| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| atr-b1r1-165 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00001:2643252-2643335 | - | 2,271 | 48.34 | UGAUUGAGCCGCGCCAAUAUC | miR171 | MIRNA | ShortStack |
| atr-b1r1-441 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00001:6800508-6800691 | + | 263 | 5.60 | AAAGUUUUACGUUUGCUGUCUACC | | MIRNA | ShortStack |
| atr-b1r1-548 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00001:7920021-7920151 | + | 144 | 3.07 | UUUUGCUCAAGAUGGCGCAGC | | MIRNA | ShortStack |
| atr-b1r1-1625 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00002:8188919-8189077 | + | 160,480 | 3,415.86 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| atr-b1r1-1805 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00003:709725-709866 | + | 203 | 4.32 | AGAGGCCUUAGGGGAGAGUGG | miR477 | MIRNA | ShortStack |
| atr-b1r1-1806 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00003:741338-741403 | + | 54 | 1.15 | ACUCUCCCUCAAGGGCUUCUGA | miR477 | MIRNA | ShortStack |
| atr-b1r1-1807 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00003:785167-785232 | - | 38 | 0.81 | AGAAGCCCUCGGGGAGCGUGC | | MIRNA | ShortStack |
| atr-b1r1-1808 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00003:787295-787366 | + | 47 | 1.00 | ACUCUCCCUCAAUGGCUUCUC | | MIRNA | ShortStack |
| atr-b1r1-1898 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00003:2864174-2864240 | + | 31 | 0.66 | UCUGGAUUUGUGCUCUAAACAAGC | | MIRNA | ShortStack |
| atr-b1r1-2804 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00004:1713852-1713978 | + | 208,118 | 4,429.85 | UCUCGGACCAGGCUUCAUUCC | miR166 | MIRNA | ShortStack |
| atr-b1r1-2938 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00004:6062180-6062362 | + | 3,875 | 82.48 | CCGAGCUCCCAGGGUUAAUGG | miR8588 | MIRNA | ShortStack |
| atr-b1r1-4142 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00006:7705826-7706026 | - | 42 | 0.89 | AGGAUGGAUGUUGUUGGAUAG | | MIRNA | ShortStack |
| atr-b1r1-4275 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00007:304793-305071 | - | 980 | 20.86 | UUUAGUCAGCACGAUCGGUGGUGC | miR8598 | MIRNA | ShortStack |
| atr-b1r1-4551 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00007:3789170-3789359 | + | 3,664 | 77.99 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | ShortStack |
| atr-b1r1-4712 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00007:6003419-6003662 | + | 373 | 7.94 | CAAUAGCUAAAGUGAUUGUGACC | miR8614 | MIRNA | ShortStack |
| atr-b1r1-5347 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00008:2560481-2560720 | + | 48 | 1.02 | AUAGGAGUUACAUAAUAGAACACU | | MIRNA | ShortStack |
| atr-b1r1-6361 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00009:7849261-7849398 | - | 3,228 | 68.71 | AAUUGUCGGUCGCGCUACAGA | | MIRNA | ShortStack |
| atr-b1r1-6368 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00009:8165585-8165879 | + | 504 | 10.73 | UGAUACUCAUUUCAGCAAGCAA | miR828 | MIRNA | ShortStack |
| atr-b1r1-7463 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00011:6531715-6531859 | + | 3,594 | 76.50 | AGUUAACUAGGCAUCUAUAGGAUG | miR8555 | MIRNA | ShortStack |
| atr-b1r1-7667 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00011:8252725-8252921 | + | 17,537 | 373.28 | UCGCUUGGUGCAGGUCGGGAA | miR168 | MIRNA | ShortStack |
| atr-b1r1-8293 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00012:5434959-5435102 | + | 455 | 9.69 | UGUGGUACUAGUGGAAUUCAAGAC | | MIRNA | ShortStack |
| atr-b1r1-8723 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00013:1859876-1859958 | + | 28 | 0.60 | UGGUAUUGGAACGGCUCAAUC | | MIRNA | ShortStack |
| atr-b1r1-9744 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00014:5935399-5935598 | - | 2,961 | 63.03 | UUUGUUCAAGAUAGUGCAACU | | MIRNA | ShortStack |
| atr-b1r1-10296 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00016:5120379-5120443 | - | 3,544 | 75.44 | UCCUUGAGUGCAGCGUUGAUG | miR397 | MIRNA | ShortStack |
| atr-b1r1-10340 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00016:5887336-5887423 | - | 47 | 1.00 | GAGGCCUUAGAAGGAGAGUUC | | MIRNA | ShortStack |
| atr-b1r1-10800 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00017:2901056-2901174 | + | 62,284 | 1,325.73 | UUUCCGAAUCCGCCUAUACCUG | miR8558 | MIRNA | ShortStack |
| atr-b1r1-10924 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00017:4559639-4559780 | - | 667 | 14.20 | UGACACUGUAGUAGUCAACCCGUG | miR8559 | MIRNA | ShortStack |
| atr-b1r1-12310 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00021:124138-124205 | - | 55 | 1.17 | AUUAGAUGUGGGAAUAUUUUCAUA | | MIRNA | ShortStack |
| atr-b1r1-12586 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00021:2547189-2547452 | + | 189 | 4.02 | UGAAAUUCUAGCGAACUUUGGACC | | MIRNA | ShortStack |
| atr-b1r1-12743 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00021:4918136-4918395 | + | 584 | 12.43 | UAAUGGUUGAUAAUGAUUGUGACC | | MIRNA | ShortStack |
| atr-b1r1-13725 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00023:5789126-5789297 | - | 303 | 6.45 | CAUGUGUGUAGGAUUCCAAAUGAU | miR8565 | MIRNA | ShortStack |
| atr-b1r1-13845 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00024:566601-566805 | + | 4,217 | 89.76 | ACAAGAUGCACUAAUUUUAGGACU | miR8567 | MIRNA | ShortStack |
| atr-b1r1-14097 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00024:4164778-4165047 | - | 1,913 | 40.72 | UGGCUUACUGUGAUCGUUGUCC | miR8568 | MIRNA | ShortStack |
| atr-b1r1-15740 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00030:635571-635758 | - | 284 | 6.05 | UAGCUUCAACAGUGAUAGGGCAAG | | MIRNA | ShortStack |
| atr-b1r1-19810 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00039:1732352-1732492 | + | 488 | 10.39 | UAGGAGUCAUGACGUAGCUUG | miR8582 | MIRNA | ShortStack |
| atr-b1r1-20115 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00040:69975-70114 | + | 1,065 | 22.67 | UGAACCCUGGUCGUCGCGCUGUG | miR8584 | MIRNA | ShortStack |
| atr-b1r1-20594 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00041:1932086-1932172 | - | 7,562 | 160.96 | CGUGAUGUUGGUCCGGUUCAGU | | MIRNA | ShortStack |
| atr-b1r1-21577 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00045:1152327-1152419 | - | 4,607 | 98.06 | GCAGGGAUGAAGCUGAGCAUG | | MIRNA | ShortStack |
| atr-b1r1-21580 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00045:1236849-1236964 | - | 32 | 0.68 | AUUUUUGAGCCCCAAUAUCUCAUU | | MIRNA | ShortStack |
| atr-b1r1-21646 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00045:3520986-3521052 | - | 292 | 6.22 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | ShortStack |
| atr-b1r1-21926 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00046:1545701-1545772 | + | 6,363 | 135.44 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | ShortStack |
| atr-b1r1-22115 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00046:3620902-3621024 | - | 7,989 | 170.05 | UCACAGGAGAGAUGAUACUGGU | miR8585 | MIRNA | ShortStack |
| atr-b1r1-22925 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00048:2963791-2963881 | - | 130 | 2.77 | CUCUGUUGUUGUGAGAACAAA | miR8586 | MIRNA | ShortStack |
| atr-b1r1-22926 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00048:2976697-2976814 | - | 986 | 20.99 | UUUUCUCUUAACAACAGAGGA | miR8586 | MIRNA | ShortStack |
| atr-b1r1-24030 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00053:805762-805939 | + | 22,219 | 472.94 | UUGGACUGAAGGGAGCUCCC | miR319 | MIRNA | ShortStack |
| atr-b1r1-25453 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00057:2389300-2389410 | - | 59 | 1.26 | AGCAAGUCGCCUUGGCUAACC | miR169 | MIRNA | ShortStack |
| atr-b1r1-26367 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00060:2574024-2574132 | + | 336 | 7.15 | CUGAAGUGUUUGGGGGAACUC | miR395 | MIRNA | ShortStack |
| atr-b1r1-26460 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00060:3430251-3430402 | + | 277 | 5.90 | UUGAGCCGUGCCAAUAUCACA | miR171 | MIRNA | ShortStack |
| atr-b1r1-28070 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00065:3401574-3401657 | - | 2,294 | 48.83 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| atr-b1r1-29451 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00071:3736341-3736510 | - | 2,131 | 45.36 | UCGGACCAGGCUUCGUCCCUC | | MIRNA | ShortStack |
| atr-b1r1-30327 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00075:2165969-2166089 | + | 24 | 0.51 | UUUGACAUCUAAUAGCUAGGAGUA | | MIRNA | ShortStack |
| atr-b1r1-30672 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00077:2616715-2616895 | + | 1,089 | 23.18 | UUGGACUGAAGGGAGCUCCC | miR319 | MIRNA | ShortStack |
| atr-b1r1-30833 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00078:1386430-1386546 | - | 1,206 | 25.67 | CUAAUGAUAAACUUAGAAUUUCCU | | MIRNA | ShortStack |
| atr-b1r1-32634 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00086:3032870-3033007 | + | 53 | 1.13 | UGUGUGUAGGAUCUCAAAGAA | | MIRNA | ShortStack |
| atr-b1r1-32660 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00087:73101-73352 | + | 5,177 | 110.19 | UGACAACGAGAGAGAGCACGC | miR535 | MIRNA | ShortStack |
| atr-b1r1-32805 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00088:670617-670700 | - | 549 | 11.69 | UGAUUGAGCCGCGCCAAUAUC | miR171 | MIRNA | ShortStack |
| atr-b1r1-33464 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00090:1850296-1850526 | - | 3,665 | 78.01 | CUCCACGGCUUUCUUGAACUU | miR396 | MIRNA | ShortStack |
| atr-b1r1-33856 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00092:1776659-1776743 | - | 453 | 9.64 | UGCCUGGCUCCCUGUAUGCCA | miR160 | MIRNA | ShortStack |
| atr-b1r1-35368 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00102:1169793-1170011 | + | 22,582 | 480.66 | UGUGUUCCCAGGUCGCCCCUG | miR398 | MIRNA | ShortStack |
| atr-b1r1-35487 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00103:54042-54251 | + | 8,896 | 189.35 | AUCUCAUGUAGAUGACGUCACACC | miR8600 | MIRNA | ShortStack |
| atr-b1r1-36361 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00108:1352023-1352094 | - | 11,332 | 241.21 | UCAGGAGAGAUGAUGCCGGCC | miR8602 | MIRNA | ShortStack |
| atr-b1r1-40112 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00144:502441-502530 | - | 442 | 9.41 | CGAGACCUUGCAGAACACAACUCU | | MIRNA | ShortStack |
| atr-b1r1-41970 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00165:819333-819447 | + | 11,818 | 251.55 | UAAUCUGUAUCUUGAGGUUUG | miR2111 | MIRNA | ShortStack |
| atr-b1r1-42520 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00175:275979-276167 | - | 36 | 0.77 | UAAUGGUCAAUAAUGAUUGUGAUC | | MIRNA | ShortStack |
| atr-b1r1-43077 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00188:56175-56247 | + | 113 | 2.41 | UUCCGUAUGGUAGAGCGCUGCA | | MIRNA | ShortStack |
| atr-b1r1-44034 | Amborella trichopoda (Amborella) 1 | AmTr_v1.0_scaffold00488:2999-3105 | - | 50 | 1.06 | UCCAUAGGCUUUCUUGAACAU | | MIRNA | ShortStack |
Data from Lunardon et al. (2020)