het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Carica papaya (Papaya) genome build 0.4 (cpa-b0.4)

Version v0.4 of Carica papaya cv. SunUp from Phytozome

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
cpa-MIR395c-m1Carica papaya (Papaya) 0.4supercontig_183:234094-234161-110.19CUGAAGUGUUUGGGGGAACUCmiR395OtherRNAmiRBase21-BestBlastHit
cpa-MIR159b-m1Carica papaya (Papaya) 0.4supercontig_184:39571-39747-1,25121.95CUUGGAUUGAAGGGAGCUCCmiR159OtherRNAmiRBase21-BestBlastHit
cpa-MIR8155-m1Carica papaya (Papaya) 0.4supercontig_31:780915-780980+270.47UAACCUGGCUCUGAUACCAmiR8155OtherRNAmiRBase21-BestBlastHit
cpa-MIR8153-m1Carica papaya (Papaya) 0.4supercontig_6:1815699-1815793.50.09UGUUUUCGGGGAGCUGAAAmiR8153OtherRNAmiRBase21-BestBlastHit