| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| csi-MIR171i-m1 | Citrus sinensis (Sweet Orange) 2 | chr2:1312568-1312670 | + | 622 | 1.46 | UGAUUGAGCCGUGCCAAUAUC | miR171 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR399a-m1 | Citrus sinensis (Sweet Orange) 2 | chr2:2292704-2292858 | + | 233 | 0.55 | UGCCAAAGGAGAUUUGCCCGG | miR399 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR535e-m1 | Citrus sinensis (Sweet Orange) 2 | chr2:14821442-14821535 | - | 321 | 0.75 | UUGCUCUCUACCAUUGUCAUA | miR535 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR535f-m1 | Citrus sinensis (Sweet Orange) 2 | chr2:14821442-14821535 | - | 321 | 0.75 | UUGCUCUCUACCAUUGUCAUA | miR535 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR535e-m2 | Citrus sinensis (Sweet Orange) 2 | chr2:14823372-14823465 | - | 2,094 | 4.92 | UGACAAUGAGAGAGAGCACAC | miR535 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR535f-m2 | Citrus sinensis (Sweet Orange) 2 | chr2:14823372-14823465 | - | 2,094 | 4.92 | UGACAAUGAGAGAGAGCACAC | miR535 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR535a-m2 | Citrus sinensis (Sweet Orange) 2 | chr2:14823416-14823556 | - | 1,121 | 2.63 | UGACAAUGAGAGAGAGCACAC | miR535 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR171a-m1 | Citrus sinensis (Sweet Orange) 2 | chr2:18394861-18394956 | + | 1,987 | 4.67 | UGAUUGAGCCGUGCCAAUAUC | miR171 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR3949-m1 | Citrus sinensis (Sweet Orange) 2 | chr3:26422796-26422919 | - | 7 | 0.02 | CACCCGAAGGAUGUUAUGGCC | | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR482d-m1 | Citrus sinensis (Sweet Orange) 2 | chr6:1186339-1186511 | + | 710,412 | 1,668.62 | UGGUAUGGGUGAGUAGGGAAG | miR482 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR169f-m1 | Citrus sinensis (Sweet Orange) 2 | chr6:14259723-14259895 | - | 253 | 0.59 | GCAAGUCGUCUUUGGCUAUUU | miR169 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR169g-m1 | Citrus sinensis (Sweet Orange) 2 | chr7:1615803-1616008 | - | 1,590 | 3.74 | CAGCCAAGGAUGACUUGCCGG | miR169 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR3953-m1 | Citrus sinensis (Sweet Orange) 2 | chr7:20080873-20080973 | . | 7,732 | 18.16 | UUGAGUUCUGCAAGCCGUCGA | miR3953 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR3950-m1 | Citrus sinensis (Sweet Orange) 2 | chr7:20087837-20087988 | + | 4,222 | 9.92 | AGAAAACGGGACAAGAAGCUU | | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR3950-m2 | Citrus sinensis (Sweet Orange) 2 | chr7:20097961-20098112 | . | 5,942 | 13.96 | AGAAAACGGGACAAGAAGCUU | | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR3954-m1 | Citrus sinensis (Sweet Orange) 2 | chr7:20107879-20107965 | - | 70,536 | 165.68 | UGGACAGAGAAAUCACGGUCA | miR3954 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR3952-m1 | Citrus sinensis (Sweet Orange) 2 | chr8:16164233-16164395 | + | 27,445 | 64.46 | GCUGUAGAUAGGCCCUUCAAC | miR3952 | siRNA21 | miRBase22-BestBlastHit |
| csi-MIR827-m1 | Citrus sinensis (Sweet Orange) 2 | chrUn:38140536-38140635 | + | 88,170 | 207.09 | UGCUUGUUGAUUGUCAUCUAA | | siRNA21 | miRBase22-BestBlastHit |
Data from Lunardon et al. (2020)