Data from Lunardon et al. (2020)

Annotations viewer

Genome

Amborella trichopoda (Amborella) genome build 1 (atr-b1)

Version 1.0 genome from Amborella.org along with plastid and mitochondrial genomes

Locus type

Annotation source

Name contains:

Family contains:

Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
mb21_atr-MIR8570	Amborella trichopoda (Amborella) 1	AmTr_v1.0_scaffold00002:9634329-9634811	-	1,198	25.50	AGUUGGGAGUGCGUCAUUGACUAG	miR8570	OtherRNA	miRBase21
mb21_atr-MIR8552a	Amborella trichopoda (Amborella) 1	AmTr_v1.0_scaffold00007:8707919-8708369	+	72	1.53	UAGAUUGAAUCUGGAUUGAUCUGAC	miR8552	OtherRNA	miRBase21
mb21_atr-MIR396a	Amborella trichopoda (Amborella) 1	AmTr_v1.0_scaffold00013:1544499-1544667	+	4	0.09	UUCUUGAACAUGCUGCUCAAA	miR396	OtherRNA	miRBase21
mb21_atr-MIR8563	Amborella trichopoda (Amborella) 1	AmTr_v1.0_scaffold00021:1174892-1175342	-	2,396	51.00	CUCCAUACUCUAAACUGUUAGAAU		OtherRNA	miRBase21
mb21_atr-MIR8571	Amborella trichopoda (Amborella) 1	AmTr_v1.0_scaffold00025:4427106-4427691	+	917	19.52	UUCAAUCGUCAAGUAUCCAUGCCU	miR8571	OtherRNA	miRBase21
mb21_atr-MIR8574	Amborella trichopoda (Amborella) 1	AmTr_v1.0_scaffold00029:3795409-3795750	-	132	2.81	ACAUCUUAUGAGUAAGAGUGAUUG	miR8574	OtherRNA	miRBase21
mb21_atr-MIR8577	Amborella trichopoda (Amborella) 1	AmTr_v1.0_scaffold00033:798979-799089	-	613	13.05	AAAAGGCUCAGAUGAUGAUGAUGA	miR8577	OtherRNA	miRBase21
mb21_atr-MIR8589	Amborella trichopoda (Amborella) 1	AmTr_v1.0_scaffold00055:2362010-2362193	-	101	2.15	AGGACCACGAUUUUUCGGCCACGG	miR8589	OtherRNA	miRBase21
mb21_atr-MIR2950	Amborella trichopoda (Amborella) 1	AmTr_v1.0_scaffold00059:4206332-4206411	-	2,319	49.36	UUCCAUCUCUUGCACAC	miR2950	OtherRNA	miRBase21