het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Brassica oleracea var. capitata (Cabbage) genome build 1.0 (bol-b1.0)

Version v1.0 of Brassica oleracea var. capitata cv. 02-12 from Phytozome

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
bol-MIR9408-m1Brassica oleracea var. capitata (Cabbage) 1.0C01:13293228-13293358-1011.35UUUCAUCUUAGAGAAUGUUGUCmiR9408nearMIRNAmiRBase21-BestBlastHit
bol-MIR157a-m1Brassica oleracea var. capitata (Cabbage) 1.0C01:31679982-31680111+522,6857,000.31UUGACAGAAGAUAGAGAGCACmiR156nearMIRNAmiRBase21-BestBlastHit
bol-MIR172a-m1Brassica oleracea var. capitata (Cabbage) 1.0C02:1546883-1547000-1081.45AGAAUCUUGAUGAUGCUGCAUmiR172nearMIRNAmiRBase21-BestBlastHit