| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| ccl-b1r1-122 | Citrus clementina (Clementine) 1 | scaffold_1:1961353-1961616 | . | 3,139 | 69.53 | GCUAGCGGAUCUUGUUGGAGGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-123 | Citrus clementina (Clementine) 1 | scaffold_1:1964351-1964825 | . | 1,423 | 31.52 | CAUGGAUGAGAGCUUUUGUGGC | | siRNA22 | ShortStack |
| ccl-b1r1-213 | Citrus clementina (Clementine) 1 | scaffold_1:3476234-3476258 | - | 316 | 7.00 | AUUUACUGACACACUUUGACAG | | siRNA22 | ShortStack |
| ccl-b1r1-214 | Citrus clementina (Clementine) 1 | scaffold_1:3494970-3494995 | - | 313 | 6.93 | AUUUACUGACACACUUUGACAG | | siRNA22 | ShortStack |
| ccl-b1r1-299 | Citrus clementina (Clementine) 1 | scaffold_1:4299580-4299695 | - | 1,165 | 25.81 | ACCUGUAGCCAUUCUGACCAA | | siRNA22 | ShortStack |
| ccl-b1r1-436 | Citrus clementina (Clementine) 1 | scaffold_1:6555098-6555204 | - | 200 | 4.43 | UUCUGAAUUCUGCUUAAUCACA | | siRNA22 | ShortStack |
| ccl-b1r1-454 | Citrus clementina (Clementine) 1 | scaffold_1:6582450-6582807 | - | 851 | 18.85 | CCACUGGUUUGGGCUCAAAACU | | siRNA22 | ShortStack |
| ccl-b1r1-514 | Citrus clementina (Clementine) 1 | scaffold_1:7646068-7646133 | - | 36,948 | 818.39 | AGUUACUAAUUCAUGAUCUGGC | | siRNA22 | ShortStack |
| ccl-b1r1-547 | Citrus clementina (Clementine) 1 | scaffold_1:8408705-8408821 | . | 86 | 1.91 | AAAAAUAAAUCCUUACUAUCCC | | siRNA22 | ShortStack |
| ccl-b1r1-791 | Citrus clementina (Clementine) 1 | scaffold_1:15951561-15951656 | + | 213 | 4.72 | CGAGAUUCGUCGUUGAAGAACA | | siRNA22 | ShortStack |
| ccl-b1r1-853 | Citrus clementina (Clementine) 1 | scaffold_1:16753520-16753769 | . | 155 | 3.43 | UAGCAUUCGGGACUACAUCAAC | | siRNA22 | ShortStack |
| ccl-b1r1-865 | Citrus clementina (Clementine) 1 | scaffold_1:17233551-17233820 | . | 364 | 8.06 | AACUUCUGAUCGUGCCAUAUCGGA | | siRNA22 | ShortStack |
| ccl-b1r1-868 | Citrus clementina (Clementine) 1 | scaffold_1:17235615-17235868 | . | 233 | 5.16 | AACUUCUGAUCGUGCCAUAUCGGA | | siRNA22 | ShortStack |
| ccl-b1r1-870 | Citrus clementina (Clementine) 1 | scaffold_1:17236946-17237166 | . | 229 | 5.07 | CACCAUCAUCGUCAGGAUUAGA | | siRNA22 | ShortStack |
| ccl-b1r1-1097 | Citrus clementina (Clementine) 1 | scaffold_1:21925347-21925479 | - | 776 | 17.19 | CUUUCACUCUUUUUGUUGCAUG | | siRNA22 | ShortStack |
| ccl-b1r1-1099 | Citrus clementina (Clementine) 1 | scaffold_1:21928171-21928377 | . | 1,503 | 33.29 | CCUCGGCAUGGAAUUCUUCGAC | | siRNA22 | ShortStack |
| ccl-b1r1-1100 | Citrus clementina (Clementine) 1 | scaffold_1:21928916-21929022 | . | 139 | 3.08 | UACUUGGACGACAUUGUGGUGU | | siRNA22 | ShortStack |
| ccl-b1r1-1197 | Citrus clementina (Clementine) 1 | scaffold_1:23636972-23637018 | . | 137 | 3.04 | CCUCGGCAUGGAAUUCUUCGAC | | siRNA22 | ShortStack |
| ccl-b1r1-1400 | Citrus clementina (Clementine) 1 | scaffold_1:27168923-27168986 | - | 101 | 2.24 | AUUAUUAAUUUGCUUUUUGAAG | | siRNA22 | ShortStack |
| ccl-b1r1-1557 | Citrus clementina (Clementine) 1 | scaffold_1288:522-546 | + | 223 | 4.94 | CUGGACGCAGGCUAUAUUCGCC | | siRNA22 | ShortStack |
| ccl-b1r1-1572 | Citrus clementina (Clementine) 1 | scaffold_1559:3411-3669 | . | 204 | 4.52 | UAGCAUUCGGGACUACAUCAAC | | siRNA22 | ShortStack |
| ccl-b1r1-1652 | Citrus clementina (Clementine) 1 | scaffold_2:795121-795214 | . | 76 | 1.68 | UUAUACUUGUAUUCUAAAGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-1861 | Citrus clementina (Clementine) 1 | scaffold_2:6478854-6479104 | . | 1,116 | 24.72 | CGGACAAUGCUAUUUCGAGAGU | | siRNA22 | ShortStack |
| ccl-b1r1-2263 | Citrus clementina (Clementine) 1 | scaffold_2:12454828-12454849 | - | 160 | 3.54 | GCUAGCCAAGGAUGACUUGCCU | miR169 | siRNA22 | ShortStack |
| ccl-b1r1-2386 | Citrus clementina (Clementine) 1 | scaffold_2:14922042-14922175 | - | 298 | 6.60 | GGUAUAUCGGUUGGAAACCC | | siRNA22 | ShortStack |
| ccl-b1r1-2387 | Citrus clementina (Clementine) 1 | scaffold_2:14929118-14929151 | - | 64 | 1.42 | CGAUUGAGAAACAAUGAUUUGU | | siRNA22 | ShortStack |
| ccl-b1r1-2544 | Citrus clementina (Clementine) 1 | scaffold_2:21069936-21070030 | . | 68 | 1.51 | CAUGUCGGGAGAUAAUGAUCCU | | siRNA22 | ShortStack |
| ccl-b1r1-2568 | Citrus clementina (Clementine) 1 | scaffold_2:21355443-21355588 | . | 133 | 2.95 | CGAGAACUUGAGAUCGGUCCCC | | siRNA22 | ShortStack |
| ccl-b1r1-2577 | Citrus clementina (Clementine) 1 | scaffold_2:21544685-21544782 | - | 175 | 3.88 | CUCCACCGUCCUUGUAGAUAGU | | siRNA22 | ShortStack |
| ccl-b1r1-2578 | Citrus clementina (Clementine) 1 | scaffold_2:21592594-21592686 | + | 181 | 4.01 | CUCCACCGUCCUUGUAGAUAGU | | siRNA22 | ShortStack |
| ccl-b1r1-2674 | Citrus clementina (Clementine) 1 | scaffold_2:23293713-23293968 | . | 322 | 7.13 | UGUUGAUGAUGAUGAAGAGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-2781 | Citrus clementina (Clementine) 1 | scaffold_2:25046454-25046520 | . | 20 | 0.44 | CAAGUCCAGCUUCUGCAAACU | | siRNA22 | ShortStack |
| ccl-b1r1-2901 | Citrus clementina (Clementine) 1 | scaffold_2:26838266-26838384 | . | 102 | 2.26 | AAGGAUGAAAUGGACUAUUACA | | siRNA22 | ShortStack |
| ccl-b1r1-3030 | Citrus clementina (Clementine) 1 | scaffold_2:28637294-28637669 | - | 62,099 | 1,375.48 | UUGCCAACUCCUCCCAUGCCGA | miR482 | siRNA22 | ShortStack |
| ccl-b1r1-3565 | Citrus clementina (Clementine) 1 | scaffold_3:3078050-3078114 | . | 114 | 2.53 | UUGUGGCCAAGGAACUCCACCU | | siRNA22 | ShortStack |
| ccl-b1r1-3866 | Citrus clementina (Clementine) 1 | scaffold_3:7004072-7004229 | . | 85 | 1.88 | CUGGAUGCAACGGUGAUAACGU | | siRNA22 | ShortStack |
| ccl-b1r1-3871 | Citrus clementina (Clementine) 1 | scaffold_3:7099770-7100100 | . | 416 | 9.21 | UUUUCAUACUUUUCAGCAGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-3872 | Citrus clementina (Clementine) 1 | scaffold_3:7100843-7100890 | . | 76 | 1.68 | CGAGCUCGAGUGGACAAAAAAC | | siRNA22 | ShortStack |
| ccl-b1r1-3999 | Citrus clementina (Clementine) 1 | scaffold_3:8983611-8983955 | . | 573 | 12.69 | CGAGGCUUGAACUAGUGCGGUGG | | siRNA22 | ShortStack |
| ccl-b1r1-4000 | Citrus clementina (Clementine) 1 | scaffold_3:8984538-8984669 | . | 228 | 5.05 | UUUCCGCAAAGUCUUGAAUUG | | siRNA22 | ShortStack |
| ccl-b1r1-4048 | Citrus clementina (Clementine) 1 | scaffold_3:9672895-9673006 | . | 243 | 5.38 | UUUCUACUGUGGCAUCUGAGUC | | siRNA22 | ShortStack |
| ccl-b1r1-4049 | Citrus clementina (Clementine) 1 | scaffold_3:9673220-9673521 | . | 330 | 7.31 | UUCGGGUUCUUUAUAUGUGACC | | siRNA22 | ShortStack |
| ccl-b1r1-4102 | Citrus clementina (Clementine) 1 | scaffold_3:10782523-10782546 | + | 25 | 0.55 | AAUGGAUCAGAAUGAUAAAACC | | siRNA22 | ShortStack |
| ccl-b1r1-4124 | Citrus clementina (Clementine) 1 | scaffold_3:11212106-11212565 | . | 4,780 | 105.88 | UUAUCUAAGUCGGAAUAAAGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-4281 | Citrus clementina (Clementine) 1 | scaffold_3:16882650-16883022 | . | 4,237 | 93.85 | UUUGGAAGAGGACCGGUGCACC | | siRNA22 | ShortStack |
| ccl-b1r1-4283 | Citrus clementina (Clementine) 1 | scaffold_3:16884900-16885112 | . | 337 | 7.46 | CACGGAUAGGGCCUUGGACUUGCC | | siRNA22 | ShortStack |
| ccl-b1r1-4370 | Citrus clementina (Clementine) 1 | scaffold_3:19800511-19800535 | - | 10,318 | 228.54 | AGUUACUAAUUCAUGAUCUGGC | | siRNA22 | ShortStack |
| ccl-b1r1-4383 | Citrus clementina (Clementine) 1 | scaffold_3:20405829-20405890 | . | 142 | 3.15 | CUUGGACCACCAUUUGACUUUA | | siRNA22 | ShortStack |
| ccl-b1r1-4391 | Citrus clementina (Clementine) 1 | scaffold_3:20716768-20716882 | - | 180 | 3.99 | UACUCUACCCAAUCCAAGGACA | | siRNA22 | ShortStack |
| ccl-b1r1-4392 | Citrus clementina (Clementine) 1 | scaffold_3:20717105-20717237 | . | 340 | 7.53 | CGAUGCCAUGGGUGUCCGAGAU | | siRNA22 | ShortStack |
| ccl-b1r1-4413 | Citrus clementina (Clementine) 1 | scaffold_3:21353892-21354123 | . | 544 | 12.05 | UUUCUACUGUGGCAUCUGAGUC | | siRNA22 | ShortStack |
| ccl-b1r1-4437 | Citrus clementina (Clementine) 1 | scaffold_3:22408866-22408901 | + | 104 | 2.30 | AACCAAGAUACCCAUUUUAGUAGA | | siRNA22 | ShortStack |
| ccl-b1r1-4439 | Citrus clementina (Clementine) 1 | scaffold_3:22410493-22410776 | . | 144 | 3.19 | AGAAUAAUGUAAGAAUCUCCCU | | siRNA22 | ShortStack |
| ccl-b1r1-4492 | Citrus clementina (Clementine) 1 | scaffold_3:23423041-23423136 | - | 980 | 21.71 | GUUAUUCUAUUCCACCUCUUAG | | siRNA22 | ShortStack |
| ccl-b1r1-4513 | Citrus clementina (Clementine) 1 | scaffold_3:23834552-23834584 | . | 403 | 8.93 | UACAUAUACGGAAAUACAGACU | | siRNA22 | ShortStack |
| ccl-b1r1-4610 | Citrus clementina (Clementine) 1 | scaffold_3:28691063-28691165 | - | 150 | 3.32 | CUACAACCAACCCUGGAAGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-4644 | Citrus clementina (Clementine) 1 | scaffold_3:30589542-30589580 | + | 51 | 1.13 | AGGCAUCCGUUUGAACUUCGAAGG | | siRNA22 | ShortStack |
| ccl-b1r1-4645 | Citrus clementina (Clementine) 1 | scaffold_3:30591300-30591622 | . | 4,428 | 98.08 | CAAGUGUUUGAACACCACGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-4898 | Citrus clementina (Clementine) 1 | scaffold_3:36878114-36878272 | - | 152 | 3.37 | UACAAACCUUUGAAUAAAGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-4914 | Citrus clementina (Clementine) 1 | scaffold_3:37185090-37185427 | . | 309 | 6.84 | UGAGGAACUUCUGUGUAUUCAGU | | siRNA22 | ShortStack |
| ccl-b1r1-4928 | Citrus clementina (Clementine) 1 | scaffold_3:37436225-37436361 | + | 250 | 5.54 | UAUCCGUGGAUGCGUUGGAGCC | | siRNA22 | ShortStack |
| ccl-b1r1-4943 | Citrus clementina (Clementine) 1 | scaffold_3:37770683-37770987 | . | 185 | 4.10 | GAAGUCCGCUCGGAUUGGGCA | | siRNA22 | ShortStack |
| ccl-b1r1-5544 | Citrus clementina (Clementine) 1 | scaffold_3:46885101-46885221 | . | 178 | 3.94 | UAACAUGAUCAAAGAUUGGCUC | | siRNA22 | ShortStack |
| ccl-b1r1-6286 | Citrus clementina (Clementine) 1 | scaffold_4:8615722-8615969 | . | 1,668 | 36.95 | UUGUGGCCAAGGAACUCCACCU | | siRNA22 | ShortStack |
| ccl-b1r1-6287 | Citrus clementina (Clementine) 1 | scaffold_4:8616450-8616504 | . | 179 | 3.97 | GGAAAGCCAAUGUUGUUGCGGACG | | siRNA22 | ShortStack |
| ccl-b1r1-6332 | Citrus clementina (Clementine) 1 | scaffold_4:10209271-10209486 | . | 354 | 7.84 | GUUAACAUGAUCAAAGAUUGGCUC | | siRNA22 | ShortStack |
| ccl-b1r1-6365 | Citrus clementina (Clementine) 1 | scaffold_4:10933011-10933227 | - | 551 | 12.21 | CUACAACCAACCCUGGAAGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-6395 | Citrus clementina (Clementine) 1 | scaffold_4:11531803-11532068 | . | 4,952 | 109.69 | CGACGCAUUCUGCUCUGUGCUU | | siRNA22 | ShortStack |
| ccl-b1r1-6407 | Citrus clementina (Clementine) 1 | scaffold_4:11666011-11666216 | . | 232 | 5.14 | CAAGGAUCUUCUCUGCUGAGA | | siRNA22 | ShortStack |
| ccl-b1r1-6562 | Citrus clementina (Clementine) 1 | scaffold_4:14708673-14708711 | . | 68 | 1.51 | CAUCCGAAGAGGCUAUAGAAGU | | siRNA22 | ShortStack |
| ccl-b1r1-6582 | Citrus clementina (Clementine) 1 | scaffold_4:14963054-14963150 | - | 4,697 | 104.04 | UUACGAUGAGGAUUCACAGCUC | | siRNA22 | ShortStack |
| ccl-b1r1-6651 | Citrus clementina (Clementine) 1 | scaffold_4:16458657-16458970 | . | 652 | 14.44 | CUCCACCGUCCUUGUAGAUAGU | | siRNA22 | ShortStack |
| ccl-b1r1-6768 | Citrus clementina (Clementine) 1 | scaffold_4:18557487-18557567 | . | 140 | 3.10 | AGGGAUACAAGGGACUACACCU | | siRNA22 | ShortStack |
| ccl-b1r1-6770 | Citrus clementina (Clementine) 1 | scaffold_4:18558091-18558171 | + | 536 | 11.87 | UCCGGAUCUUGAUAAUGAGUUC | | siRNA22 | ShortStack |
| ccl-b1r1-6840 | Citrus clementina (Clementine) 1 | scaffold_4:19609930-19610010 | - | 139 | 3.08 | UUGGGAAUGAGAAUGUGAGAAU | | siRNA22 | ShortStack |
| ccl-b1r1-6847 | Citrus clementina (Clementine) 1 | scaffold_4:19655958-19655981 | - | 297 | 6.58 | UUUUAUAACACUUUCUCUGCAG | | siRNA22 | ShortStack |
| ccl-b1r1-7297 | Citrus clementina (Clementine) 1 | scaffold_5:54000-54016 | . | 57 | 1.26 | UUCUGUUUUGCACUCUACAAAA | | siRNA22 | ShortStack |
| ccl-b1r1-7391 | Citrus clementina (Clementine) 1 | scaffold_5:2241566-2241700 | - | 1,041 | 23.06 | ACCUGUAGCCAUUCUGACCAA | | siRNA22 | ShortStack |
| ccl-b1r1-7488 | Citrus clementina (Clementine) 1 | scaffold_5:5785932-5785953 | + | 144 | 3.19 | CUGGACGCAGGCUAUAUUCGCC | | siRNA22 | ShortStack |
| ccl-b1r1-7490 | Citrus clementina (Clementine) 1 | scaffold_5:5787800-5788070 | . | 1,406 | 31.14 | CGUAAGUCGAGGCUAUGGCAUU | | siRNA22 | ShortStack |
| ccl-b1r1-7538 | Citrus clementina (Clementine) 1 | scaffold_5:7326192-7326297 | . | 163 | 3.61 | UUGGAUCCGAGAGCUUUACAAU | | siRNA22 | ShortStack |
| ccl-b1r1-7544 | Citrus clementina (Clementine) 1 | scaffold_5:8117604-8117679 | - | 362 | 8.02 | CUGAAUACAACAUCCUAGGAUU | | siRNA22 | ShortStack |
| ccl-b1r1-7552 | Citrus clementina (Clementine) 1 | scaffold_5:8889660-8889698 | - | 149 | 3.30 | UUUCAAAGCAUGCUUGCAGACU | | siRNA22 | ShortStack |
| ccl-b1r1-7595 | Citrus clementina (Clementine) 1 | scaffold_5:11109356-11109620 | . | 389 | 8.62 | CGCUCGGAUUGGGCAUGGCACA | | siRNA22 | ShortStack |
| ccl-b1r1-7621 | Citrus clementina (Clementine) 1 | scaffold_5:12474425-12474538 | - | 199 | 4.41 | AACCUUUUUGCUGUAGAAGUCCCU | | siRNA22 | ShortStack |
| ccl-b1r1-7668 | Citrus clementina (Clementine) 1 | scaffold_5:13596704-13597117 | . | 314 | 6.96 | UAACAUGAUCAAAGAUUGGCUC | | siRNA22 | ShortStack |
| ccl-b1r1-7677 | Citrus clementina (Clementine) 1 | scaffold_5:14695089-14695187 | + | 1,243 | 27.53 | GUUAUUCUAUUCCACCUCUUAG | | siRNA22 | ShortStack |
| ccl-b1r1-7678 | Citrus clementina (Clementine) 1 | scaffold_5:14710556-14711283 | . | 1,014 | 22.46 | CUGGCAACUAGGCAUUGAACCC | | siRNA22 | ShortStack |
| ccl-b1r1-7789 | Citrus clementina (Clementine) 1 | scaffold_5:16951537-16951714 | + | 1,857 | 41.13 | UUGGACAGAGAAAUCACGGUCA | miR3954 | siRNA22 | ShortStack |
| ccl-b1r1-7792 | Citrus clementina (Clementine) 1 | scaffold_5:16979825-16980141 | . | 92 | 2.04 | GGCUUUCCAGGAUGUAAACUC | | siRNA22 | ShortStack |
| ccl-b1r1-7873 | Citrus clementina (Clementine) 1 | scaffold_5:18675195-18675251 | + | 96 | 2.13 | ACUCGGACCAAGACAUAACUUU | | siRNA22 | ShortStack |
| ccl-b1r1-7894 | Citrus clementina (Clementine) 1 | scaffold_5:20149414-20150104 | . | 2,678 | 59.32 | CCAAGGAGAGAAGACAUGGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-7898 | Citrus clementina (Clementine) 1 | scaffold_5:20216742-20217571 | . | 17,004 | 376.64 | CAUCUUUGGACCCAUAUCUGCC | | siRNA22 | ShortStack |
| ccl-b1r1-8020 | Citrus clementina (Clementine) 1 | scaffold_5:23667516-23667640 | . | 76 | 1.68 | AUUUUGAGUUUGCCAGUUGAGGAC | | siRNA22 | ShortStack |
| ccl-b1r1-8021 | Citrus clementina (Clementine) 1 | scaffold_5:23737001-23737250 | . | 427 | 9.46 | CAUUGAAAGUGGGCAUUGGGAA | | siRNA22 | ShortStack |
| ccl-b1r1-8023 | Citrus clementina (Clementine) 1 | scaffold_5:23738504-23738753 | . | 345 | 7.64 | CCGAAGAACUCCAACCCAACAU | | siRNA22 | ShortStack |
| ccl-b1r1-8073 | Citrus clementina (Clementine) 1 | scaffold_5:25258977-25259106 | + | 120 | 2.66 | CAAGUACUUCGAGACAAUGAGC | | siRNA22 | ShortStack |
| ccl-b1r1-8160 | Citrus clementina (Clementine) 1 | scaffold_5:27803645-27803745 | - | 1,707 | 37.81 | CGUCGUAAACUCGUCUCGUACU | | siRNA22 | ShortStack |
| ccl-b1r1-8265 | Citrus clementina (Clementine) 1 | scaffold_5:31548672-31548853 | . | 108 | 2.39 | UUUUGGACUAAAUUACCCUCGU | | siRNA22 | ShortStack |
| ccl-b1r1-8274 | Citrus clementina (Clementine) 1 | scaffold_5:31863385-31863424 | + | 146 | 3.23 | UUGGACACCGAGAAAAUGUAUC | | siRNA22 | ShortStack |
| ccl-b1r1-8587 | Citrus clementina (Clementine) 1 | scaffold_5:36874413-36874448 | - | 3,039 | 67.31 | AGUUACUAAUUCAUGAUCUGGC | | siRNA22 | ShortStack |
| ccl-b1r1-8654 | Citrus clementina (Clementine) 1 | scaffold_5:37863490-37863522 | + | 757 | 16.77 | AAUUCUAACAAGUUUCCUGUAG | | siRNA22 | ShortStack |
| ccl-b1r1-8684 | Citrus clementina (Clementine) 1 | scaffold_5:38373510-38373534 | - | 160 | 3.54 | CUUAAUUAUCCUCUGUCUGAAG | | siRNA22 | ShortStack |
| ccl-b1r1-9026 | Citrus clementina (Clementine) 1 | scaffold_6:1698550-1698652 | . | 99 | 2.19 | CCGGAAGCACUAGAAAUCAAAG | | siRNA22 | ShortStack |
| ccl-b1r1-9043 | Citrus clementina (Clementine) 1 | scaffold_6:1985021-1985096 | . | 280 | 6.20 | CAAAGCAUCUACUAUUCAAAGC | | siRNA22 | ShortStack |
| ccl-b1r1-9060 | Citrus clementina (Clementine) 1 | scaffold_6:2590463-2590658 | . | 516 | 11.43 | UCUUUGAAGGAUGACUUGGGAC | | siRNA22 | ShortStack |
| ccl-b1r1-9089 | Citrus clementina (Clementine) 1 | scaffold_6:3441368-3441395 | - | 100 | 2.22 | UUGGACCAUGGAUUUUUAGAAA | | siRNA22 | ShortStack |
| ccl-b1r1-9310 | Citrus clementina (Clementine) 1 | scaffold_6:9467938-9467976 | + | 131 | 2.90 | AGAAAUUCUCUAGUACAUUGGA | | siRNA22 | ShortStack |
| ccl-b1r1-9359 | Citrus clementina (Clementine) 1 | scaffold_6:10115707-10115965 | . | 315 | 6.98 | CUACAUCAAAAUCGGAUUCUGA | | siRNA22 | ShortStack |
| ccl-b1r1-9360 | Citrus clementina (Clementine) 1 | scaffold_6:10116455-10116670 | + | 193 | 4.28 | CUAAGAGAUAAAACUGUUGAGU | | siRNA22 | ShortStack |
| ccl-b1r1-9361 | Citrus clementina (Clementine) 1 | scaffold_6:10117845-10118017 | . | 235 | 5.21 | CAUUAUUAUGCACUGAGGCAUC | | siRNA22 | ShortStack |
| ccl-b1r1-9618 | Citrus clementina (Clementine) 1 | scaffold_6:14613875-14613899 | - | 393 | 8.71 | AACGGACUCUUGCCUGUAGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-10251 | Citrus clementina (Clementine) 1 | scaffold_6:24533834-24534059 | . | 419 | 9.28 | CUUACCGUUUAUAUGUUUGGCU | | siRNA22 | ShortStack |
| ccl-b1r1-10648 | Citrus clementina (Clementine) 1 | scaffold_7:5276142-5276291 | + | 4,073 | 90.22 | UCAAGUGAGGUUCGGUCUUUGA | | siRNA22 | ShortStack |
| ccl-b1r1-10649 | Citrus clementina (Clementine) 1 | scaffold_7:5276476-5276797 | + | 309 | 6.84 | AAAGGCCGAACCUCACCUGACA | | siRNA22 | ShortStack |
| ccl-b1r1-10883 | Citrus clementina (Clementine) 1 | scaffold_7:8303813-8303940 | . | 249 | 5.52 | UUUCUACUGUGGCAUCUGAGUC | | siRNA22 | ShortStack |
| ccl-b1r1-10884 | Citrus clementina (Clementine) 1 | scaffold_7:8305319-8305570 | . | 570 | 12.63 | CGACCGGGAUAUUUUAGACACC | | siRNA22 | ShortStack |
| ccl-b1r1-11269 | Citrus clementina (Clementine) 1 | scaffold_7:15654645-15655069 | . | 901 | 19.96 | CAUACCCAUCAAAUCUUGGAUU | | siRNA22 | ShortStack |
| ccl-b1r1-11345 | Citrus clementina (Clementine) 1 | scaffold_7:16956726-16956799 | + | 91 | 2.02 | CUCCACCGUCCUUGUAGAUAGU | | siRNA22 | ShortStack |
| ccl-b1r1-11346 | Citrus clementina (Clementine) 1 | scaffold_7:16966708-16966800 | . | 84 | 1.86 | UGCCGAGGACCAUCUUGAAGUC | | siRNA22 | ShortStack |
| ccl-b1r1-11490 | Citrus clementina (Clementine) 1 | scaffold_7:19517858-19517910 | - | 218 | 4.83 | UCACUCGAGUUUGCGGAAGCUG | | siRNA22 | ShortStack |
| ccl-b1r1-11491 | Citrus clementina (Clementine) 1 | scaffold_7:19574917-19574984 | . | 164 | 3.63 | CAUUGAGAGUCAGAGUUUUGUU | | siRNA22 | ShortStack |
| ccl-b1r1-11494 | Citrus clementina (Clementine) 1 | scaffold_7:19588271-19588318 | + | 450 | 9.97 | UUGGAUCCGAGAGCUUUACAAU | | siRNA22 | ShortStack |
| ccl-b1r1-11927 | Citrus clementina (Clementine) 1 | scaffold_8:4420514-4420809 | . | 159 | 3.52 | UUCUCUCGCUCUGCAUAUGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-11928 | Citrus clementina (Clementine) 1 | scaffold_8:4424613-4424792 | . | 266 | 5.89 | CAGACACAUGGACUUCAGCUCA | | siRNA22 | ShortStack |
| ccl-b1r1-11929 | Citrus clementina (Clementine) 1 | scaffold_8:4424913-4425024 | . | 48 | 1.06 | UUUUGUCCACUCGAGCUCGACC | | siRNA22 | ShortStack |
| ccl-b1r1-12100 | Citrus clementina (Clementine) 1 | scaffold_8:6878594-6878740 | . | 2,080 | 46.07 | AUGAAACCUGAUGAAUCUGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-12385 | Citrus clementina (Clementine) 1 | scaffold_8:15350215-15350419 | . | 185 | 4.10 | UGUUGAUGAUGAUGAAGAGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-12400 | Citrus clementina (Clementine) 1 | scaffold_8:16183175-16183208 | - | 131 | 2.90 | AGCGCACGAACGGACUGACCGU | | siRNA22 | ShortStack |
| ccl-b1r1-12442 | Citrus clementina (Clementine) 1 | scaffold_8:16960770-16960899 | + | 176 | 3.90 | UCGGAUAACAAUUGAAUGAAAU | | siRNA22 | ShortStack |
| ccl-b1r1-12492 | Citrus clementina (Clementine) 1 | scaffold_8:17461695-17461777 | - | 709 | 15.70 | UUCCACCAAAGCAUUCAUUUCC | | siRNA22 | ShortStack |
| ccl-b1r1-12621 | Citrus clementina (Clementine) 1 | scaffold_8:20249605-20249699 | + | 1,099 | 24.34 | UAUGGUGACCGAGGAACCUGAC | | siRNA22 | ShortStack |
| ccl-b1r1-12630 | Citrus clementina (Clementine) 1 | scaffold_8:20256995-20257086 | - | 1,135 | 25.14 | UAUGGUGACCGAGGAACCUGAC | | siRNA22 | ShortStack |
| ccl-b1r1-12631 | Citrus clementina (Clementine) 1 | scaffold_8:20257503-20257813 | . | 878 | 19.45 | UUGGAUGCAAUGUUUUGAACAU | | siRNA22 | ShortStack |
| ccl-b1r1-12676 | Citrus clementina (Clementine) 1 | scaffold_8:21103944-21103979 | + | 693 | 15.35 | UCACCCAUGAUGGUUUGAUGAC | | siRNA22 | ShortStack |
| ccl-b1r1-12988 | Citrus clementina (Clementine) 1 | scaffold_9:286235-286331 | . | 201 | 4.45 | CACAAACGGAUGGGCAGACCGAG | | siRNA22 | ShortStack |
| ccl-b1r1-13192 | Citrus clementina (Clementine) 1 | scaffold_9:3734623-3734934 | . | 148 | 3.28 | CGAGCUCGAGUGGACAAAAAAC | | siRNA22 | ShortStack |
| ccl-b1r1-13347 | Citrus clementina (Clementine) 1 | scaffold_9:6672233-6672410 | . | 318 | 7.04 | UCACUCGAGUUUGCGGAAGCUG | | siRNA22 | ShortStack |
| ccl-b1r1-13406 | Citrus clementina (Clementine) 1 | scaffold_9:8136708-8136955 | . | 3,112 | 68.93 | CUACAACCAACCCUGGAAGCCU | | siRNA22 | ShortStack |
| ccl-b1r1-13471 | Citrus clementina (Clementine) 1 | scaffold_9:10558161-10558470 | . | 1,799 | 39.85 | CUUCCAGCGGGAUUGUUAGAGC | | siRNA22 | ShortStack |
| ccl-b1r1-13490 | Citrus clementina (Clementine) 1 | scaffold_9:11098004-11098055 | + | 55 | 1.22 | CGAUUGAGAAACAAUGAUUUGU | | siRNA22 | ShortStack |
| ccl-b1r1-13896 | Citrus clementina (Clementine) 1 | scaffold_9:24722752-24722941 | . | 200 | 4.43 | AUGUGCGAACUUGUCUUGUGUGCC | | siRNA22 | ShortStack |
| ccl-b1r1-14012 | Citrus clementina (Clementine) 1 | scaffold_9:27179996-27180022 | - | 202 | 4.47 | CUUGGCCUCGUCUACGGACACG | | siRNA22 | ShortStack |
| ccl-b1r1-14025 | Citrus clementina (Clementine) 1 | scaffold_9:27668993-27669267 | . | 308 | 6.82 | CUCCACCGUCCUUGUAGAUAGU | | siRNA22 | ShortStack |
| ccl-b1r1-14038 | Citrus clementina (Clementine) 1 | scaffold_9:27805347-27805587 | . | 118 | 2.61 | CAGACCGAGCGCAUUAAUGGC | | siRNA22 | ShortStack |
| ccl-b1r1-14039 | Citrus clementina (Clementine) 1 | scaffold_9:27810423-27810568 | . | 189 | 4.19 | UAUCCGUGGAUGCGUUGGAGCC | | siRNA22 | ShortStack |
| ccl-b1r1-14125 | Citrus clementina (Clementine) 1 | scaffold_9:29029149-29029262 | - | 3,072 | 68.04 | UCCAAAGGGAUCGCAUUGAUUU | miR393 | siRNA22 | ShortStack |
Data from Lunardon et al. (2020)