Data from Lunardon et al. (2020)

Annotations viewer

Genome

Picea abies (Norway Spruce) genome build 1.0c (pab-b1.0c)

Version 1.0 Picea abies assembly collapsed for STAR

Locus type

Annotation source

Name contains:

Family contains:

Name	Genome	Coordinates	Strand	Reads	RPM	Major RNA	Family	Locus Type	Annotation Source
pab-b1.0cr1-15313	Picea abies (Norway Spruce) 1.0c	Combined_03:242952045-242952362	.	951	2.18	UUUGUCCAACGUAAACGGCA	miR11582	siRNA20	ShortStack
pab-b1.0cr1-15410	Picea abies (Norway Spruce) 1.0c	Combined_03:497552028-497552049	+	235	0.54	UUAUGAAAAUAUCGGAAUCA		siRNA20	ShortStack
pab-b1.0cr1-15868	Picea abies (Norway Spruce) 1.0c	Combined_05:442058013-442058477	+	2,966	6.78	UAUUGGAUUGAGAAUAGAUC	miR11502	siRNA20	ShortStack
pab-b1.0cr1-15986	Picea abies (Norway Spruce) 1.0c	Combined_06:159030940-159031309	+	57,449	131.38	UCUGAAAUGUCGAUAAAACU		siRNA20	ShortStack
pab-b1.0cr1-15987	Picea abies (Norway Spruce) 1.0c	Combined_06:159031539-159031716	+	2,326	5.32	UCUGAAAUGUCGAUAAAACU		siRNA20	ShortStack
pab-b1.0cr1-16059	Picea abies (Norway Spruce) 1.0c	Combined_06:285345114-285345177	-	506	1.16	UUAGGAUGGGAAUACUCAAU		siRNA20	ShortStack
pab-b1.0cr1-16516	Picea abies (Norway Spruce) 1.0c	Combined_08:40570144-40570453	-	518	1.19	UAAAAACUGCUAGAUUUCCU		siRNA20	ShortStack
pab-b1.0cr1-16734	Picea abies (Norway Spruce) 1.0c	Combined_08:341235550-341235580	-	691	1.58	AUACCCGGACUGAUUACCUC		siRNA20	ShortStack
pab-b1.0cr1-16895	Picea abies (Norway Spruce) 1.0c	Combined_09:17287891-17287946	-	962	2.20	UCACAAGAUUCUUCCCGACU		siRNA20	ShortStack
pab-b1.0cr1-14153	Picea abies (Norway Spruce) 1.0c	MA_10430938:1880-1917	-	474	1.08	CGUGCUCUCUUGUUGUCACC	miR535	siRNA20	ShortStack
pab-b1.0cr1-4048	Picea abies (Norway Spruce) 1.0c	MA_10435645:346-366	-	536	1.23	UCUCUUCCUUGGCUUUACUC		siRNA20	ShortStack
pab-b1.0cr1-13156	Picea abies (Norway Spruce) 1.0c	MA_10436244:4151-4238	-	758	1.73	UGAGAAUUAUCAUCUGUAUC		siRNA20	ShortStack
pab-b1.0cr1-14413	Picea abies (Norway Spruce) 1.0c	MA_216327:2334-3217	-	86,813	198.53	CAACGAGGACAAACAGGAUC		siRNA20	ShortStack
pab-b1.0cr1-8517	Picea abies (Norway Spruce) 1.0c	MA_3160:4874-5591	+	993	2.27	CACCGAAGGUCUGAAGGACU		siRNA20	ShortStack
pab-b1.0cr1-9797	Picea abies (Norway Spruce) 1.0c	MA_50216:9545-9729	+	362	0.83	UGACAGAAGAUAGAGAGCAC	miR156	siRNA20	ShortStack
pab-b1.0cr1-10010	Picea abies (Norway Spruce) 1.0c	MA_54068:7561-8000	-	315,653	721.86	UUGGACUGAAGGGAGCUCCC	miR319	siRNA20	ShortStack
pab-b1.0cr1-11002	Picea abies (Norway Spruce) 1.0c	MA_72138:28121-28202	+	824	1.88	AAUAGUUUGAUCGUGUAAUU		siRNA20	ShortStack
pab-b1.0cr1-14081	Picea abies (Norway Spruce) 1.0c	MA_759860:8947-9058	+	24,125	55.17	AGGGCUAUAGCUCAGCAAGG		siRNA20	ShortStack
pab-b1.0cr1-12322	Picea abies (Norway Spruce) 1.0c	MA_912:54658-54745	-	324	0.74	GGGGAUGUAGCUCAGAUGGA		siRNA20	ShortStack