het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Physcomitrella patens (Spreading Earthmoss) genome build 3.0 (ppt-b3.0)

Version 3.0 genome build from Phytozome 10 along with plastid and mitochondrial genomes

Locus type

Annotation source

Name contains:

Family contains:

NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
ppt-MIR536ePhyscomitrella patens (Spreading Earthmoss) 3.0Chr23:1247525-1247988+47,277324.21UCGUGCCAAGCUGUGUGCAACCmiR536siRNA22miRBase21
ppt-MIR536bPhyscomitrella patens (Spreading Earthmoss) 3.0Chr23:2550169-2550390-134,826924.58UCGUGCCAAGCUGUGUGCAACCmiR536siRNA22miRBase21
ppt-MIR536dPhyscomitrella patens (Spreading Earthmoss) 3.0Chr24:5312887-5313329+41,415284.01UCGUGCCAAGCUGUGUGCAACCmiR536siRNA22miRBase21