het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Solanum tuberosum (Potato) genome build 4.04 (stu-b4.04)

Version v4.04 of Solanum tuberosum cv. DM1-3 516 R44 from Spud DB

Locus type

Annotation source

Name contains:

Family contains:


NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
stu-MIR8005c-m1Solanum tuberosum (Potato) 4.04chr00:11644370-1164456700.00NotExpressedmiRBase21-BestBlastHit
stu-MIR395h-m1Solanum tuberosum (Potato) 4.04chr00:35459516-3545958700.00NotExpressedmiRBase21-BestBlastHit
stu-MIR395i-m1Solanum tuberosum (Potato) 4.04chr00:35459516-3545958700.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m5Solanum tuberosum (Potato) 4.04chr00:38111925-3811197100.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m5Solanum tuberosum (Potato) 4.04chr00:38111925-3811197100.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m6Solanum tuberosum (Potato) 4.04chr00:39013516-3901356200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m6Solanum tuberosum (Potato) 4.04chr00:39013516-3901356200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7982a-m1Solanum tuberosum (Potato) 4.04chr01:8880523-888061000.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7982b-m1Solanum tuberosum (Potato) 4.04chr01:8880523-888061000.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886a-m3Solanum tuberosum (Potato) 4.04chr02:317749-31781800.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886b-m3Solanum tuberosum (Potato) 4.04chr02:317749-31781800.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886c-m3Solanum tuberosum (Potato) 4.04chr02:317749-31781800.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886d-m3Solanum tuberosum (Potato) 4.04chr02:317749-31781800.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886e-m3Solanum tuberosum (Potato) 4.04chr02:317749-31781800.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886f-m3Solanum tuberosum (Potato) 4.04chr02:317749-31781800.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m13Solanum tuberosum (Potato) 4.04chr03:49798757-4979880300.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m13Solanum tuberosum (Potato) 4.04chr03:49798757-4979880300.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m15Solanum tuberosum (Potato) 4.04chr05:33888803-3388884900.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m15Solanum tuberosum (Potato) 4.04chr05:33888803-3388884900.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7996a-m2Solanum tuberosum (Potato) 4.04chr05:45509946-4551013500.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7996c-m2Solanum tuberosum (Potato) 4.04chr05:45509946-4551013500.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7996b-m2Solanum tuberosum (Potato) 4.04chr06:38228628-3822881700.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m17Solanum tuberosum (Potato) 4.04chr07:15802909-1580295500.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m17Solanum tuberosum (Potato) 4.04chr07:15802909-1580295500.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7987-m1Solanum tuberosum (Potato) 4.04chr07:20618018-2061807400.00NotExpressedmiRBase21-BestBlastHit
stu-MIR8001a-m1Solanum tuberosum (Potato) 4.04chr07:20822830-2082290000.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886a-m11Solanum tuberosum (Potato) 4.04chr08:11862673-1186274200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886b-m11Solanum tuberosum (Potato) 4.04chr08:11862673-1186274200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886c-m11Solanum tuberosum (Potato) 4.04chr08:11862673-1186274200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886d-m11Solanum tuberosum (Potato) 4.04chr08:11862673-1186274200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886e-m11Solanum tuberosum (Potato) 4.04chr08:11862673-1186274200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR1886f-m11Solanum tuberosum (Potato) 4.04chr08:11862673-1186274200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR8037-m1Solanum tuberosum (Potato) 4.04chr08:14268862-1426893500.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m19Solanum tuberosum (Potato) 4.04chr08:15159465-1515951100.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m19Solanum tuberosum (Potato) 4.04chr08:15159465-1515951100.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m20Solanum tuberosum (Potato) 4.04chr08:23324924-2332497000.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m20Solanum tuberosum (Potato) 4.04chr08:23324924-2332497000.00NotExpressedmiRBase21-BestBlastHit
stu-MIR8032a-m2Solanum tuberosum (Potato) 4.04chr10:9584240-958428700.00NotExpressedmiRBase21-BestBlastHit
stu-MIR8032e-m2Solanum tuberosum (Potato) 4.04chr10:9584240-958428700.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7982a-m4Solanum tuberosum (Potato) 4.04chr11:34235098-3423518500.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7982b-m4Solanum tuberosum (Potato) 4.04chr11:34235098-3423518500.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m21Solanum tuberosum (Potato) 4.04chr12:8626399-862644500.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m21Solanum tuberosum (Potato) 4.04chr12:8626399-862644500.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m22Solanum tuberosum (Potato) 4.04chr12:8626536-862658200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m22Solanum tuberosum (Potato) 4.04chr12:8626536-862658200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m23Solanum tuberosum (Potato) 4.04chr12:8626958-862700400.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m23Solanum tuberosum (Potato) 4.04chr12:8626958-862700400.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m24Solanum tuberosum (Potato) 4.04chr12:8627144-862719000.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m24Solanum tuberosum (Potato) 4.04chr12:8627144-862719000.00NotExpressedmiRBase21-BestBlastHit
stu-MIR8032a-m3Solanum tuberosum (Potato) 4.04chr12:52448973-5244902000.00NotExpressedmiRBase21-BestBlastHit
stu-MIR8032e-m3Solanum tuberosum (Potato) 4.04chr12:52448973-5244902000.00NotExpressedmiRBase21-BestBlastHit
stu-MIR395d-m5Solanum tuberosum (Potato) 4.04chr12:55045845-5504591600.00NotExpressedmiRBase21-BestBlastHit
stu-MIR395j-m5Solanum tuberosum (Potato) 4.04chr12:55045845-5504591600.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m3Solanum tuberosum (Potato) 4.04ChrUn:41612946-4161299200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m3Solanum tuberosum (Potato) 4.04ChrUn:41612946-4161299200.00NotExpressedmiRBase21-BestBlastHit
stu-MIR395d-m1Solanum tuberosum (Potato) 4.04ChrUn:61801656-6180172700.00NotExpressedmiRBase21-BestBlastHit
stu-MIR395j-m1Solanum tuberosum (Potato) 4.04ChrUn:61801656-6180172700.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991a-m4Solanum tuberosum (Potato) 4.04ChrUn:75702413-7570245900.00NotExpressedmiRBase21-BestBlastHit
stu-MIR7991b-m4Solanum tuberosum (Potato) 4.04ChrUn:75702413-7570245900.00NotExpressedmiRBase21-BestBlastHit
stu-MIR395d-m2Solanum tuberosum (Potato) 4.04ChrUn:99996950-9999702100.00NotExpressedmiRBase21-BestBlastHit
stu-MIR395j-m2Solanum tuberosum (Potato) 4.04ChrUn:99996950-9999702100.00NotExpressedmiRBase21-BestBlastHit