het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Brassica napus (Rapeseed) genome build 1 (bna-b1)

Version v1 of Brassica napus cv. Darmor-bzh from Ensembl Plants

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
bna-MIR6031-m1Brassica napus (Rapeseed) 1LK031864:325554-325624.570.20GCAGCUUUUGCGAUUGGUAGCGGUsiRNA24miRBase21-BestBlastHit
bna-MIR6031-m2Brassica napus (Rapeseed) 1LK031871:1270517-1270587+330.11UUUUGAAUUUAAGAGGUUCGGAGCsiRNA24miRBase21-BestBlastHit
bna-MIR6031-m3Brassica napus (Rapeseed) 1LK031898:413404-413474.50.02AUACAAACCGCUAUAAAUCGCUUCmiR6031siRNA24miRBase21-BestBlastHit
bna-MIR6031-m4Brassica napus (Rapeseed) 1LK032078:86858-86928+270.09UUUUGAAUUUAAGAGGUUCGGAGCsiRNA24miRBase21-BestBlastHit
bna-MIR6036-m1Brassica napus (Rapeseed) 1LK032165:93009-93163.200.07AGGCUAACUGAGACUAGUGAGUUAsiRNA24miRBase21-BestBlastHit
bna-MIR156a-m1Brassica napus (Rapeseed) 1LK033206:72514-72595.60.02CAUAGCAACUGACAGAAGAGAGUGAGCACmiR156siRNA24miRBase21-BestBlastHit
bna-MIR6031-m5Brassica napus (Rapeseed) 1LK045481:2342-2412-280.10UGAAUUUAAGAGGUUCGGAGCGGUsiRNA24miRBase21-BestBlastHit