het siRNAsData from Lunardon et al. (2020)miRNA

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Genome

Capsicum annuum (Pepper) genome build 1.6 (can-b1.6)

Version v1.6 of Capsicum annuum cv. Criollo de Morelos 334 from The Pepper Genome Platform

Locus type


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Annotation source

Name contains:

Family contains:

NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
can-b1.6r1-10510Capsicum annuum (Pepper) 1.6chr01:493222-493420-1,025,8831,439.93UCGGACCAGGCUUCAUUCCCCmiR166MIRNAShortStack
can-MIR166c-m1Capsicum annuum (Pepper) 1.6chr01:493284-493405-1,025,8731,439.91UCGGACCAGGCUUCAUUCCCCmiR166MIRNAQin_et_al_2014
can-MIR319c-m1Capsicum annuum (Pepper) 1.6chr01:2960379-2960485-1,3241.86UUGCUGCCGACUCAUUCAUCCAmiR319MIRNAQin_et_al_2014
can-MIR159b-m1Capsicum annuum (Pepper) 1.6chr01:3712787-3712967+77,909109.35UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAQin_et_al_2014
can-MIRC1-m1Capsicum annuum (Pepper) 1.6chr01:17175614-17175704+1,2021.69AGAUUUGAGAACCUGAGGGUUMIRNAQin_et_al_2014
can-b1.6r1-12842Capsicum annuum (Pepper) 1.6chr01:17175616-17175727+1,2061.69AGAUUUGAGAACCUGAGGGUUMIRNAShortStack
can-b1.6r1-13464Capsicum annuum (Pepper) 1.6chr01:27166057-27166151-9451.33UAUUGGCCUGGUUCACUCAGAmiR171MIRNAShortStack
can-MIR171b-m1Capsicum annuum (Pepper) 1.6chr01:27166081-27166138-9361.31UAUUGGCCUGGUUCACUCAGAmiR171MIRNAQin_et_al_2014
can-MIR168b-m1Capsicum annuum (Pepper) 1.6chr01:46651896-46652185-50,90871.45UCGCUUGGUGCAGGUCGGGAAmiR168MIRNAQin_et_al_2014
can-b1.6r1-15252Capsicum annuum (Pepper) 1.6chr01:81116291-81116535-20,63828.97UUCGGCUCAUCGUUGUUGCAGACGMIRNAShortStack
can-b1.6r1-16932Capsicum annuum (Pepper) 1.6chr01:208787417-208787551-135,460190.13UUAGAUUCACGCACAAACUCGmiR403MIRNAShortStack
can-MIR403-m1Capsicum annuum (Pepper) 1.6chr01:208787456-208787556-135,456190.13UUAGAUUCACGCACAAACUCGmiR403MIRNAQin_et_al_2014
can-b1.6r1-19793Capsicum annuum (Pepper) 1.6chr01:303173453-303173600+117,957165.56UCGCUUGGUGCAGGUCGGGACmiR168MIRNAShortStack
can-MIR166b-m1Capsicum annuum (Pepper) 1.6chr01:306510706-306510824+18,65826.19UCGGACCAGGCUUCAUUCCCCmiR166MIRNAQin_et_al_2014
can-b1.6r1-20181Capsicum annuum (Pepper) 1.6chr01:306510708-306510892+18,77026.35UCGGACCAGGCUUCAUUCCCCmiR166MIRNAShortStack
can-MIR171a-m1Capsicum annuum (Pepper) 1.6chr02:4461830-4461918-6280.88UAUUGGCCUGGUUCACUCAGAmiR171MIRNAQin_et_al_2014
can-b1.6r1-20754Capsicum annuum (Pepper) 1.6chr02:4461843-4461915-6280.88UAUUGGCCUGGUUCACUCAGAmiR171MIRNAShortStack
can-b1.6r1-24787Capsicum annuum (Pepper) 1.6chr02:152119244-152119413-4,0065.62UAUUGGCCUGGUUCACUCAGAmiR171MIRNAShortStack
can-MIR171g-m1Capsicum annuum (Pepper) 1.6chr02:152119301-152119403-3,9945.61UAUUGGCCUGGUUCACUCAGAmiR171MIRNAQin_et_al_2014
can-b1.6r1-25492Capsicum annuum (Pepper) 1.6chr02:157306012-157306126-43,49561.05UUGACAGAAGAUAGAGAGCACmiR156MIRNAShortStack
can-MIR156c-m1Capsicum annuum (Pepper) 1.6chr02:157306026-157306115-43,49361.05UUGACAGAAGAUAGAGAGCACmiR156MIRNAQin_et_al_2014
can-MIR3627-m1Capsicum annuum (Pepper) 1.6chr02:165612131-165612227+1,2841.80UCGCAGGAGAGAUGGCACUUAmiR3627MIRNAQin_et_al_2014
can-MIR169b-m1Capsicum annuum (Pepper) 1.6chr02:166508056-166508185+2790.39CAGCCAAGGAUGACUUGCCGGmiR169MIRNAQin_et_al_2014
can-b1.6r1-28950Capsicum annuum (Pepper) 1.6chr03:16144978-16145275+3,1724.45UCUUGGUCAAUCAAUUGUAUCMIRNAShortStack
can-MIR166e-m1Capsicum annuum (Pepper) 1.6chr03:20683060-20683181+125,316175.89UCGGACCAGGCUUCAUUCCCCmiR166MIRNAQin_et_al_2014
can-b1.6r1-29362Capsicum annuum (Pepper) 1.6chr03:21431648-21431749-116,554163.60UGAAGCUGCCAGCAUGAUCUAmiR167MIRNAShortStack
can-MIR167c-m1Capsicum annuum (Pepper) 1.6chr03:21431652-21431726-116,551163.59UGAAGCUGCCAGCAUGAUCUAmiR167MIRNAQin_et_al_2014
can-MIR164c-m1Capsicum annuum (Pepper) 1.6chr03:29242771-29242858+1350.19UGGAGAAGCAGGGCACAUGUUmiR164MIRNAQin_et_al_2014
can-MIR167b-m1Capsicum annuum (Pepper) 1.6chr03:143545613-143545724+61,02685.66UGAAGCUGCCAGCAUGAUCUAmiR167MIRNAQin_et_al_2014
can-b1.6r1-31198Capsicum annuum (Pepper) 1.6chr03:143545619-143545720+61,02685.66UGAAGCUGCCAGCAUGAUCUAmiR167MIRNAShortStack
can-b1.6r1-31221Capsicum annuum (Pepper) 1.6chr03:145850513-145850599+4,4996.32GAUCAUGUGGCAGCAUCACCmiR167MIRNAShortStack
can-MIR167a-m1Capsicum annuum (Pepper) 1.6chr03:145850519-145850602+4,4996.32GAUCAUGUGGCAGCAUCACCmiR167MIRNAQin_et_al_2014
can-MIR399e-m1Capsicum annuum (Pepper) 1.6chr03:219314091-219314198+1,7172.41GGGCGACUCUCUAUUGGCAUGmiR399MIRNAQin_et_al_2014
can-b1.6r1-31774Capsicum annuum (Pepper) 1.6chr03:219314092-219314191+1,7172.41GGGCGACUCUCUAUUGGCAUGmiR399MIRNAShortStack
can-b1.6r1-31803Capsicum annuum (Pepper) 1.6chr03:221220789-221220995-101,831142.93UUCAGGCCUGAGAAACGAAAAACUMIRNAShortStack
can-MIRC16.1-m1Capsicum annuum (Pepper) 1.6chr03:224947736-224947992-55,54477.96AAACGUUGAACUUGUCGGUAUMIRNAQin_et_al_2014
can-MIRC16.2-m1Capsicum annuum (Pepper) 1.6chr03:224947736-224947992-55,54477.96AAACGUUGAACUUGUCGGUAUMIRNAQin_et_al_2014
can-MIRC16.3-m1Capsicum annuum (Pepper) 1.6chr03:224947736-224947992-55,54477.96AAACGUUGAACUUGUCGGUAUMIRNAQin_et_al_2014
can-b1.6r1-31961Capsicum annuum (Pepper) 1.6chr03:230006712-230006913-10,03914.09UCCAAAGGGAUCGCAUUGAUCCmiR393MIRNAShortStack
can-MIR393a-m1Capsicum annuum (Pepper) 1.6chr03:230006838-230006915-9,96013.98UCCAAAGGGAUCGCAUUGAUCCmiR393MIRNAQin_et_al_2014
can-b1.6r1-32657Capsicum annuum (Pepper) 1.6chr03:249358808-249358926-21,27729.86CGUGAUAUUGGUUCGGCUCACUMIRNAShortStack
can-b1.6r1-32737Capsicum annuum (Pepper) 1.6chr03:249936871-249937014+3,306,1584,640.51UCGGACCAGGCUUCAUUCCCCmiR166MIRNAShortStack
can-MIR166d-m1Capsicum annuum (Pepper) 1.6chr03:249936872-249937012+3,306,1584,640.51UCGGACCAGGCUUCAUUCCCCmiR166MIRNAQin_et_al_2014
can-MIRC4-m1Capsicum annuum (Pepper) 1.6chr03:256979886-256979972+7981.12UGCUUGUAGUAACUAUGGUAAMIRNAQin_et_al_2014
can-b1.6r1-33323Capsicum annuum (Pepper) 1.6chr03:256979888-256979974+7981.12UGCUUGUAGUAACUAUGGUAAMIRNAShortStack
can-b1.6r1-33513Capsicum annuum (Pepper) 1.6chr03:258571150-258571344-6,7879.53UGUUGGAACGGCUCAAUCAAAmiR171MIRNAShortStack
can-MIR171c-m1Capsicum annuum (Pepper) 1.6chr03:258571242-258571333-6,6449.33UGUUGGAACGGCUCAAUCAAAmiR171MIRNAQin_et_al_2014
can-MIR162c-m1Capsicum annuum (Pepper) 1.6chr03:267603532-267603637+14,71020.65UCGAUAAACCUCUGCAUCCAGmiR162MIRNAQin_et_al_2014
can-b1.6r1-34245Capsicum annuum (Pepper) 1.6chr03:267603537-267603645+14,71020.65UCGAUAAACCUCUGCAUCCAGmiR162MIRNAShortStack
can-MIR162b.1-m1Capsicum annuum (Pepper) 1.6chr03:267691841-267691929+1,6242.28UCGAUAAACCUCUGCAUCCAGmiR162MIRNAQin_et_al_2014
can-MIR162b.2-m1Capsicum annuum (Pepper) 1.6chr03:267691841-267691929+1,6242.28UCGAUAAACCUCUGCAUCCAGmiR162MIRNAQin_et_al_2014
can-b1.6r1-34344Capsicum annuum (Pepper) 1.6chr03:268472905-268473081-8481.19UCGAUAAACCUCUGCAUCCAGmiR162MIRNAShortStack
can-MIR162e.1-m1Capsicum annuum (Pepper) 1.6chr03:268472912-268473002-8311.17UCGAUAAACCUCUGCAUCCAGmiR162MIRNAQin_et_al_2014
can-MIR162e.2-m1Capsicum annuum (Pepper) 1.6chr03:268472912-268473002-8311.17UCGAUAAACCUCUGCAUCCAGmiR162MIRNAQin_et_al_2014
can-b1.6r1-34352Capsicum annuum (Pepper) 1.6chr03:268574533-268574656-36,08550.65UCGAUAAACCUCUGCAUCCAGmiR162MIRNAShortStack
can-MIR162d-m1Capsicum annuum (Pepper) 1.6chr03:268574550-268574632-36,08350.65UCGAUAAACCUCUGCAUCCAGmiR162MIRNAQin_et_al_2014
can-b1.6r1-34364Capsicum annuum (Pepper) 1.6chr03:268721947-268722035-2,5093.52CUACCAACUCCACCCAUUCCUGMIRNAShortStack
can-MIR482c-m1Capsicum annuum (Pepper) 1.6chr03:268721958-268722045-2,5103.52CUACCAACUCCACCCAUUCCUGMIRNAQin_et_al_2014
can-MIR1446a.1-m1Capsicum annuum (Pepper) 1.6chr03:276000632-276000738-4,2035.90UGAACUCUCUCCCUCAAUGGCUmiR1446MIRNAQin_et_al_2014
can-MIR1446a.2-m1Capsicum annuum (Pepper) 1.6chr03:276000632-276000738-4,2035.90UGAACUCUCUCCCUCAAUGGCUmiR1446MIRNAQin_et_al_2014
can-MIR1446b.1-m1Capsicum annuum (Pepper) 1.6chr03:276009118-276009208-3,3044.64UGAACUCUCUCCCUCAAUGGCUmiR1446MIRNAQin_et_al_2014
can-MIR1446b.2-m1Capsicum annuum (Pepper) 1.6chr03:276009118-276009208-3,3044.64UGAACUCUCUCCCUCAAUGGCUmiR1446MIRNAQin_et_al_2014
can-b1.6r1-35282Capsicum annuum (Pepper) 1.6chr03:277524872-277525001+21,49730.17UUGACAGAAGAUAGAGAGCACmiR156MIRNAShortStack
can-MIR156b-m1Capsicum annuum (Pepper) 1.6chr03:277524880-277524999+21,49630.17UUGACAGAAGAUAGAGAGCACmiR156MIRNAQin_et_al_2014
can-b1.6r1-35299Capsicum annuum (Pepper) 1.6chr03:277675918-277676165+604,756848.83UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAShortStack
can-MIR159c.1-m1Capsicum annuum (Pepper) 1.6chr03:277675983-277676165+604,750848.83UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAQin_et_al_2014
can-MIR159c.2-m1Capsicum annuum (Pepper) 1.6chr03:277675983-277676165+604,750848.83UUUGGAUUGAAGGGAGCUCUAmiR159MIRNAQin_et_al_2014
can-MIR169k-m1Capsicum annuum (Pepper) 1.6chr04:23667984-23668107-5260.74UAGCCAAGGAUGACUUGCCUGmiR169MIRNAQin_et_al_2014
can-MIR172d-m1Capsicum annuum (Pepper) 1.6chr04:27359071-27359190-6,8569.62AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAQin_et_al_2014
can-b1.6r1-37567Capsicum annuum (Pepper) 1.6chr04:27359073-27359236-6,8739.65AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAShortStack
can-b1.6r1-37670Capsicum annuum (Pepper) 1.6chr04:36152810-36153010-6,1398.62AUGGAUGAACAAUGCUGAAACAUUMIRNAShortStack
can-b1.6r1-38640Capsicum annuum (Pepper) 1.6chr04:183013597-183013746-24,25534.04UCUUACCGAUACCUCCCAUUCCMIRNAShortStack
can-MIR1507-m1Capsicum annuum (Pepper) 1.6chr04:183013615-183013733-24,25334.04UCUUACCGAUACCUCCCAUUCCMIRNAQin_et_al_2014
can-MIR5301-m1Capsicum annuum (Pepper) 1.6chr04:183086663-183086771-2,019,9772,835.23UCUUUCCUACUCCUCCCAUACCmiR482MIRNAQin_et_al_2014
can-b1.6r1-38717Capsicum annuum (Pepper) 1.6chr04:187884810-187885087-45,67664.11UUUCCAAUUCCACCCAUUCCUAmiR482MIRNAShortStack
can-MIR482a-m1Capsicum annuum (Pepper) 1.6chr04:187884897-187884993-45,20863.45UUUCCAAUUCCACCCAUUCCUAmiR482MIRNAQin_et_al_2014
can-b1.6r1-43111Capsicum annuum (Pepper) 1.6chr05:7683334-7683602+4,2175.92AGAAUCUUGAUGAUGCUGCAGmiR172MIRNAShortStack
can-MIR172e-m1Capsicum annuum (Pepper) 1.6chr05:7683335-7683435+4,0645.70AGAAUCUUGAUGAUGCUGCAGmiR172MIRNAQin_et_al_2014
can-MIRC27-m1Capsicum annuum (Pepper) 1.6chr05:45564956-45565045+7,97311.19UUUCCAAAAUCUUAUGACAAGMIRNAQin_et_al_2014
can-b1.6r1-44454Capsicum annuum (Pepper) 1.6chr05:45564958-45565045+7,97311.19UUUCCAAAAUCUUAUGACAAGMIRNAShortStack
can-MIR5300-m1Capsicum annuum (Pepper) 1.6chr05:59799046-59799268-26,22236.81UUCCCAGUCCAGGCAUUCCAACmiR5300MIRNAQin_et_al_2014
can-MIRC7.1-m1Capsicum annuum (Pepper) 1.6chr05:195053446-195053616+17,91925.15UUAUGAGAUAAGUUCAACACGMIRNAQin_et_al_2014
can-MIRC7.2-m1Capsicum annuum (Pepper) 1.6chr05:195053446-195053616+17,91925.15UUAUGAGAUAAGUUCAACACGMIRNAQin_et_al_2014
can-MIR172g-m1Capsicum annuum (Pepper) 1.6chr05:237652831-237652935-9,31713.08AGAAUCUUGAUGCUGCUGCAUmiR172MIRNAQin_et_al_2014
can-b1.6r1-47284Capsicum annuum (Pepper) 1.6chr05:237652831-237653091-9,38113.17AGAAUCUUGAUGCUGCUGCAUmiR172MIRNAShortStack
can-b1.6r1-47426Capsicum annuum (Pepper) 1.6chr05:238245087-238245225-21,59630.31UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAShortStack
can-MIR160a-m1Capsicum annuum (Pepper) 1.6chr05:238245134-238245222-21,57430.28UGCCUGGCUCCCUGUAUGCCAmiR160MIRNAQin_et_al_2014
can-MIR4414b-m1Capsicum annuum (Pepper) 1.6chr06:10480546-10480636+5,0787.13AUCUGCCGACUCAUUCAUUCAmiR319MIRNAQin_et_al_2014
can-b1.6r1-48450Capsicum annuum (Pepper) 1.6chr06:10946637-10946931+39,10254.88UUUGGAUGUGCACAAGUAGACCCUMIRNAShortStack
can-MIR166f-m1Capsicum annuum (Pepper) 1.6chr06:42707333-42707433+130,785183.57UCGGACCAGGCUUCAUUCCCCmiR166MIRNAQin_et_al_2014
can-b1.6r1-49043Capsicum annuum (Pepper) 1.6chr06:42707333-42707438+130,785183.57UCGGACCAGGCUUCAUUCCCCmiR166MIRNAShortStack
can-b1.6r1-49314Capsicum annuum (Pepper) 1.6chr06:101485143-101485231-4,1665.85UGACAGAAGAGAGUGAGCACmiR156MIRNAShortStack
can-MIR156e-m1Capsicum annuum (Pepper) 1.6chr06:101485145-101485233-4,1665.85UGACAGAAGAGAGUGAGCACmiR156MIRNAQin_et_al_2014
can-MIR399d-m1Capsicum annuum (Pepper) 1.6chr06:132455317-132455412-3600.51GGGUUGCUCUCUAUUGGCAUGMIRNAQin_et_al_2014
can-b1.6r1-49805Capsicum annuum (Pepper) 1.6chr06:163805260-163805444-85,564120.10ACGCAGGAGAGAUGAUGCUGGAmiR391MIRNAShortStack
can-MIR4376-m1Capsicum annuum (Pepper) 1.6chr06:163805306-163805420-85,557120.09ACGCAGGAGAGAUGAUGCUGGAmiR391MIRNAQin_et_al_2014
can-MIR482b-m1Capsicum annuum (Pepper) 1.6chr06:177068550-177068754-334,092468.93UCUUGCCUACACCGCCCAUGCCmiR482MIRNAQin_et_al_2014
can-b1.6r1-51773Capsicum annuum (Pepper) 1.6chr06:222814158-222814260-388,120544.76UUGACAGAAGAUAGAGAGCACmiR156MIRNAShortStack
can-MIR156a-m1Capsicum annuum (Pepper) 1.6chr06:222814160-222814259-388,120544.76UUGACAGAAGAUAGAGAGCACmiR156MIRNAQin_et_al_2014
can-MIR171e-m1Capsicum annuum (Pepper) 1.6chr06:229404450-229404537+6,9729.79UGAUUGAGCCGUGCCAAUAUCmiR171MIRNAQin_et_al_2014
can-b1.6r1-52400Capsicum annuum (Pepper) 1.6chr06:230163872-230164027-5,4417.64UGAUAGCCAAGGAUGACUGGUMIRNAShortStack
can-MIR169l-m1Capsicum annuum (Pepper) 1.6chr06:230163885-230164010-5,4387.63UGAUAGCCAAGGAUGACUGGUMIRNAQin_et_al_2014
can-MIR167d-m1Capsicum annuum (Pepper) 1.6chr06:240767473-240767555-7,52510.56UGAAGCUGCCAGCAUGAUCUAmiR167MIRNAQin_et_al_2014
can-b1.6r1-53937Capsicum annuum (Pepper) 1.6chr06:240767473-240767609-7,63210.71UGAAGCUGCCAGCAUGAUCUAmiR167MIRNAShortStack
can-b1.6r1-55059Capsicum annuum (Pepper) 1.6chr07:9160426-9160549-1,0171.43CAUGUUGCUCGGACUCUACAMIRNAShortStack
can-b1.6r1-55125Capsicum annuum (Pepper) 1.6chr07:9790727-9790887-18,63026.15UGACAGAAGAGAGUGAGCACmiR156MIRNAShortStack
can-MIR156f-m1Capsicum annuum (Pepper) 1.6chr07:9790735-9790826-18,60326.11UGACAGAAGAGAGUGAGCACmiR156MIRNAQin_et_al_2014
can-b1.6r1-55235Capsicum annuum (Pepper) 1.6chr07:11227212-11227428-1,4992.10GACUGGAUACAAUUGUAGAACAUUMIRNAShortStack
can-MIR169i-m1Capsicum annuum (Pepper) 1.6chr07:18573372-18573465+1740.24UAGCCAAGGAUGACUUGCCUGmiR169MIRNAQin_et_al_2014
can-b1.6r1-55824Capsicum annuum (Pepper) 1.6chr07:29086928-29087135-93,736131.57UUCCACAGCUUUCUUGAACUUmiR396MIRNAShortStack
can-MIR396c-m1Capsicum annuum (Pepper) 1.6chr07:29086999-29087105-92,288129.54UUCCACAGCUUUCUUGAACUUmiR396MIRNAQin_et_al_2014
can-MIR171i-m1Capsicum annuum (Pepper) 1.6chr07:30723128-30723236-5810.82UUGAGCCGCGCCAAUAUCAUUmiR171MIRNAQin_et_al_2014
can-b1.6r1-58129Capsicum annuum (Pepper) 1.6chr07:228422819-228422899-4,5886.44ACCCCUGUGAGGACUACCAAACUUMIRNAShortStack
can-b1.6r1-59530Capsicum annuum (Pepper) 1.6chr07:243167883-243168096-171,838241.19AUUGAGUGCAGCGUUGAUGACmiR397MIRNAShortStack
can-MIR397a-m1Capsicum annuum (Pepper) 1.6chr07:243167906-243167999-171,799241.14AUUGAGUGCAGCGUUGAUGACmiR397MIRNAQin_et_al_2014
can-MIR397b-m1Capsicum annuum (Pepper) 1.6chr07:243167906-243167999-171,799241.14AUUGAGUGCAGCGUUGAUGACmiR397MIRNAQin_et_al_2014
can-MIR156g-m1Capsicum annuum (Pepper) 1.6chr07:248257650-248257732-1250.18UUGACAGAAGAGAGAGAGUACmiR156MIRNAQin_et_al_2014
can-b1.6r1-61699Capsicum annuum (Pepper) 1.6chr08:113569234-113569381-3,4444.83UGGCAAGCAUCUUUGGCAACUmiR169MIRNAShortStack
can-b1.6r1-62103Capsicum annuum (Pepper) 1.6chr08:126474910-126475044+3,4254.81AUUUGGAGAUGUCAGGUAGGAAGCMIRNAShortStack
can-MIR477b-m1Capsicum annuum (Pepper) 1.6chr08:135650518-135650604+10,73615.07CCUCUCCCUCAAGGGCUUCUUmiR477MIRNAQin_et_al_2014
can-MIR477a-m1Capsicum annuum (Pepper) 1.6chr08:135650667-135650762+4,1035.76ACUCUCCCUCAAAGGCUUCUGmiR477MIRNAQin_et_al_2014
can-MIR166a-m1Capsicum annuum (Pepper) 1.6chr08:136685304-136685450+265,586372.78UCGGACCAGGCUUCAUUCCCCmiR166MIRNAQin_et_al_2014
can-b1.6r1-62517Capsicum annuum (Pepper) 1.6chr08:136685308-136685562+265,722372.97UCGGACCAGGCUUCAUUCCCCmiR166MIRNAShortStack
can-MIRC6-m1Capsicum annuum (Pepper) 1.6chr08:138981297-138981467+1700.24AUUGGGUAUCGUUUGUAGACAACCMIRNAQin_et_al_2014
can-b1.6r1-62773Capsicum annuum (Pepper) 1.6chr08:139255441-139255695+23,40832.86UAGAGUGGCCACAACUAGAUGMIRNAShortStack
can-MIRC18-m1Capsicum annuum (Pepper) 1.6chr09:3159393-3159521+14,09319.78AGGAAGGAACUCCACGUCAUUGCUMIRNAQin_et_al_2014
can-MIR482d-m1Capsicum annuum (Pepper) 1.6chr09:4978111-4978217-16,95823.80CUUUGUCAUUGUCAUCGUUGCUUGMIRNAQin_et_al_2014
can-MIR160b-m1Capsicum annuum (Pepper) 1.6chr09:10548884-10548973-2810.39UGCCUGGCUCCUUGUAUGCCAmiR160MIRNAQin_et_al_2014
can-b1.6r1-66008Capsicum annuum (Pepper) 1.6chr09:162147116-162147233-6,1528.64AAGCUCAGGAGGGAUAGCGCCmiR390MIRNAShortStack
can-MIR390a-m1Capsicum annuum (Pepper) 1.6chr09:162147120-162147227-6,1528.64AAGCUCAGGAGGGAUAGCGCCmiR390MIRNAQin_et_al_2014
can-b1.6r1-66681Capsicum annuum (Pepper) 1.6chr09:244266115-244266238+8,52311.96UUGAGCCGCGCCAAUAUCACGmiR171MIRNAShortStack
can-MIR171j-m1Capsicum annuum (Pepper) 1.6chr09:244266124-244266213+8,52211.96UUGAGCCGCGCCAAUAUCACGmiR171MIRNAQin_et_al_2014
can-b1.6r1-68308Capsicum annuum (Pepper) 1.6chr09:269862993-269863150+49,13568.97UUGACAGAAGAGAGUGAGCAUmiR156MIRNAShortStack
can-MIR156h-m1Capsicum annuum (Pepper) 1.6chr09:269862995-269863085+49,13168.96UUGACAGAAGAGAGUGAGCAUmiR156MIRNAQin_et_al_2014
can-MIR156i-m1Capsicum annuum (Pepper) 1.6chr09:269862995-269863085+49,13168.96UUGACAGAAGAGAGUGAGCAUmiR156MIRNAQin_et_al_2014
can-b1.6r1-68462Capsicum annuum (Pepper) 1.6chr09:270522175-270522417-25,24135.43UUCCACAGCUUUCUUGAACUAmiR396MIRNAShortStack
can-MIR396d-m1Capsicum annuum (Pepper) 1.6chr09:270522187-270522405-25,23935.43UUCCACAGCUUUCUUGAACUAmiR396MIRNAQin_et_al_2014
can-MIR171h-m1Capsicum annuum (Pepper) 1.6chr09:270541456-270541572-1,4502.04UUGAGCCGCGCCAAUAUCACUmiR171MIRNAQin_et_al_2014
can-b1.6r1-69082Capsicum annuum (Pepper) 1.6chr10:3460349-3460593+1,3031.83UUCUAGGGUUCUAGCAAGUUGACCMIRNAShortStack
can-MIRC23-m1Capsicum annuum (Pepper) 1.6chr10:56145144-56145256+3470.49UGACGUUAAGAUAGACCGUGCGMIRNAQin_et_al_2014
can-b1.6r1-71037Capsicum annuum (Pepper) 1.6chr10:161246618-161246759-10,96815.40AAGCUCAGGAGGGAUAGCACCmiR390MIRNAShortStack
can-MIR390b-m1Capsicum annuum (Pepper) 1.6chr10:161246647-161246746-10,96115.39AAGCUCAGGAGGGAUAGCACCmiR390MIRNAQin_et_al_2014
can-MIR169a-m1Capsicum annuum (Pepper) 1.6chr10:195781097-195781218+7851.10ACAUCCAAGGAUGACUUGCUGMIRNAQin_et_al_2014
can-MIR169c-m1Capsicum annuum (Pepper) 1.6chr10:195781118-195781198+7261.02ACAUCCAAGGAUGACUUGCUGMIRNAQin_et_al_2014
can-b1.6r1-71581Capsicum annuum (Pepper) 1.6chr10:195825562-195825710-6,1948.69UGGAGAAGCAGGGCGCGUGCAmiR164MIRNAShortStack
can-MIR164b-m1Capsicum annuum (Pepper) 1.6chr10:195825579-195825718-6,1928.69UGGAGAAGCAGGGCGCGUGCAmiR164MIRNAQin_et_al_2014
can-MIR172h-m1Capsicum annuum (Pepper) 1.6chr10:214920964-214921049-5,7728.10UGAAUCUUGAUGAUGCUGCAUmiR172MIRNAQin_et_al_2014
can-b1.6r1-72111Capsicum annuum (Pepper) 1.6chr10:214920966-214921070-5,7778.11UGAAUCUUGAUGAUGCUGCAUmiR172MIRNAShortStack
can-MIR166i-m1Capsicum annuum (Pepper) 1.6chr10:226967948-226968154-1,388,6171,949.06UCUCGGACCAGGCUUCAUUCCmiR166MIRNAQin_et_al_2014
can-MIRC11-m1Capsicum annuum (Pepper) 1.6chr10:231582952-231583098+1,8062.54UCAGAAUAUGAUGAUGUGAGCUUMIRNAQin_et_al_2014
can-b1.6r1-73770Capsicum annuum (Pepper) 1.6chr10:231582955-231583130+1,8122.54UCAGAAUAUGAUGAUGUGAGCUUMIRNAShortStack
can-b1.6r1-75768Capsicum annuum (Pepper) 1.6chr11:18228932-18229159-9,26313.00UGCACGCAAGAUGGUCCGGACAMIRNAShortStack
can-MIR395i-m1Capsicum annuum (Pepper) 1.6chr11:31607757-31607837+2170.31CUGAAGUGUUUGGGGGAACUCmiR395MIRNAQin_et_al_2014
can-MIR395g-m1Capsicum annuum (Pepper) 1.6chr11:31650558-31650634+480.07CUGAAGUGUUUGGGGGAACUCmiR395MIRNAQin_et_al_2014
can-MIR395f-m1Capsicum annuum (Pepper) 1.6chr11:31841368-31841444+1590.22CUGAAGUGUUUGGGGGAACUCmiR395MIRNAQin_et_al_2014
can-MIR395b-m1Capsicum annuum (Pepper) 1.6chr11:32179165-32179325-1670.23CUGAAGUGUUUGGGGGAACUCmiR395MIRNAQin_et_al_2014
can-MIR395k-m1Capsicum annuum (Pepper) 1.6chr11:32179165-32179325-1670.23CUGAAGUGUUUGGGGGAACUCmiR395MIRNAQin_et_al_2014
can-MIR395c-m1Capsicum annuum (Pepper) 1.6chr11:32179296-32179368-1580.22CUGAAGUGUUUGGGGGAACUCmiR395MIRNAQin_et_al_2014
can-b1.6r1-77484Capsicum annuum (Pepper) 1.6chr11:182607605-182607812-8,97912.60UAUGUUCUCAGGUCACCCCUAMIRNAShortStack
can-MIR398e-m1Capsicum annuum (Pepper) 1.6chr11:182607693-182607793-8,96412.58UAUGUUCUCAGGUCACCCCUAMIRNAQin_et_al_2014
can-b1.6r1-77866Capsicum annuum (Pepper) 1.6chr11:230710139-230710361+5,0697.12ACAUGGGUUAAGUAAAAUGAAACUMIRNAShortStack
can-b1.6r1-79808Capsicum annuum (Pepper) 1.6chr11:265269883-265269981+3,1874.47UUUGAUGCUCUUUGUUUGACAMIRNAShortStack
can-b1.6r1-79822Capsicum annuum (Pepper) 1.6chr11:265358160-265358274+2,4013.37UUUGAUGCUCUUUGUUUGACAMIRNAShortStack
can-b1.6r1-79829Capsicum annuum (Pepper) 1.6chr11:265390103-265390187+1,1431.60UUUGAUGCUCUUUGUUUGACAMIRNAShortStack
can-MIR172c-m1Capsicum annuum (Pepper) 1.6chr11:266059883-266060032-3,2594.57AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAQin_et_al_2014
can-MIRC2a-m1Capsicum annuum (Pepper) 1.6chr12:3787622-3787709-28,95240.64UUGCAAACACACCUGAAUCGUMIRNAQin_et_al_2014
can-b1.6r1-80552Capsicum annuum (Pepper) 1.6chr12:3787630-3787708-28,95240.64UUGCAAACACACCUGAAUCGUMIRNAShortStack
can-MIRC2b-m1Capsicum annuum (Pepper) 1.6chr12:3853939-3854025-18,78126.36UUGCAAACACACCUGAAUCGUMIRNAQin_et_al_2014
can-MIR172b-m1Capsicum annuum (Pepper) 1.6chr12:12357190-12357315+1,0651.50AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAQin_et_al_2014
can-b1.6r1-81597Capsicum annuum (Pepper) 1.6chr12:12376086-12376317+12,28717.25AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAShortStack
can-MIR172a-m1Capsicum annuum (Pepper) 1.6chr12:12376169-12376260+12,27017.22AGAAUCUUGAUGAUGCUGCAUmiR172MIRNAQin_et_al_2014
can-MIR156d-m1Capsicum annuum (Pepper) 1.6chr12:238466081-238466173+11,25715.80UGACAGAAGAGAGUGAGCACmiR156MIRNAQin_et_al_2014
can-b1.6r1-85325Capsicum annuum (Pepper) 1.6chr12:241989955-241990087+368,617517.39UCGCUUGGUGCAGGUCGGGACmiR168MIRNAShortStack
can-MIR398c-m1Capsicum annuum (Pepper) 1.6chr12:250482740-250482846-390,048547.47UGUGUUCUCAGGUCGCCCCUGmiR398MIRNAQin_et_al_2014
can-b1.6r1-2149Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold1248:450419-450685+479,066672.42ACGGGGACGAGGCAGAGCAUGmiR408MIRNAShortStack
can-b1.6r1-2151Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold1248:480059-480340+140,527197.24ACAGGGACGAGGCAGCGCAUGmiR408MIRNAShortStack
can-MIR408-m1Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold1248:480126-480210+140,494197.20ACAGGGACGAGGCAGCGCAUGmiR408MIRNAQin_et_al_2014
can-b1.6r1-3407Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold1459:352010-352234+166,336233.47UGGAGAAGCAGGGCACGUGCAmiR164MIRNAShortStack
can-MIR164a-m1Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold1459:352039-352128+166,076233.10UGGAGAAGCAGGGCACGUGCAmiR164MIRNAQin_et_al_2014
can-b1.6r1-3962Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold1577:321577-321764+347,787488.15UCGGACCAGGCUUCAUUCCUCmiR166MIRNAShortStack
can-MIR166h-m1Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold1577:321581-321737+347,783488.15UCGGACCAGGCUUCAUUCCUCmiR166MIRNAQin_et_al_2014
can-b1.6r1-4263Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold1646:107016-107186+3980.56AAUUGCAUCUAUCCUAAGAUUMIRNAShortStack
can-MIR395a-m1Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold1783:28494-28574-490.07CUGAAGUGUUUGGGGGAACUCmiR395MIRNAQin_et_al_2014
can-MIR395j-m1Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold1783:28494-28574-490.07CUGAAGUGUUUGGGGGAACUCmiR395MIRNAQin_et_al_2014
can-MIRC13.1-m1Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold285:2639603-2639865-15,36221.56UGUAGUUGUAGCCAUUCUAUUMIRNAQin_et_al_2014
can-MIRC13.2-m1Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold285:2639603-2639865-15,36221.56UGUAGUUGUAGCCAUUCUAUUMIRNAQin_et_al_2014
can-b1.6r1-8527Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold588:1080834-1081121+140,873197.73UUGCAAACACACCUGAAUCGUMIRNAShortStack
can-b1.6r1-10137Capsicum annuum (Pepper) 1.6PGAv.1.6.scaffold960:438469-438595-2,8413.99UACUUUGGGUAUUCAUAUGCUMIRNAShortStack