| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| ghr-b1.1r1-665 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:4220736-4220851 | + | 628 | 0.68 | AACCAAGCUAAAGUCUGACUCUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-826 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:6153515-6153664 | - | 1,598 | 1.73 | UACCAGUGACUCUGAACUAUCAC | | siRNA23 | ShortStack |
| ghr-b1.1r1-2202 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:47194649-47194677 | - | 888 | 0.96 | AGUUGAACUCUGGAUAUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-2390 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:69704306-69704330 | - | 646 | 0.70 | UUACUCCGUUCUUUGAAUCUCUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-2556 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:85243692-85243878 | + | 400 | 0.43 | ACGGUUAAGAUUAAAGGAUAUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-5824 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:21074520-21074544 | + | 358 | 0.39 | AAAGAGGACAUAGACACAUGGCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-7368 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:25474-25661 | + | 423 | 0.46 | CGAGGACGUAGGCAAAAUUUGCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-8251 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:5928006-5928160 | + | 582 | 0.63 | CGAAGACAUAGAUGAUUUGGCUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-8356 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:6730549-6730772 | + | 524 | 0.57 | CCUUUGGACUUUUUUUCUCUUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-9298 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:56737191-56737240 | . | 185 | 0.20 | GACUGUCACGUAGGAUUACCGUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-9647 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:79476451-79476630 | + | 19,013 | 20.54 | AACCAAUGACUAUUCAUGAUUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-10205 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:92240598-92240830 | - | 4,052 | 4.38 | UGAGAUUAGUUACUGUAGCGGUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-10860 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97947032-97947154 | + | 1,691 | 1.83 | CCAGAUUUGGAUGACCCAGCAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-12287 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:8259625-8259970 | + | 1,266 | 1.37 | CCCGAUAUGUCGAUGAAUGACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-13964 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:62076070-62076241 | . | 947 | 1.02 | AUCAGAUUUUGGAAACAGUGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-15351 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11932830-11933657 | - | 8,413 | 9.09 | AACCAAUGACUAUUCAUGAUUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-15433 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:12654114-12654333 | + | 1,627 | 1.76 | UCCUCUAGAGAGACAUUAGAACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-15630 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:14727330-14727851 | + | 7,535 | 8.14 | AACCAAUGACUAUUCAUGAUUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-16970 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:27019128-27019235 | + | 4,548 | 4.91 | AUGAAGAGAUUGUAGUUCGGCCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-17130 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:28703011-28703035 | + | 399 | 0.43 | GUCUGGGUAGUGUAGUUGGUUAU | | siRNA23 | ShortStack |
| ghr-b1.1r1-17167 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:28991815-28992136 | + | 3,974 | 4.29 | UACCAGUGACUCUGAACUAUCAC | | siRNA23 | ShortStack |
| ghr-b1.1r1-17488 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:33667403-33667489 | . | 2,884 | 3.12 | CGAUGACGUAGGUAUAAUUUACC | | siRNA23 | ShortStack |
| ghr-b1.1r1-17858 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:42144930-42145013 | - | 1,311 | 1.42 | UAGUUGAGAGAACCUGUAAGGCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-18642 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:78033087-78033173 | - | 2,462 | 2.66 | CGAUAAAAUUGGAACGAUACAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-20558 | Gossypium hirsutum (Upland Cotton) 1.1 | A06:2554170-2554406 | - | 3,848 | 4.16 | AUCUAACGACUACUCUUACUUGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-20752 | Gossypium hirsutum (Upland Cotton) 1.1 | A06:3431984-3432021 | + | 606 | 0.66 | CUUACUGGGUAUGGCAUUUCGUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-21314 | Gossypium hirsutum (Upland Cotton) 1.1 | A06:9957108-9957147 | + | 445 | 0.48 | UUUGGUCGGAGACACAUCACACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-21607 | Gossypium hirsutum (Upland Cotton) 1.1 | A06:21228971-21229068 | - | 57,486 | 62.10 | GGGGAUGUAGCUCAAAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-22105 | Gossypium hirsutum (Upland Cotton) 1.1 | A06:59871101-59871190 | + | 501 | 0.54 | CGGUAUUUUACGGAAGAUGACAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-22152 | Gossypium hirsutum (Upland Cotton) 1.1 | A06:68103592-68103638 | + | 371 | 0.40 | UUUGAUAGUGUGAUCGGCCUCCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-22194 | Gossypium hirsutum (Upland Cotton) 1.1 | A06:72301616-72301653 | - | 319 | 0.35 | CUGAGUCGGAUAUAGAUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-23376 | Gossypium hirsutum (Upland Cotton) 1.1 | A06:101664162-101664355 | - | 421 | 0.46 | UGAUUGUAGUGAUUUAUUGUACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-23521 | Gossypium hirsutum (Upland Cotton) 1.1 | A06:102567822-102567845 | - | 256 | 0.28 | UUAUCCUGACAGUCAAAUAUGUAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-23528 | Gossypium hirsutum (Upland Cotton) 1.1 | A06:102601001-102601170 | + | 2,585 | 2.79 | UCGGCUGUUUGGCAGAUUUCCUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-23753 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:491854-491887 | + | 1,020 | 1.10 | CGGACUCUCAAACAGUGGAGGUA | miR8727 | siRNA23 | ShortStack |
| ghr-b1.1r1-23866 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:1009942-1010347 | - | 2,956 | 3.19 | CGAUGACGUAGGUAUAAUUUACC | | siRNA23 | ShortStack |
| ghr-b1.1r1-25129 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:9166989-9167029 | . | 120 | 0.13 | UGAUGAAAUGCAGUCUCUCUGGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-25810 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:18689684-18689957 | . | 1,669 | 1.80 | CGAGGACGUAGGUAUAAUUUACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-25811 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:18690028-18690052 | + | 93 | 0.10 | AGAGAGAAAGAUUGGUUGGGAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-25881 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:19735519-19735543 | - | 699 | 0.76 | UUCCAUGACUCUUUUGACUGUAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-27000 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:68215836-68215884 | - | 282 | 0.31 | UCCCAUUGAAGAAGAAUUCCCAU | | siRNA23 | ShortStack |
| ghr-b1.1r1-27147 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:69435615-69435750 | - | 719 | 0.78 | UUUCCUAGGUGUGAUCGGACACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-27345 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:72828657-72828688 | + | 138 | 0.15 | ACGAUAAACUAAUGUAGAAAGUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-27567 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:74124649-74124738 | + | 682 | 0.74 | AUACCUGUCACCACAUCGUGAGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-27600 | Gossypium hirsutum (Upland Cotton) 1.1 | A07:74309980-74310118 | + | 6,656 | 7.19 | GGGGAUGUAGCUCAAAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-28593 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:1876541-1876664 | . | 395 | 0.43 | CACUCUACUGAGAACUGUCUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-29714 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:15340853-15340880 | + | 1,115 | 1.20 | CCAAAACAGGUAGAGUUUGAGCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-29749 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:17024619-17024734 | - | 973 | 1.05 | AGAUACAAUUACAUCGACGGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-29777 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:18617302-18617330 | + | 292 | 0.32 | CGAAGACAUAGAUGAUUUGGCUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-29813 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:21380555-21380909 | - | 1,937 | 2.09 | AUCGAAUGACUAUUCAUCUACCG | | siRNA23 | ShortStack |
| ghr-b1.1r1-30017 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:53733295-53733863 | + | 32,519 | 35.13 | AUCGAAUGACUAUUCAUCUACUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-30282 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:73285209-73285310 | - | 3,476 | 3.76 | GAUUACUAAUCCAAGACCAGAAU | | siRNA23 | ShortStack |
| ghr-b1.1r1-30573 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:83969293-83969317 | + | 492 | 0.53 | AUCCUUAACAAAUGACUGUUUAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-30609 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:84675062-84675085 | - | 504 | 0.54 | ACAUCGGAUCAGUGUGAGAGGUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-31172 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:95255831-95255853 | - | 383 | 0.41 | UUCAAGGACUCAUUGACGCGGGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-32029 | Gossypium hirsutum (Upland Cotton) 1.1 | A08:100950073-100950227 | - | 655 | 0.71 | CUGAGUCGGAUAUAAUUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-32980 | Gossypium hirsutum (Upland Cotton) 1.1 | A09:5924513-5924631 | + | 304 | 0.33 | CAGUCUAGGGGGAUAGAACCGUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-33565 | Gossypium hirsutum (Upland Cotton) 1.1 | A09:41525904-41526016 | - | 2,415 | 2.61 | ACAAGUAGGCUGAGGUUUGACAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-34127 | Gossypium hirsutum (Upland Cotton) 1.1 | A09:54471823-54471921 | + | 368 | 0.40 | CGAGGACGUAGGCAAAAUUUGCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-35169 | Gossypium hirsutum (Upland Cotton) 1.1 | A09:65403963-65404048 | . | 351 | 0.38 | ACACCGGAGUCGAACACGAGGUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-35485 | Gossypium hirsutum (Upland Cotton) 1.1 | A09:68038461-68038718 | . | 1,987 | 2.15 | CGAGGACGUAGGUAUAAUUUACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-35863 | Gossypium hirsutum (Upland Cotton) 1.1 | A09:70932862-70932948 | - | 590 | 0.64 | CGGUAUUUUACGGAAGAUGACAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-36470 | Gossypium hirsutum (Upland Cotton) 1.1 | A10:442346-442455 | . | 752 | 0.81 | CACAUGGACGAUGUUGAAGCUCU | | siRNA23 | ShortStack |
| ghr-b1.1r1-37805 | Gossypium hirsutum (Upland Cotton) 1.1 | A10:13768598-13768624 | + | 234 | 0.25 | UAACUCGAUCUAUGGAUUCCCUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-38271 | Gossypium hirsutum (Upland Cotton) 1.1 | A10:38361324-38361398 | + | 535 | 0.58 | AACUUUCAGAACGGGUGGCCACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-38938 | Gossypium hirsutum (Upland Cotton) 1.1 | A10:73163484-73163558 | + | 708 | 0.77 | CUCAAUGAUCUGAAUGUCUCUGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-39021 | Gossypium hirsutum (Upland Cotton) 1.1 | A10:76640770-76640799 | - | 238 | 0.26 | CUGAGUCGGAUAUAGUUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-39119 | Gossypium hirsutum (Upland Cotton) 1.1 | A10:79765193-79765226 | + | 2,937 | 3.17 | AUCGAAUGACUAUUCAUCUACUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-39236 | Gossypium hirsutum (Upland Cotton) 1.1 | A10:84332254-84332401 | - | 2,204 | 2.38 | AUCUAUAAAUUUUUGAACAUCAU | | siRNA23 | ShortStack |
| ghr-b1.1r1-40210 | Gossypium hirsutum (Upland Cotton) 1.1 | A10:95479535-95479651 | - | 680 | 0.74 | CGAGGACGUAGGCAAAAUUUGCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-40481 | Gossypium hirsutum (Upland Cotton) 1.1 | A10:97983540-97983575 | - | 1,148 | 1.24 | UAGGAAAGAUCUGGUAUGUAAGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-41299 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:2520688-2520720 | + | 4,587 | 4.96 | AUUCUUGACUCACAUGGAACCAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-42202 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:9843025-9843221 | + | 1,518 | 1.64 | GAUUACUAAUCCAAGACCAGAAU | | siRNA23 | ShortStack |
| ghr-b1.1r1-42290 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:10626240-10626335 | + | 568 | 0.61 | AGAGAAAGUGAACGAAGAUAUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-42296 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:10787035-10787069 | - | 209 | 0.23 | CUAAGUCGGAUAUAGUUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-43077 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:19842227-19842250 | - | 380 | 0.41 | CUGAGUCGGAUAUAGUUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-43672 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:28008667-28008743 | - | 517 | 0.56 | UUCGAGACCUGCAUGGGCCACCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-44111 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:56669728-56669764 | + | 386 | 0.42 | CUGAGUCGGAUAUAGUUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-44236 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:64397559-64397779 | + | 367 | 0.40 | GCUAGUCGGAUAUAGUUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-44849 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:80203395-80203500 | + | 558 | 0.60 | CAGACUGAAGAUGGUGAUAGUGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-45129 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:82915902-82915933 | + | 110 | 0.12 | UGUGAAUGAAUAUGGGCAGACGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-45621 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:87458179-87458301 | - | 772 | 0.83 | GAGAAAAUGGUCGGUGUAGGAGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-45623 | Gossypium hirsutum (Upland Cotton) 1.1 | A11:87510179-87510319 | - | 1,251 | 1.35 | CCGUUAUCUGAUCGAAGUCGUUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-47007 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:5039200-5039310 | - | 405 | 0.44 | UCUAAAGUUCAAAGUGCCUGAUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-47947 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:56956719-56956928 | + | 5,269 | 5.69 | AGUUAAAAGCUCGUAGUUGGACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-48238 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:60761436-60761467 | + | 589 | 0.64 | UUAGUCUCUGUCAAGUUUGAAAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-48549 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:64047266-64047362 | + | 306 | 0.33 | CGAAAAAUUCUUGCAAAUUCUGG | | siRNA23 | ShortStack |
| ghr-b1.1r1-48550 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:64048977-64049213 | + | 2,973 | 3.21 | UAGAAGAAGAGAUCUAUAUGACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-48803 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:66497885-66497909 | + | 367 | 0.40 | UGCGAUGAAAAUAGUGAAGCUGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-48976 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:68472578-68472757 | + | 1,029 | 1.11 | UAGAUUCGGCUGUCUUUGACGAU | | siRNA23 | ShortStack |
| ghr-b1.1r1-49323 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:73910615-73910803 | + | 3,014 | 3.26 | UACCAGUGACUCUGAACUAUCAC | | siRNA23 | ShortStack |
| ghr-b1.1r1-49371 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:74258194-74258274 | + | 41,260 | 44.57 | GGGGUUGUAGCUCAAAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-49457 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:75130965-75131006 | + | 469 | 0.51 | CUAAGUCGGAUAUAAUUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-50478 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:84243882-84244018 | + | 13,768 | 14.87 | GGGGGUGUAGCUCAUAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-50653 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:85396643-85396726 | + | 1,139 | 1.23 | CUGAUUAAUUCUGUGACUUGAAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-51002 | Gossypium hirsutum (Upland Cotton) 1.1 | A12:87352766-87352789 | - | 514 | 0.56 | CAGACUAACACAUCUCCUGGCAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-52034 | Gossypium hirsutum (Upland Cotton) 1.1 | A13:5537092-5537135 | - | 346 | 0.37 | AGGGCGUGGGAGGAGCCUGGGUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-52092 | Gossypium hirsutum (Upland Cotton) 1.1 | A13:6068305-6068353 | - | 520 | 0.56 | GUAGAAGACAAUGCAGCUGUACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-52535 | Gossypium hirsutum (Upland Cotton) 1.1 | A13:24090378-24090404 | + | 249 | 0.27 | UACGAGACUGUUUGAAAGCGGCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-52820 | Gossypium hirsutum (Upland Cotton) 1.1 | A13:46618228-46618400 | - | 1,125 | 1.22 | UAGGAUGGUGUGGGAGGUGCUUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-52947 | Gossypium hirsutum (Upland Cotton) 1.1 | A13:52434022-52434079 | + | 260 | 0.28 | UUUAAAUGAUAUCGGACACCACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-52949 | Gossypium hirsutum (Upland Cotton) 1.1 | A13:52562867-52562943 | - | 609 | 0.66 | UGAAAGGAUGGAAAGGGCUUAAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-54214 | Gossypium hirsutum (Upland Cotton) 1.1 | A13:75174873-75175041 | - | 2,112 | 2.28 | UACCAGUGACUCUGAACUAUCAC | | siRNA23 | ShortStack |
| ghr-b1.1r1-54215 | Gossypium hirsutum (Upland Cotton) 1.1 | A13:75175091-75175111 | . | 103 | 0.11 | CAGACUCGGGAAAGAUGAAUGUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-54836 | Gossypium hirsutum (Upland Cotton) 1.1 | A13:78575207-78575275 | . | 284 | 0.31 | UAAUUUUGUGAACAAUGAUCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-55461 | Gossypium hirsutum (Upland Cotton) 1.1 | D01:1645913-1645992 | - | 658 | 0.71 | GUUGUUGUGGUGUAGUGGUUAUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-57374 | Gossypium hirsutum (Upland Cotton) 1.1 | D01:25241528-25241616 | . | 639 | 0.69 | AUUAGAUACUGUAGUGUAAGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-58300 | Gossypium hirsutum (Upland Cotton) 1.1 | D01:54030170-54030269 | - | 263 | 0.28 | UUGGGUUGGUGCUUCAAUGCUCU | | siRNA23 | ShortStack |
| ghr-b1.1r1-59602 | Gossypium hirsutum (Upland Cotton) 1.1 | D01:61102128-61102206 | - | 18,903 | 20.42 | GGGGAUGUAGCUCAGAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-60546 | Gossypium hirsutum (Upland Cotton) 1.1 | D02:4855704-4855780 | + | 189 | 0.20 | UAUGAGAACUCCCAUGUAAGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-61374 | Gossypium hirsutum (Upland Cotton) 1.1 | D02:9923759-9923791 | + | 81 | 0.09 | CGACGGUGAAGUAAGACCAAGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-62277 | Gossypium hirsutum (Upland Cotton) 1.1 | D02:34506466-34506499 | + | 266 | 0.29 | UAAGCGAAUUUAGUCUGUGAACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-62619 | Gossypium hirsutum (Upland Cotton) 1.1 | D02:43448612-43448721 | + | 863 | 0.93 | AAGCAUCAUACCGCUGAUCGUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-63111 | Gossypium hirsutum (Upland Cotton) 1.1 | D02:54217861-54217884 | + | 394 | 0.43 | CCUAGUGCGGAGAAGACUUCAGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-63924 | Gossypium hirsutum (Upland Cotton) 1.1 | D02:63485341-63485461 | - | 1,803 | 1.95 | AUCAAGAAUUCCGAAUAUGAACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-64663 | Gossypium hirsutum (Upland Cotton) 1.1 | D02:66556994-66557090 | - | 611 | 0.66 | CUGAGUCGGAUAUAGUUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-65238 | Gossypium hirsutum (Upland Cotton) 1.1 | D03:2084501-2084769 | + | 2,074 | 2.24 | ACGAGGAAGAUGUAGCUGGUGCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-65357 | Gossypium hirsutum (Upland Cotton) 1.1 | D03:2581610-2581677 | - | 388 | 0.42 | UUUUCGGCAGAGAGAGAGAGCUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-66411 | Gossypium hirsutum (Upland Cotton) 1.1 | D03:24427306-24427365 | - | 210 | 0.23 | AGAGGUGUCGGAACGGUGAUUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-67351 | Gossypium hirsutum (Upland Cotton) 1.1 | D03:38114455-38114479 | - | 96 | 0.10 | CUGACGUGGAUGAACAGUUUAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-68586 | Gossypium hirsutum (Upland Cotton) 1.1 | D03:45220171-45220282 | + | 568 | 0.61 | AUCUGUCAAGACUUGGAUUGAGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-69781 | Gossypium hirsutum (Upland Cotton) 1.1 | D04:5391696-5392003 | + | 6,070 | 6.56 | AACCAAUGACUAUUCAUGAUUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-70334 | Gossypium hirsutum (Upland Cotton) 1.1 | D04:10534424-10534569 | + | 336 | 0.36 | ACAGCGUGGUAGAAUAAUUACAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-71087 | Gossypium hirsutum (Upland Cotton) 1.1 | D04:31540537-31540769 | + | 450 | 0.49 | AUUGAAUGACUAUUCAUCUACUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-73250 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:929566-929590 | + | 416 | 0.45 | AAUCGAGACUUGCGGCAGAAACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-74494 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:9420581-9420655 | + | 1,573 | 1.70 | CCUGAGGCAGUGGUACAAGCGAU | | siRNA23 | ShortStack |
| ghr-b1.1r1-74533 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:9712903-9712925 | + | 226 | 0.24 | AUAUGCUGAUAUACUCUUUCUAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-75997 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:20616307-20616334 | - | 484 | 0.52 | GAGAGAAAGAUUGGUUGGGAUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-77874 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:36956881-36957136 | . | 953 | 1.03 | UUGGAAAACUUUGAAAGGCCAUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-77877 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:36960903-36961130 | - | 2,694 | 2.91 | UUCGUUCCACGCUCACCGCACCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-78084 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:45326460-45326483 | + | 293 | 0.32 | GUAACAGGAACGGAGCAAAGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-78795 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:54821563-54821870 | - | 2,695 | 2.91 | UCUUUGGGGUCUUUAGAAUCUAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-79310 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:59321454-59321563 | - | 694 | 0.75 | CGAGGACGUAGGUAUAAUUUACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-79456 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:60066904-60067067 | . | 121 | 0.13 | ACCGAACUUACUGUAGCCAUGGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-79535 | Gossypium hirsutum (Upland Cotton) 1.1 | D05:60984332-60984468 | + | 1,027 | 1.11 | CAGGUUUACGAAUUUCUCUCCGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-81615 | Gossypium hirsutum (Upland Cotton) 1.1 | D06:15300078-15300365 | + | 3,899 | 4.21 | UAUGAUGACUAAGGUGGUAACAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-81969 | Gossypium hirsutum (Upland Cotton) 1.1 | D06:21715508-21715544 | + | 24,163 | 26.10 | AACCAAUGACUAUUCAUGAUUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-82118 | Gossypium hirsutum (Upland Cotton) 1.1 | D06:24846782-24846899 | - | 32,486 | 35.09 | AUCGAAUGACUAUUCAUCUACUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-82216 | Gossypium hirsutum (Upland Cotton) 1.1 | D06:27935637-27935725 | - | 550 | 0.59 | GUUGUGAUGGACAGAUGACGGUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-82252 | Gossypium hirsutum (Upland Cotton) 1.1 | D06:29596914-29597031 | + | 1,138 | 1.23 | CGACACCUCUGAUACCAAGCUGG | | siRNA23 | ShortStack |
| ghr-b1.1r1-82585 | Gossypium hirsutum (Upland Cotton) 1.1 | D06:45706598-45706731 | - | 657 | 0.71 | UCCUCGUGCGUAACCGACUCCCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-82595 | Gossypium hirsutum (Upland Cotton) 1.1 | D06:46017562-46017685 | - | 855 | 0.92 | AGAGGUGUCGGAACGGUGAUUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-82671 | Gossypium hirsutum (Upland Cotton) 1.1 | D06:49031882-49031909 | - | 481 | 0.52 | GUAACGAGAACAGAGCAAAGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-83223 | Gossypium hirsutum (Upland Cotton) 1.1 | D06:57631402-57631738 | - | 17,653 | 19.07 | GGGGAUGUAGCUCAGAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-87059 | Gossypium hirsutum (Upland Cotton) 1.1 | D07:15882149-15882173 | - | 423 | 0.46 | UUCCAUGACUCUUUUGACUAUAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-87230 | Gossypium hirsutum (Upland Cotton) 1.1 | D07:17770370-17770395 | . | 95 | 0.10 | UUAGUGAUCUUAAGUGUAGUUUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-87633 | Gossypium hirsutum (Upland Cotton) 1.1 | D07:22456707-22456953 | - | 2,237 | 2.42 | GUUAUUCUAUUCCACCUCUUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-88336 | Gossypium hirsutum (Upland Cotton) 1.1 | D07:37988423-37988445 | - | 318 | 0.34 | UUUCUUGAUUGGGCUUGGAAUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-88434 | Gossypium hirsutum (Upland Cotton) 1.1 | D07:42480462-42480497 | + | 534 | 0.58 | GAUUUGUUGUUGCAGGAGGGCUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-88503 | Gossypium hirsutum (Upland Cotton) 1.1 | D07:43276676-43276960 | - | 30,675 | 33.14 | AUCGAAUGACUAUUCAUCUACUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-88964 | Gossypium hirsutum (Upland Cotton) 1.1 | D07:49631658-49631737 | + | 416 | 0.45 | UACUGUAGCGUGAGACAAAAAGC | miR5207 | siRNA23 | ShortStack |
| ghr-b1.1r1-89513 | Gossypium hirsutum (Upland Cotton) 1.1 | D07:52624500-52624552 | + | 238 | 0.26 | UUGAGGAAUCCGUAGGGAACGUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-90498 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:2548855-2548920 | + | 498 | 0.54 | UGCGAUGAAAAUAGUGAAGCUGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-91204 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:6168679-6168725 | - | 727 | 0.79 | AAUACUUGACUGGAAUAACUUCU | | siRNA23 | ShortStack |
| ghr-b1.1r1-91307 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:6886636-6887020 | - | 18,830 | 20.34 | AUCGAAUGACUAUUCAUCUACUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-91823 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:15281208-15281270 | + | 195 | 0.21 | CUAUCGAAGCAGUUGACUCCACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-91874 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:15485156-15485325 | + | 1,387 | 1.50 | CCGGAGGUAGGGUCCAGCGGUCG | | siRNA23 | ShortStack |
| ghr-b1.1r1-91987 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:19127842-19127864 | - | 257 | 0.28 | UUUCCGAAAACUAGUGAACAAGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-92126 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:25320632-25320676 | - | 207 | 0.22 | AGCGACUAGUACUCAGACUGGGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-92828 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:46455226-46455278 | + | 254 | 0.27 | GUUGAUAGUGUGGACGAUCUCCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-93228 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:50768784-50768821 | - | 276 | 0.30 | CUGAGUCGGAUAUAGUUGGCAUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-93430 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:53412909-53412933 | - | 536 | 0.58 | AUUGAUCAGUGGUAGCUUCGGCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-93575 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:54827666-54827737 | + | 494 | 0.53 | CUCACGAGCUAUUUGAAUAAAGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-94569 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:61765574-61765602 | + | 1,068 | 1.15 | AAGACUGAGAAAAGAUGAAAACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-95204 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:64995602-64995730 | - | 496 | 0.54 | UCUGCUAAAAUUGCUGGAACCGG | | siRNA23 | ShortStack |
| ghr-b1.1r1-95235 | Gossypium hirsutum (Upland Cotton) 1.1 | D08:65106386-65106414 | - | 1,649 | 1.78 | UUCCUUGACGGUCGCUGUUACAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-95783 | Gossypium hirsutum (Upland Cotton) 1.1 | D09:4155891-4155947 | + | 472 | 0.51 | UUUUAAGAAAUAAAGAACUGGCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-96939 | Gossypium hirsutum (Upland Cotton) 1.1 | D09:30674445-30674788 | - | 2,559 | 2.76 | AAGCAUCAUACCGCUGAUCGUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-96988 | Gossypium hirsutum (Upland Cotton) 1.1 | D09:30936355-30936621 | + | 37,395 | 40.39 | CCGACCUUAGCUCAGUUGGUAGA | miR6478 | siRNA23 | ShortStack |
| ghr-b1.1r1-97608 | Gossypium hirsutum (Upland Cotton) 1.1 | D09:34863440-34863535 | . | 124 | 0.13 | CUACGUCGCCACCACAAGAGAGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-98949 | Gossypium hirsutum (Upland Cotton) 1.1 | D09:43149699-43149726 | - | 86 | 0.09 | UCUAACUCAAUUGUUCACCUCAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-99203 | Gossypium hirsutum (Upland Cotton) 1.1 | D09:44505396-44505466 | - | 844 | 0.91 | UUUUAAGCAAUGAAGAACUGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-99537 | Gossypium hirsutum (Upland Cotton) 1.1 | D09:46227306-46227367 | + | 1,565 | 1.69 | UUGACUAAGCUUUUGAUUUUUAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-100372 | Gossypium hirsutum (Upland Cotton) 1.1 | D09:50852847-50853029 | + | 2,076 | 2.24 | UCUUUCAUUAGCGUUUAGGACAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-100731 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:1758868-1758902 | + | 348 | 0.38 | AUUCAAGUCCAACUGUUAACACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-100961 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:2589544-2589588 | + | 2,505 | 2.71 | CUAUGAUCGAAAACUAGACUGGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-101345 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:4459919-4460183 | - | 3,825 | 4.13 | AAGUGACUGGUAAAUGCUCGACC | | siRNA23 | ShortStack |
| ghr-b1.1r1-102599 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:16990650-16990761 | - | 417 | 0.45 | CGAACUUGAUGAUACCCCGAUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-102633 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:17411264-17411348 | - | 804 | 0.87 | AAGAGGAGCUAAGGUAGAGGGUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-102757 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:18461697-18461715 | - | 159 | 0.17 | GAUUUGUUGCUACAGGAGGGCUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-103397 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:29483426-29483713 | - | 1,889 | 2.04 | UCUUUGGGGUCUUUAGAAUCUAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-103498 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:32924261-32924372 | - | 511 | 0.55 | GACAGUCGAGUCUAUGAGGUGGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-103524 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:33813966-33814057 | . | 312 | 0.34 | CAAACGGCUCUAAUCUCCCCUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-104256 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:52151605-52151629 | - | 340 | 0.37 | CUUGAUCUUGAUGGACAUCCACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-104693 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:56672101-56672125 | + | 210 | 0.23 | ACAUAGAUGUGAUUGACUGGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-105084 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:58705866-58705995 | + | 332 | 0.36 | CAGGCAUGAGUGAGCAGUGAGUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-105110 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:59171362-59171498 | . | 1,619 | 1.75 | GGAGAUCUAUAUGACUCAGCCUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-105118 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:59214037-59214101 | + | 618 | 0.67 | CUAUACUGGAGAAAGUUCGAUGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-105139 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:59535637-59535701 | + | 281 | 0.30 | UCUGCUAAAAUUGCUGGAACCGG | | siRNA23 | ShortStack |
| ghr-b1.1r1-105253 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:60566893-60566996 | + | 769 | 0.83 | UUUGGCUUUGAUGCUUUGGGGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-105259 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:60573307-60573389 | + | 3,357 | 3.63 | CCGAGAAUCUUCCUGGCCUCACC | | siRNA23 | ShortStack |
| ghr-b1.1r1-105336 | Gossypium hirsutum (Upland Cotton) 1.1 | D10:61171116-61171229 | . | 480 | 0.52 | UGAGAUUAGAUACUGUAGCGAUU | miR5207 | siRNA23 | ShortStack |
| ghr-b1.1r1-105854 | Gossypium hirsutum (Upland Cotton) 1.1 | D11:886100-886310 | . | 1,324 | 1.43 | UCCAAUAGGGUCGGAAGCGUGUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-106189 | Gossypium hirsutum (Upland Cotton) 1.1 | D11:2492040-2492063 | + | 562 | 0.61 | AUUCUUGACUCACAUGAAACCAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-108644 | Gossypium hirsutum (Upland Cotton) 1.1 | D11:18744916-18744993 | + | 288 | 0.31 | UAUGAAAUUGACUUAGGAUGUUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-108707 | Gossypium hirsutum (Upland Cotton) 1.1 | D11:19114012-19114053 | - | 734 | 0.79 | UUCUGUCUAAGGAAAGACUUGGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-108992 | Gossypium hirsutum (Upland Cotton) 1.1 | D11:22379065-22379118 | + | 442 | 0.48 | AUUAGAUACUGUAGUGUGAGACG | | siRNA23 | ShortStack |
| ghr-b1.1r1-109801 | Gossypium hirsutum (Upland Cotton) 1.1 | D11:42084393-42084464 | - | 352 | 0.38 | GAACUUAUUAGAUACCAUCGAUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-109917 | Gossypium hirsutum (Upland Cotton) 1.1 | D11:45703291-45703406 | + | 1,158 | 1.25 | AAAAGGGAAGACUCCGCAAGAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-110039 | Gossypium hirsutum (Upland Cotton) 1.1 | D11:47170799-47170831 | + | 3,943 | 4.26 | AUCGAAUGACUAUUCAUCUACUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-111174 | Gossypium hirsutum (Upland Cotton) 1.1 | D11:59333963-59333988 | + | 612 | 0.66 | CAAGCUUAAGAUAGAACCCGGUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-111888 | Gossypium hirsutum (Upland Cotton) 1.1 | D11:65197805-65198293 | + | 9,667 | 10.44 | UGACCCAUUAUCAGCUCUAGACC | | siRNA23 | ShortStack |
| ghr-b1.1r1-113532 | Gossypium hirsutum (Upland Cotton) 1.1 | D12:12537054-12537268 | . | 436 | 0.47 | GUUCGGUUGUUGCAGUAGACACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-113805 | Gossypium hirsutum (Upland Cotton) 1.1 | D12:19869498-19869776 | + | 42,314 | 45.71 | CGGACCAUAACACAAGAAGCACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-113898 | Gossypium hirsutum (Upland Cotton) 1.1 | D12:25020310-25020434 | - | 527 | 0.57 | CAAACCGAACUUAAACAAGCUUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-114654 | Gossypium hirsutum (Upland Cotton) 1.1 | D12:38206333-38206419 | - | 640 | 0.69 | UCUGCUAAAAUUGCUGGAACCGG | | siRNA23 | ShortStack |
| ghr-b1.1r1-114888 | Gossypium hirsutum (Upland Cotton) 1.1 | D12:40115401-40115813 | + | 93,140 | 100.61 | GGGGAUGUAGCUCAAAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-115025 | Gossypium hirsutum (Upland Cotton) 1.1 | D12:40939895-40940004 | + | 610 | 0.66 | AUUAGAUACUGUAGCGUGAGACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-116680 | Gossypium hirsutum (Upland Cotton) 1.1 | D12:53763953-53764039 | + | 341 | 0.37 | UUGACUGUUUUUCUUCAAAAAUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-117318 | Gossypium hirsutum (Upland Cotton) 1.1 | D12:57260024-57260126 | + | 1,318 | 1.42 | CUGAUUAAUUCUGUGACUUGAAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-117682 | Gossypium hirsutum (Upland Cotton) 1.1 | D12:58999200-58999224 | - | 543 | 0.59 | CAGACUAACACAUCUCCUGGCAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-118382 | Gossypium hirsutum (Upland Cotton) 1.1 | D13:2687352-2687529 | + | 25,479 | 27.52 | GGGGAUGUAGCUCAGAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-118442 | Gossypium hirsutum (Upland Cotton) 1.1 | D13:2895141-2895196 | + | 258 | 0.28 | UUACUGGAUAUGAUUCUCUUUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-119498 | Gossypium hirsutum (Upland Cotton) 1.1 | D13:13808704-13808774 | - | 277 | 0.30 | UUCAAAGAUAUGAUCAAGGCUAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-119633 | Gossypium hirsutum (Upland Cotton) 1.1 | D13:17169958-17170101 | - | 372 | 0.40 | CUUGAUCAUGAUGGACAUCCACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-119916 | Gossypium hirsutum (Upland Cotton) 1.1 | D13:29665133-29665178 | . | 670 | 0.72 | UCUGGACUUUGACUUUGAUCUCCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-120772 | Gossypium hirsutum (Upland Cotton) 1.1 | D13:45950659-45950777 | - | 1,069 | 1.16 | UCUUUGGGGUCUUUAGAAUCUAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-120847 | Gossypium hirsutum (Upland Cotton) 1.1 | D13:47087536-47087808 | - | 417 | 0.45 | AGGGAGAAGGUGAUACCACUGCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-121273 | Gossypium hirsutum (Upland Cotton) 1.1 | D13:51132766-51132789 | - | 368 | 0.40 | AUCUAUAAAUUUUUGAACAUCAU | | siRNA23 | ShortStack |
| ghr-b1.1r1-123127 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold101094:31-142 | - | 329 | 0.36 | UCCACUGCGAUUGUAGGACGAAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-123622 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold10423:4897-4920 | - | 222 | 0.24 | UCCCAGUGAGGAAGAAUUCCCAU | | siRNA23 | ShortStack |
| ghr-b1.1r1-123671 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold105112:415-455 | - | 716 | 0.77 | CUCUCUUCCCUGGGAAUUGAACC | | siRNA23 | ShortStack |
| ghr-b1.1r1-123789 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold107503:1-65 | - | 624 | 0.67 | CUUGAGGGUAUAAUAGUAGUAUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-124291 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold11816:417-665 | - | 568 | 0.61 | UUGAUCUUGGAUAGUUGAGUCUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-124661 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold1219_A05:73733-73787 | + | 316 | 0.34 | AGAGAAAGUGAACGAAGAUAUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-125030 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold12470:388-1181 | + | 1,305 | 1.41 | CCAUGGGGUCGAACUGGAUGACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-125669 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold13155:580-608 | + | 1,569 | 1.70 | UUCCUUGACGGUCGCUGUUACAG | | siRNA23 | ShortStack |
| ghr-b1.1r1-125767 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold1328_A06:483633-483655 | - | 440 | 0.48 | AGGGAUCGAUAUGAGACAUGGUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-126141 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold139638:316-340 | - | 308 | 0.33 | AAGGAUCUUAUCUCUCUGAAGUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-126414 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold1483_A06:49653-49699 | - | 568 | 0.61 | GUUUUGGAUUAUCUUAUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-126621 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold155612:216-238 | + | 470 | 0.51 | CUGAGUCGGAUAUAAUUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-126643 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold156460:1-51 | + | 540 | 0.58 | UCCUACCAGAUGAAGAGCUUAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-127019 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold16875:364-496 | + | 532 | 0.58 | AUGGCAUGUAUAGGACUACCCUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-127283 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold181446:199-296 | - | 10,568 | 11.42 | GAGAAAAUGGUCGGUGUAGGAGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-127375 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold1832_A07:704914-705251 | - | 2,034 | 2.20 | CUUGAGGGUAUAAUAGUAGUAUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-127528 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold18765:858-943 | . | 609 | 0.66 | UUCAGGAGAGACUGCAUUUCUUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-128551 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold2119_A08:699034-699180 | - | 7,180 | 7.76 | ACCUGGGGCUGUAGUAUGUUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-128659 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold217937:188-211 | - | 725 | 0.78 | GGUGUGUACAAAGGGCAGGGAUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-128838 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold22645:1200-1223 | + | 570 | 0.62 | CGACGUCGAAAUUAUCCACCAUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-129461 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold2306_A09:57710-57845 | - | 3,369 | 3.64 | AUCUAACGACUACUCUUACUUGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-129873 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold2434_A09:318586-318711 | + | 2,748 | 2.97 | CAAAGGGCAGGGACGUAGUCAAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-129948 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold2434_A09:526199-526225 | + | 421 | 0.46 | CCGAAAGAUGGUGAACUAUGCCG | | siRNA23 | ShortStack |
| ghr-b1.1r1-129976 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold2439_A09:4254-4406 | + | 74,272 | 80.23 | GGGGAUGUAGCUCAGAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-130350 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold253998:1-182 | . | 1,377 | 1.49 | CGACGGGUUCGGGACUGGGACCU | | siRNA23 | ShortStack |
| ghr-b1.1r1-130359 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold254469:179-203 | - | 358 | 0.39 | CCGUUUGUUGUGGGUCAUGGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-130513 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold2638_A10:160365-160511 | - | 2,397 | 2.59 | AACCAAUGACUAUUCAUGAUUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-130544 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold26690:1-141 | - | 8,355 | 9.03 | GUCUGGGUGGUGUAGUUGGUUAU | | siRNA23 | ShortStack |
| ghr-b1.1r1-131637 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold3047_A11:136939-136982 | - | 142 | 0.15 | UUCCUGGAGUGUGCUUUGACAUC | | siRNA23 | ShortStack |
| ghr-b1.1r1-131798 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold30_A01:115321-115390 | - | 503 | 0.54 | AUUUGAUCUAACGUACAAGGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-132219 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold3390_A12:69909-70040 | + | 2,155 | 2.33 | GGGGAUGUAGCUCAGAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-132488 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold3415_A13:184741-184934 | + | 2,709 | 2.93 | CACUCGUGAAUGUAGAAUAAAGU | | siRNA23 | ShortStack |
| ghr-b1.1r1-132515 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold3418_A13:14751-14806 | + | 557 | 0.60 | AUAAGAUUUUUCUUCAAACUGGG | | siRNA23 | ShortStack |
| ghr-b1.1r1-134369 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold3988_D04:20710-20805 | - | 2,400 | 2.59 | UCUUUGGGGUCUUUAGAAUCUAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-134370 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold3988_D04:21827-21853 | - | 278 | 0.30 | UAUUCUACUUCAUGGAAAGUCGG | | siRNA23 | ShortStack |
| ghr-b1.1r1-134512 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold4009_D05:11473-11670 | . | 118 | 0.13 | CUACGUCGCCACCAUAAGAGAGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-134585 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold40585:31-78 | - | 2,137 | 2.31 | UCUUUCGAUCUUUCGGGAACCUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-134965 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold4091_D06:69884-69947 | . | 4,078 | 4.41 | UACUCUGGAAGAAAGAACGACAA | | siRNA23 | ShortStack |
| ghr-b1.1r1-135426 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold417_A02:617821-618022 | + | 10,988 | 11.87 | AACCAAUGACUAUUCAUGAUUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-135798 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold4274_D08:23369-23493 | + | 2,864 | 3.09 | AUCGAAUGACUAUUCAUCUACUG | | siRNA23 | ShortStack |
| ghr-b1.1r1-136077 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold4326_D09:71768-71792 | + | 201 | 0.22 | AGAUACAUUUACAUCGACGGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-136408 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold4401_D10:22408-22680 | . | 988 | 1.07 | CACUGUAGCGUGAGACAAAAAGU | miR5207 | siRNA23 | ShortStack |
| ghr-b1.1r1-136981 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold4509_D11:19200-19277 | - | 534 | 0.58 | UUUUUCUUGGACUGUGUAUCUCC | | siRNA23 | ShortStack |
| ghr-b1.1r1-137399 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold4584_D12:18947-19031 | - | 6,275 | 6.78 | GGGGGUGUAGCUCAUAUGGUAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-138270 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold4815:18535-18610 | - | 374 | 0.40 | UUUGGAUGGGGGCGACGAUGCG | | siRNA23 | ShortStack |
| ghr-b1.1r1-138541 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold4891:1018-1087 | + | 3,241 | 3.50 | CUGAGUCGGAUAUAGUUGGCAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-139653 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold53068:345-368 | - | 514 | 0.56 | CUCAGGACAGCAGCAGUAACAUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-139796 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold5435:5351-5514 | - | 3,094 | 3.34 | AUCUCGAAAGAUCUCACAACUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-140079 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold5793:14300-14363 | - | 1,309 | 1.41 | AGAAUUUGGGCUUUUGUGACUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-140103 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold5816:14138-14190 | + | 352 | 0.38 | CAAGACUGAUAGGAUUAAAACU | | siRNA23 | ShortStack |
| ghr-b1.1r1-140461 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold63005:400-673 | - | 13,003 | 14.05 | AACCAAUGACUAUUCAUGAUUCU | | siRNA23 | ShortStack |
| ghr-b1.1r1-140680 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold6629:5187-5278 | + | 555 | 0.60 | AUCUCGAAAGAUCUCACAACUCG | | siRNA23 | ShortStack |
| ghr-b1.1r1-140844 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold6915:2304-2328 | - | 277 | 0.30 | UUCAAGGACUCAUUGACGCGGGC | | siRNA23 | ShortStack |
| ghr-b1.1r1-140982 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold7102:4554-4684 | . | 494 | 0.53 | UUUAUAAAGAAAUUUGAUCGUCA | | siRNA23 | ShortStack |
| ghr-b1.1r1-141177 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold73498:268-316 | + | 824 | 0.89 | UUUUAAGCAAUGAAGAACUGACA | | siRNA23 | ShortStack |
| ghr-b1.1r1-141651 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold7913:2603-2642 | - | 341 | 0.37 | GAUUUGUUGUUACAGGAGGGCUA | | siRNA23 | ShortStack |
| ghr-b1.1r1-141745 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold8139:5567-5827 | - | 699 | 0.76 | CAGGCUCGGACAUCUUACCCAGA | | siRNA23 | ShortStack |
| ghr-b1.1r1-142136 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold9045:1482-1513 | - | 365 | 0.39 | UUUAAUGUAUUUCUCUUAACUUU | | siRNA23 | ShortStack |
| ghr-b1.1r1-142347 | Gossypium hirsutum (Upland Cotton) 1.1 | scaffold96374:1-71 | - | 1,069 | 1.16 | AGUUGUAGUUGAUAGUGUGGACA | | siRNA23 | ShortStack |
Data from Lunardon et al. (2020)