| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| ghr-b1.1r1-8 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:63647-63810 | + | 280 | 0.30 | AUCAUCUGCCUGACAUCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-11 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:125726-125978 | - | 381 | 0.41 | AUUCUGGGUUGGACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:126044-126476 | - | 1,492 | 1.61 | AACGACAAGGCUUGGGAUGACCAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:126571-126908 | - | 1,043 | 1.13 | AAGGACUAUGUGGAUCCUCCACCGGCACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-84 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:608044-608307 | . | 1,309 | 1.41 | AAUACCAUCGUCUAAUAAGGAACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-88 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:614819-615427 | - | 281 | 0.30 | CGAGAUCGGCUACUUACAAAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-105 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:678101-678122 | + | 419 | 0.45 | CUGGGAAUUGAACUUUGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-217 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:1292853-1292896 | - | 198 | 0.21 | GCUGGAAUAGCUCAGUUGGUUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-234 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:1351475-1351492 | + | 144 | 0.16 | CUCGGUGGAACCUCCG | miR9995 | OtherRNA | ShortStack |
| ghr-b1.1r1-261 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:1472393-1473278 | - | 28,514 | 30.80 | CCGGACGGAGAUUGGCCCUCGAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-281 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:1528434-1528845 | + | 4,348 | 4.70 | GUUGCUCAUGCAGGAGGAUGUGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-293 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:1641054-1641702 | - | 109,004 | 117.75 | GCGGAAGCGAGAAUGUCGGCUUGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-381 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:2070799-2070816 | - | 790 | 0.85 | UCCGGGCGACGCCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-417 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:2203680-2203757 | - | 678 | 0.73 | GUAGAUGAUGAAGUAUGCACUGGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-418 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:2204084-2204726 | - | 431,307 | 465.89 | UAUACCGUGCCCAUGACU | miR2947 | OtherRNA | ShortStack |
| ghr-b1.1r1-541 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3085616-3086133 | - | 583 | 0.63 | CACUGUAAGCAACCUUUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-542 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3086226-3086468 | - | 330 | 0.36 | GCUUGGACUUUCUUCCUACUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-545 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3090166-3090747 | - | 757 | 0.82 | AGACAAUCUUCUCCGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-551 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3120294-3120669 | + | 835 | 0.90 | UUUGUUGACAUUCUUGGUUCUUAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-552 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3120950-3121195 | + | 1,487 | 1.61 | AUCUUCGAUGUCGAAUCUCAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-553 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3121298-3121518 | + | 466 | 0.50 | AAGCUGAUGACUCGGGUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-554 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3122163-3122653 | + | 2,163 | 2.34 | GCCCCGAGACUGUAGAGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-561 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3143200-3143460 | + | 768 | 0.83 | UCUUCGAUGUCGAAUCUCAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-562 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3144072-3144123 | + | 223 | 0.24 | AUAGCGGUAGAGGCUGGAGCAUCCGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-563 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3144217-3144324 | + | 375 | 0.41 | AUGUUUUUAAAGCUUUGGCAUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-564 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3144501-3144862 | + | 1,456 | 1.57 | CCCCGAGACUGUAGAGCGCUAUAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-613 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3712477-3712632 | - | 792 | 0.86 | UUGGCCGUUCCAAAUGAGUUCUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-614 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3712712-3712869 | - | 641 | 0.69 | AAUUUUCUUACUCUUGCAAGGUUCUCAGAAAGGUAAUUAUACAUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-630 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:3876006-3876045 | + | 237 | 0.26 | GAAGAUGAUGGGUGUGGGUUUGAGAAUAAUCUGAUUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-693 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:4580174-4580359 | - | 2,570 | 2.78 | GCAUGGCUGUCGUCAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-701 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:4734707-4734723 | - | 304 | 0.33 | UUAUUCCUGAGCCUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-753 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:5367850-5368604 | . | 4,001 | 4.32 | ACAUCCUCUGAAUUUAUUGUGUGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-805 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:5986660-5987583 | + | 830 | 0.90 | ACGAAGCUUGUGAGUCGGGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-821 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:6073454-6073483 | . | 48 | 0.05 | CUACCAAUCUUGCCUUGUAGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-835 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:6208768-6209416 | - | 6,291 | 6.80 | UUAUCCGGAAUGAUUGGGCGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-838 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:6216296-6216547 | . | 1,428 | 1.54 | CUUAUGGACCCGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-841 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:6235515-6235851 | + | 2,680 | 2.90 | GUUGAGGUCUGAACCGAUUGACGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-872 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:6487158-6487186 | + | 239 | 0.26 | GCUCGGACUGUUUGGUGGCCAUAAUUCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-880 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:6539865-6539890 | + | 735 | 0.79 | GUUAUUCUAUUCCACCUCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-982 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:7503178-7503265 | - | 2,152 | 2.33 | AACAUUUUCUGAGCCUU | miR1446 | OtherRNA | ShortStack |
| ghr-b1.1r1-993 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:7672101-7672605 | . | 12,832 | 13.86 | CUCGAGCGGCAGGAACUUUUGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1087 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:8331765-8331792 | - | 120 | 0.13 | GUACUAGUUGAUGAGAGUUACUCCGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-1095 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:8452848-8453288 | - | 3,027 | 3.27 | GUAGACGUGCCGGAGUGGUUAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1108 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:9055825-9056119 | + | 326 | 0.35 | AUGGAUACUCUGAGAUAGAACG | | OtherRNA | ShortStack |
| ghr-b1.1r1-1115 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:9131612-9131812 | + | 2,133 | 2.30 | AAAGGAUCGUCAACAAGGGCGUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1119 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:9236890-9237275 | . | 1,407 | 1.52 | AAGCAAGGCUGUGGGUUAUCAACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1167 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:9951527-9951858 | + | 25,200 | 27.22 | CCACUCUCAACACCA | miR7101 | OtherRNA | ShortStack |
| ghr-b1.1r1-1191 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:10364232-10364846 | + | 724 | 0.78 | CACCGGAUCAACAGAGGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1195 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:10401378-10401726 | + | 280 | 0.30 | CCAACGUGAAGCUGUUCAACGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1219 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:10623914-10623932 | - | 202 | 0.22 | UUUACUAUAGCUUUGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1251 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:10970863-10970940 | - | 6,748 | 7.29 | GAUGAGCAAUGAAUCUGAGGGAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1252 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:10971288-10971377 | - | 5,651 | 6.10 | AUACCGUUUCUGAUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-1279 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:11173136-11173154 | - | 485 | 0.52 | UUUUUAAAUCACAGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1286 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:11205064-11205084 | - | 284 | 0.31 | AUGUGGUUUAAUUCGAAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1377 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:12196495-12196512 | - | 79 | 0.09 | GCUCCUAUCUGAUGACG | | OtherRNA | ShortStack |
| ghr-b1.1r1-1385 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:12286195-12286300 | + | 1,038 | 1.12 | AGAAAGGGACAUAACUUUGGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1402 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:13256856-13256917 | . | 718 | 0.78 | UUAGGUAAAUCCGGGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1426 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:13677114-13677494 | + | 4,559 | 4.93 | UAUUUGAAUAGGAAGAUCUGAUGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1427 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:13677629-13677664 | + | 118 | 0.13 | UGCCCAGGGAUGGAAAACUCAUUGAAUGGAGCAGGACUGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1440 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:13744663-13744680 | - | 1,025 | 1.11 | UUUGUUGGAUGCCCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1494 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:14334029-14334451 | - | 1,349 | 1.46 | AAAUCUGGGUCCUGGCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-1505 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:14570627-14570698 | + | 1,149 | 1.24 | AGGAGGACGAUAGACCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1506 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:14589156-14589235 | + | 435 | 0.47 | CUGUUGUCGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-1510 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:15285121-15285136 | + | 202 | 0.22 | UGGACAAUCACUUUC | miR399 | OtherRNA | ShortStack |
| ghr-b1.1r1-1537 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:16273354-16273390 | - | 181 | 0.20 | UGUAGGCAUUAUUUUUUUCUU | miR9726 | OtherRNA | ShortStack |
| ghr-b1.1r1-1545 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:16402167-16402243 | + | 3,780 | 4.08 | GCGGGAGAUUGUGGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1548 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:16420138-16420214 | - | 97 | 0.11 | GCAGAUCGGUUCUCUAAUCCUUUUUUCGGGUGUAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-1551 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:16427515-16427971 | - | 364 | 0.39 | AACAAUUCUAAACUGGCACCACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1552 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:16428329-16428442 | - | 380 | 0.41 | UUGGACCUGAUUCUGUCAAGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-1553 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:16429205-16429439 | - | 473 | 0.51 | AAGAAUGAACCUGAAUUUGCAAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-1554 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:16429980-16430468 | - | 508 | 0.55 | GCUGACUUGAAUGUUCCAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1570 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:16731631-16731726 | - | 8,754 | 9.46 | AGGCUGUGAUGACGAAAA | miR5083 | OtherRNA | ShortStack |
| ghr-b1.1r1-1571 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:16731821-16731909 | - | 1,201 | 1.30 | UGCCUGUGAUGUUCUAACAUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1652 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:18450548-18450768 | + | 43,825 | 47.34 | AGUUACUAAUUCAUGAUCUGGCAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-1697 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:19188943-19189153 | + | 746 | 0.81 | GUAUGAAAAGAACAUGAAGGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1756 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:19941271-19942095 | - | 574 | 0.62 | ACCCAUGGAUUUUGGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1765 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:20114192-20114396 | + | 142 | 0.15 | AAGAGGACACCACCCAACCACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1773 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:20327150-20327275 | . | 579 | 0.63 | AAGUCAUUUUCAGGAAAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-1818 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:21277588-21277614 | - | 327 | 0.35 | GAUCUUUGUCUCUCUUGUAGGCUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-1819 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:21314326-21314639 | - | 308 | 0.33 | GUCACUGUACGAGGUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-1827 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:21334741-21334834 | - | 1,162 | 1.26 | CUUUUCAUUCUGAGUGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1828 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:21334965-21335065 | - | 11,759 | 12.70 | UCAGAUGAUGAGAUUGGAUUAAAAUUUCUCACGACGGUCGUCUGAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-1859 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:22340634-22340720 | + | 206 | 0.22 | UGCAGUCAGAUGUUUGGGGUACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1890 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:24068106-24068259 | - | 132 | 0.14 | CUGAGGACCAACUUCUCAAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1899 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:24391398-24391565 | - | 6,471 | 6.99 | GGGGACGUAGCUCAGAUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-1971 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:26423994-26424356 | + | 1,013 | 1.09 | ACUGGUCGUAGGUUCGAAUCCUACUUGAGGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-1972 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:26425610-26425776 | - | 151 | 0.16 | GGGCCUGUAGCUCAGAGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-1973 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:26426026-26426331 | - | 82,689 | 89.32 | UAUUCUGGUGUCCUAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-1974 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:26426552-26426844 | - | 21,643 | 23.38 | CUAGUACGAGAGGACCGGGAAGGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2011 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:29821955-29821969 | - | 3,382 | 3.65 | CUACAGAGCGUGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2036 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:32350814-32350958 | - | 5,151 | 5.56 | GGGGAUGUAGCUCAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-2047 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:32602906-32602959 | - | 196 | 0.21 | UGUGGCGAAAAAGACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2058 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:32833063-32833118 | + | 682 | 0.74 | AAUAGCUAGAACUGAAUGCGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-2087 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:33824850-33825264 | - | 5,297 | 5.72 | ACUAGGUUGGAUCGGAUGUCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2088 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:33825509-33825817 | . | 1,530 | 1.65 | AUAGGAUACGUACUACCGUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-2090 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:33827537-33828159 | - | 2,831 | 3.06 | CCUUCGUAACCUUCAUCGUCGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2099 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:37795655-37795693 | . | 178 | 0.19 | AAAAUUCGAACUCUCGCGGGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-2142 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:40991058-40991078 | - | 439 | 0.47 | GUGCAAGCUCUGAAAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-2151 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:41321821-41321843 | - | 356 | 0.39 | CGAAGACUUGGACUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2173 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:43055301-43055562 | - | 1,437 | 1.55 | UAUGGAUGAGUGCUCUUGGAGUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2186 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:45964264-45964341 | - | 641 | 0.69 | GCGUCUGUAGCUCAGUGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2187 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:45998089-45998200 | - | 251 | 0.27 | UUUAUCUCCUGACUGAUCAGAACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2189 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:46011027-46011315 | - | 198 | 0.21 | UCUUGGAUGAUCAGAACCGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2192 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:46200980-46201136 | - | 2,615 | 2.83 | AGGUGCGGCUGGAUCACCUCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2203 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:47213466-47213549 | + | 236 | 0.26 | AAGGGAGAUAUGGUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2207 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:47519665-47519682 | + | 994 | 1.07 | AUCCUUUCUCAAAUCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-2208 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:47921282-47922084 | - | 9,016 | 9.74 | AUGCACUUCUGAGACCUGAAACUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2247 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:52123616-52123781 | - | 849 | 0.92 | AGGACCGGGAAGGACGCACCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2250 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:53604250-53604517 | + | 18,230 | 19.69 | GGAGAAGACGCGGGUUCGAUUCCCGCUAUCCGCCCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2251 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:53605852-53606052 | - | 318 | 0.34 | UGGGACGCAUUUUAUUUGGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2267 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:54959493-54959704 | - | 568 | 0.61 | GAAGACCGAGAGCUAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2268 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:55063042-55063058 | - | 614 | 0.66 | UCCGUAUAGCCCUACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2307 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:61017399-61017740 | + | 3,234 | 3.49 | CUAACAGACUGGUAGACUUGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2308 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:61017852-61018118 | + | 5,839 | 6.31 | AUAGCUCGACGCCAGGAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-2369 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:65371884-65371900 | + | 480 | 0.52 | CACGUCGGGUUCACCG | miR894 | OtherRNA | ShortStack |
| ghr-b1.1r1-2394 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:70907475-70907510 | + | 187 | 0.20 | AGGCGAAUUCUGUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2404 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:71645318-71645453 | - | 110 | 0.12 | CUGAUCUAAAAAUAAAACUGGCAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2428 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:75442564-75442987 | . | 1,103 | 1.19 | ACAGACGGUGCGUAAAUGUAACUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2441 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:75993242-75993344 | - | 1,439 | 1.55 | AAUCUGUUGGGCUAC | miR2284 | OtherRNA | ShortStack |
| ghr-b1.1r1-2447 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:76372191-76372206 | + | 372 | 0.40 | CCUAUCUGAUGACUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-2450 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:76896350-76897054 | + | 8,578 | 9.27 | AGAAAGGGACAUAACUUUGGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2454 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:77092175-77092191 | + | 616 | 0.67 | AAGGAUUGAGCCGAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2470 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:77839253-77839267 | - | 463 | 0.50 | CUGUUGUCGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2472 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:77964371-77965196 | - | 1,912 | 2.07 | UAGGAUGAGAUCUCAGUGAGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2474 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:78149694-78149750 | - | 1,795 | 1.94 | CGCGGACCGACCAUAGAACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2488 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:79710938-79711156 | - | 519 | 0.56 | UUUGGAAGAUAUAAUUGGAGGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2532 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:83527677-83528662 | + | 4,088 | 4.42 | CCGUGUCUCAGGCUGUGUGGCAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2533 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:83529644-83529963 | + | 11,362 | 12.27 | AAUCCAGCUCGGCCCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2543 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:83845370-83845885 | - | 1,020 | 1.10 | UCUGACCCUGAGACAUUGAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2544 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:83846108-83846280 | - | 302 | 0.33 | UAGAUCUGUGAGAAAGUACAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2548 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:84894064-84894079 | - | 83 | 0.09 | GCGGAAGGAUCAUUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2549 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:85026551-85026678 | + | 1,346 | 1.45 | GGGGAUAUAGCUCAGUUGGUAGAGCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2558 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:85267824-85269284 | + | 1,452 | 1.57 | GAAGAACUUCAAAACACGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2562 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:85295562-85296329 | + | 3,013 | 3.26 | UGCUGAGAACUUCCGUGCCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2570 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:85466600-85467071 | . | 1,600 | 1.73 | ACUAAUUACUGACUGUUGGCGGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2573 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:85472186-85472268 | + | 334 | 0.36 | CGCGGGAUAGAGCAGUUUGGUAGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2574 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:85472550-85472817 | - | 1,384 | 1.50 | GUGGAUAUAGUCGAAUGGUAAAAUUUCUCUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2580 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:86161612-86161910 | - | 14,414 | 15.57 | GUUCGAUCAUUGACAAGGUUCAAAGAAAGGGUGGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2613 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:87362259-87362326 | . | 279 | 0.30 | AGAAUAUUAUUCUCGUCAGACUUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2614 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:87362836-87363014 | + | 1,326 | 1.43 | UAUUUCGUACUGUACACUUCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2626 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:87973456-87973546 | + | 172 | 0.19 | ACAAGGGGCGCUGUGGCGCAGUGGCAGCAGAGUGCUUGGCACACGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-2638 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:88190263-88190594 | + | 1,224 | 1.32 | AGGACAGGGUCGUAAGGACUAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-2639 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:88190699-88191201 | + | 1,077 | 1.16 | ACAGUGUCUGAUGGGAUUUAAACUGUUGUUUUGGUUGUAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-2678 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:88936973-88937020 | - | 7,097 | 7.67 | UUUAGUUGCCACCGUUGAGUUUGGAACCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2790 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:90725535-90725621 | - | 3,411 | 3.69 | GGUCCCGUAGCUCAGUUGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2798 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:90789998-90790163 | + | 29,667 | 32.05 | GGUGUCGUGGUGUAGUUGGUUAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2799 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:90793756-90794004 | - | 360 | 0.39 | UGAUGUCGUCAGAGCUAACACUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-2836 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:91364315-91364709 | - | 284 | 0.31 | AAAGGUUGUGAGCUCACUCAGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2896 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:92485820-92486482 | - | 426 | 0.46 | AGUGGAUUCAAGUGUAACAGUGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-2897 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:92486748-92487404 | - | 550 | 0.59 | UCAUUAUCUUUGUAGCCACUGUUUACUUCAUGUCUAAGCCUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3003 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:93725573-93725697 | - | 381 | 0.41 | UGAUUGUGGAGAUGACCGGCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3004 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:93725811-93725847 | - | 228 | 0.25 | CUCGGAUCAUCGCUGUUGAUGUGAACCCCAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3005 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:93725964-93726343 | - | 411 | 0.44 | UGGACGACAGUAUAUUGGCUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3006 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:93728622-93728741 | - | 1,549 | 1.67 | GAUACCGUGCCCAUGACU | miR2947 | OtherRNA | ShortStack |
| ghr-b1.1r1-3033 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:94012113-94012708 | - | 1,250 | 1.35 | UUGACAGAAGAGAGAGCAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3060 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:94385419-94385645 | - | 245 | 0.27 | UUGCUGAAUUUGAACCACAACUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3061 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:94386556-94386813 | - | 222 | 0.24 | AUUUGAGGCACUGCUGCAAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3073 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:94481948-94482408 | - | 525 | 0.57 | GAUGGCGGAGCAGAAGAUGAAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3092 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:94846899-94847030 | - | 391 | 0.42 | UUUGACCUCUGAGGGCAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3093 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:94848002-94848132 | - | 236 | 0.26 | GCCAAGCAUAGCUAUGAGAUCUGAGGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3132 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:95116695-95116788 | - | 7,804 | 8.43 | GCAGGUUUGCCCGAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3173 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:95318363-95318400 | + | 416 | 0.45 | AGCUCUAUCUGAUCAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3198 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:95453012-95453457 | + | 4,430 | 4.79 | AUGAUUGGGCAAAAAGUGGGAUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3290 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:96222825-96222860 | + | 19 | 0.02 | UUUGUUAGGCUUGGUGCUGAUGAGACAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3291 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:96224112-96224157 | - | 294 | 0.32 | AACUUGGCUCUGAUAAAUAUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3333 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:96706811-96707006 | . | 572 | 0.62 | UCACAUAAAGUCAACGAAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3334 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:96707100-96707287 | . | 1,628 | 1.76 | CAAAAAAGUUUCGGAUUGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3363 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:96874494-96874532 | + | 123 | 0.13 | UUCGAGGCAUUAGAAUUUGUCUGACUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3365 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:96876359-96876847 | + | 4,391 | 4.74 | UAAGAACCUGCCCUUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3367 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:96899490-96899575 | + | 316 | 0.34 | AGAUUUAGGCUCUGGUCCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3410 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:97132096-97132122 | - | 238 | 0.26 | CAUCGUCAUCGUCGGAUGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3480 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:97595664-97595755 | - | 359 | 0.39 | GUUGAGAUGGCCGAGUUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3489 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:97628697-97628784 | + | 672 | 0.73 | GCAGGUUUGCCCGAGUGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3492 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:97671737-97671814 | + | 600 | 0.65 | GCAGGUUUGCCCGAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3511 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:97736231-97736735 | - | 16,599 | 17.93 | CGUGCCUGUUGAAGAAUGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3525 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:97773375-97773476 | + | 1,290 | 1.39 | GACGAUUGUGGGUUC | miR279 | OtherRNA | ShortStack |
| ghr-b1.1r1-3530 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:97782732-97782794 | - | 2,881 | 3.11 | ACUUCUAAUCAGACGAUUGUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3556 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:97879022-97879126 | - | 111,328 | 120.26 | GGGGGUGUAGCUCAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3579 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:98045973-98046363 | + | 658 | 0.71 | GUUGGCCGGCCUGAAGAAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3580 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:98046880-98047358 | + | 731 | 0.79 | GUUUUCGAGAUCGUGAUGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3619 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:98157022-98157054 | - | 327 | 0.35 | AGGGCUCGGGAGUCAGUUACGCGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3670 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:98466811-98467845 | + | 1,702 | 1.84 | UCUUGACCAGAUCACCGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3721 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:98694974-98695596 | - | 34,248 | 36.99 | GGGAUUGUAGUUCAAUUGGUCAGAGCACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3727 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:98703404-98703708 | . | 814 | 0.88 | AUAGCUGAAACGGAUAUGGAAUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3806 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:98951247-98951262 | + | 690 | 0.75 | CCAGCAGCCACACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3856 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99077452-99077792 | - | 996 | 1.08 | UAACUGAUGAAUGAAU | miR10407 | OtherRNA | ShortStack |
| ghr-b1.1r1-3857 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99077893-99077978 | - | 854 | 0.92 | GAUGAACUUUGCUGAGCAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3858 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99078109-99078219 | - | 360 | 0.39 | GUGGAAACUGCGGUUGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3884 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99204640-99204723 | - | 14,789 | 15.98 | GGUGGCUGUAGUUUAGUGGUAAGAAUUCCACGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3885 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99204800-99204860 | - | 1,891 | 2.04 | GGUGGCUGUAGUUUAGUGGUAAGAAUUCCACG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3901 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99283287-99283531 | - | 31,890 | 34.45 | GUUCAGUGAAGAAACAAUAUGGGCAUGUUCUCUCUGAGAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3917 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99385650-99385736 | + | 554 | 0.60 | AAGCAUCGGAUUUUGAAACUCGCAUUGGUAUUAGUGAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3957 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99538877-99538957 | - | 4,059 | 4.38 | AUAGUUACUCUGAUAGGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3958 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99539087-99539227 | - | 221 | 0.24 | UGGGCAACUUUGCCGAGGUGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3959 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99539376-99539713 | - | 427 | 0.46 | UGGGCAACUUUGCCGAGGUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-3960 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99540153-99540234 | - | 1,513 | 1.63 | CUAAAUGAUGAACUCUUUUUUAUUAGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-3961 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99540604-99540687 | - | 4,105 | 4.43 | UUUUUUGUCAUAGUUACUCUGAUAGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3963 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99563030-99563058 | - | 454 | 0.49 | GGGGAUGUAGCUCAGAUGGUAGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-3992 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99703668-99704216 | + | 1,434 | 1.55 | GUGAGAUCAUUGGAACUAGGACCGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-3994 | Gossypium hirsutum (Upland Cotton) 1.1 | A01:99704596-99705061 | + | 1,291 | 1.40 | CCCGGAGAAGAAAGCAACUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-4037 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:92655-92807 | - | 4,141 | 4.47 | CCGACCUUAGCUCAGUUGGUAGA | miR6478 | OtherRNA | ShortStack |
| ghr-b1.1r1-4175 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:733210-733228 | - | 156 | 0.17 | UACUGAGACACGGACCAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-4201 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:903112-903130 | . | 62 | 0.07 | GCUAUGAUCUUUUACCAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-4225 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:999414-1000472 | . | 6,601 | 7.13 | CCCCUCCCUCUAGCGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-4273 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:1349054-1349349 | + | 199 | 0.22 | UAUUCGUGUAUAGAAGUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-4314 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:1610514-1611146 | - | 11,285 | 12.19 | GAGGAAGGGCGUAGUAAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-4371 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:1994214-1994228 | + | 211 | 0.23 | CCAUCGCGAUCGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-4375 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:2019602-2020909 | . | 6,838 | 7.39 | GUGCGAUGGUUGGCUGUUCACGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-4395 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:2096965-2097168 | . | 4,445 | 4.80 | GUUAGGACUCAUCGAGAUAGACGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-4435 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:2369755-2369860 | - | 915 | 0.99 | CCGACCUUAGCUCAGUUGGUAGA | miR6478 | OtherRNA | ShortStack |
| ghr-b1.1r1-4436 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:2371158-2371265 | - | 620 | 0.67 | AAAAAUCGACCUUAGCUCAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-4437 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:2372833-2372942 | - | 932 | 1.01 | AGUUCGACCUUAGCUCAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-4509 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:2926544-2926815 | - | 203 | 0.22 | AGAUGGACUUGGAACCACGGGUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-4510 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:2926957-2926988 | - | 34 | 0.04 | CUGAAAUCGAGAAGCCUAUGUUUGAACUUGUCUCAGCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-4526 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:3010000-3010246 | + | 543 | 0.59 | AAACAUGGACGUCACUCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-4527 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:3011860-3012017 | + | 318 | 0.34 | CCGGAAAGCAUGAAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-4528 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:3012336-3012615 | + | 659 | 0.71 | CCGGCAUCGAACAUGGACCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-4536 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:3024711-3025209 | + | 4,526 | 4.89 | AAGAGUAGGAGUAGACAAAACGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-4546 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:3075952-3076586 | + | 11,567 | 12.50 | ACCGGUAUAGUUCGAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-4671 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:3528352-3529068 | + | 1,331 | 1.44 | GUGGGACAGAACUUUAGGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-4729 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:3805170-3805325 | - | 75 | 0.08 | UAUGGAUUGUGUGAGAAAGUAUAUUCUUUUUAGUGGUCUGAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-4730 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:3806294-3806557 | - | 95 | 0.10 | UCGCUUAAAACGCUCACAUCGAGCGGCAUGGACUGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-4813 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:4096663-4096681 | + | 190 | 0.21 | ACCCAUAUUCCGAGUCCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-4847 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:4444851-4445092 | - | 52,026 | 56.20 | AAAUUUGUGGAAACUAAUAGGGUUGGCUCGCUCGGCCGACCCUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-4878 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:4707737-4708870 | - | 8,075 | 8.72 | AAUGUAUGAACCUCCAAAGAAGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-4923 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:5238939-5239293 | - | 3,321 | 3.59 | GUAGGAAGAACUGGAGAAGACAUUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-4938 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:5345451-5345587 | - | 216 | 0.23 | AUUUGGGCCCUACAUGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-4939 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:5345672-5346160 | - | 4,031 | 4.35 | CCAGGUUGGGACAUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-4949 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:5403911-5404891 | + | 16,215 | 17.52 | UUGGGUCGUUGCGAUUACGGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-4958 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:5513028-5513140 | - | 3,145 | 3.40 | GUGGACGUGCCGGAGUGGUUAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5089 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:6849266-6849283 | - | 134 | 0.15 | ACCGAUACUAAUUGCUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5106 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7013302-7013575 | - | 454 | 0.49 | CAGUACUCUGCUAAAGACAUAAAUUAUUUGUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-5130 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7191000-7191081 | + | 786 | 0.85 | CCGGUGGGACCUCCA | miR9993 | OtherRNA | ShortStack |
| ghr-b1.1r1-5151 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7319182-7319688 | . | 5,098 | 5.51 | AUCAGAUAAGUCUUACACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5153 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7336808-7337006 | - | 2,309 | 2.49 | UUGCACUAUUGCUUGGGCUUGGCGAACCACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5155 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7359026-7359221 | - | 567 | 0.61 | AUACCUUCCUCGGCCUUUUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-5160 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7388238-7388509 | . | 1,591 | 1.72 | CUAAGAUCAAGUGUAGCAUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5162 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7487365-7487634 | + | 2,812 | 3.04 | UUAAUAUCUGAUACGUGGGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-5165 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7539310-7539510 | . | 1,255 | 1.36 | UAUUUUUCGAGUGGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5179 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7656992-7657044 | + | 92 | 0.10 | AAAAGAUUCGAAGUGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5180 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7657708-7657733 | . | 68 | 0.07 | AUUCUCCCUAGAUACAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5198 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7797449-7798151 | - | 10,633 | 11.49 | AUCAAAAAUGAUUGUUAGACACCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-5200 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:7816501-7816571 | - | 1,091 | 1.18 | UGGCUGUAGUUUAGUGGUAAGAAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5253 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:8280712-8281023 | - | 296 | 0.32 | ACUUUGAUUCUGAGCUUGGAACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-5334 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:9467995-9468010 | - | 2,967 | 3.21 | CCACUGUGGUCGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5367 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:9894798-9895488 | - | 486 | 0.53 | CGACCAAACCGAGAGCUGUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5448 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:10726941-10727064 | - | 763 | 0.82 | UAAAAAACUGCAAAUGACCCAUCAUAGCUAUGAGAUCUGAGGGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5449 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:10727769-10727866 | - | 3,276 | 3.54 | GCUAUGAGAUCUGAGGGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5450 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:10730210-10730368 | - | 998 | 1.08 | AUAGUAUGAGAUCUGAGGGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5451 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:10730430-10730495 | - | 512 | 0.55 | GGCCCAAUGAUUGAGAACUCAUUGAAAUGGAGCAGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5452 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:10732558-10732635 | - | 778 | 0.84 | UAGCUAUGAGAUCUGAGGGCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-5453 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:10733926-10734202 | - | 12,156 | 13.13 | GCUAUGAGAUCUGAGGGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5469 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:11014365-11014561 | - | 211 | 0.23 | AUAUAUAAUCCUGUACGUGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5470 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:11015459-11015676 | - | 179 | 0.19 | UGUCUCUCAGUUUGCCUUUUGAAACCUCUGCAGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5510 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:11396651-11396753 | - | 1,379 | 1.49 | AUUUUUGGUUUCUGAUGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5511 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:11396888-11397044 | - | 7,058 | 7.62 | AUUUGUGCUGAUAAGUCUCUCUACCCAUAUUUUUUUCUGAGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5512 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:11398643-11399087 | - | 16,033 | 17.32 | AUUUGUGCUGAUAAGUCUCUCUACCCAUAGUUUUUUUCUGAGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5518 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:11468125-11468140 | - | 468 | 0.51 | CCCGGUGGGACCUCCA | miR9993 | OtherRNA | ShortStack |
| ghr-b1.1r1-5542 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:11849024-11849441 | - | 424 | 0.46 | GAUGGCUGAACAUGAAACGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5549 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:11950466-11950490 | - | 529 | 0.57 | CAGGUGGUGCAUGGCUGUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-5569 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:12148177-12148372 | . | 625 | 0.68 | AAGAGAGCAUCUGGGAGCAAAAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-5587 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:12417284-12417979 | . | 5,974 | 6.45 | GAGGCACUGCAGUUGACUAGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5595 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:12858753-12859041 | + | 5,456 | 5.89 | AUGGACCGAACUGUCUCACGACGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5627 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:13708663-13709498 | . | 1,144 | 1.24 | UGAAGACCAGUGGAUAAGCGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5628 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:13709595-13709720 | + | 173 | 0.19 | UUGGAAGCGCUUGGGACCCGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-5629 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:13709839-13710071 | + | 379 | 0.41 | AAACGGAUUGUAUUCAGGUCGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-5641 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:14249285-14249300 | + | 758 | 0.82 | UUUUGACGUUACCGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-5651 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:14664083-14664100 | + | 170 | 0.18 | AUUUGUCUGACUUGU | miR2013 | OtherRNA | ShortStack |
| ghr-b1.1r1-5690 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:15230838-15230930 | - | 983 | 1.06 | AAGAGCGCCUCUGGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-5704 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:15639519-15639598 | - | 514 | 0.56 | GCGGGGAUAGCUCAGUUGGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-5707 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:15686254-15686527 | + | 633 | 0.68 | ACACGCAUUCUGAAUAACCAAUUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5708 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:15686991-15687511 | + | 1,265 | 1.37 | AGGAAGACCGGCGGAGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5722 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:16266606-16266775 | + | 3,821 | 4.13 | UUCUUUUGCUUAUAUCACUCCCUUUCUUUGGUACAUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5734 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:16906542-16906673 | - | 410 | 0.44 | GCCUUGGUGGUGAAAUGGUAGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5736 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:17197628-17197825 | + | 2,907 | 3.14 | AAUGCGUAGAGAUCGGAAAGAACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5745 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:17467503-17467656 | . | 912 | 0.99 | CGUUUGAUUCUGAUUUCCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5748 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:17767511-17767581 | - | 86 | 0.09 | UCUGGUGGGUCAGUACCACCGCAAGGACUGUUGGGUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5773 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:18949365-18949444 | + | 353 | 0.38 | UGUGCUAGAGAAUUGGGAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5774 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:19039172-19039787 | + | 809 | 0.87 | AAGGGAACGCCUGCAGAUGUCAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5775 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:19039876-19039955 | + | 147 | 0.16 | CAGACAAACCUGGUCCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-5803 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:20316003-20316086 | + | 4,879 | 5.27 | GCGUUUGGUCUAGUGGUAUGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5816 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:20864311-20864797 | - | 740 | 0.80 | GCAUUCGUGAUCAAGGAUGACCUGACGCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5830 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:21646921-21646952 | - | 130 | 0.14 | UACGAGACUGUUUGAAAGCGGCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5847 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:26599617-26599684 | - | 223 | 0.24 | GAUGGUUACACUUGAUCUCUGAACUUCAGGUAAGUUACAUCUGUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-5853 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:27651535-27651595 | - | 135 | 0.15 | UCGAAACCUGGCUCUGAUACCA | miR5139 | OtherRNA | ShortStack |
| ghr-b1.1r1-5858 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:28368903-28369068 | + | 5,083 | 5.49 | UGGUAUUGCUCCUUUAUUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-5877 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:30852351-30852579 | + | 7,491 | 8.09 | UGGCAAGAAUGCUAGACCAUAAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-5884 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:32383607-32383748 | - | 557 | 0.60 | CAUUUCUGUACUGGUAGUACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5904 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:34907648-34907803 | . | 292 | 0.32 | CUCCUUCUAGCGCCA | miR3711 | OtherRNA | ShortStack |
| ghr-b1.1r1-5916 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:35098275-35098342 | + | 342 | 0.37 | ACAAAAAAGAGCUUUCGGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5932 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:36173102-36173405 | + | 2,430 | 2.63 | UUCUGGAUCUCUACUUUACGGAAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-5943 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:38580248-38580361 | . | 517 | 0.56 | AAGUUAUUUUCCGGAAAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-5945 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:38668928-38669071 | - | 360 | 0.39 | CUAUCGUCCAACCGUUAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-5953 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:39239969-39239985 | + | 184 | 0.20 | CCCGGUAGGACCUCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5957 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:39406566-39406623 | + | 456 | 0.49 | CGAACCCUGCUGUCGACGCUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-5980 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:40543186-40543200 | - | 147 | 0.16 | CCACUGUGGUCCCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-5994 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:40968919-40969430 | - | 15,633 | 16.89 | AGAAUUUCAUUAUAUCCUUUCUCAAAUCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-6032 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:42568038-42568361 | - | 1,265 | 1.37 | AGUUGAAAAUAAGCGUAGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6033 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:42570439-42570826 | - | 4,956 | 5.35 | CGUUACCUUAACCGCAAGGAGGGGGAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-6034 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:42570888-42572091 | - | 31,583 | 34.12 | GCGUAAGAACCUGCCCUUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-6035 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:42595639-42595727 | - | 19,860 | 21.45 | GGGGGUGUAGCUCAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6037 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:42599635-42599689 | + | 3,058 | 3.30 | GCCGAGAGCUGAUGACGAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6040 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:43153138-43153232 | - | 128 | 0.14 | UACAUUCCUCUUAGUAUCUAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6041 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:43153302-43153439 | + | 884 | 0.96 | UCCUCAGUAGCUCAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6044 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:43261232-43261363 | - | 2,076 | 2.24 | AAUCCUUCCGUCCCAGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6063 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:44538464-44538560 | + | 433 | 0.47 | UAGCUCUGAUAAAGAUUAGCCGAUAUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6067 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:44637259-44637370 | + | 223 | 0.24 | CCCGGUUGGGCCCUCCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-6072 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:44827798-44827903 | - | 19,467 | 21.03 | AUCCUGCUGUCGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6103 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:46798180-46798196 | - | 586 | 0.63 | CCCGAGCUCAGACACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6127 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:53868415-53868432 | - | 1,266 | 1.37 | UGUGGCUGGAUUGAAUCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6149 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:55524748-55524764 | + | 129 | 0.14 | CGGAUCGAGGACAGUGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6172 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:56571639-56572221 | + | 40,615 | 43.87 | AGGGAUGUAGCGCAGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6177 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:57494460-57494736 | + | 344 | 0.37 | GCGCCUGUAGCUCAGUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6181 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:59736753-59736889 | + | 2,080 | 2.25 | GCCGCUAUGGUGAAAUCGGUAGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6194 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:60374060-60374136 | - | 737 | 0.80 | GCGGGUGUAGCUCAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6225 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:61520055-61520263 | + | 1,174 | 1.27 | CACGUCGGGUUCACU | miR894 | OtherRNA | ShortStack |
| ghr-b1.1r1-6253 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:64210956-64211238 | + | 502 | 0.54 | UUCGAGUCUAUGUACAGGCAAAUUCUGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6271 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:66389536-66389636 | + | 4,436 | 4.79 | GAUUGGGGAUGUGGCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6306 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:69233227-69233346 | + | 414 | 0.45 | AAGGAAGUUGGUGACCUGAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-6331 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:71682692-71682837 | - | 10,936 | 11.81 | CGCGUGCCUGUUGAAGAAUGAGCCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-6332 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:71683200-71683331 | - | 10,517 | 11.36 | UUCGAACUGCUGCUGAAUCCAUGGGCAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-6339 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72305363-72305401 | + | 2,467 | 2.67 | GCGUUUGUAGUCCAACGGUUAGGAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6340 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72306160-72306188 | + | 710 | 0.77 | GCUUUUGUAGUCCAACGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6341 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72383119-72383184 | + | 251 | 0.27 | GAUGAAGAACGCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6342 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72384669-72384781 | + | 472 | 0.51 | ACGGUGGUCAUGGAAGUCGAAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6343 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72387940-72388471 | + | 1,405 | 1.52 | UUAGCUCUAGAAUUACUACGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6344 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72455660-72457383 | + | 13,900 | 15.02 | UUAACGAACGAGACCUCAGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6345 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72458102-72458183 | + | 1,475 | 1.59 | AGCGGAGGAAAAGAAACUUACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6346 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72458301-72459212 | + | 3,196 | 3.45 | CGAAAGAUGGUGAACUAUGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6347 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72459980-72460758 | + | 11,369 | 12.28 | UUUGAUCCUUCGAUGUCGGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6348 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72471585-72472049 | - | 4,675 | 5.05 | GACGGAGAAUUAGGGUUCGAUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6349 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72479333-72480713 | - | 7,407 | 8.00 | GACGGAGAAUUAGGGUUCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6350 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72481501-72482584 | + | 6,731 | 7.27 | AUCGGAGUAAUGAUUAACAGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6351 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72485907-72486018 | + | 1,103 | 1.19 | UACCUGGUUGAUCCUGCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-6352 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72486157-72486570 | + | 4,502 | 4.86 | UAGUUUGUUUGAUGGUAUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6354 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:72487601-72488263 | + | 4,427 | 4.78 | UGCGGAAGGAUCAUUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6358 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:73257138-73257153 | + | 139 | 0.15 | CAAACCGGGCACUACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6372 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:73379478-73379517 | - | 337 | 0.36 | GUAGGAUCAGAGGAGAGCGUGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6474 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:75121449-75121557 | - | 36,779 | 39.73 | UCAGAAGGUUGCGUGUUCGUUUCAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6479 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:75240000-75240248 | + | 41,348 | 44.66 | GUGCGGCUGGAUCACCUCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6489 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:75422656-75422671 | - | 256 | 0.28 | GCCCUUUUAACUCAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6508 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:75730617-75730706 | - | 341 | 0.37 | CUAUAUGGAACGCCUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6531 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:76036375-76036499 | - | 289 | 0.31 | UUUAUUCCUUCCUUGGAUGUCUGAAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6532 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:76036598-76036723 | - | 1,287 | 1.39 | UUUUAUCCUUCCUUGGAUGUCUGAGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6533 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:76036821-76037010 | - | 19,614 | 21.19 | CCUUCCUUGGAUGUCUGAGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6534 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:76037162-76037289 | - | 5,244 | 5.67 | CCUUCCUUGGAUGUCUGAGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6535 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:76037555-76037681 | - | 2,526 | 2.73 | CCUUCCUUGGAUGUCUGAGACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6536 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:76041685-76041704 | + | 4,098 | 4.43 | AUCCCACAGCUGUCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6567 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:76455660-76455863 | - | 2,044 | 2.21 | UUUCUUGUUGAAUGCCCCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6572 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:76620102-76620604 | + | 67,166 | 72.55 | GCCGCUAUGGUGAAAUCGGUAGACACGCUGCUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6582 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:77627361-77627619 | + | 407 | 0.44 | UCCUCAGUAGCUCAGCGGUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6583 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:77628252-77628790 | - | 202,822 | 219.09 | GCUCGACGCCAGGAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-6584 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:77629250-77629985 | - | 153,741 | 166.07 | CGGAUAAAAGUUACUCUAGGGAUAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6585 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:77630200-77630523 | - | 58,684 | 63.39 | GGGGGUCGCAGUGACCAGGCCCGGGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6622 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:78425600-78425780 | + | 1,173 | 1.27 | ACCGGUAGACUUGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6643 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:78730634-78730740 | + | 4,557 | 4.92 | GCUCUUGUAGCUCAGUUGGUUAGAGCACCCGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6658 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:78876347-78876937 | . | 3,030 | 3.27 | AUUGAACUAAGACUUGAUCAGCAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6701 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:79146450-79146543 | + | 9,328 | 10.08 | GGGGAUGUAGCUCAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6703 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:79164022-79164115 | + | 4,697 | 5.07 | GCGCUUGUAGCUCAGUGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6707 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:79406802-79406818 | + | 461 | 0.50 | CCGUAAGCUCAUGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-6730 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:79700230-79700246 | + | 324 | 0.35 | AGAUAAAAGGUCGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6762 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:79931018-79931299 | . | 1,401 | 1.51 | UCGGACCGAACCAUUUGUCAGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-6800 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:80068025-80068045 | - | 8,431 | 9.11 | CUCUCAGGCGUCGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6849 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:80489037-80489333 | . | 830 | 0.90 | UUUGGAUUGAAGGUCUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6874 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:80600647-80600756 | + | 277 | 0.30 | AGCUGAGACUCGACAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-6883 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:80638963-80639050 | + | 855 | 0.92 | GGUGUCGUGGUGUAGUUGGUUAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7027 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:81797676-81797831 | + | 15,561 | 16.81 | UCUCAAUGAUGAUUCAACAAAGAUGACGAGUCUGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7028 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:81797909-81798166 | + | 15,459 | 16.70 | UACCUCCUACUCAUUCUGAAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-7119 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:82253141-82253493 | + | 51,751 | 55.90 | UUCAUGGACGUUGAUAAGAUCCUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7173 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:82476965-82477082 | + | 7,752 | 8.37 | GCUGGAGUAGCUCAGUCGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-7187 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:82553243-82553721 | + | 35,979 | 38.86 | UGGCUGUAGUUUAGUGGUAAGAAUUCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7293 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:82943174-82943570 | + | 555 | 0.60 | GACAUGAUCAAGGGAAAGACCCCAGAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-7322 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:83100488-83100504 | - | 365 | 0.39 | UCCCGGCUGGGGCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-7331 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:83134551-83134821 | - | 3,174 | 3.43 | UACGGAAAGUAGAAAUGGAGGCGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-7346 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:83179325-83179573 | + | 494 | 0.53 | GUGGUAGUCCUGAAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7347 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:83179723-83180500 | + | 1,866 | 2.02 | UGACACUCAAAGGCACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7349 | Gossypium hirsutum (Upland Cotton) 1.1 | A02:83215796-83215815 | - | 646 | 0.70 | AUUUGCUUGUGUAGGAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7372 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:50856-51488 | + | 2,248 | 2.43 | CGGACACAGGUGGUGCAUGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7382 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:177502-177582 | + | 579 | 0.63 | UAAUCCUGAGGUCGAGAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7395 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:246413-246715 | . | 1,243 | 1.34 | AAAUUAUCUUGGAUUCGGGUCAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7396 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:246884-246970 | - | 183 | 0.20 | UGAGCGGCAUGUAUUUCCACGGUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-7411 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:366661-366739 | - | 362 | 0.39 | GGGUCCAUAGCUCAGUGGUAGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7434 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:412295-412555 | + | 3,914 | 4.23 | UUGCAGUGAUGAACAAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7578 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:1404777-1404800 | - | 377 | 0.41 | GCUGGUUUGCCCGAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-7597 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:1507085-1507689 | + | 4,358 | 4.71 | UAGACAAAAGAGGACUAGGGCGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7606 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:1552727-1552831 | - | 2,324 | 2.51 | UUCGAAAGAGGGCGUGGGUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7609 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:1554705-1555357 | + | 432,223 | 466.88 | ACCGGUAGACUUGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7610 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:1559300-1559337 | - | 5,793 | 6.26 | GCACCAGUAGUCUAGUGGUAGAAUAGUACCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7713 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2031632-2031733 | - | 2,782 | 3.01 | GUCUGGGUGGUGUAGUUGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7715 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2035672-2035773 | - | 435 | 0.47 | GUUGUUGUAGUAUAGUGGUGAGUAUUCCCGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7717 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2036850-2036964 | - | 871 | 0.94 | GUCUGGGUGGUGUAGUUGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7718 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2039214-2039299 | - | 441 | 0.48 | AACGAAGUCGUUGUAGUAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-7720 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2041136-2041220 | - | 995 | 1.08 | GUCUGGGUGGUGUAGUUGGUUAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7746 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2206309-2206387 | - | 1,463 | 1.58 | UGUAAACUGAAGGUCCGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7752 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2232901-2232919 | + | 2,373 | 2.56 | UGUGGCUGGAUUGAAUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7769 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2292400-2293353 | + | 12,616 | 13.63 | AAACAAGAAUUCUUGAACAGCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-7775 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2300655-2301050 | + | 5,316 | 5.74 | UCGGGUGGUUUAACUCUGGCUUGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7778 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2312303-2312534 | + | 1,519 | 1.64 | UCGGGUCCGGAUCUUGGGUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-7779 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2313433-2313742 | + | 7,143 | 7.72 | GGGGCUUUAAGGUGACGGAAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-7781 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2320941-2321247 | - | 4,851 | 5.24 | GCCAAGAGUUGGACCAAGGGGCACGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7787 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2327946-2328292 | - | 22,884 | 24.72 | CUAACUGGACCAUCAUUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7790 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2341718-2342029 | - | 7,813 | 8.44 | GGGCUUUAAGGUGAUGGAACAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7792 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2351181-2351583 | + | 47,892 | 51.73 | UGACCCAACUGUACCAUCAUUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7793 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2352096-2352369 | - | 9,321 | 10.07 | UACUGGUUGAGCCAGGGGUACUGUGAACCAUCAUCUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7795 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2355871-2356179 | - | 8,132 | 8.78 | UUUAACUCUGGCUUGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-7796 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2357748-2358128 | + | 42,906 | 46.35 | CAACUGGACCGUCAUUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-7815 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:2408078-2408451 | - | 22,761 | 24.59 | AUUUUGUGUCAGGACCUACGGGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8017 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:3669229-3669528 | - | 1,773 | 1.92 | GUGAUGAGUUAUAACAGACCUGUAAUGACUUGCGAAUAUGAUCGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8119 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:4492059-4492421 | - | 2,821 | 3.05 | AACUGGCGGAAUGCUCUCGAAACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8120 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:4492610-4493377 | - | 16,115 | 17.41 | UUUUGUGUUGCUGAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8158 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:4829335-4829489 | + | 176,567 | 190.73 | AGAAUCCUGAUGAUGCUGC | miR172 | OtherRNA | ShortStack |
| ghr-b1.1r1-8220 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:5751440-5751541 | - | 1,199 | 1.30 | UAGUUGAUGAGAGUUACUUCGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8243 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:5885132-5885349 | - | 4,664 | 5.04 | CCGACCUUAGCUCAGUUGGUAGA | miR6478 | OtherRNA | ShortStack |
| ghr-b1.1r1-8253 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:5931221-5931791 | + | 848 | 0.92 | CCGGAGACAAGAAGAAGAAGAGAGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8277 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:6128393-6128479 | - | 9,574 | 10.34 | GGUGUCGUGGUGUAGUUGGUUAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8280 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:6148338-6148361 | . | 73 | 0.08 | AAACUUGAUUUAGUGACUCUUUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8281 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:6149517-6149939 | . | 1,925 | 2.08 | CGAUUCCCGCUACCCGCUCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8291 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:6195441-6195534 | + | 5,983 | 6.46 | GGUGGCUGUAGUUUAGUGGUAAGAAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8292 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:6195609-6195636 | + | 208 | 0.23 | UGAAAACGGGGUUGUGGGAGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8296 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:6250056-6250222 | - | 5,466 | 5.90 | CGGGAUAUGAUGAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8357 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:6747040-6747545 | . | 1,139 | 1.23 | AUCGGACCGAACCAUUUGUCGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8363 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:6841756-6841818 | - | 171 | 0.19 | AGAUUUAGGCUCUGGUCCGAAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8399 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:7302088-7302360 | - | 983 | 1.06 | GUCGUUGUAGUAUAGUGGUGAGU | miR6300 | OtherRNA | ShortStack |
| ghr-b1.1r1-8449 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:7858842-7858871 | + | 38 | 0.04 | UUCAACGUCUAGAGAAUGAUCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8450 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:7858905-7859013 | - | 974 | 1.05 | GCGUUUGUAGUCCAACGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8463 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:8035028-8035124 | - | 6,103 | 6.59 | GUCCCACUGGGUGUGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8487 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:8729884-8730031 | + | 131 | 0.14 | UUAACCCAAGGGGAACUGACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8488 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:8730108-8730793 | + | 463 | 0.50 | UAUGUGAACUCUUCUGACAGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-8618 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:11054491-11054509 | - | 335 | 0.36 | AUGUGCAGGAUGAAGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8631 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:11625922-11626621 | - | 769 | 0.83 | AUGAGGACCACUGAUGUCAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8632 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:11626719-11627686 | - | 1,920 | 2.07 | UGAUGAAGAGCUUUUGCAAUUAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-8636 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:11717924-11717940 | + | 770 | 0.83 | UCCGUAUAGCCCUACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8648 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:12063186-12064201 | + | 3,029 | 3.27 | CGGAUGAGAACACCUGCGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8699 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:12689880-12689896 | - | 2,563 | 2.77 | UCCCUGUAGGACCUCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8703 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:12988178-12988293 | - | 935 | 1.01 | AUGGAUGAGAAGAAUAUUUCCUUUCUGAUGGUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-8704 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:12988545-12988903 | - | 30,947 | 33.43 | UCGCGGUGAUGACUCCAUAAAUUCAAGCUCAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8756 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:14363402-14363829 | + | 353 | 0.38 | GCCGGCUAACGACGAGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8767 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:14678891-14678909 | - | 888 | 0.96 | AUUGGGGUUGUAGGACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8776 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:14839165-14839264 | + | 403 | 0.44 | CCGAGCCUCUAGAACAGAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8818 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:15614357-15614573 | - | 174 | 0.19 | ACAAAACAGUGGCUCCC | miR11317 | OtherRNA | ShortStack |
| ghr-b1.1r1-8819 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:15614618-15614957 | - | 277 | 0.30 | UUGGAACCGGGACAGUGACUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8820 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:15615737-15616164 | - | 512 | 0.55 | GCGGCGGAGCCAUCCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8823 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:15703042-15703417 | + | 39,425 | 42.59 | CCGGUGUGGGCGUUAGAGCAUUGAGAGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8824 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:15703609-15704050 | + | 8,706 | 9.40 | GUGCUGUAGCUAACGCGUUAAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8876 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:17416490-17416507 | - | 103 | 0.11 | AUCUGGUUCCUGGCACCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-8880 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:17426349-17426511 | . | 370 | 0.40 | AAAGACACAGGGAACGGGUUACCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8892 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:17568234-17568385 | - | 22,288 | 24.08 | GCCUCUGUAGCAUAGUGGUAGUGCUUUCGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8967 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:24695971-24696215 | + | 720 | 0.78 | UUUAAGUCUGAUGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8968 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:24696328-24696445 | + | 3,056 | 3.30 | AUUCAUAUUUUCUGAGCGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8986 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:25850725-25851043 | + | 1,946 | 2.10 | GUAACUGGUCUGAGAGGAUGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-8987 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:25851152-25851314 | + | 371 | 0.40 | CCUUGCAAGGCUAAAUACUCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-8988 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:25904216-25904233 | - | 7,410 | 8.00 | CCUGCCGCUCACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-8992 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:25981362-25982132 | + | 52,634 | 56.86 | GCAAAGGAUGAAUGUUUAUCUUAUCCUACACUCUGAUGAACCGUGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9007 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:27220202-27220381 | + | 2,255 | 2.44 | AAUCUGUUGGGCACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9013 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:27826870-27827104 | + | 472 | 0.51 | ACUUACCGGAUGACUUUGACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9014 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:27828259-27828795 | + | 468 | 0.51 | UCUUAACUCUGGAUUUAUGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9018 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:28754277-28754503 | + | 912 | 0.99 | ACCUUAUUUUGAUCGUUUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9020 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:28860564-28860660 | + | 1,006 | 1.09 | UCAAAAUUGAAGACAAAGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9024 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30384858-30384961 | - | 132 | 0.14 | AGACAAGUAGUCUGAUGCAAGAUUGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9025 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30387092-30387308 | . | 2,051 | 2.22 | UCUGGUACUUUCAACUUCAUGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9026 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30388250-30388288 | . | 108 | 0.12 | AUCAAACCGAGGGACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9027 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30388370-30388605 | - | 12,113 | 13.08 | AGGGAUAUAACUCAGCGGUAGAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9030 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30391150-30391299 | + | 3,463 | 3.74 | AAGGCAGGGCUAGUGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9031 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30391901-30392574 | + | 18,031 | 19.48 | UUGCGUCGUUGUGCCUGGGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9033 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30408216-30408462 | - | 1,205 | 1.30 | CUGGGCAGUACCCGGCCGGGCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9034 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30408665-30408925 | + | 5,198 | 5.62 | GGAGAGAUGGCUGAGUGGACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9036 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30419519-30419761 | . | 688 | 0.74 | CAACAUAGGUCGUCGAAAGGAUCUCGGAGACUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9037 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30422050-30422417 | + | 58,229 | 62.90 | GGGUUGCUAACUCAACGGUAGAGUACUCGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9038 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30423800-30424137 | - | 65,463 | 70.71 | AACGCGUAAGAACCUGCCCUUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9039 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30425117-30425374 | + | 10,343 | 11.17 | CGGACGGGUGAGUAACGCGUAAGAACCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9040 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30428150-30428356 | - | 497 | 0.54 | UAGGGUUGGGCCAAGAGGGUCUCUUAACGCCCUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9041 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30428454-30428681 | - | 1,206 | 1.30 | UAAGAAGAAUGCUUGGCUGAUAAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9042 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30440553-30440791 | + | 914 | 0.99 | ACCUACUUAACUCAGUGGUUAGAGUAUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9043 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30441301-30441765 | - | 17,253 | 18.64 | GGCGUAACGAUCUGGGCACUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9044 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30443124-30443328 | - | 293,280 | 316.80 | GGGAUUGUAGUUCAAUUGGUCAGAGCACCGCCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9046 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30448058-30448668 | . | 1,610 | 1.74 | AGGGUCCCGUUGAAUUCUUAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9047 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30449054-30449272 | + | 3,067 | 3.31 | CUUUGGUAUAGGUUCAAAUCCUAUUGGACGCAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9057 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30843089-30843235 | + | 90,424 | 97.68 | AGGGCUAUAGCUCAGU | miR1766 | OtherRNA | ShortStack |
| ghr-b1.1r1-9058 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:30853454-30853613 | + | 396 | 0.43 | CGGUAGGUCGGACCA | miR7642 | OtherRNA | ShortStack |
| ghr-b1.1r1-9074 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:32893163-32893238 | - | 866 | 0.94 | AUCCUGCUGUCGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9076 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:33289603-33289622 | + | 315 | 0.34 | UCGGUAGACUUGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9082 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:34317600-34317650 | - | 12,057 | 13.02 | UAGAUGUCUUUGACAUCCAACUAUAGCACUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9084 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:36199723-36199950 | - | 10,059 | 10.87 | CCCGGGCGACUGUUUACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9112 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:37937207-37937398 | - | 558 | 0.60 | UGGGCUCAUGAACGCACACCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9118 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:38026582-38026763 | + | 4,051 | 4.38 | UUCUAGAACUGGUCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9135 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:39900435-39900538 | - | 2,631 | 2.84 | UGAUGUUUGUUGCGAUAAGGUGUUUGUGCUGAGCCAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9147 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:40826896-40827170 | + | 749 | 0.81 | CUCCAGAUCUCGGCUUGCUGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9148 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:40827370-40827494 | + | 437 | 0.47 | ACACUCGGUUGAUCUUAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9149 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:40828013-40828146 | + | 400 | 0.43 | CAUUGGACUUGAUUUUCUCAAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9150 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:40828338-40828465 | + | 93 | 0.10 | AAAGGAUGCUCAAGUGGUUGAAGGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9151 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:40828602-40828703 | + | 298 | 0.32 | AACUGAUGAUUCUGGAAAUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9152 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:40828797-40828939 | + | 238 | 0.26 | GCUUCUUGGAUUCUGUUCAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9153 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:40829319-40829587 | + | 1,011 | 1.09 | UACUGGACUGAAAUGCUCAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9154 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:40829770-40830041 | + | 200 | 0.22 | UCUUGCAGAGGAUCGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9162 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:41621954-41622166 | - | 977 | 1.06 | UGUAGUUCGACCGCGAAAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9166 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:41921335-41921397 | + | 125 | 0.14 | UAGAUGUCUUUGACAUCAAACUAUAGCACUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9193 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:43545738-43545868 | + | 161 | 0.17 | UGCUGUGUGGACAGAUACGGGUCAAACAUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9206 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:44759466-44759588 | - | 147 | 0.16 | UGCCCAGUGAUGGAAAACUCAUUGAAUGGAGCAGGACUGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9207 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:44759720-44760034 | - | 2,447 | 2.64 | AGAUCUUGAUAUCUGACACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9208 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:45045801-45046070 | . | 1,154 | 1.25 | AUACUCUGAGUGAUCUCCCUGUGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9211 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:45942899-45942914 | + | 150 | 0.16 | AUGAGAUGAUGAACC | miR6595 | OtherRNA | ShortStack |
| ghr-b1.1r1-9212 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:46091690-46091724 | - | 301 | 0.33 | UUGUUGGUCCCGAGGGACGGAGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9213 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:46205534-46205850 | + | 792 | 0.86 | UAAUCGAGAGCUCCAAGUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9214 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:46206812-46206998 | + | 1,660 | 1.79 | GAACGGGCUUGGCAGAAUCAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9215 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:46207317-46207566 | + | 6,162 | 6.66 | AAGUGUUGGAUUGUUCACCCACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9217 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:46493114-46493469 | - | 2,146 | 2.32 | AUCGAUCCUUUAGACCUUCGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9218 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:46493609-46493707 | - | 1,158 | 1.25 | GUUCGACUUUGUGAAAUGACUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9251 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:49244286-49244541 | + | 434 | 0.47 | AUUAGAGCCGACGAAAUUAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9255 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:50136902-50136960 | . | 61 | 0.07 | UAUUCUAUUCCUUUCGAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9257 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:50137274-50137421 | + | 262 | 0.28 | UAGAAAAAGAUUCGAAGUGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9258 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:50137554-50137611 | . | 218 | 0.24 | AUCUGAUUGAUGAGCCAUAAGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9259 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:50137758-50138365 | . | 1,859 | 2.01 | GAUUUCUCGUGCACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9270 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:51418481-51418497 | + | 795 | 0.86 | GGGGAUGUAGCGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9272 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:53593128-53593570 | - | 531 | 0.57 | UUCUUGGACACCAUGGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9275 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:55529566-55529581 | - | 141 | 0.15 | GCGUGUUGCACCCCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9337 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:57960355-57960425 | + | 331 | 0.36 | CCGGGCGAUGCCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9362 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:59392455-59392478 | - | 1,598 | 1.73 | ACAAUGGUCGGUACAGAGGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9375 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:60331555-60331850 | + | 5,880 | 6.35 | UUCGAAGUUCUCUGAUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9376 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:60331918-60332050 | + | 2,379 | 2.57 | CAAGAUGAGGAGAUCCGUUUGACAGCUGAAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9377 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:60332146-60332297 | + | 1,975 | 2.13 | AAGAACUGUGAAGAACACAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9388 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:60556710-60557032 | - | 412 | 0.45 | UGGCGCUGGUAGCAAGGCUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9389 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:60557115-60557154 | - | 87 | 0.09 | CUUGCUGUAAAAUCUGUUAGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9395 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:60994577-60994764 | . | 285 | 0.31 | AAGCGGGACGACAGCUCAAAAUCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9396 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:61002643-61002994 | + | 785 | 0.85 | AGCCGAACCUCUGAUCGACCUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9397 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:61003359-61003786 | + | 5,847 | 6.32 | AUGAGGAGGACGACAGACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9432 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:62208276-62208359 | + | 649 | 0.70 | CCUGCUGUCGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9441 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:62876285-62876559 | + | 3,112 | 3.36 | GCGUCCAUUGUCUAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9486 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:65595268-65595283 | + | 860 | 0.93 | GAUGAAGAACGUGGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9498 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:66667812-66667877 | + | 1,667 | 1.80 | CAACUAGUAGAAGUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9512 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:69637406-69638015 | + | 10,412 | 11.25 | CCCAGGGCUCUGACC | miR192 | OtherRNA | ShortStack |
| ghr-b1.1r1-9514 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:69642600-69642873 | + | 5,752 | 6.21 | CAUGUGAAGAAAUGAUCAAAAGGGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9515 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:69644373-69644821 | + | 2,119 | 2.29 | ACUAUUCUGGAUGUACAAUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9539 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:72254239-72254257 | - | 472 | 0.51 | GUUGCUGGUGUAGUGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9554 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:72496044-72496129 | - | 96 | 0.10 | UGUGACUGCUUCUCUGACUGGAGAAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9582 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:74730569-74730724 | + | 805 | 0.87 | AGGGAUAUAACUCAGCGGUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9587 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:75197994-75198094 | . | 195 | 0.21 | AGGGAACGGGCUUGGAAAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9589 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:75228701-75229312 | . | 4,695 | 5.07 | AAAAUCGUGAGGGUUCAAGUCCCUCUAUCCCCACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9637 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:78284102-78284856 | . | 3,499 | 3.78 | AUAUACAAAGUCAACAGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9650 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:79830418-79831186 | . | 4,271 | 4.61 | GUCAGUGUCGGCCGAGCAGAGUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9663 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:80295043-80295348 | + | 2,087 | 2.25 | UAAGAAGAAUGCUUGGCUGAUAAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9666 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:80296657-80296717 | + | 416 | 0.45 | GCACCCAGAGACGAGGAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9667 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:80299934-80300582 | + | 5,437 | 5.87 | CAAGGCUAAAUACUCCUGGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9670 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:80454382-80454397 | + | 216 | 0.23 | AACGACUCUCGGCAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9732 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:81722557-81722658 | + | 11,105 | 12.00 | GUGCGGCUGGAUCACCUCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9765 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83051810-83051872 | - | 911 | 0.98 | CCUGCUGUCGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9789 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83612806-83613270 | + | 7,242 | 7.82 | GGGGGCCGUGGCCUCUGAAACCCAAAAGCGGCAGAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9790 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83614206-83614355 | - | 16,507 | 17.83 | GGGAUUGUAGUUCAAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9791 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83617768-83617912 | - | 1,771 | 1.91 | GCGCUCUUAGUUCAGUUCGGUAGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9793 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83630633-83630823 | - | 893 | 0.97 | AUAGUAGGUAACCAGUUCUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9794 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83635060-83635325 | . | 71,948 | 77.72 | GUUCUGUAGUCAAAGCAACUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9795 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83638700-83639330 | - | 3,516 | 3.80 | GGGGGCCGUGGCCUCUGAAACCCAAAAGCGGCAGAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9796 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83640684-83640831 | + | 338 | 0.37 | AGGAGCAUUCGGUGGAACCGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9797 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83640909-83641029 | . | 297 | 0.32 | AGAAGUAAACCUGAAGUGUCGCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9798 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83647113-83647263 | - | 842 | 0.91 | GUCACGAUCUGAAAGGUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9799 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83647470-83647709 | - | 626 | 0.68 | AAUUAAUGGGACUUGGCUGGAAAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9800 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83653173-83653263 | + | 1,056 | 1.14 | GUUCGCUUGUCGUUGGGGCUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9801 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83653883-83654267 | - | 8,934 | 9.65 | CUCUUUAAAUCGCUGGGAAACG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9804 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83676757-83677410 | - | 49,587 | 53.56 | CGGAGGUGUGCGAAGGUAGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9805 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83679347-83679631 | - | 1,036 | 1.12 | UAUUGAUCGGUCUUGGUUUGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9806 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83682716-83683557 | . | 3,723 | 4.02 | CAAAUCAAUAGGAAAUGCUAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9807 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83684510-83684698 | - | 345 | 0.37 | CGUUCAAGAAAUGUAGCGGUUGCUCGACCAAAGCCGGUCAAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9808 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83690000-83690699 | - | 10,565 | 11.41 | UCUUUGUCAGCGGCAUUCCUCCUUGACUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9809 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83691704-83691991 | + | 1,209 | 1.31 | UAGCCGUAGAGAGACUUUUGAAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9810 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83697122-83697361 | - | 14,009 | 15.13 | CAGGAUGAAGCUUGGGUGAAACUAAGUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9811 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83698238-83698252 | + | 957 | 1.03 | CUACAGAGCGUGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9812 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83698726-83698771 | + | 363 | 0.39 | CUUCGCUCCGAGGGACCGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9813 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:83703523-83704262 | - | 12,655 | 13.67 | UCUUUGUCAGCGGCAUUCCUCCUUGACUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9835 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:84596355-84596370 | + | 315 | 0.34 | CUGCCUCUCCCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9843 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:85354796-85355137 | - | 414 | 0.45 | UUUGCCCCUGCUUCUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9845 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:85375830-85375850 | + | 887 | 0.96 | AAAUCCCACUCUCAACACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9857 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:85734219-85734236 | + | 1,369 | 1.48 | UCGAUACUGAUUGGCUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-9869 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:86056016-86056272 | - | 679 | 0.73 | AGGGAUAUAACUCAGCGGUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9878 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:86334214-86334249 | - | 147 | 0.16 | ACAAAUCGAGAAAUGGUCCAAAUUUUUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9879 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:86334389-86334425 | - | 194 | 0.21 | ACAAAUCGAGAAAUGGUCCAAAUUUUUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-9898 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:86441794-86441850 | - | 697 | 0.75 | GCUUUCAUAGCUCAGUUGGUUAGAGCACCCGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9957 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:88051739-88051755 | - | 87 | 0.09 | CUCGAGUUGCACCCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-9968 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:88458074-88458426 | - | 7,736 | 8.36 | GUUCCUCCGCAAGGUUCGUCCACGGAGGGUGAGUCAGGGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-9991 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:88735619-88735893 | + | 38,418 | 41.50 | GCUGCACUAUUGCAUGGGCCUGGCGCACCUCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-10051 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:89495004-89495187 | - | 323 | 0.35 | AAAGAUUUUAAUCUGUGGACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-10055 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:89572315-89572458 | + | 107 | 0.12 | UCUGAUCGGGCGUAAAAUCUUCAACCCCAAGUGGAAGCCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10066 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:89614454-89614525 | . | 427 | 0.46 | CUGCCGUCCACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-10159 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:91566966-91567553 | + | 655 | 0.71 | UAUAUUACUGAGAAUGAACUCUGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10173 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:91810114-91810136 | + | 269 | 0.29 | GGCAGUCUCCUUGGCUAAC | miR169 | OtherRNA | ShortStack |
| ghr-b1.1r1-10250 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:92935146-92935175 | + | 1,591 | 1.72 | UUUAACUCUGGCUUGCCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-10270 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:93307139-93307306 | - | 576 | 0.62 | CGACUUUGUGAAAUGACUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-10302 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:93642297-93642485 | - | 487 | 0.53 | UAGAGAAAGACAGAACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-10303 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:93642717-93642925 | - | 752 | 0.81 | AAUGGCUCAAGACUCAUGGCCCUGGGGACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-10304 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:93657945-93657963 | - | 704 | 0.76 | UUCCACGGCUUUCUUGAA | miR396 | OtherRNA | ShortStack |
| ghr-b1.1r1-10374 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:94382767-94382857 | + | 17,047 | 18.41 | UUCCACGGCUUUCUUGAACUU | miR396 | OtherRNA | ShortStack |
| ghr-b1.1r1-10483 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:95429449-95429469 | - | 950 | 1.03 | GAUGAGUGCUCUCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10526 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:95922619-95922705 | + | 2,127 | 2.30 | GUCUGGGUGGUGUAGUUGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10614 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:96949226-96949244 | - | 971 | 1.05 | UUCUACAGUCCGACGAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10626 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:96990031-96990140 | - | 124 | 0.13 | UUAUUAGUAACCUCUUCAGACAUUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-10642 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97047976-97048778 | - | 1,803 | 1.95 | CAAUGAUUUGUUUCCUUUUAUCGUGUGUUUUUGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10643 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97048890-97049250 | - | 1,068 | 1.15 | AGAGAUCGUUGACUUGUGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10644 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97049347-97049576 | - | 558 | 0.60 | CUGUCUUUGUGGAUCUUGAGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10648 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97059517-97060561 | . | 4,347 | 4.70 | GGGGAUAUAGCUCAGUUGGUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-10687 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97184024-97184115 | + | 918 | 0.99 | CUCGGAAUGCCCCUUAUCCUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10688 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97185578-97185608 | + | 196 | 0.21 | UUCUCGGAAUGCACCCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10697 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97214030-97214187 | . | 2,567 | 2.77 | AGCCGGAACAAGGACCAGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10744 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97376552-97377197 | + | 538 | 0.58 | UCACCCUCUUUCUCAUUUCACACGGGUUGUGGCGUAGUUUAAGCAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-10745 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97377825-97378207 | + | 715 | 0.77 | AUUAUAUUGUAUUCUUUGAGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-10763 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97521581-97522277 | + | 15,915 | 17.19 | UAACCAGACAAGGACACACGACAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10786 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:97635884-97635903 | + | 581 | 0.63 | CAGACUGUGAAACUGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-10937 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:98275296-98275384 | - | 2,684 | 2.90 | CGACUCCCACUGUGGUCGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-10940 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:98286817-98287516 | - | 2,756 | 2.98 | UUCCGUUCUCGUGUAGGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-10945 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:98298282-98298876 | - | 610 | 0.66 | UGUGCCGGACUGAUCAAAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-11014 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:98620304-98620386 | - | 730 | 0.79 | UCCGUUGUAGUCUAGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-11028 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:98721380-98721402 | + | 542 | 0.59 | CACGUCGGGUUCACCA | miR894 | OtherRNA | ShortStack |
| ghr-b1.1r1-11073 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:99033638-99033800 | . | 385 | 0.42 | AUUUGUGUCAGUGGGGGCCUGCGUUCGCGCGGCCCCUGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-11107 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:99165273-99165384 | - | 14,296 | 15.44 | GCUCUUGUAGCUCAGUUGGUUAGAGCACCCGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-11250 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:99818306-99818415 | - | 3,920 | 4.23 | GUCAGGAUGGCCGAGUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-11256 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:99869204-99869681 | - | 535 | 0.58 | CAGGCUUGAAUUCUUUUGGUGGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-11286 | Gossypium hirsutum (Upland Cotton) 1.1 | A03:100109817-100110520 | - | 825 | 0.89 | UUACUUGGAUCUGGUUUCUCAGUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-11308 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:64539-64936 | - | 545 | 0.59 | CAAUCAAAGCAGAGCUGAGCGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-11354 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:239232-240012 | - | 18,240 | 19.70 | AGAAUGUCGGCUUGAGUAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-11379 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:350581-350782 | . | 461 | 0.50 | UAUUUGAACAAAUAGGAUCGUCCGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-11436 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:498248-498481 | . | 602 | 0.65 | AACGGAUUCGAAAUUGUAACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-11444 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:535631-535706 | - | 480 | 0.52 | GCUGGAAUAGCUCAGUUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-11484 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:682090-682162 | - | 651 | 0.70 | GCUGGAAUAGCUCAGUUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-11561 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:1347764-1347907 | - | 364 | 0.39 | CUGCACUAGUACUGAGGCUCCAGGUCACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-11652 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:1705861-1705941 | + | 2,031 | 2.19 | GCGGGGAUAGCUCAGUUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-11688 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:1817303-1817412 | . | 399 | 0.43 | AAUACGAUUAAUCUGGCAUGGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-11700 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:2135880-2136022 | - | 12,604 | 13.62 | AGUUCGAAUCUCUCAGGCGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-11750 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:2555116-2555270 | - | 2,001 | 2.16 | GAGAAUUUCUGGAAGGGCUUCCUUUGGGGUAAAGCCCUAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-11777 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:2715089-2715500 | + | 1,773 | 1.92 | AUCAGAGUGGCGCAGCGGAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-11792 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:2886646-2886698 | + | 161 | 0.17 | AGAAAGUUUGGGAUCGAUCGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-11815 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:3348465-3348578 | - | 12,459 | 13.46 | GCGUUUGUAGUCCAACGGUUAGGAUAAUUGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-11834 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:3395275-3396213 | - | 766 | 0.83 | AGUUGGAGGAUGGUCGAACUUUAGCAGACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-11842 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:3496969-3497203 | - | 7,540 | 8.15 | ACUAGCUUACGCUCUGACCCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-11853 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:3675053-3675071 | + | 568 | 0.61 | GGAGGAAGGGUUGUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-11913 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4246946-4247384 | . | 9,391 | 10.14 | AAUCAUGUGGGCUCU | miR5724 | OtherRNA | ShortStack |
| ghr-b1.1r1-11917 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4248915-4249036 | + | 4,577 | 4.94 | GUGGACGUGCCGGAGUGGUUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-11922 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4302315-4302451 | + | 71,034 | 76.73 | GUGGACGUGCCGGAGUGGUUAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-11925 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4320937-4321039 | + | 7,581 | 8.19 | GUGGACGUGCCGGAGUGGUUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-11926 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4321066-4321110 | + | 145 | 0.16 | CUUUUGUACUGUAUUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-11941 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4385150-4385186 | + | 158 | 0.17 | UCUGAAGGUCGCGUGUUCGUUCCAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-11942 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4385249-4385346 | + | 442 | 0.48 | AAGAGCGGGGAUAGAUCAGUUGGGAGAGCGUCAGACUGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-11944 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4407150-4407223 | + | 906 | 0.98 | AAUUGCGGGGAUAGCUCAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-11946 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4408933-4409175 | + | 1,935 | 2.09 | GCGGGGAUAGCUCAGUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-11975 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4628585-4628831 | + | 6,422 | 6.94 | CAAGGCUAAAUACUCCUGGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12013 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:4979517-4980147 | + | 258 | 0.28 | UGUACUAAUAUGGAAUGAAUCAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-12031 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:5238274-5238798 | . | 1,778 | 1.92 | AUCAACAAAUUCAACUCCGCAUUGUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12060 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:5532313-5532505 | - | 705 | 0.76 | CGGUGGAGCAUGUGGUUUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12063 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:5948943-5949671 | - | 13,511 | 14.59 | AAGGAACUCGGCAAAAUAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12066 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:5975097-5975369 | + | 342 | 0.37 | GUCUGUCUUAUGUCUGAGUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12110 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:6389902-6389971 | . | 181 | 0.20 | CCCACCGUGGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12116 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:6531873-6532172 | . | 1,975 | 2.13 | AUUCACUCGUGGGAUCUGGGCGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12280 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:8083412-8083649 | + | 1,541 | 1.67 | CCCAAGAUGAGUGCUCUCCUAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12346 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:9042213-9042252 | + | 191 | 0.21 | AAUCGGACCUUUGACUCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12380 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:9796056-9796452 | - | 13,355 | 14.43 | CCAAGAUGAGUGCUCUCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12433 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:11130561-11130658 | - | 11,266 | 12.17 | GCUGGAGUAGCUCAGUCGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12445 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:11588770-11588949 | . | 1,220 | 1.32 | UACCGAACUGAACUCAUAGAGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12466 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:12125251-12125506 | . | 4,368 | 4.72 | AAGGCAAAGUGAAUUCUCCCUAGAUACAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12469 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:12127600-12127954 | + | 28,264 | 30.53 | AUUGUCACUGCUUAUGGACCCGAACCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12470 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:12128600-12128854 | - | 3,241 | 3.50 | GGGGUCGCUUCUGUAACUGGAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12471 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:12129954-12130467 | - | 2,494 | 2.69 | GGGGAUAUAGCUCAGUUGGUAGAGCUCCGCUCUUGCAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12472 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:12131620-12131673 | + | 14,893 | 16.09 | GGGAUUGUAGUUCAAUUGGUCAGAGCACCGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12473 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:12131956-12132167 | + | 1,354 | 1.46 | UGGGGCGUGGCCAAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12478 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:12406676-12406868 | . | 318 | 0.34 | UAGCUUCCAUUGAGUCUCUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-12483 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:12819728-12819743 | - | 332 | 0.36 | CGGCGGGUAGAAUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12499 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:13303452-13303667 | + | 607 | 0.66 | GCAAGAAGAUCAAGACCGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12500 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:13305148-13305454 | + | 1,160 | 1.25 | UAGCCGGAAUUCUUGC | miR10068 | OtherRNA | ShortStack |
| ghr-b1.1r1-12503 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:13517778-13517793 | + | 218 | 0.24 | GGAGAGAUGGCUGAGC | miR3473 | OtherRNA | ShortStack |
| ghr-b1.1r1-12514 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:15194389-15194406 | + | 1,149 | 1.24 | CGGUCUGGGAUAACCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12518 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:15958708-15958755 | - | 524 | 0.57 | ACAAAUUCAGACUGUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12519 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:16442922-16443236 | - | 22,428 | 24.23 | AAUGCAUCGGUAGGGGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12530 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:18037387-18037428 | + | 1,361 | 1.47 | GCUGGUGAUGGAUUGCUGAAGCAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12532 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:18708253-18708633 | . | 824 | 0.89 | CAUUCAUGGCUAACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12548 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:22766244-22766261 | - | 262 | 0.28 | GGGAUUGUAGUUCACGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12552 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:24793669-24793811 | - | 602 | 0.65 | UACGGAAAGUAGAAAUGGAGGCGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12553 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:24795161-24795335 | - | 730 | 0.79 | UGGGGCGUGGCCAAGUGGUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12554 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:24795755-24795919 | - | 5,017 | 5.42 | CAAAUCCUGUCAUCCCUACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12555 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:24797713-24797924 | + | 453 | 0.49 | ACCCAAAGCUAUGGAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12556 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:24798363-24798665 | - | 2,072 | 2.24 | UCCUCAGUAGCUCAGCGGUAGAGCGGUCGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12557 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:24799908-24800425 | + | 11,734 | 12.68 | GCCCCCAUCGUCUAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12559 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:24844750-24845162 | . | 2,255 | 2.44 | AAAGUGAUGUAUGCAGCUGAGGCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12562 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:24980137-24980153 | + | 432 | 0.47 | AGAUUAGUGGAACGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12575 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:26031185-26031469 | + | 10,366 | 11.20 | CAGCGCCGGGCAGCUAAGUUGGUAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-12610 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:28797465-28797533 | - | 439 | 0.47 | UUCGGAUUGUCUUAUGGCAUGUAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12637 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:32480623-32480955 | - | 10,497 | 11.34 | AUGAGGAGGACGAUAGACCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12642 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:32991570-32991940 | + | 334 | 0.36 | GACGGAUCACAUGACAUUAAAAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-12647 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:33385551-33385567 | + | 483 | 0.52 | AGAUUAGUGGAACGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12649 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:33827356-33827554 | + | 5,368 | 5.80 | CGAUUCCCGCUACCCGCUCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12664 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:36670905-36670962 | - | 649 | 0.70 | ACCCUGCUGUCGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12672 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:36893912-36893972 | - | 414 | 0.45 | CGGUGACGAUACUGUAGGAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12685 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:37430651-37430869 | - | 3,724 | 4.02 | CGAAUCCCUCCUCGCCCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12686 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:37430957-37431075 | - | 299 | 0.32 | AAUAACUAUCUUUGUAGCUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12714 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:40213317-40213435 | + | 6,435 | 6.95 | CCGGUUGGGCCCUCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12733 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:40759992-40760009 | + | 422 | 0.46 | CGGGGAGUAGCUCAGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12750 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:41306889-41307057 | + | 489 | 0.53 | AGGAUCGUAACCUGGCUCUGAUACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12771 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:43264163-43264443 | + | 459 | 0.50 | UUUCGGCUUUGUAACUUACAAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-12786 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:44132174-44132204 | + | 55 | 0.06 | UCGAAGUCGAGAGCUCCGACACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12793 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:44383623-44383641 | - | 2,793 | 3.02 | UUCCCCGCACCUCCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12798 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:44495333-44495762 | + | 455 | 0.49 | ACCAUCGAUAUUGCCCUCUGGAAGUUUGAAACUACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12852 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:46623100-46623371 | - | 11,035 | 11.92 | GCGGAUAUAGUCGAAUGGUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12873 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:48546140-48546213 | + | 7,684 | 8.30 | GCCGUCUUAGCUCAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12893 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:49656949-49656990 | - | 1,698 | 1.83 | CCGCCCGUCACACUAUGGGAGCUGGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12894 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:49657630-49657697 | - | 1,282 | 1.39 | UAGAGAUCGGAAAGAACACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12895 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:49658043-49658415 | - | 824 | 0.89 | UGCUUAACACAUGCAAGUCGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-12944 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:50927275-50927363 | - | 1,573 | 1.70 | UUUUUCCAUGCUGAGAUCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12945 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:50927468-50927692 | - | 2,889 | 3.12 | CUAAUCACAUACUGAGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-12964 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:51295708-51295950 | . | 683 | 0.74 | UUUAAAACUGAUGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-13023 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:52770942-52771068 | + | 68,569 | 74.07 | GGGGAUGUAGCUCAGAUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-13034 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:53199624-53199643 | - | 2,010 | 2.17 | CUCUCAAUGAAAGCACCA | miR10423 | OtherRNA | ShortStack |
| ghr-b1.1r1-13039 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:53225555-53225614 | - | 4,784 | 5.17 | GGGGAUGUAGCUCAGAUGGUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-13079 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:53726163-53726253 | - | 531 | 0.57 | CGAAAUCUGUUGGGCAUUGCCUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13080 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:53729256-53729411 | - | 223 | 0.24 | UGAGACUGCAAAGCUAAAGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13107 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:54204000-54204275 | - | 1,674 | 1.81 | AUUCGGAAGGAUUGUAUCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13194 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:55854777-55854850 | - | 1,385 | 1.50 | GUUGAGAUGGCCGAGUUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13195 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:55864632-55864727 | - | 382 | 0.41 | GUUGAGAUGGCCGAGUUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13201 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:55949996-55950319 | - | 164 | 0.18 | AUUUGUUGAGAAAUUAAGAUCCAGCUCUGAUAUGUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13202 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:55950867-55951136 | - | 181 | 0.20 | UGGUAUUCACGUAUGAAAUUGGCAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13214 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:56076197-56076400 | + | 447 | 0.48 | CUUGGAGGAGAAUUCUGUGAGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-13226 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:56272090-56272175 | - | 1,503 | 1.62 | GUUGAGAUGGCCGAGUUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13257 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:57001956-57002095 | + | 8,957 | 9.68 | AGGGCUAUAGCUCAGUUGGUAGAGCACCUCGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-13273 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:57206474-57206490 | - | 1,180 | 1.28 | AGGGGGUAGAGCACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13274 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:57211069-57211313 | . | 946 | 1.02 | UUCGCGCGGCCCCUACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13319 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:57528836-57529845 | - | 16,795 | 18.14 | GUCGUUGUAGUAUAGUGGUGAGUAUUCCCGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-13322 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:57532838-57533009 | - | 9,011 | 9.73 | GUCGUUGUAGUAUAGUGGUAAGUAUUCCCGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-13355 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:58214857-58214923 | + | 1,256 | 1.36 | ACCCUGCUGUCGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-13375 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:58354133-58354214 | + | 1,633 | 1.76 | UCCGUUGUAGUCUAGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13376 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:58356728-58356829 | - | 5,944 | 6.42 | UCCGUUGUAGUCUAGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13379 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:58367354-58367440 | - | 7,964 | 8.60 | UCCGUUGUAGUCUAGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13380 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:58379391-58379471 | + | 643 | 0.70 | UCCGUUGUAGUCUAGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13384 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:58399996-58400052 | + | 3,722 | 4.02 | UCCGUUGUAGUCUAGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13386 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:58402433-58402522 | + | 3,465 | 3.74 | AGGAUACUCGGCUCUCACCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13495 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:59502589-59502703 | + | 1,067 | 1.15 | CAGCGGGAGGCCCGCACGACGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-13512 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:59645028-59645578 | - | 86,261 | 93.18 | CGGAGAAGAAGCAAUGACGGUAUCUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13513 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:59646100-59646309 | - | 1,998 | 2.16 | GAGAAGAAGCAAUGACGGUAUCUGGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13558 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:60002442-60003372 | - | 1,287 | 1.39 | GAGGUUUGAUGGUGCCUUGAAUGUCGAUGUGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-13559 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:60003505-60003941 | - | 463 | 0.50 | UCUUCGUGGAUCUUGAACCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-13577 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:60073993-60074076 | + | 3,056 | 3.30 | GCUGGAGUAGCUCAGUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13598 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:60280892-60281512 | . | 10,189 | 11.01 | AUGACUGCAAUUUUAGAGAGACGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-13648 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:60506434-60506564 | - | 284 | 0.31 | CAAGAACAAGAACAAGAAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-13665 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:60549877-60549948 | - | 653 | 0.71 | GUCAGGAUGGCCGAGUGGUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13715 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:60705532-60706129 | + | 11,307 | 12.21 | ACCUUAUUGACCGCAACUUCUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13869 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:61610487-61610580 | - | 2,057 | 2.22 | CUCAGCCGGUAGAGC | miR10837 | OtherRNA | ShortStack |
| ghr-b1.1r1-13874 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:61633829-61633857 | - | 760 | 0.82 | GCCGUCUUAGCUCAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13884 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:61669665-61669774 | - | 618 | 0.67 | GCCGUCUUAGCUCAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13890 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:61726886-61726986 | - | 5,417 | 5.85 | GCCGUCUUAGCUCAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-13895 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:61752392-61752417 | + | 440 | 0.48 | UAUUACUGACUCUCACCCUUUGUAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-13992 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:62237344-62237411 | - | 183 | 0.20 | UUAUUGGGUGAACCUCUGGAUUUUCUCGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14063 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:62544875-62544990 | - | 5,655 | 6.11 | AAACACCCGAUCCCAUUCCGACCUCGAUAUGUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-14100 | Gossypium hirsutum (Upland Cotton) 1.1 | A04:62730810-62730870 | + | 646 | 0.70 | GCUGGAAUAGCUCAGUUGGUUAGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-14166 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:723265-723311 | + | 159 | 0.17 | ACCGUACUUGUAUAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14186 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:893817-894359 | + | 603 | 0.65 | UGACCCGGUUGUGAACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-14213 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:1189483-1189593 | - | 53,487 | 57.78 | GUGGGCGUGCCGGAGUGGUUAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-14251 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:1414610-1414654 | - | 654 | 0.71 | AAGAGUUAGAGAGAAACUGUGGAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14380 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:2887234-2887914 | + | 691 | 0.75 | CGGACCUGAAUCAUAUAAGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14392 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:3012008-3012374 | - | 514 | 0.56 | ACUUGUCGACGAGUGUGACGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-14415 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:3372239-3372323 | + | 785 | 0.85 | GUCGUUGUAGUAUAGUGGUGAGU | miR6300 | OtherRNA | ShortStack |
| ghr-b1.1r1-14437 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:3605926-3607099 | + | 939 | 1.01 | ACGGAUCUUACUGGAUUGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14485 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:4135001-4135104 | - | 1,372 | 1.48 | GUCGAUAUGUCCGAGUGGUUAAGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-14501 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:4359149-4359306 | + | 58 | 0.06 | GGCAGAGAUGAUGAAGAACACAAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14503 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:4368277-4368583 | . | 1,537 | 1.66 | UGCUACUAAUACUUGUACUUGCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-14504 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:4370259-4370402 | + | 183 | 0.20 | ACAGAUGACAAAGCUGUAGUGUGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-14542 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:4677554-4677650 | + | 2,242 | 2.42 | GCUUUCAUAGCUCAGUUGGUUAGAGCACCCGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14555 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:4872762-4873016 | - | 1,742 | 1.88 | CUAGACGUAGAGCGCGCAGGGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14735 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:6397897-6397977 | + | 537 | 0.58 | AGACGAUGUAGAAGCUGUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14781 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:6796051-6796217 | + | 9,196 | 9.93 | UCCGUUGUAGUCUAGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-14796 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:6876868-6877126 | - | 1,476 | 1.59 | GUAUUAUGGCACCUAGGACUGUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-14797 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:6877618-6877788 | - | 638 | 0.69 | AUUGGAACUGAGCUCGCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-14798 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:6878115-6878174 | - | 289 | 0.31 | CUCGGUGGAACCGCCA | miR9995 | OtherRNA | ShortStack |
| ghr-b1.1r1-14814 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7049022-7049171 | - | 1,151 | 1.24 | AUGGAGCCUCGAGUGAAGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-14816 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7054017-7054116 | - | 667 | 0.72 | CCGACCUUAGUUCAGUUGGUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-14861 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7454883-7455104 | + | 8,184 | 8.84 | GGGAUUGUAGUUCAAUUGGUCAGAGCACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-14862 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7455850-7456720 | + | 136,363 | 147.30 | GAAUGAUUGGGCGUAAAGCGUCUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-14863 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7457455-7457616 | + | 2,464 | 2.66 | GGAGAGAUGGCUGAGUGGACUAAAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-14864 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7458400-7458577 | - | 1,670 | 1.80 | ACUACAUAGAUCUAUGGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-14866 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7464754-7464959 | + | 294 | 0.32 | AUUGUGCUCUGAUUCAUUACUGAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14898 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7757396-7758337 | . | 5,865 | 6.34 | AUAGGUUGUUAGAAGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-14908 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7820996-7821134 | + | 30,890 | 33.37 | GCGUUUGUAGUCCAACGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14914 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7856753-7857645 | + | 1,115 | 1.20 | GAUGAGAUGGAGUUCACUGAAGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14919 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7911253-7911314 | + | 772 | 0.83 | GUCGUUGUAGUAUAGUGGUGAGUAUUCCCGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-14926 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:7953955-7954165 | + | 950 | 1.03 | CCGGUGGGACCUCCA | miR9993 | OtherRNA | ShortStack |
| ghr-b1.1r1-14970 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:8361920-8362059 | + | 3,298 | 3.56 | GUGGCUGUAGUUUAGUGGUAAGAAUUCUACG | | OtherRNA | ShortStack |
| ghr-b1.1r1-14980 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:8452083-8452300 | - | 411 | 0.44 | AAGAAUGUUUUAGGAUUAGGAAUAGGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15006 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:8607300-8607439 | + | 264 | 0.29 | GAAGCAUCCUGCUGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15073 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:9186163-9186244 | + | 721 | 0.78 | CCGACCUUAGCUCAGUUGGUA | miR6478 | OtherRNA | ShortStack |
| ghr-b1.1r1-15083 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:9318193-9318733 | - | 108,770 | 117.49 | GGGAUUGUAGUUCAAUUGGUCAGAGCACCGCCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15090 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:9346825-9346910 | + | 309 | 0.33 | GCACCAGUGGUCUAGUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15159 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:10075411-10075428 | + | 125 | 0.14 | GAUGAAGAACGUAACGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15217 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:10704420-10704520 | + | 1,382 | 1.49 | GUCGUUGUAGUAUAGUGGUGAGUAUUCCCGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15248 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11023315-11023424 | - | 939 | 1.01 | GCCCGUCUAGCUCAGUCGGUAGAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15268 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11150112-11150284 | - | 5,995 | 6.48 | UAGCAGGGAUUGUGUGUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-15275 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11262815-11262924 | - | 426 | 0.46 | ACGCUUGGCUUCUGAGCUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15285 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11360626-11360687 | - | 107 | 0.12 | UGAGACUUAAGAUCUGGAAAUGGACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15301 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11482691-11482854 | - | 5,013 | 5.42 | UGGCUCUUCUGUGACAUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15325 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11738622-11738788 | + | 1,052 | 1.14 | GACGCUUUGGCCGAGUGGUUAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15326 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11741150-11741202 | + | 304 | 0.33 | GACGCUUUGGCCGAGUGGUUAAGGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15339 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11807172-11807410 | + | 6,067 | 6.55 | GUUGAUUCUAGUUCUUGGAGUUCGGGAACUCCUAAAUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15349 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11896241-11896525 | - | 394 | 0.43 | AGAACAUGACGGACACUGAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15352 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11934164-11934575 | . | 1,815 | 1.96 | UUACAUAAAGAUAUCGUUGGUAAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15353 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11962992-11963152 | + | 232 | 0.25 | CAAGGAAGGCGGUAGAUUAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15354 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11963265-11963453 | . | 663 | 0.72 | AAACGGAGCCUGGAUGUAAUAUCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15355 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:11967100-11967526 | . | 1,454 | 1.57 | UGCUGGUUGGGCCGGUUCAAUGGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15370 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:12065541-12066517 | + | 949 | 1.03 | UUCCAUCCUUCUUUCGGCUCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15438 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:12701406-12701545 | + | 1,142 | 1.23 | UACUACUUUCUGAUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15448 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:12821328-12822273 | - | 2,692 | 2.91 | GAGAACUUGGCUGACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15466 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:12943130-12943209 | + | 3,610 | 3.90 | AUCUUUCGGCUGAGAUUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15467 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:12943326-12943477 | + | 307 | 0.33 | GUUGCCCGUGGUAUCUGAUGUCCAGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15479 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:13024916-13025162 | - | 3,035 | 3.28 | CCUGGACGGGGUCAAUGGAUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15485 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:13124874-13124942 | + | 11,278 | 12.18 | UUCAUUGUCGUCCAGUGGUUAGGAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-15486 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:13134293-13134376 | + | 799 | 0.86 | UGCCAAUGGAGAUUUGCCCCG | miR399 | OtherRNA | ShortStack |
| ghr-b1.1r1-15504 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:13311420-13311994 | . | 7,462 | 8.06 | GUUAUCCGGAAUGAUUGGGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15554 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:13830656-13831679 | + | 3,073 | 3.32 | ACACACACAAGUAAAGCAUUAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15558 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:13857288-13857368 | - | 396 | 0.43 | CGAUGUAGUAGCUGGGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15566 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:13896707-13896760 | + | 333 | 0.36 | AGGCUGAGUCGGAUAUAGAUGGCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-15582 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:14158832-14158986 | - | 14,586 | 15.76 | UUCGAUCCUGGGCAGCAACACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-15609 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:14457058-14457073 | + | 340 | 0.37 | CCCGGUAGGACCUCCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15616 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:14569374-14569466 | - | 1,155 | 1.25 | GUCGUUGUAGUAUAGUGGUAAGUAUUCCCGC | miR6300 | OtherRNA | ShortStack |
| ghr-b1.1r1-15639 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:14787919-14788481 | - | 649 | 0.70 | UUGUCUACUUUAUAACGAUUGCAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15640 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:14788877-14789052 | - | 435 | 0.47 | CGACUCAAGGAGUGGUGAACGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15641 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:14789834-14789948 | - | 187 | 0.20 | UGUGUCGUGGGUGGCAGCGGAUUCGUUGCCUCAUUGCUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15646 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:14830161-14830256 | - | 12,546 | 13.55 | GUCUGGGUGGUGUAGUUGGUUAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15654 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:14914994-14915916 | + | 1,868 | 2.02 | AUGAACAAGAAGACUACGUAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15655 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:14916004-14916304 | + | 356 | 0.39 | AAGACUGGCGCUGGACAAAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15669 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15020528-15021260 | - | 4,227 | 4.57 | CUCACAGUGUCGGCAGAACUCACUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15670 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15021328-15021497 | - | 1,475 | 1.59 | AAGAGACGGUAGAAGGAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15671 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15021838-15022015 | - | 1,009 | 1.09 | ACAGACAGGAGCUUUGGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15672 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15022126-15022453 | - | 1,317 | 1.42 | CCAAGGUCUUGUUAUGAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15680 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15108602-15109238 | - | 1,022 | 1.10 | AGGACUUGGAGCUCGA | miR163 | OtherRNA | ShortStack |
| ghr-b1.1r1-15681 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15109921-15110521 | - | 565 | 0.61 | UGAAUGCAGGCUGUAGGGAUAAAGAUCUGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15713 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15292220-15292367 | - | 264 | 0.29 | GUUGCUCGUCCACAUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15728 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15391179-15391534 | - | 5,264 | 5.69 | GAAUGGCUUCUAAAGCCUUGCUGUUAUUCUGCAAUUCUGAGCCCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15729 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15391644-15391858 | - | 775 | 0.84 | UGGGACUUGCCAUGAGACGUACAUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15776 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15871484-15871542 | + | 25 | 0.03 | CUUUGUCGCUUCGAUAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15783 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:15978963-15979210 | + | 25,614 | 27.67 | GAGAAUUUCUGGAAGGGCUCCCUUCGGGGUAAAGCCUAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15789 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:16045603-16046410 | + | 3,311 | 3.58 | GAGAAGAUUGUGUUCAAGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15793 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:16069147-16070039 | + | 811 | 0.88 | GAGGAUGAACGGUGAUGAGAACGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15832 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:16523135-16523276 | + | 709 | 0.77 | UACAGUCCGACGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15853 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:16687152-16687312 | + | 264 | 0.29 | UGCGGAUGAAGAGAAAUGUGAAAUAUACAGUUAUCCCUGGCUGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15854 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:16687470-16687554 | + | 768 | 0.83 | UGUGGAUGAUGAGAAAAUUUUGAAAUCAGUUAUCCCUGGCUGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15871 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:16821619-16821639 | + | 124 | 0.13 | GUUGAGAUGGCCGAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15895 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:17056603-17056804 | + | 435 | 0.47 | UGGAAAUGACUGUUUGCUGAGUUGCAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-15896 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:17057451-17057646 | + | 324 | 0.35 | AUAGACUGAAAAAUAUGAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15906 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:17130347-17130408 | - | 1,433 | 1.55 | GGGGAUGUAGCUCAGAUGGUAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-15913 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:17257476-17257693 | - | 27,091 | 29.26 | AGGGCUAUAGCUCAGUUGGUAGAGCACCUCGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15932 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:17421528-17421588 | + | 439 | 0.47 | UCCGUUGUCGUCCAGCGGUUAGGAUAUCUGGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-15955 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:17641646-17641726 | - | 1,331 | 1.44 | CUCAAGCACUUCUGAGCCGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-15956 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:17651131-17651816 | . | 12,833 | 13.86 | AUCACUAGUAGAUCCGUAUAGGCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-16007 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:18341969-18342069 | - | 7,026 | 7.59 | GCGCCUGUAGCUCAGUGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-16008 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:18346448-18347021 | - | 26,299 | 28.41 | UAAAGCGUCUGUAGGUGGCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-16074 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:18901590-18901660 | - | 1,156 | 1.25 | GCAGAAGGUCGUAGGUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-16083 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:18948193-18948867 | + | 9,672 | 10.45 | AGGGAUAUAACUCAGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-16229 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:20140179-20140257 | + | 1,188 | 1.28 | UCCAUUGUCGUCCAGUGGUUAGGAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-16233 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:20166368-20166628 | - | 300 | 0.32 | UUCUCAAGACUCUCGAUGCUUUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-16259 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:20311818-20311912 | + | 3,875 | 4.19 | CGAGCCUCUCUCACCCCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-16290 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:20627069-20627506 | + | 714 | 0.77 | UCAAGGACACUCAUGGAGACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-16296 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:20652640-20652744 | - | 1,746 | 1.89 | AACAAGCCCGUCUAGCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-16352 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:21062379-21062469 | + | 488 | 0.53 | ACCCUGUUGUCGACGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-16386 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:21289518-21289578 | - | 521 | 0.56 | AGAAAUCCUCUGCAACAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-16451 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:21715635-21715667 | + | 323 | 0.35 | GAUAUGCAGAUUCUGACAAAAUUACUGGCAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-16545 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:22669467-22669737 | + | 1,542 | 1.67 | CGGUUGGGCCCUCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-16575 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:23054076-23054095 | + | 255 | 0.28 | UGAAAUCGAGUAGGACG | | OtherRNA | ShortStack |
| ghr-b1.1r1-16607 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:23702702-23702830 | - | 1,903 | 2.06 | AUGAGAUCUGAGGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-16608 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:23704243-23704316 | - | 3,397 | 3.67 | GCUAUGAGAUCUGAGGGCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-16622 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:23855049-23855487 | - | 1,274 | 1.38 | CGAAGCACCUGAGCGAUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-16623 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:23855570-23855708 | - | 505 | 0.55 | ACAGAAUCAUCAAUGGCUUGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-16624 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:23856159-23856238 | - | 208 | 0.23 | UCUUGCCUGAAGGUCUGUUAGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-16625 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:23856367-23856650 | - | 538 | 0.58 | CUUUCAAGACCGUUGCUCUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-16712 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:24619279-24620564 | . | 155,944 | 168.45 | CUGCGUAGAUUGACUGAACGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-16750 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:25070443-25070650 | - | 5,469 | 5.91 | CUUCCAUGACUCUGAUGCGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-16765 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:25203578-25204429 | + | 58,331 | 63.01 | AGAUCUUGAUAUCUGACACUG | | OtherRNA | ShortStack |
| ghr-b1.1r1-16821 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:25585495-25585574 | + | 206 | 0.22 | AAGUCCGUUGUUGUCCAGCGGUUAGGAUGUCUGGCUUUCACCCCGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-16868 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:26071059-26071077 | - | 295 | 0.32 | AUCCCAGCAGCCACACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-16995 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:27114632-27114900 | - | 468 | 0.51 | ACGAGAAGGAAGGACACACGGACUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-17050 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:27708448-27708619 | - | 329 | 0.36 | AGGAGAAGAGCUUCAGUGCAGUGGCAGUAGCGUGCUAGGCCUGUCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-17106 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:28378618-28378637 | - | 3,057 | 3.30 | UCCCGUUGAAUUCUUAAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17207 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:29434089-29434232 | - | 796 | 0.86 | UUAGGGACUCAUGUCAGCCCCUUUUGCAGAACUCUCUAAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17358 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:31968000-31968453 | - | 732,615 | 791.36 | AACAGACCGGUAGACUUGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-17384 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:32175031-32175570 | + | 13,542 | 14.63 | UUCGGGACCUGCAUGGGCCACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17404 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:32391856-32391918 | - | 785 | 0.85 | GACCGCAUAGCGCAGUGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17486 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:33655452-33655763 | + | 12,685 | 13.70 | AGGCAGGGCUAGUGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-17487 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:33656780-33657411 | . | 3,829 | 4.14 | GCCCUUUUAACUCAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17502 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:33856758-33856924 | . | 1,277 | 1.38 | ACCCAUUUUUUAGUCAAUCGUCGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17627 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:35788960-35788974 | - | 1,036 | 1.12 | CUACAGAGCGUGCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17689 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:36378834-36379204 | + | 476 | 0.51 | UCCCGAAACGUCGAAACUGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-17745 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:37920528-37920917 | + | 12,810 | 13.84 | AUAUACAAAGUCAACAGAUCUCACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17759 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:38063529-38063642 | + | 1,333 | 1.44 | CGAUAAAAUUGGAACGAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17760 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:38064668-38064692 | . | 203 | 0.22 | ACAAAUCGAGAAAUGGUCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-17779 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:38526404-38526680 | + | 1,878 | 2.03 | UCAGUUGGUAGAGCACCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17801 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:39429076-39429173 | - | 3,388 | 3.66 | GCGCCUGUAGCUCAGUGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17810 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:39797307-39797503 | + | 4,637 | 5.01 | CGCUUGUCGUUGGGGCUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17822 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:40622629-40622799 | . | 440 | 0.48 | CUAAAUGAUGAACUCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-17837 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:41464119-41464135 | + | 242 | 0.26 | CCCUGUAGGACCUCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17870 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:43455268-43455296 | - | 240 | 0.26 | UUUUACCAUGACUGCAAUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17881 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:44579214-44579231 | - | 150 | 0.16 | AGGAACGGAUGGGGGCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17901 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:44978033-44978250 | - | 4,370 | 4.72 | GUCGAUAUGUCCGAGUGGUUAAG | | OtherRNA | ShortStack |
| ghr-b1.1r1-17911 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:45032553-45032733 | + | 1,738 | 1.88 | UGCACUGUAUAUAUAUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17935 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:46630264-46630439 | - | 55,438 | 59.88 | CCCGGGCUCAGACACCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17941 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:47747465-47747482 | - | 167 | 0.18 | AAGAUCUCUGAGGCCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-17957 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:49260953-49261203 | + | 1,882 | 2.03 | UGUAGGCAUUAUUUUUUUUCUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17961 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:50230986-50231060 | + | 329 | 0.36 | AAUUCCGUCCAAGGCUAAAUACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17962 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:50231935-50232307 | . | 691 | 0.75 | CGGGGCUAGUUGAUUCGGCAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17963 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:50233494-50233789 | + | 1,181 | 1.28 | GGAAGUCGGCAAAAUGGAUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17964 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:50234001-50234285 | + | 2,045 | 2.21 | CUGUCCCUGUCUACUAUCCAGCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17965 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:50234521-50234660 | . | 782 | 0.85 | AAAAAAGCAACGUCGCUAUGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-17966 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:50234776-50235126 | + | 4,658 | 5.03 | UGAAUCUCAGUGGAUCGUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17969 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:51142598-51142637 | + | 149 | 0.16 | CGAGUGAAUCCUGUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-17985 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:51709199-51709274 | + | 368 | 0.40 | AUGGCUGUCGUCAGCUCGUGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-17989 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:52175311-52175332 | - | 78 | 0.08 | GCGGAAAUGAACGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18002 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:54474514-54474601 | + | 18,187 | 19.65 | GGUGUCGUGGUGUAGUUGGUUAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18029 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:56766991-56767141 | + | 802 | 0.87 | UAUUCGCUCGGCCAAUCGUCGGAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18067 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:60653775-60653793 | + | 114 | 0.12 | AUCUGGUUCCUGGCACAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18079 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61678329-61678434 | - | 234 | 0.25 | AGAAGAUCCUGAAUUUGAGACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18080 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61678595-61678719 | - | 630 | 0.68 | GUGCUACCGUAGAGAAUACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18081 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61678951-61679455 | - | 1,089 | 1.18 | CUGUGGACAUUUGUUGCUCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18082 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61680401-61680437 | . | 105 | 0.11 | UAGAGAUGAAAUUGGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18085 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61852722-61853950 | . | 9,148 | 9.88 | CCGGUCUGCUCGUCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18086 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61861073-61862908 | + | 11,727 | 12.67 | UAGGUGAACCUGCGGAAGGAUCAUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18087 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61863201-61863341 | + | 2,624 | 2.83 | CAUGUCUGCCUGGGUGUCACGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18088 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61863711-61865720 | + | 23,373 | 25.25 | GGAAGUCGGCAAAAUGGAUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18089 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61865872-61865930 | + | 364 | 0.39 | CUUUGUCGCUUCGAUUCAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18091 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61914511-61916308 | - | 15,536 | 16.78 | CUGCUCGUCCCUACUGCCGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18092 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61920320-61920596 | - | 1,202 | 1.30 | CUGAAUCGAGAGCUCCAAGUGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-18094 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61993562-61994453 | - | 11,998 | 12.96 | CUGUUGAGCUUGACUCUAGUCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18095 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:61994513-61994693 | - | 997 | 1.08 | CAAGGGAAGUCGGCAAAAUGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18096 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62003905-62004186 | - | 976 | 1.05 | AUUGCAAUUGUUGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18097 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62023784-62024323 | + | 2,749 | 2.97 | AAGGAUCAUUGUCGAAACCUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18098 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62024591-62024761 | + | 19,731 | 21.31 | AACUACUCUCGGCAACGGAUAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18099 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62024968-62025043 | + | 1,504 | 1.63 | GCGACCCCAGGUCAGGCGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18100 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62025170-62025530 | + | 4,987 | 5.39 | GCUUGAAAUUGUCGGGAGGGAAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18101 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62025621-62027394 | + | 11,158 | 12.05 | CAUUUUUGGUAAGCAGAACUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18102 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62027563-62028403 | + | 10,895 | 11.77 | CGUGGCCUAUCGAUCCUUUAGACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18104 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62050503-62051868 | + | 19,685 | 21.26 | AAGACGAACAACUGCGAAAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18105 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62051920-62052004 | + | 71 | 0.08 | AAAGAGUGCUUGAAAUUGUCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18106 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62052137-62052540 | + | 3,103 | 3.35 | AUGGUGAGCUAUGCCUGAGCGG | | OtherRNA | ShortStack |
| ghr-b1.1r1-18107 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62057545-62058208 | + | 3,926 | 4.24 | UGGUCAUGGAAGUCGAAAUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18108 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62058312-62058712 | + | 7,256 | 7.84 | AUCCGUAACCUCGGGAAAAGGAUUGGCUCUGAGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18109 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62059202-62059859 | + | 2,382 | 2.57 | AUCGAUAGGCCACGCUUUCACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18110 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62059981-62060118 | + | 2,912 | 3.15 | UUUUGUCGCUUCGAUUCGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18111 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62066608-62067881 | + | 5,995 | 6.48 | GGUGUGUACAAAGGGCAGGGAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18112 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62068080-62068328 | + | 4,957 | 5.36 | CACGUCUGCCUGGGAGUCACGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18113 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62068580-62069200 | + | 1,122 | 1.21 | AAAGGACUUUGAAAAGAGAGUCAAAGAGUGCUUGAAAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18114 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62069305-62071534 | + | 21,593 | 23.33 | UCUCGUGUGGAACAAAAGGGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18115 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62089161-62089362 | + | 4,866 | 5.26 | AUGAACAAAUUCAGACUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18116 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62091373-62091477 | + | 793 | 0.86 | UGAUAACUCGACGGAUCGCAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18117 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62091627-62091927 | + | 6,859 | 7.41 | CUCGUAGUUGGACUUAGGGGUGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18118 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62094065-62094325 | + | 461 | 0.50 | UCGCUCCUACCGAUUGAAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18119 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62094637-62094803 | + | 2,981 | 3.22 | ACACGUCUGCCUGGGUGUCACGC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18120 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62095029-62095417 | + | 1,079 | 1.17 | GUAGUCUGGAGAAGCGUCCUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18121 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62095471-62096416 | + | 6,946 | 7.50 | AUUUUUGGUAAGCAGAACUGGCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18122 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62096651-62097141 | + | 1,680 | 1.82 | GGGUUAAAAUUCCUGAACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18123 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62097375-62097946 | + | 11,087 | 11.98 | UGGGGAGUUUGGCUGGGGCGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18125 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62107402-62107581 | + | 4,450 | 4.81 | AACGACUCUCGGCAACGGAUAUCUCGGCUCUCGCAUCGAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18126 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62107903-62108115 | + | 1,092 | 1.18 | UUAGUCUGGAGAAGCGUCCUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18127 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62108272-62108538 | + | 1,608 | 1.74 | UCGGAUGUGGAACGGCGAGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18128 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62108673-62108785 | + | 5,594 | 6.04 | AUGCCUGUCGGGACCCGAAAGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18129 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62110131-62110761 | + | 5,607 | 6.06 | UCGACUCAGAACUGGUACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18130 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62111086-62111344 | + | 4,422 | 4.78 | UCCAGUACGAAUACGAACCAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18131 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62112753-62113026 | + | 1,301 | 1.41 | UCCGGGCUAGAAGCGACGCACGCGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18132 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62121265-62121499 | + | 1,186 | 1.28 | GAUAAAAGGUCGACA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18133 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62121623-62121760 | . | 2,144 | 2.32 | AAUAACAAUACCGGGCUCUAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18135 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62122675-62122769 | + | 2,735 | 2.95 | AUUCCGUUAACGAACGAGACU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18136 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62124936-62125566 | + | 9,381 | 10.13 | UGCGUGCUCCGGGCGUCGGCCUGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18137 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62129700-62130376 | + | 10,598 | 11.45 | AUUCCUGAACCGGGACGCGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18138 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62130723-62130991 | . | 3,857 | 4.17 | CUUUAGACCUUCGGAAUUUGAAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18140 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62131256-62131298 | + | 1,271 | 1.37 | UAUCGUGCGCUGGAUUAUGAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18141 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62141004-62141224 | . | 1,725 | 1.86 | UGAGUCUGGUAAUUGGAAUGAA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18142 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62141573-62141720 | + | 1,370 | 1.48 | UCCUAUUGUGUUGGCCUUCGGGAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18143 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62143353-62143753 | + | 1,396 | 1.51 | AGGAUUCCCCUAGUAACGGCGAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18144 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62143873-62144005 | + | 1,114 | 1.20 | UGCGUGCUCCGGGCGUCGGCCUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18145 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62144511-62144661 | + | 918 | 0.99 | CCAUUUUUGGUAAGCAGAAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18146 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62144810-62145197 | + | 3,278 | 3.54 | UUCAAAUGAGAACUUUGAAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18147 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62145409-62145791 | + | 3,685 | 3.98 | CCGACUGUUUAAUUAAAACAAAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18148 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62146022-62146257 | . | 2,114 | 2.28 | CCGUGAAUCGGAGGCGGGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18149 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62146532-62146715 | + | 852 | 0.92 | CAAUUGGUCAUCGCGCUUGGUC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18150 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62152425-62152539 | + | 2,056 | 2.22 | CACCGGUCUGCUUGUCCCUAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18151 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62153135-62153238 | + | 995 | 1.08 | UAACAGGUCUGUGAUGCCCUUAGAUGUUCUGGGCCGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18152 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62153391-62153529 | + | 1,082 | 1.17 | CACACCGCCCGUCGCUCCUAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18153 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62154513-62155206 | + | 4,714 | 5.09 | AUGCCUGAGCGGGGCGAAGCCAGAGGAAACUCUGGUGGAGGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18154 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62155366-62155642 | + | 2,348 | 2.54 | UGGUAAGCAGAACUGGCGAUGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18155 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62156008-62156459 | + | 1,890 | 2.04 | CUUCCCCCGUCUCUUAGGAUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18156 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62156548-62156625 | + | 374 | 0.40 | AGGAUUGGCUCUGAGGGCUGGGCACGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18157 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62156959-62157311 | + | 3,137 | 3.39 | GACGGACUGGGAACGGCUCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18158 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62158767-62159305 | . | 2,068 | 2.23 | UUACCACAGGGAUAACUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18159 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62169883-62170007 | + | 275 | 0.30 | UAAAAGGUCGACGCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18160 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62170195-62170308 | . | 483 | 0.52 | AUUACCAGACUCAUAGAGCCCA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18161 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62171171-62171598 | + | 9,713 | 10.49 | AAUAACAGGUCUGUGAUGCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18162 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62172322-62172541 | + | 448 | 0.48 | UCCCCUGGAAAGGGGCGCCGGAGAGGGUGAGAGCCCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18163 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62172804-62172969 | + | 9,080 | 9.81 | GCCUCGAUCGUGGGAUUCAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18164 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62173172-62173347 | + | 922 | 1.00 | CUCGACCUAUUCUCAAACUUUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18166 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62174164-62174615 | + | 9,809 | 10.60 | CCGACUGUUUAAUUAAAACAAAGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18167 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62174780-62174871 | + | 987 | 1.07 | CCAAGGGAACGGGCUUGGCAGAAC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18168 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62175044-62175311 | + | 8,028 | 8.67 | CUCGUUUGAUUCUGAUUUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18169 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62176053-62176299 | + | 2,625 | 2.84 | GGUAGAAUCCUUUGCAGACGACC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18170 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62189262-62189319 | + | 866 | 0.94 | CAAUAACAGGCCUGUGAUGCC | | OtherRNA | ShortStack |
| ghr-b1.1r1-18171 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62189959-62190092 | + | 9,308 | 10.05 | AAAACGACUCUCGGCAACGGAU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18172 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62191531-62191637 | + | 191 | 0.21 | ACGGCGAGCGAACCGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18173 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62191738-62191852 | . | 203 | 0.22 | CUACGAGUCGGGUUGUUUGGGAAUGCAGCCG | | OtherRNA | ShortStack |
| ghr-b1.1r1-18174 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62192045-62192347 | + | 5,551 | 6.00 | UGCCUGUCGGGACCCGAAAGAUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18175 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62192431-62193311 | + | 11,702 | 12.64 | CACGGAAUCGAGAGCUCCAAGUA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18176 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62193612-62194175 | + | 6,312 | 6.82 | UUGUCAGGUGGGGAGUUUGGU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18177 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62194567-62194696 | . | 520 | 0.56 | CUAGCCCGGAUUCUGACUUAGAGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18179 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62211555-62211732 | + | 1,555 | 1.68 | UAAAAGGUCGACGCGGA | | OtherRNA | ShortStack |
| ghr-b1.1r1-18180 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62212481-62212646 | + | 1,410 | 1.52 | AAUGACUCUCGGCAACGGAUAUCU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18181 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62212901-62213245 | + | 2,247 | 2.43 | AUUGUAGUCUGGAGAAGCGUU | | OtherRNA | ShortStack |
| ghr-b1.1r1-18182 | Gossypium hirsutum (Upland Cotton) 1.1 | A05:62215966-62216170 | + | 1,954 | 2.11 | CGCCGACGUCUCCGGACUCCA | | OtherRNA | ShortStack |
Data from Lunardon et al. (2020)