| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| bdi-b1.0r1-104 | Brachypodium distachyon (Stiff brome) 1.0 | 1:377752-377842 | + | 241 | 0.69 | UCUGUCCUGUAAUAUAAGAUG | | MIRNA | ShortStack |
| bdi-b1.0r1-259 | Brachypodium distachyon (Stiff brome) 1.0 | 1:1175429-1175570 | + | 7,248 | 20.70 | UGGGCAAGUCAGCCUGGCUACC | miR169 | MIRNA | ShortStack |
| bdi-b1.0r1-841 | Brachypodium distachyon (Stiff brome) 1.0 | 1:3770021-3770162 | + | 16,162 | 46.17 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | ShortStack |
| bdi-b1.0r1-1068 | Brachypodium distachyon (Stiff brome) 1.0 | 1:4550728-4550902 | - | 15,653 | 44.71 | UGCCUGGCUCCCUGUAUGCCA | miR160 | MIRNA | ShortStack |
| bdi-b1.0r1-1505 | Brachypodium distachyon (Stiff brome) 1.0 | 1:6349052-6349168 | + | 36,826 | 105.19 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | ShortStack |
| bdi-b1.0r1-1556 | Brachypodium distachyon (Stiff brome) 1.0 | 1:6574391-6574498 | + | 169,518 | 484.22 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| bdi-b1.0r1-1641 | Brachypodium distachyon (Stiff brome) 1.0 | 1:6911164-6911269 | + | 1,371 | 3.92 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | ShortStack |
| bdi-b1.0r1-4043 | Brachypodium distachyon (Stiff brome) 1.0 | 1:16730024-16730147 | - | 4,997 | 14.27 | UUUGAAAAUUGAACUAGAAGC | miR5185 | MIRNA | ShortStack |
| bdi-b1.0r1-4583 | Brachypodium distachyon (Stiff brome) 1.0 | 1:18961249-18961367 | + | 25,978 | 74.21 | UUCAGGAGAGAUGACACCGACA | miR1432 | MIRNA | ShortStack |
| bdi-b1.0r1-5005 | Brachypodium distachyon (Stiff brome) 1.0 | 1:20621584-20621699 | - | 3,160 | 9.03 | AUUGCUCUGAUACCAUGUGGGAGA | | MIRNA | ShortStack |
| bdi-b1.0r1-6639 | Brachypodium distachyon (Stiff brome) 1.0 | 1:27159078-27159314 | - | 30,510 | 87.15 | UAGCCAAGGAUGACUUGCCG | miR169 | MIRNA | ShortStack |
| bdi-b1.0r1-6861 | Brachypodium distachyon (Stiff brome) 1.0 | 1:28020438-28020629 | - | 2,544 | 7.27 | GCGUGCAAGGAGCCAAGCAUG | miR160 | MIRNA | ShortStack |
| bdi-b1.0r1-6956 | Brachypodium distachyon (Stiff brome) 1.0 | 1:28306106-28306338 | - | 6,536 | 18.67 | UGUGAUGAUGUGGCAUAGAAU | miR5176 | MIRNA | ShortStack |
| bdi-b1.0r1-7463 | Brachypodium distachyon (Stiff brome) 1.0 | 1:30313520-30313799 | - | 1,169 | 3.34 | UUUGACCGAGUUUAUAGAAAA | miR437 | MIRNA | ShortStack |
| bdi-b1.0r1-7545 | Brachypodium distachyon (Stiff brome) 1.0 | 1:30655645-30655921 | - | 20,269 | 57.90 | GGAAUGUUGUCUGGCUCGGGG | miR166 | MIRNA | ShortStack |
| bdi-b1.0r1-9377 | Brachypodium distachyon (Stiff brome) 1.0 | 1:39792978-39793160 | + | 45,329 | 129.48 | UUUUAAUUGUGGAAGCUCUUG | miR7741 | MIRNA | ShortStack |
| bdi-b1.0r1-10791 | Brachypodium distachyon (Stiff brome) 1.0 | 1:45439013-45439124 | - | 334 | 0.95 | UCUCCGUUUCGAAUUAACUGA | | MIRNA | ShortStack |
| bdi-b1.0r1-11110 | Brachypodium distachyon (Stiff brome) 1.0 | 1:46677020-46677131 | - | 1,706 | 4.87 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | ShortStack |
| bdi-b1.0r1-11292 | Brachypodium distachyon (Stiff brome) 1.0 | 1:47454210-47454317 | + | 3,335 | 9.53 | UGUAGAUACUCCCUAAGGCUU | miR5200 | MIRNA | ShortStack |
| bdi-b1.0r1-12218 | Brachypodium distachyon (Stiff brome) 1.0 | 1:50986558-50986786 | - | 42,343 | 120.95 | UUUGGAGAUUGACUUAGAAGC | miR5185 | MIRNA | ShortStack |
| bdi-b1.0r1-13275 | Brachypodium distachyon (Stiff brome) 1.0 | 1:55108464-55108695 | - | 3,800 | 10.86 | GAGGGCCAAGGUAGUUGUUUCACA | miR7723 | MIRNA | ShortStack |
| bdi-b1.0r1-15495 | Brachypodium distachyon (Stiff brome) 1.0 | 1:63715721-63715956 | - | 1,848 | 5.28 | CGACACUUACUGUGGCUCGGA | miR5181 | MIRNA | ShortStack |
| bdi-b1.0r1-15797 | Brachypodium distachyon (Stiff brome) 1.0 | 1:64869279-64869359 | - | 6,261 | 17.88 | UUUUUCCUUCGGCUGACACGUA | miR7773 | MIRNA | ShortStack |
| bdi-b1.0r1-17295 | Brachypodium distachyon (Stiff brome) 1.0 | 1:71419405-71419512 | - | 74,896 | 213.94 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| bdi-b1.0r1-17336 | Brachypodium distachyon (Stiff brome) 1.0 | 1:71590952-71591087 | - | 325,817 | 930.69 | UGAAGCUGCCAGCAUGAUCUGA | miR167 | MIRNA | ShortStack |
| bdi-b1.0r1-17587 | Brachypodium distachyon (Stiff brome) 1.0 | 1:72765318-72765479 | - | 90,766 | 259.27 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | ShortStack |
| bdi-b1.0r1-17662 | Brachypodium distachyon (Stiff brome) 1.0 | 1:73059477-73059695 | - | 867,922 | 2,479.20 | UGGAAGGGGCAUGCAGAGGAG | miR528 | MIRNA | ShortStack |
| bdi-b1.0r1-18966 | Brachypodium distachyon (Stiff brome) 1.0 | 2:4030923-4031015 | + | 43,873 | 125.32 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| bdi-b1.0r1-19940 | Brachypodium distachyon (Stiff brome) 1.0 | 2:7704095-7704337 | + | 49,764 | 142.15 | CAGCCAAGGAUGACUUGCCGA | miR169 | MIRNA | ShortStack |
| bdi-b1.0r1-20433 | Brachypodium distachyon (Stiff brome) 1.0 | 2:9542407-9542570 | + | 10,471 | 29.91 | GAUGCUCGCCGGAGCAGCGUGCUG | miR531 | MIRNA | ShortStack |
| bdi-b1.0r1-20528 | Brachypodium distachyon (Stiff brome) 1.0 | 2:9800184-9800268 | + | 1,121 | 3.20 | UGCUCGGAUUGAGUGUAUUUU | miR7728 | MIRNA | ShortStack |
| bdi-b1.0r1-23007 | Brachypodium distachyon (Stiff brome) 1.0 | 2:19949305-19949528 | - | 107,947 | 308.35 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | ShortStack |
| bdi-b1.0r1-23759 | Brachypodium distachyon (Stiff brome) 1.0 | 2:22827671-22827753 | - | 847 | 2.42 | ACUUCUUAUGGAUUGUAGGGA | miR5181 | MIRNA | ShortStack |
| bdi-b1.0r1-25378 | Brachypodium distachyon (Stiff brome) 1.0 | 2:31725030-31725130 | - | 1,327 | 3.79 | AUAAAUGGAUUGGUUGUUUGUAG | | MIRNA | ShortStack |
| bdi-b1.0r1-28109 | Brachypodium distachyon (Stiff brome) 1.0 | 2:43034390-43034528 | - | 1,337 | 3.82 | UAGUGCAGGGAGAAGUCGGUC | miR9484 | MIRNA | ShortStack |
| bdi-b1.0r1-28866 | Brachypodium distachyon (Stiff brome) 1.0 | 2:45992397-45992571 | - | 18,047 | 51.55 | UUGGACUGAAGGGUGCUCCCU | miR319 | MIRNA | ShortStack |
| bdi-b1.0r1-29753 | Brachypodium distachyon (Stiff brome) 1.0 | 2:49503492-49503571 | - | 235 | 0.67 | UCAGCUCCACGGACUUGGUGA | miR9489 | MIRNA | ShortStack |
| bdi-b1.0r1-30116 | Brachypodium distachyon (Stiff brome) 1.0 | 2:51090477-51090732 | - | 9,303 | 26.57 | UGAUGAUCUUGGAACACGUGC | miR5182 | MIRNA | ShortStack |
| bdi-b1.0r1-32330 | Brachypodium distachyon (Stiff brome) 1.0 | 3:1774715-1774895 | - | 9,978,845 | 28,504.32 | UCGCUUGGUGCAGAUCGGGAC | miR168 | MIRNA | ShortStack |
| bdi-b1.0r1-33650 | Brachypodium distachyon (Stiff brome) 1.0 | 3:6980874-6981019 | + | 11,326 | 32.35 | GAUCGAGAUCGUGGAGGAACC | miR7732 | MIRNA | ShortStack |
| bdi-b1.0r1-33694 | Brachypodium distachyon (Stiff brome) 1.0 | 3:7132941-7133040 | - | 896 | 2.56 | UGCCAAAGGAGAUUUGCCCGG | miR399 | MIRNA | ShortStack |
| bdi-b1.0r1-33872 | Brachypodium distachyon (Stiff brome) 1.0 | 3:7679242-7679321 | - | 312 | 0.89 | UGAAAAAUGCCUCUGGACGUG | miR9495 | MIRNA | ShortStack |
| bdi-b1.0r1-34546 | Brachypodium distachyon (Stiff brome) 1.0 | 3:10710366-10710540 | - | 537 | 1.53 | UAAGUGAUUAGAGGUUCCAGU | miR9486 | MIRNA | ShortStack |
| bdi-b1.0r1-34656 | Brachypodium distachyon (Stiff brome) 1.0 | 3:11656558-11656630 | + | 327 | 0.93 | UCUUAUAAAUAGGAACGGAGG | miR5281 | MIRNA | ShortStack |
| bdi-b1.0r1-34877 | Brachypodium distachyon (Stiff brome) 1.0 | 3:12734307-12734415 | + | 1,782 | 5.09 | UGCCUGGCUCCCUGUAUGCCA | miR160 | MIRNA | ShortStack |
| bdi-b1.0r1-34893 | Brachypodium distachyon (Stiff brome) 1.0 | 3:12800567-12800651 | - | 442 | 1.26 | UUGAUAAGAUGCCAUGCCUUG | | MIRNA | ShortStack |
| bdi-b1.0r1-35935 | Brachypodium distachyon (Stiff brome) 1.0 | 3:16738809-16738947 | + | 3,992 | 11.40 | CAGCCAAGGAUGACUUGCCGG | miR169 | MIRNA | ShortStack |
| bdi-b1.0r1-36098 | Brachypodium distachyon (Stiff brome) 1.0 | 3:17344080-17344241 | - | 438 | 1.25 | UGCUAGAGCACCAGUGGCAGUGAU | | MIRNA | ShortStack |
| bdi-b1.0r1-38057 | Brachypodium distachyon (Stiff brome) 1.0 | 3:27457703-27457806 | - | 2,684 | 7.67 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| bdi-b1.0r1-39500 | Brachypodium distachyon (Stiff brome) 1.0 | 3:33098704-33098934 | + | 213,160 | 608.89 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| bdi-b1.0r1-41026 | Brachypodium distachyon (Stiff brome) 1.0 | 3:39258140-39258288 | - | 9,630 | 27.51 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| bdi-b1.0r1-41609 | Brachypodium distachyon (Stiff brome) 1.0 | 3:41554306-41554401 | + | 12,991 | 37.11 | UGCCUGGCUCCCUGAAUGCCA | miR160 | MIRNA | ShortStack |
| bdi-b1.0r1-42056 | Brachypodium distachyon (Stiff brome) 1.0 | 3:43441533-43441659 | + | 2,495 | 7.13 | UAGCCAAGGAUGACUUGCCUG | miR169 | MIRNA | ShortStack |
| bdi-b1.0r1-42058 | Brachypodium distachyon (Stiff brome) 1.0 | 3:43444517-43444658 | + | 5,596 | 15.99 | UAGCCAAGGAUGACUUGCCUG | miR169 | MIRNA | ShortStack |
| bdi-b1.0r1-42078 | Brachypodium distachyon (Stiff brome) 1.0 | 3:43543086-43543316 | - | 5,917 | 16.90 | CGGAGUACUUUGAGCGAGAGG | | MIRNA | ShortStack |
| bdi-b1.0r1-42376 | Brachypodium distachyon (Stiff brome) 1.0 | 3:44898517-44898599 | + | 14,346 | 40.98 | AGAAGAGAGAGAGUACAGCCU | miR529 | MIRNA | ShortStack |
| bdi-b1.0r1-43000 | Brachypodium distachyon (Stiff brome) 1.0 | 3:47406356-47406435 | - | 25,451 | 72.70 | GUGCUUGACAGACGACUCUGG | miR7738 | MIRNA | ShortStack |
| bdi-b1.0r1-43670 | Brachypodium distachyon (Stiff brome) 1.0 | 3:49973606-49973695 | - | 72,914 | 208.28 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| bdi-b1.0r1-44031 | Brachypodium distachyon (Stiff brome) 1.0 | 3:51437895-51438018 | + | 78,273 | 223.59 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| bdi-b1.0r1-44234 | Brachypodium distachyon (Stiff brome) 1.0 | 3:52192133-52192211 | + | 406 | 1.16 | UCUGUUCCUAGAUAUAAGACG | | MIRNA | ShortStack |
| bdi-b1.0r1-44272 | Brachypodium distachyon (Stiff brome) 1.0 | 3:52316400-52316579 | - | 5,465 | 15.61 | UUGGCAUUCUGUCCACCUCC | miR394 | MIRNA | ShortStack |
| bdi-b1.0r1-44870 | Brachypodium distachyon (Stiff brome) 1.0 | 3:54962844-54963066 | + | 58,657 | 167.55 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | ShortStack |
| bdi-b1.0r1-44873 | Brachypodium distachyon (Stiff brome) 1.0 | 3:54968154-54968269 | - | 645 | 1.84 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | ShortStack |
| bdi-b1.0r1-45064 | Brachypodium distachyon (Stiff brome) 1.0 | 3:55737252-55737443 | - | 428,877 | 1,225.08 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | ShortStack |
| bdi-b1.0r1-45437 | Brachypodium distachyon (Stiff brome) 1.0 | 3:57427344-57427465 | + | 26,435 | 75.51 | UCGGACCAGGCUUCAAUCCCU | miR166 | MIRNA | ShortStack |
| bdi-b1.0r1-45816 | Brachypodium distachyon (Stiff brome) 1.0 | 3:59349809-59349966 | - | 184,665 | 527.49 | UCCACAGGCUUUCUUGAACUG | miR396 | MIRNA | ShortStack |
| bdi-b1.0r1-46286 | Brachypodium distachyon (Stiff brome) 1.0 | 4:1641410-1641554 | - | 123,529 | 352.86 | UGAAGCUGCCAGCAUGAUCUGA | miR167 | MIRNA | ShortStack |
| bdi-b1.0r1-47489 | Brachypodium distachyon (Stiff brome) 1.0 | 4:6090837-6090989 | - | 66,510 | 189.98 | UCUCGGACCAGGCUUCAUUCC | miR166 | MIRNA | ShortStack |
| bdi-b1.0r1-49000 | Brachypodium distachyon (Stiff brome) 1.0 | 4:11947794-11948046 | - | 34,077 | 97.34 | UUAGGUAUUUCAGGUUAGGUG | miR5163 | MIRNA | ShortStack |
| bdi-b1.0r1-50154 | Brachypodium distachyon (Stiff brome) 1.0 | 4:16374462-16374587 | + | 395 | 1.13 | UGAAGUGUUUGGGGGAACUC | miR395 | MIRNA | ShortStack |
| bdi-b1.0r1-50330 | Brachypodium distachyon (Stiff brome) 1.0 | 4:17265166-17265285 | - | 546 | 1.56 | CCCUCGUCGACGCGGCAGCUC | miR9499 | MIRNA | ShortStack |
| bdi-b1.0r1-52448 | Brachypodium distachyon (Stiff brome) 1.0 | 4:28103105-28103199 | - | 3,479 | 9.94 | UUCAUGGAUCAGAGGGAGUAG | | MIRNA | ShortStack |
| bdi-b1.0r1-52661 | Brachypodium distachyon (Stiff brome) 1.0 | 4:28926554-28926694 | - | 8,124 | 23.21 | CGCGCGUCGCUGUCAAGGGG | | MIRNA | ShortStack |
| bdi-b1.0r1-54457 | Brachypodium distachyon (Stiff brome) 1.0 | 4:36168967-36169106 | + | 58,339 | 166.64 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| bdi-b1.0r1-54770 | Brachypodium distachyon (Stiff brome) 1.0 | 4:37301940-37302089 | + | 1,504 | 4.30 | AUUUGUAGUGUUCAGAUUGAGUUU | miR1878 | MIRNA | ShortStack |
| bdi-b1.0r1-54859 | Brachypodium distachyon (Stiff brome) 1.0 | 4:37627845-37628039 | + | 182,449 | 521.16 | UGUGGUGAUCUCGGACCAGGC | miR166 | MIRNA | ShortStack |
| bdi-b1.0r1-55439 | Brachypodium distachyon (Stiff brome) 1.0 | 4:39946830-39946974 | + | 1,590 | 4.54 | UCGAAACUUUGUCUGAAUACG | | MIRNA | ShortStack |
| bdi-b1.0r1-56617 | Brachypodium distachyon (Stiff brome) 1.0 | 4:44509037-44509182 | + | 11,296 | 32.27 | AUGGAUGAGAUGUGAUUGUAUG | miR169 | MIRNA | ShortStack |
| bdi-b1.0r1-56619 | Brachypodium distachyon (Stiff brome) 1.0 | 4:44513759-44513928 | + | 5,855 | 16.73 | UGGUCAAGCCUUCCUGACUAGG | miR169 | MIRNA | ShortStack |
| bdi-b1.0r1-61485 | Brachypodium distachyon (Stiff brome) 1.0 | 5:18037508-18037614 | - | 16,733 | 47.80 | UUAGAUGACCAUCAGCAAACA | miR827 | MIRNA | ShortStack |
| bdi-b1.0r1-61529 | Brachypodium distachyon (Stiff brome) 1.0 | 5:18202211-18202372 | - | 110,392 | 315.33 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| bdi-b1.0r1-63661 | Brachypodium distachyon (Stiff brome) 1.0 | 5:27112440-27112623 | + | 25,830 | 73.78 | UCCACAGGCUUUCUUGAACUG | miR396 | MIRNA | ShortStack |
| bdi-b1.0r1-63762 | Brachypodium distachyon (Stiff brome) 1.0 | 5:27613828-27614040 | + | 27,135 | 77.51 | UCCAAAGGGAUCGCAUUGAUC | miR393 | MIRNA | ShortStack |
Data from Lunardon et al. (2020)