Name | Genome | Coordinates | Strand | Reads | RPM | Major RNA | Family | Locus Type | Annotation Source |
csa-MIR171b-1 | Cucumis sativus (Cucumber) 2 | Chr1:241216-241312 | - | 162,042 | 248.94 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-1 | Cucumis sativus (Cucumber) 2 | Chr1:241216-241312 | - | 162,042 | 248.94 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR162 | Cucumis sativus (Cucumber) 2 | Chr1:2135592-2135705 | - | 106,637 | 163.83 | UCGAUAAACCUCUGCAUCCAG | miR162 | MIRNA | Ling_et_al_2017 |
csa-MIR157-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522422-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156b-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522422-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522422-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156e-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522422-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522423-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522423-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-1 | Cucumis sativus (Cucumber) 2 | Chr1:2522423-2522625 | + | 682,430 | 1,048.41 | GCUCUCUAUGCUUCUGUCAUC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR159a | Cucumis sativus (Cucumber) 2 | Chr1:4427157-4427374 | + | 2,151,646 | 3,305.55 | UUUGGAUUGAAGGGAGCUCUA | miR159 | MIRNA | Ling_et_al_2017 |
csa-MIR159b-1 | Cucumis sativus (Cucumber) 2 | Chr1:4427158-4427373 | + | 2,151,646 | 3,305.55 | UUUGGAUUGAAGGGAGCUCUA | miR159 | MIRNA | Ling_et_al_2017 |
csa-MIR159c | Cucumis sativus (Cucumber) 2 | Chr1:4427158-4427373 | + | 2,151,646 | 3,305.55 | UUUGGAUUGAAGGGAGCUCUA | miR159 | MIRNA | Ling_et_al_2017 |
csa-MIR169b-1 | Cucumis sativus (Cucumber) 2 | Chr1:4895775-4895877 | - | 32,784 | 50.37 | CAGCCAAGGAUGACUUGCCGG | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR397 | Cucumis sativus (Cucumber) 2 | Chr1:7211713-7211804 | + | 23,739 | 36.47 | UCAUUGAGUGCAGCGUUGAUG | miR397 | MIRNA | Ling_et_al_2017 |
csa-MIR172a-1 | Cucumis sativus (Cucumber) 2 | Chr1:8885444-8885563 | - | 48,845 | 75.04 | AGAAUCUUGAUGAUGCUGCAU | miR172 | siRNA21 | Ling_et_al_2017 |
csa-MIR396c-1 | Cucumis sativus (Cucumber) 2 | Chr1:12055083-12055242 | + | 8,784,042 | 13,494.81 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-3 | Cucumis sativus (Cucumber) 2 | Chr1:12055084-12055243 | + | 8,784,041 | 13,494.81 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-1 | Cucumis sativus (Cucumber) 2 | Chr1:12055086-12055241 | + | 8,784,041 | 13,494.81 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-1 | Cucumis sativus (Cucumber) 2 | Chr1:12055088-12055239 | + | 8,784,041 | 13,494.81 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-2 | Cucumis sativus (Cucumber) 2 | Chr1:12055088-12055238 | + | 8,784,041 | 13,494.81 | UUCCACAGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-1 | Cucumis sativus (Cucumber) 2 | Chr1:12061006-12061154 | - | 85,169 | 130.84 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-3 | Cucumis sativus (Cucumber) 2 | Chr1:12061032-12061152 | - | 85,160 | 130.83 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-3 | Cucumis sativus (Cucumber) 2 | Chr1:12061034-12061150 | - | 85,160 | 130.83 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-2 | Cucumis sativus (Cucumber) 2 | Chr1:12065089-12065213 | - | 14,823 | 22.77 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-4 | Cucumis sativus (Cucumber) 2 | Chr1:12065090-12065229 | - | 14,823 | 22.77 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-2 | Cucumis sativus (Cucumber) 2 | Chr1:12065092-12065211 | - | 14,823 | 22.77 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-4 | Cucumis sativus (Cucumber) 2 | Chr1:12065092-12065211 | - | 14,823 | 22.77 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-4 | Cucumis sativus (Cucumber) 2 | Chr1:12065094-12065209 | - | 14,822 | 22.77 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR171c-1 | Cucumis sativus (Cucumber) 2 | Chr1:12101563-12101675 | - | 20,979 | 32.23 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171e-1 | Cucumis sativus (Cucumber) 2 | Chr1:12101563-12101675 | - | 20,979 | 32.23 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-2 | Cucumis sativus (Cucumber) 2 | Chr1:12101566-12101673 | - | 20,979 | 32.23 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-2 | Cucumis sativus (Cucumber) 2 | Chr1:12101566-12101673 | - | 20,979 | 32.23 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR49 | Cucumis sativus (Cucumber) 2 | Chr1:12734567-12734725 | . | 5,901 | 9.07 | GCAGAUGGGCCCAAGCCCAACAGC | | siRNA24 | Ling_et_al_2017 |
csa-MIR169d-1 | Cucumis sativus (Cucumber) 2 | Chr1:15612198-15612290 | + | 9,631 | 14.80 | UGAGCCAAGAAUGACUUGCCGGC | miR169 | siRNA23 | Ling_et_al_2017 |
csa-MIR169e-1 | Cucumis sativus (Cucumber) 2 | Chr1:15612198-15612290 | + | 9,631 | 14.80 | UGAGCCAAGAAUGACUUGCCGGC | miR169 | siRNA23 | Ling_et_al_2017 |
csa-MIR169e-3 | Cucumis sativus (Cucumber) 2 | Chr1:15616415-15616534 | + | 3,861 | 5.93 | UGAGCCAAGGAUGACUUGCCU | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR169e-2 | Cucumis sativus (Cucumber) 2 | Chr1:15616416-15616544 | + | 3,868 | 5.94 | UGAGCCAAGGAUGACUUGCCU | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR399c-2 | Cucumis sativus (Cucumber) 2 | Chr1:16876356-16876492 | - | 636 | 0.98 | UGCCAAAGGAGAAUUGCCCUG | miR399 | siRNA21 | Ling_et_al_2017 |
csa-MIR399c-1 | Cucumis sativus (Cucumber) 2 | Chr1:16879724-16879902 | + | 737 | 1.13 | UGCCAAAGGAGAUUUGCCCGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR390-2 | Cucumis sativus (Cucumber) 2 | Chr1:18956000-18956118 | + | 5,734 | 8.81 | CGCUAUCCAUCCUGAGUUUCA | miR390 | MIRNA | Ling_et_al_2017 |
csa-MIR390-1 | Cucumis sativus (Cucumber) 2 | Chr1:18956001-18956119 | + | 5,734 | 8.81 | CGCUAUCCAUCCUGAGUUUCA | miR390 | MIRNA | Ling_et_al_2017 |
csa-MIR164a-1 | Cucumis sativus (Cucumber) 2 | Chr1:20943619-20943728 | - | 24,045 | 36.94 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-2 | Cucumis sativus (Cucumber) 2 | Chr1:22344995-22345101 | + | 208 | 0.32 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-2 | Cucumis sativus (Cucumber) 2 | Chr1:22344996-22345100 | + | 208 | 0.32 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-2 | Cucumis sativus (Cucumber) 2 | Chr1:22344996-22345100 | + | 208 | 0.32 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR398b-1 | Cucumis sativus (Cucumber) 2 | Chr1:24920789-24920879 | + | 525,458 | 807.26 | UGUGUUCUCAGGUCGCCCCUG | miR398 | MIRNA | Ling_et_al_2017 |
csa-MIR4 | Cucumis sativus (Cucumber) 2 | Chr1:24920790-24920880 | + | 525,446 | 807.24 | UGUGUUCUCAGGUCGCCCCUG | miR398 | MIRNA | Ling_et_al_2017 |
csa-MIR24 | Cucumis sativus (Cucumber) 2 | Chr1:25014757-25014866 | + | 39,837 | 61.20 | GCCCUUCGUUGCUCCGAUUCGA | | OtherRNA | Ling_et_al_2017 |
csa-MIR22 | Cucumis sativus (Cucumber) 2 | Chr1:26812283-26812399 | + | 60,701 | 93.25 | GGGCUAUUAGCUCAGUGG | | OtherRNA | Ling_et_al_2017 |
csa-MIR167a-1 | Cucumis sativus (Cucumber) 2 | Chr1:28512214-28512456 | - | 338,605 | 520.20 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-1 | Cucumis sativus (Cucumber) 2 | Chr1:28512214-28512456 | - | 338,605 | 520.20 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-1 | Cucumis sativus (Cucumber) 2 | Chr1:28512214-28512456 | - | 338,605 | 520.20 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR171c-2 | Cucumis sativus (Cucumber) 2 | Chr2:1330897-1331012 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171e-2 | Cucumis sativus (Cucumber) 2 | Chr2:1330897-1331012 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR12 | Cucumis sativus (Cucumber) 2 | Chr2:1330903-1331011 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-3 | Cucumis sativus (Cucumber) 2 | Chr2:1330904-1331009 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-3 | Cucumis sativus (Cucumber) 2 | Chr2:1330904-1331009 | + | 12,776 | 19.63 | UUGAGCCGCGCCAAUAUCACU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-7 | Cucumis sativus (Cucumber) 2 | Chr2:1364488-1364840 | + | 914,079 | 1,404.29 | UUCCACAGCUUUCUUGAACUU | miR396 | siRNA21 | Ling_et_al_2017 |
csa-MIR7 | Cucumis sativus (Cucumber) 2 | Chr2:1364800-1364959 | + | 987,585 | 1,517.21 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-5 | Cucumis sativus (Cucumber) 2 | Chr2:1364800-1364958 | + | 987,585 | 1,517.21 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-5 | Cucumis sativus (Cucumber) 2 | Chr2:1364802-1364956 | + | 987,584 | 1,517.21 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-6 | Cucumis sativus (Cucumber) 2 | Chr2:1364802-1364956 | + | 987,584 | 1,517.21 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-6 | Cucumis sativus (Cucumber) 2 | Chr2:1364803-1364954 | + | 987,583 | 1,517.21 | UUCCACAGCUUUCUUGAACUU | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396c-2 | Cucumis sativus (Cucumber) 2 | Chr2:1372152-1372317 | - | 2,906,337 | 4,464.97 | UUCCACGGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396b-6 | Cucumis sativus (Cucumber) 2 | Chr2:1372152-1372317 | - | 2,906,337 | 4,464.97 | UUCCACGGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396d-7 | Cucumis sativus (Cucumber) 2 | Chr2:1372154-1372315 | - | 2,906,328 | 4,464.96 | UUCCACGGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-7 | Cucumis sativus (Cucumber) 2 | Chr2:1372155-1372313 | - | 2,906,328 | 4,464.96 | UUCCACGGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR396a-5 | Cucumis sativus (Cucumber) 2 | Chr2:1372156-1372314 | - | 2,906,328 | 4,464.96 | UUCCACGGCUUUCUUGAACUG | miR396 | MIRNA | Ling_et_al_2017 |
csa-MIR156b-2 | Cucumis sativus (Cucumber) 2 | Chr2:1701690-1701828 | + | 30,762 | 47.26 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-3 | Cucumis sativus (Cucumber) 2 | Chr2:1701690-1701828 | + | 30,762 | 47.26 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-2 | Cucumis sativus (Cucumber) 2 | Chr2:1701691-1701827 | + | 30,762 | 47.26 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-3 | Cucumis sativus (Cucumber) 2 | Chr2:1701691-1701827 | + | 30,762 | 47.26 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-3 | Cucumis sativus (Cucumber) 2 | Chr2:1701691-1701827 | + | 30,762 | 47.26 | UGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR20 | Cucumis sativus (Cucumber) 2 | Chr2:4667254-4667459 | - | 740 | 1.14 | UCGACCAGGACAAAGACUGAGU | | MIRNA | Ling_et_al_2017 |
csa-MIR169a | Cucumis sativus (Cucumber) 2 | Chr2:4754807-4754944 | - | 139,884 | 214.90 | AAGCCAAGGAUGAAUUGCCGG | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR169b-2 | Cucumis sativus (Cucumber) 2 | Chr2:4754807-4754944 | - | 139,884 | 214.90 | AAGCCAAGGAUGAAUUGCCGG | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR827 | Cucumis sativus (Cucumber) 2 | Chr2:8246016-8246110 | - | 27,978 | 42.98 | UUAGAUGACCAUCAACGAACG | miR827 | MIRNA | Ling_et_al_2017 |
csa-MIR21 | Cucumis sativus (Cucumber) 2 | Chr2:9528123-9528263 | - | 19,987 | 30.71 | AACCCGGGCUCAGACACC | | OtherRNA | Ling_et_al_2017 |
csa-MIR2 | Cucumis sativus (Cucumber) 2 | Chr2:10289959-10290089 | + | 101,526 | 155.97 | UCUCGGACCAGGCUUCAUUC | miR166 | OtherRNA | Ling_et_al_2017 |
csa-MIR166-1 | Cucumis sativus (Cucumber) 2 | Chr2:10289966-10290078 | + | 101,523 | 155.97 | UCUCGGACCAGGCUUCAUUC | miR166 | OtherRNA | Ling_et_al_2017 |
csa-MIR167a-2 | Cucumis sativus (Cucumber) 2 | Chr2:10691119-10691234 | - | 81,967 | 125.93 | UCAAGCUGCCAGCAUGAUCUAA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-2 | Cucumis sativus (Cucumber) 2 | Chr2:10691119-10691234 | - | 81,967 | 125.93 | UCAAGCUGCCAGCAUGAUCUAA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-2 | Cucumis sativus (Cucumber) 2 | Chr2:10691119-10691234 | - | 81,967 | 125.93 | UCAAGCUGCCAGCAUGAUCUAA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167a-3 | Cucumis sativus (Cucumber) 2 | Chr2:11090154-11090254 | - | 122,567 | 188.30 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-3 | Cucumis sativus (Cucumber) 2 | Chr2:11090154-11090254 | - | 122,567 | 188.30 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-3 | Cucumis sativus (Cucumber) 2 | Chr2:11090154-11090254 | - | 122,567 | 188.30 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR2950 | Cucumis sativus (Cucumber) 2 | Chr2:13796310-13796397 | - | 18,120 | 27.84 | UUCCAUCUCUUGCACACUGGA | miR2950 | MIRNA | Ling_et_al_2017 |
csa-MIR1515 | Cucumis sativus (Cucumber) 2 | Chr2:15244628-15244789 | - | 65,395 | 100.47 | UCAUUUUUGCGUGCAAUGAUCC | miR1515 | siRNA22 | Ling_et_al_2017 |
csa-MIR171b-5 | Cucumis sativus (Cucumber) 2 | Chr2:15576606-15576745 | - | 88,123 | 135.38 | UGAUUGAGCCGCGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-5 | Cucumis sativus (Cucumber) 2 | Chr2:15576606-15576745 | - | 88,123 | 135.38 | UGAUUGAGCCGCGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR394-1 | Cucumis sativus (Cucumber) 2 | Chr2:15605355-15605498 | + | 61,571 | 94.59 | UUGGCAUUCUGUCCACCUCC | miR394 | MIRNA | Ling_et_al_2017 |
csa-MIR1 | Cucumis sativus (Cucumber) 2 | Chr2:17333983-17334226 | + | 398,643 | 612.43 | GGGGAUGUAGCUCAGAUG | | OtherRNA | Ling_et_al_2017 |
csa-MIR35 | Cucumis sativus (Cucumber) 2 | Chr2:18796326-18796450 | + | 1,429 | 2.20 | CUAUUGUCUCCAUUAUUUGUGAUA | | MIRNA | Ling_et_al_2017 |
csa-MIR157-2 | Cucumis sativus (Cucumber) 2 | Chr2:19844373-19844486 | + | 126,000 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-4 | Cucumis sativus (Cucumber) 2 | Chr2:19844373-19844486 | + | 126,000 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156e-2 | Cucumis sativus (Cucumber) 2 | Chr2:19844373-19844486 | + | 126,000 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-3 | Cucumis sativus (Cucumber) 2 | Chr2:19844374-19844486 | + | 125,999 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-4 | Cucumis sativus (Cucumber) 2 | Chr2:19844374-19844486 | + | 125,999 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-4 | Cucumis sativus (Cucumber) 2 | Chr2:19844374-19844486 | + | 125,999 | 193.57 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR157-3 | Cucumis sativus (Cucumber) 2 | Chr2:20893451-20893551 | - | 18,757 | 28.82 | UUGACAGAAGAUAGAGGGCAC | miR156 | siRNA21 | Ling_et_al_2017 |
csa-MIR156b-3 | Cucumis sativus (Cucumber) 2 | Chr2:20893451-20893551 | - | 18,757 | 28.82 | UUGACAGAAGAUAGAGGGCAC | miR156 | siRNA21 | Ling_et_al_2017 |
csa-MIR156c-5 | Cucumis sativus (Cucumber) 2 | Chr2:20893451-20893551 | - | 18,757 | 28.82 | UUGACAGAAGAUAGAGGGCAC | miR156 | siRNA21 | Ling_et_al_2017 |
csa-MIR156e-3 | Cucumis sativus (Cucumber) 2 | Chr2:20893451-20893551 | - | 18,757 | 28.82 | UUGACAGAAGAUAGAGGGCAC | miR156 | siRNA21 | Ling_et_al_2017 |
csa-MIR156d-5 | Cucumis sativus (Cucumber) 2 | Chr2:20893452-20893550 | - | 18,743 | 28.80 | UUGACAGAAGAUAGAGGGCAC | miR156 | siRNA21 | Ling_et_al_2017 |
csa-MIR15 | Cucumis sativus (Cucumber) 2 | Chr2:21647093-21647262 | - | 21,154 | 32.50 | UUGAGCCGCGUCAAUAUCUCU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171a | Cucumis sativus (Cucumber) 2 | Chr2:21647105-21647253 | - | 21,153 | 32.50 | UUGAGCCGCGUCAAUAUCUCU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171e-4 | Cucumis sativus (Cucumber) 2 | Chr2:21647105-21647253 | - | 21,153 | 32.50 | UUGAGCCGCGUCAAUAUCUCU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-6 | Cucumis sativus (Cucumber) 2 | Chr2:21647108-21647250 | - | 21,151 | 32.49 | UUGAGCCGCGUCAAUAUCUCU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-6 | Cucumis sativus (Cucumber) 2 | Chr2:21647108-21647250 | - | 21,151 | 32.49 | UUGAGCCGCGUCAAUAUCUCU | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171c-3 | Cucumis sativus (Cucumber) 2 | Chr2:21671416-21671523 | + | 14,548 | 22.35 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171e-3 | Cucumis sativus (Cucumber) 2 | Chr2:21671416-21671523 | + | 14,548 | 22.35 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR30 | Cucumis sativus (Cucumber) 2 | Chr2:21671418-21671522 | + | 14,547 | 22.35 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-4 | Cucumis sativus (Cucumber) 2 | Chr2:21671419-21671520 | + | 14,547 | 22.35 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-4 | Cucumis sativus (Cucumber) 2 | Chr2:21671419-21671520 | + | 14,547 | 22.35 | UUGAGCCGUGCCAAUAUCACG | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR166-2 | Cucumis sativus (Cucumber) 2 | Chr2:22471791-22472067 | - | 48,373 | 74.32 | UCUCGGACCAGGCUUCAUUCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-MIR157-4 | Cucumis sativus (Cucumber) 2 | Chr3:6447668-6447748 | . | 56 | 0.09 | UGACAGAAGAGAGAGAGCAC | miR156 | siRNA21 | Ling_et_al_2017 |
csa-MIR156b-4 | Cucumis sativus (Cucumber) 2 | Chr3:6447668-6447748 | . | 56 | 0.09 | UGACAGAAGAGAGAGAGCAC | miR156 | siRNA21 | Ling_et_al_2017 |
csa-MIR156c-6 | Cucumis sativus (Cucumber) 2 | Chr3:6447668-6447748 | . | 56 | 0.09 | UGACAGAAGAGAGAGAGCAC | miR156 | siRNA21 | Ling_et_al_2017 |
csa-MIR156e-4 | Cucumis sativus (Cucumber) 2 | Chr3:6447668-6447748 | . | 56 | 0.09 | UGACAGAAGAGAGAGAGCAC | miR156 | siRNA21 | Ling_et_al_2017 |
csa-MIR166-4 | Cucumis sativus (Cucumber) 2 | Chr3:6590411-6590517 | - | 22,878 | 35.15 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-MIR319b-1 | Cucumis sativus (Cucumber) 2 | Chr3:6905085-6905300 | + | 2,185 | 3.36 | AUUGGAUUGAAGGGAGCUCC | miR159 | OtherRNA | Ling_et_al_2017 |
csa-MIR159b-2 | Cucumis sativus (Cucumber) 2 | Chr3:6905103-6905299 | + | 2,170 | 3.33 | AUUGGAUUGAAGGGAGCUCC | miR159 | OtherRNA | Ling_et_al_2017 |
csa-MIR32 | Cucumis sativus (Cucumber) 2 | Chr3:7371025-7371206 | - | 10,462 | 16.07 | UGCAGAGGAUGAGGAAAU | | OtherRNA | Ling_et_al_2017 |
csa-MIR166-3 | Cucumis sativus (Cucumber) 2 | Chr3:9416437-9416547 | + | 9,701,533 | 14,904.34 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-MIR45 | Cucumis sativus (Cucumber) 2 | Chr3:10177309-10177597 | - | 870 | 1.34 | UCGGUUGCCUCUAUGUUCUCU | | MIRNA | Ling_et_al_2017 |
csa-MIR393-1 | Cucumis sativus (Cucumber) 2 | Chr3:12618389-12618507 | - | 151,053 | 232.06 | UCCAAAGGGAUCGCAUUGAUC | miR393 | MIRNA | Ling_et_al_2017 |
csa-MIR157-5 | Cucumis sativus (Cucumber) 2 | Chr3:22276608-22276789 | - | 10,462 | 16.07 | UGACAGAAGAUAGAGAGCAC | miR156 | OtherRNA | Ling_et_al_2017 |
csa-MIR156b-5 | Cucumis sativus (Cucumber) 2 | Chr3:22276608-22276789 | - | 10,462 | 16.07 | UGACAGAAGAUAGAGAGCAC | miR156 | OtherRNA | Ling_et_al_2017 |
csa-MIR156c-7 | Cucumis sativus (Cucumber) 2 | Chr3:22276608-22276789 | - | 10,462 | 16.07 | UGACAGAAGAUAGAGAGCAC | miR156 | OtherRNA | Ling_et_al_2017 |
csa-MIR156e-5 | Cucumis sativus (Cucumber) 2 | Chr3:22276608-22276789 | - | 10,462 | 16.07 | UGACAGAAGAUAGAGAGCAC | miR156 | OtherRNA | Ling_et_al_2017 |
csa-MIR156a-4 | Cucumis sativus (Cucumber) 2 | Chr3:22276609-22276788 | - | 10,459 | 16.07 | UGACAGAAGAUAGAGAGCAC | miR156 | OtherRNA | Ling_et_al_2017 |
csa-MIR156d-6 | Cucumis sativus (Cucumber) 2 | Chr3:22276609-22276788 | - | 10,459 | 16.07 | UGACAGAAGAUAGAGAGCAC | miR156 | OtherRNA | Ling_et_al_2017 |
csa-MIR156f-5 | Cucumis sativus (Cucumber) 2 | Chr3:22276609-22276788 | - | 10,459 | 16.07 | UGACAGAAGAUAGAGAGCAC | miR156 | OtherRNA | Ling_et_al_2017 |
csa-MIR36 | Cucumis sativus (Cucumber) 2 | Chr3:22510520-22510738 | . | 143 | 0.22 | UCCUUAUGGGACUUAUGGAUGC | | siRNA24 | Ling_et_al_2017 |
csa-MIR157-6 | Cucumis sativus (Cucumber) 2 | Chr3:22789940-22790046 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156b-6 | Cucumis sativus (Cucumber) 2 | Chr3:22789940-22790046 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-8 | Cucumis sativus (Cucumber) 2 | Chr3:22789940-22790046 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156e-6 | Cucumis sativus (Cucumber) 2 | Chr3:22789940-22790046 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-5 | Cucumis sativus (Cucumber) 2 | Chr3:22789942-22790045 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-7 | Cucumis sativus (Cucumber) 2 | Chr3:22789942-22790045 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-6 | Cucumis sativus (Cucumber) 2 | Chr3:22789942-22790045 | - | 61,066 | 93.82 | UUGACAGAAGAUAGAGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR19 | Cucumis sativus (Cucumber) 2 | Chr3:25994441-25994674 | . | 97,864 | 150.35 | GGGGAUGUAGCUCACA | | OtherRNA | Ling_et_al_2017 |
csa-MIR164a-2 | Cucumis sativus (Cucumber) 2 | Chr3:27316706-27316829 | - | 101,613 | 156.11 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | Ling_et_al_2017 |
csa-MIR390-3 | Cucumis sativus (Cucumber) 2 | Chr3:27385912-27386022 | . | 4,751 | 7.30 | AAGCUCAGGAGGGAUAGCGCC | miR390 | siRNA21 | Ling_et_al_2017 |
csa-MIR390-4 | Cucumis sativus (Cucumber) 2 | Chr3:27385912-27386020 | . | 4,749 | 7.30 | AAGCUCAGGAGGGAUAGCGCC | miR390 | siRNA21 | Ling_et_al_2017 |
csa-MIR2111-1 | Cucumis sativus (Cucumber) 2 | Chr3:27889247-27889348 | + | 45,803 | 70.37 | GCCCUCGGGUCGCAGAUUACC | miR2111 | MIRNA | Ling_et_al_2017 |
csa-MIR42 | Cucumis sativus (Cucumber) 2 | Chr3:28296591-28296725 | . | 2,968 | 4.56 | UUUAGAUCACGCAGAAGAGAC | | siRNA21 | Ling_et_al_2017 |
csa-MIR43 | Cucumis sativus (Cucumber) 2 | Chr3:32649299-32649552 | - | 2,629 | 4.04 | CAGCCAAGGAUGACUUGCCGG | miR169 | OtherRNA | Ling_et_al_2017 |
csa-MIR169d-2 | Cucumis sativus (Cucumber) 2 | Chr3:32649300-32649543 | - | 2,565 | 3.94 | CAGCCAAGGAUGACUUGCCGG | miR169 | OtherRNA | Ling_et_al_2017 |
csa-MIR169e-4 | Cucumis sativus (Cucumber) 2 | Chr3:32649300-32649543 | - | 2,565 | 3.94 | CAGCCAAGGAUGACUUGCCGG | miR169 | OtherRNA | Ling_et_al_2017 |
csa-MIR169b-3 | Cucumis sativus (Cucumber) 2 | Chr3:32649301-32649542 | - | 2,565 | 3.94 | CAGCCAAGGAUGACUUGCCGG | miR169 | OtherRNA | Ling_et_al_2017 |
csa-MIR2911-1 | Cucumis sativus (Cucumber) 2 | Chr3:34651038-34651161 | + | 8,485 | 13.04 | CCCAGUCCCGAACCCGUCGGC | | OtherRNA | Ling_et_al_2017 |
csa-MIR171c-4 | Cucumis sativus (Cucumber) 2 | Chr3:36644841-36644952 | - | 97,566 | 149.89 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-7 | Cucumis sativus (Cucumber) 2 | Chr3:36644844-36644950 | - | 97,559 | 149.88 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-7 | Cucumis sativus (Cucumber) 2 | Chr3:36644844-36644950 | - | 97,559 | 149.88 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR41 | Cucumis sativus (Cucumber) 2 | Chr4:69927-70138 | + | 185 | 0.28 | UAGAAACAAAUGGUGGAGUUCA | | OtherRNA | Ling_et_al_2017 |
csa-MIR169e-5 | Cucumis sativus (Cucumber) 2 | Chr4:1678196-1678323 | + | 3,548 | 5.45 | GGCAGUCUCCUUGGCUAAU | miR169 | OtherRNA | Ling_et_al_2017 |
csa-MIR169c-1 | Cucumis sativus (Cucumber) 2 | Chr4:1678197-1678322 | + | 3,548 | 5.45 | GGCAGUCUCCUUGGCUAAU | miR169 | OtherRNA | Ling_et_al_2017 |
csa-MIR395-1 | Cucumis sativus (Cucumber) 2 | Chr4:3061068-3061424 | . | 32 | 0.05 | CUCAGGCAAGGGGGUUU | | OtherRNA | Ling_et_al_2017 |
csa-MIR168-1 | Cucumis sativus (Cucumber) 2 | Chr4:4716620-4716829 | - | 488,177 | 749.98 | UCGCUUGGUGCAGGUCGGGAA | miR168 | MIRNA | Ling_et_al_2017 |
csa-MIR46 | Cucumis sativus (Cucumber) 2 | Chr4:6339490-6339716 | - | 1,796 | 2.76 | UAGGAGAGCAGCAAAGGCUGG | | MIRNA | Ling_et_al_2017 |
csa-MIR27 | Cucumis sativus (Cucumber) 2 | Chr4:9871376-9871596 | . | 185 | 0.28 | GGAUGGAAGUGACUGUCAUAACAA | | siRNA24 | Ling_et_al_2017 |
csa-MIR168-2 | Cucumis sativus (Cucumber) 2 | Chr4:10111629-10111810 | - | 145,779 | 223.96 | CCCGCCUUGCAUCAACUGAAU | miR168 | MIRNA | Ling_et_al_2017 |
csa-MIR2111-2 | Cucumis sativus (Cucumber) 2 | Chr4:12220916-12221120 | - | 16,581 | 25.47 | UGCAUCCUGAGGUUUAGGGAG | miR2111 | siRNA21 | Ling_et_al_2017 |
csa-MIR390-6 | Cucumis sativus (Cucumber) 2 | Chr4:13051826-13051937 | + | 248,272 | 381.42 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | Ling_et_al_2017 |
csa-MIR390-5 | Cucumis sativus (Cucumber) 2 | Chr4:13051827-13051938 | + | 248,272 | 381.42 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | Ling_et_al_2017 |
csa-MIR164a-3 | Cucumis sativus (Cucumber) 2 | Chr4:13196325-13196555 | + | 54,779 | 84.16 | UGGAGAAGCAGGGCACGUGCU | miR164 | MIRNA | Ling_et_al_2017 |
csa-MIR164b-1 | Cucumis sativus (Cucumber) 2 | Chr4:13196325-13196555 | + | 54,779 | 84.16 | UGGAGAAGCAGGGCACGUGCU | miR164 | MIRNA | Ling_et_al_2017 |
csa-MIR37 | Cucumis sativus (Cucumber) 2 | Chr4:17871372-17871634 | . | 954 | 1.47 | UUGAGAAGUACUGAUAUGGAUGAU | | siRNA24 | Ling_et_al_2017 |
csa-MIR156c-9 | Cucumis sativus (Cucumber) 2 | Chr4:22021965-22022083 | + | 29,127 | 44.75 | GCUUACUCUCUAUCUGUCACC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-6 | Cucumis sativus (Cucumber) 2 | Chr4:22021966-22022080 | + | 29,127 | 44.75 | GCUUACUCUCUAUCUGUCACC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-8 | Cucumis sativus (Cucumber) 2 | Chr4:22021966-22022080 | + | 29,127 | 44.75 | GCUUACUCUCUAUCUGUCACC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-7 | Cucumis sativus (Cucumber) 2 | Chr4:22021966-22022080 | + | 29,127 | 44.75 | GCUUACUCUCUAUCUGUCACC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR157-7 | Cucumis sativus (Cucumber) 2 | Chr4:22620584-22620686 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156c-10 | Cucumis sativus (Cucumber) 2 | Chr4:22620584-22620686 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156e-7 | Cucumis sativus (Cucumber) 2 | Chr4:22620584-22620686 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-7 | Cucumis sativus (Cucumber) 2 | Chr4:22620585-22620685 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-9 | Cucumis sativus (Cucumber) 2 | Chr4:22620585-22620685 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-8 | Cucumis sativus (Cucumber) 2 | Chr4:22620585-22620685 | - | 280,235 | 430.52 | UUGACAGAAGAGAGUGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR394-2 | Cucumis sativus (Cucumber) 2 | Chr4:22864782-22864916 | + | 48,885 | 75.10 | UUGGCAUUCUGUCCACCUCC | miR394 | MIRNA | Ling_et_al_2017 |
csa-MIR166-5 | Cucumis sativus (Cucumber) 2 | Chr5:4265341-4265515 | + | 1,885,460 | 2,896.61 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-MIR33 | Cucumis sativus (Cucumber) 2 | Chr5:4663076-4663229 | + | 1,810,648 | 2,781.68 | UUGGACUGAAGGGAGCUCCC | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR399b-1 | Cucumis sativus (Cucumber) 2 | Chr5:5408038-5408126 | + | 8,376 | 12.87 | AGGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR399a-1 | Cucumis sativus (Cucumber) 2 | Chr5:5408039-5408126 | + | 8,376 | 12.87 | AGGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR5 | Cucumis sativus (Cucumber) 2 | Chr5:5408039-5408127 | + | 8,376 | 12.87 | AGGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR399b-2 | Cucumis sativus (Cucumber) 2 | Chr5:5412590-5412680 | + | 17,001 | 26.12 | GGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR399a-2 | Cucumis sativus (Cucumber) 2 | Chr5:5412592-5412680 | + | 17,001 | 26.12 | GGGCUUCUCUCCAUUGGCAGG | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR169e-7 | Cucumis sativus (Cucumber) 2 | Chr5:7351174-7351291 | - | 3,549 | 5.45 | UAGCCAAAGAUGACUUGCCUGU | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR169c-3 | Cucumis sativus (Cucumber) 2 | Chr5:7351175-7351290 | - | 3,547 | 5.45 | UAGCCAAAGAUGACUUGCCUGU | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR169c-4 | Cucumis sativus (Cucumber) 2 | Chr5:7354642-7354763 | - | 3,970 | 6.10 | UAGCCAAAAAUGACUUGCCUGC | miR169 | siRNA22 | Ling_et_al_2017 |
csa-MIR169c-5 | Cucumis sativus (Cucumber) 2 | Chr5:7359155-7359307 | - | 4,777 | 7.34 | UAGCCAAAAAUGACUUGCCUGC | miR169 | siRNA22 | Ling_et_al_2017 |
csa-MIR169e-6 | Cucumis sativus (Cucumber) 2 | Chr5:7360871-7361014 | + | 1,648 | 2.53 | UGAGCCAAACAUGACUUGCCU | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR169c-2 | Cucumis sativus (Cucumber) 2 | Chr5:7360972-7361201 | + | 4,452 | 6.84 | UAGCCAAAAAUGACUUGCCUGC | miR169 | nearMIRNA | Ling_et_al_2017 |
csa-MIR393-2 | Cucumis sativus (Cucumber) 2 | Chr5:8638527-8638627 | - | 36,708 | 56.39 | UCCAAAGGGAUCGCAUUGAUC | miR393 | MIRNA | Ling_et_al_2017 |
csa-MIR319a-1 | Cucumis sativus (Cucumber) 2 | Chr5:10279763-10280014 | + | 204,875 | 314.75 | CUUGGACUGAAGGGAGCUCCUC | miR319 | OtherRNA | Ling_et_al_2017 |
csa-MIR319b-2 | Cucumis sativus (Cucumber) 2 | Chr5:10279764-10280013 | + | 204,874 | 314.75 | CUUGGACUGAAGGGAGCUCCUC | miR319 | OtherRNA | Ling_et_al_2017 |
csa-MIR31 | Cucumis sativus (Cucumber) 2 | Chr5:10279809-10279980 | + | 6,823 | 10.48 | AACUGCCGACUCAUUCACUCA | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR23 | Cucumis sativus (Cucumber) 2 | Chr5:11943570-11943897 | . | 1,892 | 2.91 | GUGGGCGUGCCGGAGU | | OtherRNA | Ling_et_al_2017 |
csa-MIR858 | Cucumis sativus (Cucumber) 2 | Chr5:12374308-12374428 | - | 28,198 | 43.32 | UCUCGUUGUCUGUUCGACCUUG | miR858 | siRNA22 | Ling_et_al_2017 |
csa-MIR16 | Cucumis sativus (Cucumber) 2 | Chr5:14400726-14400840 | . | 2,265 | 3.48 | AGCAUAAGCAUCCAAUCGAGAGAG | | siRNA24 | Ling_et_al_2017 |
csa-MIR395-2 | Cucumis sativus (Cucumber) 2 | Chr5:17058964-17059090 | + | 467 | 0.72 | GUUCCCUUCCAAACACUUCAGA | miR395 | MIRNA | Ling_et_al_2017 |
csa-MIR395-3 | Cucumis sativus (Cucumber) 2 | Chr5:17071561-17071658 | + | 90 | 0.14 | GUUCCCUUCCAAGCACUUCAGG | miR395 | MIRNA | Ling_et_al_2017 |
csa-MIR172a-2 | Cucumis sativus (Cucumber) 2 | Chr5:18168142-18168241 | + | 22,084 | 33.93 | AGAAUCUUGAUGAUGCUGCAG | miR172 | OtherRNA | Ling_et_al_2017 |
csa-MIR172c-1 | Cucumis sativus (Cucumber) 2 | Chr5:18168143-18168240 | + | 22,084 | 33.93 | AGAAUCUUGAUGAUGCUGCAG | miR172 | OtherRNA | Ling_et_al_2017 |
csa-MIR319a-2 | Cucumis sativus (Cucumber) 2 | Chr5:19951192-19951405 | + | 335,821 | 515.92 | UUGGACUGAAGGGAGCUCCU | miR319 | OtherRNA | Ling_et_al_2017 |
csa-MIR319b-3 | Cucumis sativus (Cucumber) 2 | Chr5:19951193-19951404 | + | 335,820 | 515.92 | UUGGACUGAAGGGAGCUCCU | miR319 | OtherRNA | Ling_et_al_2017 |
csa-MIR10 | Cucumis sativus (Cucumber) 2 | Chr5:19951230-19951374 | + | 150,835 | 231.73 | UGCUGCUCAUUCGUUAGUUCA | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR26 | Cucumis sativus (Cucumber) 2 | Chr5:19951230-19951374 | + | 150,835 | 231.73 | UGCUGCUCAUUCGUUAGUUCA | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR3 | Cucumis sativus (Cucumber) 2 | Chr5:20153611-20153755 | - | 299,333 | 459.86 | UUCCAAGUCCACCCAUGCCCGC | | MIRNA | Ling_et_al_2017 |
csa-MIR408-1 | Cucumis sativus (Cucumber) 2 | Chr5:20905113-20905251 | + | 191,866 | 294.76 | UGCACUGCCUCUUCCCUGGCUG | miR408 | MIRNA | Ling_et_al_2017 |
csa-MIR408-2 | Cucumis sativus (Cucumber) 2 | Chr5:20905113-20905251 | + | 191,866 | 294.76 | UGCACUGCCUCUUCCCUGGCUG | miR408 | MIRNA | Ling_et_al_2017 |
csa-MIR18 | Cucumis sativus (Cucumber) 2 | Chr5:20905120-20905259 | + | 191,864 | 294.76 | UGCACUGCCUCUUCCCUGGCUG | miR408 | MIRNA | Ling_et_al_2017 |
csa-MIR395-5 | Cucumis sativus (Cucumber) 2 | Chr5:22540926-22541033 | - | 1,525 | 2.34 | CUGAAGUGUUUGGGGGAACUC | miR395 | MIRNA | Ling_et_al_2017 |
csa-MIR395-4 | Cucumis sativus (Cucumber) 2 | Chr5:22543353-22543448 | + | 1,651 | 2.54 | AGUUUCCCUGAAUAACUUCAUC | miR395 | MIRNA | Ling_et_al_2017 |
csa-MIR398a | Cucumis sativus (Cucumber) 2 | Chr5:22921418-22921547 | - | 160,822 | 247.07 | UGUGUUCUCAGGUCACCCCUU | miR398 | siRNA21 | Ling_et_al_2017 |
csa-MIR398b-2 | Cucumis sativus (Cucumber) 2 | Chr5:22921419-22921545 | - | 160,819 | 247.06 | UGUGUUCUCAGGUCACCCCUU | miR398 | siRNA21 | Ling_et_al_2017 |
csa-MIR28 | Cucumis sativus (Cucumber) 2 | Chr5:22921421-22921544 | - | 160,818 | 247.06 | UGUGUUCUCAGGUCACCCCUU | miR398 | siRNA21 | Ling_et_al_2017 |
csa-MIR319a-3 | Cucumis sativus (Cucumber) 2 | Chr5:23952464-23952681 | + | 355,922 | 546.80 | UUGGACUGAAGGGAGCUCCC | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR319b-4 | Cucumis sativus (Cucumber) 2 | Chr5:23952464-23952680 | + | 355,922 | 546.80 | UUGGACUGAAGGGAGCUCCC | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR319a-4 | Cucumis sativus (Cucumber) 2 | Chr5:23952482-23952681 | + | 355,920 | 546.80 | UUGGACUGAAGGGAGCUCCC | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR4414 | Cucumis sativus (Cucumber) 2 | Chr5:23952531-23952636 | + | 12,496 | 19.20 | AGCUGCUGACUCGUUGGCUCA | miR319 | MIRNA | Ling_et_al_2017 |
csa-MIR160-1 | Cucumis sativus (Cucumber) 2 | Chr5:24808636-24808735 | + | 40,846 | 62.75 | UGCCUGGCUCCCUGUAUGCCA | miR160 | MIRNA | Ling_et_al_2017 |
csa-MIR13 | Cucumis sativus (Cucumber) 2 | Chr5:26033052-26033168 | + | 12,242 | 18.81 | UCGCAGGAGAGAUGGCACCAAC | | MIRNA | Ling_et_al_2017 |
csa-MIR34 | Cucumis sativus (Cucumber) 2 | Chr5:26041747-26041861 | - | 6,992 | 10.74 | GACCAUUCUCUUGUGACAUA | | MIRNA | Ling_et_al_2017 |
csa-MIR8 | Cucumis sativus (Cucumber) 2 | Chr5:26043755-26043878 | + | 45,179 | 69.41 | CCGCAGGAGAGAUGACACCCAC | | MIRNA | Ling_et_al_2017 |
csa-MIR39 | Cucumis sativus (Cucumber) 2 | Chr5:26309246-26309433 | . | 3,561 | 5.47 | GUUACAUUUAGUGAUAGUUAUGGU | | siRNA24 | Ling_et_al_2017 |
csa-MIR9 | Cucumis sativus (Cucumber) 2 | Chr5:27212125-27212246 | - | 32,411 | 49.79 | UAAGAGCUUCGAUAGUAACAUG | | MIRNA | Ling_et_al_2017 |
csa-MIR6 | Cucumis sativus (Cucumber) 2 | Chr5:27212573-27212691 | - | 52,509 | 80.67 | AACUGCCAUAAUAACAUGAAG | | MIRNA | Ling_et_al_2017 |
csa-MIR11 | Cucumis sativus (Cucumber) 2 | Chr5:27357271-27357399 | + | 4,256 | 6.54 | CGAGGCCUUAGGGGAGAGUACG | miR477 | MIRNA | Ling_et_al_2017 |
csa-MIR393-3 | Cucumis sativus (Cucumber) 2 | Chr6:1038277-1038413 | + | 7,682 | 11.80 | UCCAAAGGGAUCGCAUUGAUC | miR393 | MIRNA | Ling_et_al_2017 |
csa-MIR17 | Cucumis sativus (Cucumber) 2 | Chr6:5846649-5846938 | + | 653 | 1.00 | CACUGAAGGUCUCCGGUUCG | | OtherRNA | Ling_et_al_2017 |
csa-MIR44 | Cucumis sativus (Cucumber) 2 | Chr6:6265223-6265403 | - | 1,600 | 2.46 | UAGCCAAGGAUGACUUGCCUGC | miR169 | MIRNA | Ling_et_al_2017 |
csa-MIR169c-6 | Cucumis sativus (Cucumber) 2 | Chr6:6265336-6265605 | - | 1,163 | 1.79 | UAGCCAAGGAUGACUUGCCUGC | miR169 | nearMIRNA | Ling_et_al_2017 |
csa-MIR169e-8 | Cucumis sativus (Cucumber) 2 | Chr6:6265338-6265604 | - | 1,163 | 1.79 | UAGCCAAGGAUGACUUGCCUGC | miR169 | nearMIRNA | Ling_et_al_2017 |
csa-MIR166-6 | Cucumis sativus (Cucumber) 2 | Chr6:7030263-7030537 | + | 2,586 | 3.97 | UCGGACCAGGCUUCAUUCCCC | miR166 | nearMIRNA | Ling_et_al_2017 |
csa-MIR47 | Cucumis sativus (Cucumber) 2 | Chr6:8596441-8596696 | . | 67 | 0.10 | UUCAACCAGCAAUUGACACGCAU | | OtherRNA | Ling_et_al_2017 |
csa-MIR172a-3 | Cucumis sativus (Cucumber) 2 | Chr6:10216873-10216985 | - | 437,253 | 671.75 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR172c-4 | Cucumis sativus (Cucumber) 2 | Chr6:10216874-10216984 | - | 437,253 | 671.75 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR530 | Cucumis sativus (Cucumber) 2 | Chr6:10267323-10267412 | + | 77,057 | 118.38 | UGCAUUUGCACCUACACCUUC | miR530 | MIRNA | Ling_et_al_2017 |
csa-MIR390-7 | Cucumis sativus (Cucumber) 2 | Chr6:11751221-11751336 | - | 27,997 | 43.01 | AAGCUCAGGAGGGAUAGCGCC | miR390 | MIRNA | Ling_et_al_2017 |
csa-MIR172a-4 | Cucumis sativus (Cucumber) 2 | Chr6:12350306-12350480 | - | 96,288 | 147.93 | GGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR172c-2 | Cucumis sativus (Cucumber) 2 | Chr6:12350306-12350479 | - | 96,288 | 147.93 | GGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR172c-5 | Cucumis sativus (Cucumber) 2 | Chr6:12350307-12350480 | - | 96,288 | 147.93 | GGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR14 | Cucumis sativus (Cucumber) 2 | Chr6:14067645-14067759 | + | 3,646 | 5.60 | UCGCAGAAGAGAUGGUGCCGU | | MIRNA | Ling_et_al_2017 |
csa-MIR156c-11 | Cucumis sativus (Cucumber) 2 | Chr6:16464229-16464382 | - | 495 | 0.76 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156a-8 | Cucumis sativus (Cucumber) 2 | Chr6:16464230-16464381 | - | 495 | 0.76 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156d-10 | Cucumis sativus (Cucumber) 2 | Chr6:16464230-16464381 | - | 495 | 0.76 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR156f-9 | Cucumis sativus (Cucumber) 2 | Chr6:16464230-16464381 | - | 495 | 0.76 | UGACAGAAGAGAGGGAGCAC | miR156 | MIRNA | Ling_et_al_2017 |
csa-MIR40 | Cucumis sativus (Cucumber) 2 | Chr6:16568975-16569231 | . | 1,419 | 2.18 | UUAGCAUGGGCUGUUGGAUGGUU | | siRNA24 | Ling_et_al_2017 |
csa-MIR48 | Cucumis sativus (Cucumber) 2 | Chr6:16956362-16956515 | . | 2,777 | 4.27 | AGAUCAAAGCUCAAAUCGACUUGC | | siRNA24 | Ling_et_al_2017 |
csa-MIR164b-2 | Cucumis sativus (Cucumber) 2 | Chr6:17956729-17956818 | + | 3,869 | 5.94 | UGGAGAGGCAGGGCACAUGCU | miR164 | MIRNA | Ling_et_al_2017 |
csa-MIR29 | Cucumis sativus (Cucumber) 2 | Chr6:17962755-17962945 | + | 40,531 | 62.27 | UAGCCCUUCGUCGCUCCGAUUCGA | | OtherRNA | Ling_et_al_2017 |
csa-MIR160-2 | Cucumis sativus (Cucumber) 2 | Chr6:18254075-18254177 | + | 90,067 | 138.37 | UGCCUGGCUCCCUGUAUGCCA | miR160 | OtherRNA | Ling_et_al_2017 |
csa-MIR172a-5 | Cucumis sativus (Cucumber) 2 | Chr6:18465290-18465432 | - | 315,833 | 485.21 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR172c-3 | Cucumis sativus (Cucumber) 2 | Chr6:18465291-18465431 | - | 315,833 | 485.21 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR172c-6 | Cucumis sativus (Cucumber) 2 | Chr6:18465291-18465431 | - | 315,833 | 485.21 | AGAAUCUUGAUGAUGCUGCAU | miR172 | MIRNA | Ling_et_al_2017 |
csa-MIR166-7 | Cucumis sativus (Cucumber) 2 | Chr6:18652833-18652962 | + | 8,870,707 | 13,627.96 | UCGGACCAGGCUUCAUUCCCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-MIR166-8 | Cucumis sativus (Cucumber) 2 | Chr6:19158799-19158937 | + | 540,746 | 830.74 | UCUCGGACCAGGCUUCAUUCC | miR166 | MIRNA | Ling_et_al_2017 |
csa-MIR38 | Cucumis sativus (Cucumber) 2 | Chr6:19386772-19386913 | - | 7,526 | 11.56 | GUGUGGUUGAUUUGAAACGGGUCUCUGAGGAUU | | OtherRNA | Ling_et_al_2017 |
csa-MIR160-4 | Cucumis sativus (Cucumber) 2 | Chr6:20693682-20693786 | - | 3,443 | 5.29 | UGCCUGGCUCCCUGUAUGCCA | miR160 | OtherRNA | Ling_et_al_2017 |
csa-MIR160-3 | Cucumis sativus (Cucumber) 2 | Chr6:26243532-26243636 | + | 431 | 0.66 | UGCCUGGCUCCCUGAAUGCCAA | miR160 | OtherRNA | Ling_et_al_2017 |
csa-MIR399c-3 | Cucumis sativus (Cucumber) 2 | Chr6:27676182-27676315 | - | 385 | 0.59 | GGGCAAUUACUCUUUUGGCAGA | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR25 | Cucumis sativus (Cucumber) 2 | Chr6:27676184-27676295 | - | 385 | 0.59 | GGGCAAUUACUCUUUUGGCAGA | miR399 | MIRNA | Ling_et_al_2017 |
csa-MIR399b-3 | Cucumis sativus (Cucumber) 2 | Chr6:27678975-27679112 | + | 21,731 | 33.39 | UGCCAAAAGAGACUUGCCCUG | | MIRNA | Ling_et_al_2017 |
csa-MIR399b-4 | Cucumis sativus (Cucumber) 2 | Chr6:27682122-27682211 | + | 3,215 | 4.94 | UGCCAAAAGAGACUUGCCCUG | | MIRNA | Ling_et_al_2017 |
csa-MIR167a-4 | Cucumis sativus (Cucumber) 2 | Chr6:28939468-28939569 | + | 62,091 | 95.39 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-4 | Cucumis sativus (Cucumber) 2 | Chr6:28939468-28939569 | + | 62,091 | 95.39 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-4 | Cucumis sativus (Cucumber) 2 | Chr6:28939468-28939569 | + | 62,091 | 95.39 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR171c-5 | Cucumis sativus (Cucumber) 2 | Chr7:2408681-2408790 | + | 26,265 | 40.35 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171e-5 | Cucumis sativus (Cucumber) 2 | Chr7:2408681-2408790 | + | 26,265 | 40.35 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171b-8 | Cucumis sativus (Cucumber) 2 | Chr7:2408684-2408787 | + | 26,265 | 40.35 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR171d-8 | Cucumis sativus (Cucumber) 2 | Chr7:2408684-2408787 | + | 26,265 | 40.35 | UGAUUGAGCCGUGCCAAUAUC | miR171 | MIRNA | Ling_et_al_2017 |
csa-MIR167a-5 | Cucumis sativus (Cucumber) 2 | Chr7:14051641-14051798 | + | 187,346 | 287.82 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-5 | Cucumis sativus (Cucumber) 2 | Chr7:14051641-14051798 | + | 187,346 | 287.82 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-5 | Cucumis sativus (Cucumber) 2 | Chr7:14051641-14051798 | + | 187,346 | 287.82 | UGAAGCUGCCAGCAUGAUCUA | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167a-6 | Cucumis sativus (Cucumber) 2 | Chr7:14060892-14061000 | + | 735,848 | 1,130.47 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167b-6 | Cucumis sativus (Cucumber) 2 | Chr7:14060892-14061000 | + | 735,848 | 1,130.47 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR167c-6 | Cucumis sativus (Cucumber) 2 | Chr7:14060892-14061000 | + | 735,848 | 1,130.47 | UGAAGCUGCCAGCAUGAUCUG | miR167 | MIRNA | Ling_et_al_2017 |
csa-MIR164a-4 | Cucumis sativus (Cucumber) 2 | Chr7:15347573-15347657 | - | 8,536 | 13.11 | UGGAGAAGCAGGGCACGUGCA | miR164 | MIRNA | Ling_et_al_2017 |
csa-MIR2916 | Cucumis sativus (Cucumber) 2 | Scaffold000130_1:11759-12062 | - | 323,041 | 496.28 | AACGAAAGUUGGGGGCU | | OtherRNA | Ling_et_al_2017 |
csa-MIR2911-2 | Cucumis sativus (Cucumber) 2 | Scaffold000701:335-457 | - | 12,843,780 | 19,731.74 | GCCGGCCGGGGGACGGACUGGG | | OtherRNA | Ling_et_al_2017 |