| Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
|---|
| can-b1.6r1-10510 | Capsicum annuum (Pepper) 1.6 | chr01:493222-493420 | - | 1,025,883 | 1,439.93 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| can-b1.6r1-12842 | Capsicum annuum (Pepper) 1.6 | chr01:17175616-17175727 | + | 1,206 | 1.69 | AGAUUUGAGAACCUGAGGGUU | | MIRNA | ShortStack |
| can-b1.6r1-13464 | Capsicum annuum (Pepper) 1.6 | chr01:27166057-27166151 | - | 945 | 1.33 | UAUUGGCCUGGUUCACUCAGA | miR171 | MIRNA | ShortStack |
| can-b1.6r1-15252 | Capsicum annuum (Pepper) 1.6 | chr01:81116291-81116535 | - | 20,638 | 28.97 | UUCGGCUCAUCGUUGUUGCAGACG | | MIRNA | ShortStack |
| can-b1.6r1-16932 | Capsicum annuum (Pepper) 1.6 | chr01:208787417-208787551 | - | 135,460 | 190.13 | UUAGAUUCACGCACAAACUCG | miR403 | MIRNA | ShortStack |
| can-b1.6r1-19793 | Capsicum annuum (Pepper) 1.6 | chr01:303173453-303173600 | + | 117,957 | 165.56 | UCGCUUGGUGCAGGUCGGGAC | miR168 | MIRNA | ShortStack |
| can-b1.6r1-20181 | Capsicum annuum (Pepper) 1.6 | chr01:306510708-306510892 | + | 18,770 | 26.35 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| can-b1.6r1-20754 | Capsicum annuum (Pepper) 1.6 | chr02:4461843-4461915 | - | 628 | 0.88 | UAUUGGCCUGGUUCACUCAGA | miR171 | MIRNA | ShortStack |
| can-b1.6r1-24787 | Capsicum annuum (Pepper) 1.6 | chr02:152119244-152119413 | - | 4,006 | 5.62 | UAUUGGCCUGGUUCACUCAGA | miR171 | MIRNA | ShortStack |
| can-b1.6r1-25492 | Capsicum annuum (Pepper) 1.6 | chr02:157306012-157306126 | - | 43,495 | 61.05 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | ShortStack |
| can-b1.6r1-28950 | Capsicum annuum (Pepper) 1.6 | chr03:16144978-16145275 | + | 3,172 | 4.45 | UCUUGGUCAAUCAAUUGUAUC | | MIRNA | ShortStack |
| can-b1.6r1-29362 | Capsicum annuum (Pepper) 1.6 | chr03:21431648-21431749 | - | 116,554 | 163.60 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | ShortStack |
| can-b1.6r1-31198 | Capsicum annuum (Pepper) 1.6 | chr03:143545619-143545720 | + | 61,026 | 85.66 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | ShortStack |
| can-b1.6r1-31221 | Capsicum annuum (Pepper) 1.6 | chr03:145850513-145850599 | + | 4,499 | 6.32 | GAUCAUGUGGCAGCAUCACC | miR167 | MIRNA | ShortStack |
| can-b1.6r1-31774 | Capsicum annuum (Pepper) 1.6 | chr03:219314092-219314191 | + | 1,717 | 2.41 | GGGCGACUCUCUAUUGGCAUG | miR399 | MIRNA | ShortStack |
| can-b1.6r1-31803 | Capsicum annuum (Pepper) 1.6 | chr03:221220789-221220995 | - | 101,831 | 142.93 | UUCAGGCCUGAGAAACGAAAAACU | | MIRNA | ShortStack |
| can-b1.6r1-31961 | Capsicum annuum (Pepper) 1.6 | chr03:230006712-230006913 | - | 10,039 | 14.09 | UCCAAAGGGAUCGCAUUGAUCC | miR393 | MIRNA | ShortStack |
| can-b1.6r1-32657 | Capsicum annuum (Pepper) 1.6 | chr03:249358808-249358926 | - | 21,277 | 29.86 | CGUGAUAUUGGUUCGGCUCACU | | MIRNA | ShortStack |
| can-b1.6r1-32737 | Capsicum annuum (Pepper) 1.6 | chr03:249936871-249937014 | + | 3,306,158 | 4,640.51 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| can-b1.6r1-33323 | Capsicum annuum (Pepper) 1.6 | chr03:256979888-256979974 | + | 798 | 1.12 | UGCUUGUAGUAACUAUGGUAA | | MIRNA | ShortStack |
| can-b1.6r1-33513 | Capsicum annuum (Pepper) 1.6 | chr03:258571150-258571344 | - | 6,787 | 9.53 | UGUUGGAACGGCUCAAUCAAA | miR171 | MIRNA | ShortStack |
| can-b1.6r1-34245 | Capsicum annuum (Pepper) 1.6 | chr03:267603537-267603645 | + | 14,710 | 20.65 | UCGAUAAACCUCUGCAUCCAG | miR162 | MIRNA | ShortStack |
| can-b1.6r1-34344 | Capsicum annuum (Pepper) 1.6 | chr03:268472905-268473081 | - | 848 | 1.19 | UCGAUAAACCUCUGCAUCCAG | miR162 | MIRNA | ShortStack |
| can-b1.6r1-34352 | Capsicum annuum (Pepper) 1.6 | chr03:268574533-268574656 | - | 36,085 | 50.65 | UCGAUAAACCUCUGCAUCCAG | miR162 | MIRNA | ShortStack |
| can-b1.6r1-34364 | Capsicum annuum (Pepper) 1.6 | chr03:268721947-268722035 | - | 2,509 | 3.52 | CUACCAACUCCACCCAUUCCUG | | MIRNA | ShortStack |
| can-b1.6r1-35282 | Capsicum annuum (Pepper) 1.6 | chr03:277524872-277525001 | + | 21,497 | 30.17 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | ShortStack |
| can-b1.6r1-35299 | Capsicum annuum (Pepper) 1.6 | chr03:277675918-277676165 | + | 604,756 | 848.83 | UUUGGAUUGAAGGGAGCUCUA | miR159 | MIRNA | ShortStack |
| can-b1.6r1-37567 | Capsicum annuum (Pepper) 1.6 | chr04:27359073-27359236 | - | 6,873 | 9.65 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | ShortStack |
| can-b1.6r1-37670 | Capsicum annuum (Pepper) 1.6 | chr04:36152810-36153010 | - | 6,139 | 8.62 | AUGGAUGAACAAUGCUGAAACAUU | | MIRNA | ShortStack |
| can-b1.6r1-38640 | Capsicum annuum (Pepper) 1.6 | chr04:183013597-183013746 | - | 24,255 | 34.04 | UCUUACCGAUACCUCCCAUUCC | | MIRNA | ShortStack |
| can-b1.6r1-38717 | Capsicum annuum (Pepper) 1.6 | chr04:187884810-187885087 | - | 45,676 | 64.11 | UUUCCAAUUCCACCCAUUCCUA | miR482 | MIRNA | ShortStack |
| can-b1.6r1-43111 | Capsicum annuum (Pepper) 1.6 | chr05:7683334-7683602 | + | 4,217 | 5.92 | AGAAUCUUGAUGAUGCUGCAG | miR172 | MIRNA | ShortStack |
| can-b1.6r1-44454 | Capsicum annuum (Pepper) 1.6 | chr05:45564958-45565045 | + | 7,973 | 11.19 | UUUCCAAAAUCUUAUGACAAG | | MIRNA | ShortStack |
| can-b1.6r1-47284 | Capsicum annuum (Pepper) 1.6 | chr05:237652831-237653091 | - | 9,381 | 13.17 | AGAAUCUUGAUGCUGCUGCAU | miR172 | MIRNA | ShortStack |
| can-b1.6r1-47426 | Capsicum annuum (Pepper) 1.6 | chr05:238245087-238245225 | - | 21,596 | 30.31 | UGCCUGGCUCCCUGUAUGCCA | miR160 | MIRNA | ShortStack |
| can-b1.6r1-48450 | Capsicum annuum (Pepper) 1.6 | chr06:10946637-10946931 | + | 39,102 | 54.88 | UUUGGAUGUGCACAAGUAGACCCU | | MIRNA | ShortStack |
| can-b1.6r1-49043 | Capsicum annuum (Pepper) 1.6 | chr06:42707333-42707438 | + | 130,785 | 183.57 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| can-b1.6r1-49314 | Capsicum annuum (Pepper) 1.6 | chr06:101485143-101485231 | - | 4,166 | 5.85 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| can-b1.6r1-49805 | Capsicum annuum (Pepper) 1.6 | chr06:163805260-163805444 | - | 85,564 | 120.10 | ACGCAGGAGAGAUGAUGCUGGA | miR391 | MIRNA | ShortStack |
| can-b1.6r1-51773 | Capsicum annuum (Pepper) 1.6 | chr06:222814158-222814260 | - | 388,120 | 544.76 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | ShortStack |
| can-b1.6r1-52400 | Capsicum annuum (Pepper) 1.6 | chr06:230163872-230164027 | - | 5,441 | 7.64 | UGAUAGCCAAGGAUGACUGGU | | MIRNA | ShortStack |
| can-b1.6r1-53937 | Capsicum annuum (Pepper) 1.6 | chr06:240767473-240767609 | - | 7,632 | 10.71 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | ShortStack |
| can-b1.6r1-55059 | Capsicum annuum (Pepper) 1.6 | chr07:9160426-9160549 | - | 1,017 | 1.43 | CAUGUUGCUCGGACUCUACA | | MIRNA | ShortStack |
| can-b1.6r1-55125 | Capsicum annuum (Pepper) 1.6 | chr07:9790727-9790887 | - | 18,630 | 26.15 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | ShortStack |
| can-b1.6r1-55235 | Capsicum annuum (Pepper) 1.6 | chr07:11227212-11227428 | - | 1,499 | 2.10 | GACUGGAUACAAUUGUAGAACAUU | | MIRNA | ShortStack |
| can-b1.6r1-55824 | Capsicum annuum (Pepper) 1.6 | chr07:29086928-29087135 | - | 93,736 | 131.57 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | ShortStack |
| can-b1.6r1-58129 | Capsicum annuum (Pepper) 1.6 | chr07:228422819-228422899 | - | 4,588 | 6.44 | ACCCCUGUGAGGACUACCAAACUU | | MIRNA | ShortStack |
| can-b1.6r1-59530 | Capsicum annuum (Pepper) 1.6 | chr07:243167883-243168096 | - | 171,838 | 241.19 | AUUGAGUGCAGCGUUGAUGAC | miR397 | MIRNA | ShortStack |
| can-b1.6r1-61699 | Capsicum annuum (Pepper) 1.6 | chr08:113569234-113569381 | - | 3,444 | 4.83 | UGGCAAGCAUCUUUGGCAACU | miR169 | MIRNA | ShortStack |
| can-b1.6r1-62103 | Capsicum annuum (Pepper) 1.6 | chr08:126474910-126475044 | + | 3,425 | 4.81 | AUUUGGAGAUGUCAGGUAGGAAGC | | MIRNA | ShortStack |
| can-b1.6r1-62517 | Capsicum annuum (Pepper) 1.6 | chr08:136685308-136685562 | + | 265,722 | 372.97 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | ShortStack |
| can-b1.6r1-62773 | Capsicum annuum (Pepper) 1.6 | chr08:139255441-139255695 | + | 23,408 | 32.86 | UAGAGUGGCCACAACUAGAUG | | MIRNA | ShortStack |
| can-b1.6r1-66008 | Capsicum annuum (Pepper) 1.6 | chr09:162147116-162147233 | - | 6,152 | 8.64 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | ShortStack |
| can-b1.6r1-66681 | Capsicum annuum (Pepper) 1.6 | chr09:244266115-244266238 | + | 8,523 | 11.96 | UUGAGCCGCGCCAAUAUCACG | miR171 | MIRNA | ShortStack |
| can-b1.6r1-68308 | Capsicum annuum (Pepper) 1.6 | chr09:269862993-269863150 | + | 49,135 | 68.97 | UUGACAGAAGAGAGUGAGCAU | miR156 | MIRNA | ShortStack |
| can-b1.6r1-68462 | Capsicum annuum (Pepper) 1.6 | chr09:270522175-270522417 | - | 25,241 | 35.43 | UUCCACAGCUUUCUUGAACUA | miR396 | MIRNA | ShortStack |
| can-b1.6r1-69082 | Capsicum annuum (Pepper) 1.6 | chr10:3460349-3460593 | + | 1,303 | 1.83 | UUCUAGGGUUCUAGCAAGUUGACC | | MIRNA | ShortStack |
| can-b1.6r1-71037 | Capsicum annuum (Pepper) 1.6 | chr10:161246618-161246759 | - | 10,968 | 15.40 | AAGCUCAGGAGGGAUAGCACC | miR390 | MIRNA | ShortStack |
| can-b1.6r1-71581 | Capsicum annuum (Pepper) 1.6 | chr10:195825562-195825710 | - | 6,194 | 8.69 | UGGAGAAGCAGGGCGCGUGCA | miR164 | MIRNA | ShortStack |
| can-b1.6r1-72111 | Capsicum annuum (Pepper) 1.6 | chr10:214920966-214921070 | - | 5,777 | 8.11 | UGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | ShortStack |
| can-b1.6r1-73770 | Capsicum annuum (Pepper) 1.6 | chr10:231582955-231583130 | + | 1,812 | 2.54 | UCAGAAUAUGAUGAUGUGAGCUU | | MIRNA | ShortStack |
| can-b1.6r1-75768 | Capsicum annuum (Pepper) 1.6 | chr11:18228932-18229159 | - | 9,263 | 13.00 | UGCACGCAAGAUGGUCCGGACA | | MIRNA | ShortStack |
| can-b1.6r1-77484 | Capsicum annuum (Pepper) 1.6 | chr11:182607605-182607812 | - | 8,979 | 12.60 | UAUGUUCUCAGGUCACCCCUA | | MIRNA | ShortStack |
| can-b1.6r1-77866 | Capsicum annuum (Pepper) 1.6 | chr11:230710139-230710361 | + | 5,069 | 7.12 | ACAUGGGUUAAGUAAAAUGAAACU | | MIRNA | ShortStack |
| can-b1.6r1-79808 | Capsicum annuum (Pepper) 1.6 | chr11:265269883-265269981 | + | 3,187 | 4.47 | UUUGAUGCUCUUUGUUUGACA | | MIRNA | ShortStack |
| can-b1.6r1-79822 | Capsicum annuum (Pepper) 1.6 | chr11:265358160-265358274 | + | 2,401 | 3.37 | UUUGAUGCUCUUUGUUUGACA | | MIRNA | ShortStack |
| can-b1.6r1-79829 | Capsicum annuum (Pepper) 1.6 | chr11:265390103-265390187 | + | 1,143 | 1.60 | UUUGAUGCUCUUUGUUUGACA | | MIRNA | ShortStack |
| can-b1.6r1-80552 | Capsicum annuum (Pepper) 1.6 | chr12:3787630-3787708 | - | 28,952 | 40.64 | UUGCAAACACACCUGAAUCGU | | MIRNA | ShortStack |
| can-b1.6r1-81597 | Capsicum annuum (Pepper) 1.6 | chr12:12376086-12376317 | + | 12,287 | 17.25 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | ShortStack |
| can-b1.6r1-85325 | Capsicum annuum (Pepper) 1.6 | chr12:241989955-241990087 | + | 368,617 | 517.39 | UCGCUUGGUGCAGGUCGGGAC | miR168 | MIRNA | ShortStack |
| can-b1.6r1-2149 | Capsicum annuum (Pepper) 1.6 | PGAv.1.6.scaffold1248:450419-450685 | + | 479,066 | 672.42 | ACGGGGACGAGGCAGAGCAUG | miR408 | MIRNA | ShortStack |
| can-b1.6r1-2151 | Capsicum annuum (Pepper) 1.6 | PGAv.1.6.scaffold1248:480059-480340 | + | 140,527 | 197.24 | ACAGGGACGAGGCAGCGCAUG | miR408 | MIRNA | ShortStack |
| can-b1.6r1-3407 | Capsicum annuum (Pepper) 1.6 | PGAv.1.6.scaffold1459:352010-352234 | + | 166,336 | 233.47 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | ShortStack |
| can-b1.6r1-3962 | Capsicum annuum (Pepper) 1.6 | PGAv.1.6.scaffold1577:321577-321764 | + | 347,787 | 488.15 | UCGGACCAGGCUUCAUUCCUC | miR166 | MIRNA | ShortStack |
| can-b1.6r1-4263 | Capsicum annuum (Pepper) 1.6 | PGAv.1.6.scaffold1646:107016-107186 | + | 398 | 0.56 | AAUUGCAUCUAUCCUAAGAUU | | MIRNA | ShortStack |
| can-b1.6r1-8527 | Capsicum annuum (Pepper) 1.6 | PGAv.1.6.scaffold588:1080834-1081121 | + | 140,873 | 197.73 | UUGCAAACACACCUGAAUCGU | | MIRNA | ShortStack |
| can-b1.6r1-10137 | Capsicum annuum (Pepper) 1.6 | PGAv.1.6.scaffold960:438469-438595 | - | 2,841 | 3.99 | UACUUUGGGUAUUCAUAUGCU | | MIRNA | ShortStack |
Data from Lunardon et al. (2020)