het siRNAsData from Lunardon et al. (2020)miRNA

Annotations viewer

Genome

Phaseolus vulgaris (Common Bean) genome build 1.0 (pvu-b1.0)

Version v1.0 of Phaseolus vulgaris cv. BAT93 from Phytozome

Locus type

Annotation source

Name contains:

Family contains:

NameGenomeCoordinatesStrandReadsRPMMajor RNAFamilyLocus TypeAnnotation Source
pvu-b1.0r1-2860Phaseolus vulgaris (Common Bean) 1.0Chr01:44307842-44308386.3,51219.35CAGUGUGAAUUCUCGAUUUCAAUsiRNA23ShortStack
pvu-b1.0r1-10246Phaseolus vulgaris (Common Bean) 1.0Chr03:12445872-12445941+3401.87AUGAACUGAAUCUCUUGUUGCAGsiRNA23ShortStack
pvu-b1.0r1-13216Phaseolus vulgaris (Common Bean) 1.0Chr03:48471420-48473099-16,53191.06UCGAAUGAAUUCAAGAACAUAUUsiRNA23ShortStack
pvu-b1.0r1-17965Phaseolus vulgaris (Common Bean) 1.0Chr05:20941443-20941467-580.32CACCAAAAGAGCAAAGAACAGCAGsiRNA23ShortStack
pvu-b1.0r1-19233Phaseolus vulgaris (Common Bean) 1.0Chr05:38731328-38731411-1901.05CAAGAAUAAAGAGAUGAACAAACsiRNA23ShortStack
pvu-b1.0r1-26399Phaseolus vulgaris (Common Bean) 1.0Chr07:50204246-50204268+1170.64AUGGAAUGAUGAUAAUGACCGUUsiRNA23ShortStack
pvu-b1.0r1-26758Phaseolus vulgaris (Common Bean) 1.0Chr08:519538-519561+6483.57CUCGAUGAAUGAUUUGCGGUAUAsiRNA23ShortStack
pvu-b1.0r1-33275Phaseolus vulgaris (Common Bean) 1.0Chr09:18321677-18321724+9715.35CGGAAAGGAAGAAACAAAUAUGUsiRNA23ShortStack
pvu-b1.0r1-33993Phaseolus vulgaris (Common Bean) 1.0Chr09:23869386-23869511+5342.94UAGCCAAGGAUGGUUUGCCUAGGsiRNA23ShortStack
pvu-b1.0r1-35234Phaseolus vulgaris (Common Bean) 1.0Chr09:34961315-34961437-3201.76UUGAGCCAAGGAUGGCUUGCCGGmiR169siRNA23ShortStack
pvu-b1.0r1-38502Phaseolus vulgaris (Common Bean) 1.0Chr11:656936-657004-1,0105.56UGAGAUUCUAAAAGUACACUAAUsiRNA23ShortStack
pvu-b1.0r1-38508Phaseolus vulgaris (Common Bean) 1.0Chr11:659021-659197-2,23012.28UUAGGUAGUAUAGAUGAACAACUsiRNA23ShortStack
pvu-b1.0r1-38522Phaseolus vulgaris (Common Bean) 1.0Chr11:748550-748599+1,6268.96UCUGUUGAUUCCAUGGUACGAAGsiRNA23ShortStack