | Cucumis sativus (Cucumber) 2 | Chr7:14060892-14061000 | + | 735,848 | 1,130.47 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-b2r1-67528 | Cucumis sativus (Cucumber) 2 | Chr7:15347493-15347707 | - | 8,563 | 13.16 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | ShortStack |
csa-MIR164a-4 | Cucumis sativus (Cucumber) 2 | Chr7:15347573-15347657 | - | 8,536 | 13.11 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | Ling_et_al_2017 |